Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055290 | XP_004516127.1 | 79.310 | 348 | 36 | 1 | 1 | 312 | 1 | 348 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055290 | sp|P52425|GPDA_CUPLA | 72.093 | 344 | 60 | 1 | 2 | 309 | 23 | 366 | 0.0 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055290 | G7L5E8 | 87.608 | 347 | 7 | 1 | 1 | 311 | 1 | 347 | 0.0 | 607 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0681890 | Msa1055290 | 0.800742 | 1.249312e-48 | -8.615850e-47 |
| Msa0432680 | Msa1055290 | 0.801335 | 9.450310e-49 | -8.615850e-47 |
| Msa1014300 | Msa1055290 | 0.823957 | 1.046788e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055290 | MtrunA17_Chr6g0458181 | 74.063 | 347 | 54 | 1 | 2 | 312 | 29 | 375 | 0.0 | 529 |
| Msa1055290 | MtrunA17_Chr7g0226541 | 84.091 | 264 | 8 | 1 | 82 | 311 | 6 | 269 | 1.29e-156 | 438 |
| Msa1055290 | MtrunA17_Chr7g0226531 | 100.000 | 46 | 0 | 0 | 36 | 81 | 1 | 46 | 1.57e-26 | 99.4 |
| Msa1055290 | MtrunA17_Chr5g0428311 | 26.301 | 346 | 192 | 11 | 2 | 306 | 121 | 444 | 1.22e-20 | 91.7 |
| Msa1055290 | MtrunA17_Chr7g0226521 | 96.774 | 31 | 1 | 0 | 1 | 31 | 1 | 31 | 1.76e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055290 | AT5G40610.1 | 70.381 | 341 | 65 | 1 | 2 | 306 | 55 | 395 | 4.66e-175 | 490 |
| Msa1055290 | AT2G40690.3 | 28.205 | 351 | 181 | 13 | 3 | 308 | 89 | 413 | 2.29e-22 | 97.1 |
| Msa1055290 | AT2G40690.1 | 28.205 | 351 | 181 | 13 | 3 | 308 | 89 | 413 | 2.29e-22 | 97.1 |
| Msa1055290 | AT2G40690.2 | 28.571 | 301 | 155 | 11 | 53 | 308 | 27 | 312 | 5.38e-21 | 91.7 |
Find 90 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACAGCTGCTCAACATTT+TGG | 0.082335 | 7_2:-29330340 | None:intergenic |
| ATGTATGTACCTGCAATTTC+TGG | 0.151006 | 7_2:-29329518 | None:intergenic |
| GAGGGGATTTCCCTTGTAAA+AGG | 0.247207 | 7_2:+29327660 | Msa1055290:CDS |
| GTTAAACACATTATTTGTTT+TGG | 0.252934 | 7_2:+29330128 | Msa1055290:three_prime_UTR |
| AGCTACCTCAATTGCTATAT+TGG | 0.279024 | 7_2:-29327769 | None:intergenic |
| GAATTAGAGAATACAGAAAA+AGG | 0.284818 | 7_2:+29330456 | Msa1055290:three_prime_UTR |
| ACAATTGATTCTCAATTGAT+TGG | 0.326950 | 7_2:-29327730 | None:intergenic |
| TGGCAGTGGGTGGAAGAAAT+AGG | 0.331451 | 7_2:+29329054 | Msa1055290:intron |
| ACTAATTTATGAAGGAAGTT+TGG | 0.331664 | 7_2:-29330379 | None:intergenic |
| AATTAACATCGTCATGAATA+AGG | 0.334896 | 7_2:+29325181 | None:intergenic |
| CACAGGTTTGATTGATGGCT+TGG | 0.335494 | 7_2:+29328712 | Msa1055290:intron |
| TACACCACAGCTCTCGAAAA+AGG | 0.341075 | 7_2:-29328921 | None:intergenic |
| CAATTGTTGGTAGTGGCAAT+TGG | 0.348947 | 7_2:+29325207 | Msa1055290:CDS |
| AAAGGCTTGATGGGAAAATA+AGG | 0.364008 | 7_2:+29327628 | Msa1055290:CDS |
| TCACACACAGGTTTGATTGA+TGG | 0.377026 | 7_2:+29328707 | Msa1055290:intron |
| AATTGTTGGTAGTGGCAATT+GGG | 0.390476 | 7_2:+29325208 | Msa1055290:CDS |
| TTTGAGGAAACTTTACCAAA+TGG | 0.412508 | 7_2:+29326689 | Msa1055290:CDS |
| TTGAGGAAACTTTACCAAAT+GGG | 0.415405 | 7_2:+29326690 | Msa1055290:CDS |
| TGTAACACCACATCAATTCA+TGG | 0.415581 | 7_2:+29327593 | Msa1055290:CDS |
| CCAATGACATTCATTCATAA+TGG | 0.421323 | 7_2:-29330183 | None:intergenic |
| CTTGAAGCAGAGTTGCTTGA+AGG | 0.422032 | 7_2:+29329495 | Msa1055290:CDS |
| AGTGAGGATGTGGGTATTTG+AGG | 0.429270 | 7_2:+29326673 | Msa1055290:CDS |
| ATGAATAAGGTCACAATTGT+TGG | 0.434784 | 7_2:+29325194 | Msa1055290:CDS |
| AACTGCAAAAGAGGTTTATG+AGG | 0.435552 | 7_2:+29329826 | Msa1055290:CDS |
| GGAATATGCAAAAGGCTTGA+TGG | 0.438746 | 7_2:+29327618 | Msa1055290:CDS |
| TCTGTGAGCTTATCCCCATT+TGG | 0.439144 | 7_2:-29326704 | None:intergenic |
| TAGTCTGCAATAATGAGAAT+TGG | 0.445774 | 7_2:+29328842 | Msa1055290:intron |
| GCTTGAAGGCCAGAAATTGC+AGG | 0.453051 | 7_2:+29329509 | Msa1055290:CDS |
| TTGATTGATGGCTTGGAGAT+GGG | 0.470990 | 7_2:+29328719 | Msa1055290:CDS |
| CCTTACTGCATGTTGTGATA+AGG | 0.475651 | 7_2:-29328949 | None:intergenic |
| TTCAAAGCTGTTGTTTCCAT+CGG | 0.476460 | 7_2:+29328886 | Msa1055290:CDS |
| GCTGCAGCTTATGCAAGAAA+TGG | 0.476975 | 7_2:+29329083 | Msa1055290:CDS |
| ATATAGGTTCAGGATGTTGA+AGG | 0.485928 | 7_2:+29328387 | Msa1055290:intron |
| CCATTATGAATGAATGTCAT+TGG | 0.487953 | 7_2:+29330183 | Msa1055290:three_prime_UTR |
| AAACAGATGAAGTGAGGATG+TGG | 0.493321 | 7_2:+29326663 | Msa1055290:intron |
| GGGTGTGTTAACTGCAAAAG+AGG | 0.493588 | 7_2:+29329817 | Msa1055290:intron |
| AAAAGGGATGGAGGTCAAGA+AGG | 0.496356 | 7_2:+29327677 | Msa1055290:CDS |
| GAATATGCAAAAGGCTTGAT+GGG | 0.496782 | 7_2:+29327619 | Msa1055290:CDS |
| CACGATCTCTGAGGCTTCCA+CGG | 0.498607 | 7_2:-29329986 | None:intergenic |
| ATTACTGAGCTTGATGGTGT+TGG | 0.499880 | 7_2:-29325258 | None:intergenic |
| AATATAGTGGCTGTAGCTGC+AGG | 0.499969 | 7_2:+29328435 | Msa1055290:CDS |
| ACAGTGTACGAAATCAGTTC+AGG | 0.502109 | 7_2:+29329893 | Msa1055290:CDS |
| AAGGTCACAATTGTTGGTAG+TGG | 0.519310 | 7_2:+29325200 | Msa1055290:CDS |
| AGGGGATTTCCCTTGTAAAA+GGG | 0.521951 | 7_2:+29327661 | Msa1055290:CDS |
| TTTGATTGATGGCTTGGAGA+TGG | 0.522422 | 7_2:+29328718 | Msa1055290:CDS |
| TCATGGAAGGAATATGCAAA+AGG | 0.529586 | 7_2:+29327610 | Msa1055290:CDS |
| ATGCAAGAAATGGCGGAAAG+AGG | 0.532788 | 7_2:+29329093 | Msa1055290:CDS |
| GGCTATCAAGAACCACTAGC+AGG | 0.532913 | 7_2:+29330204 | Msa1055290:three_prime_UTR |
| TATAGGTTCAGGATGTTGAA+GGG | 0.536846 | 7_2:+29328388 | Msa1055290:intron |
| GTGGAAATTACTGAGCTTGA+TGG | 0.538573 | 7_2:-29325264 | None:intergenic |
| ATAGGTTCAGGATGTTGAAG+GGG | 0.542031 | 7_2:+29328389 | Msa1055290:intron |
| TGAGGAAACTTTACCAAATG+GGG | 0.545249 | 7_2:+29326691 | Msa1055290:CDS |
| GAAAATAAGGACAGATGCAG+AGG | 0.546924 | 7_2:+29327641 | Msa1055290:CDS |
| AGCTGTGCTATTTCTAGCGA+AGG | 0.553618 | 7_2:-29330303 | None:intergenic |
| AAGGTACTGTTCTTGACCGA+TGG | 0.556432 | 7_2:-29328902 | None:intergenic |
| GATCCAGACCTTGAAAATGC+AGG | 0.556781 | 7_2:+29326897 | Msa1055290:CDS |
| TAATGTAAACTAATTTATGA+AGG | 0.560560 | 7_2:-29330387 | None:intergenic |
| GGTTCTAACCGCTCGCGGAT+GGG | 0.562201 | 7_2:+29329847 | Msa1055290:CDS |
| TCGTACACTGTTGTGAAGAG+TGG | 0.562292 | 7_2:-29329881 | None:intergenic |
| AATTGGTCTGAAAGAGATGA+TGG | 0.566513 | 7_2:+29328859 | Msa1055290:CDS |
| CAACTATAGCTGATGGTGGA+AGG | 0.570703 | 7_2:-29329919 | None:intergenic |
| GTTGGATGCAACAAGCTTTG+CGG | 0.578402 | 7_2:-29325240 | None:intergenic |
| TATCTCCCCGGAGTCAAGCT+AGG | 0.579382 | 7_2:+29326858 | Msa1055290:CDS |
| CTGTTTCCTGCATGTTGCAG+TGG | 0.580469 | 7_2:-29330090 | None:intergenic |
| GATTTCCCTTGTAAAAGGGA+TGG | 0.582577 | 7_2:+29327665 | Msa1055290:CDS |
| AGTTAAGGATGCAAACATGC+TGG | 0.582609 | 7_2:+29327566 | Msa1055290:intron |
| AACAGATGAAGTGAGGATGT+GGG | 0.594817 | 7_2:+29326664 | Msa1055290:intron |
| TATGAGGTTCTAACCGCTCG+CGG | 0.598782 | 7_2:+29329842 | Msa1055290:CDS |
| TTCCCTTGTAAAAGGGATGG+AGG | 0.612181 | 7_2:+29327668 | Msa1055290:CDS |
| GGGATGGAGGTCAAGAAGGA+AGG | 0.619664 | 7_2:+29327681 | Msa1055290:CDS |
| CGTGGAAGCCTCAGAGATCG+TGG | 0.620253 | 7_2:+29329987 | Msa1055290:three_prime_UTR |
| ATTATATAATTGAAGCTCAG+AGG | 0.622461 | 7_2:+29330022 | Msa1055290:three_prime_UTR |
| AAAATAAGGACAGATGCAGA+GGG | 0.623465 | 7_2:+29327642 | Msa1055290:CDS |
| ACACCACATCAATTCATGGA+AGG | 0.623608 | 7_2:+29327597 | Msa1055290:CDS |
| TTGAATTCAACTATAGCTGA+TGG | 0.625078 | 7_2:-29329926 | None:intergenic |
| GAAAATGTTAAGTATCTCCC+CGG | 0.628065 | 7_2:+29326846 | Msa1055290:CDS |
| AATTCAACTATAGCTGATGG+TGG | 0.631832 | 7_2:-29329923 | None:intergenic |
| GTTGAAGGGGTTGAAATGTG+TGG | 0.634023 | 7_2:+29328402 | Msa1055290:CDS |
| ATTCCTTCCATGAATTGATG+TGG | 0.634753 | 7_2:-29327600 | None:intergenic |
| ATCAAGCTCAGTAATTTCCA+CGG | 0.635426 | 7_2:+29325266 | Msa1055290:CDS |
| GTGTGGAAACAGCCTGCTAG+TGG | 0.636779 | 7_2:-29330216 | None:intergenic |
| ATTGTTGGTAGTGGCAATTG+GGG | 0.639341 | 7_2:+29325209 | Msa1055290:CDS |
| GCAGCTTATGCAAGAAATGG+CGG | 0.641638 | 7_2:+29329086 | Msa1055290:CDS |
| ATATATAAACAGATGAAGTG+AGG | 0.645686 | 7_2:+29326657 | Msa1055290:intron |
| GCAGTGGAAAATGTGTGACT+TGG | 0.666084 | 7_2:-29330074 | None:intergenic |
| TGTACATTAATGATCATCCG+TGG | 0.668360 | 7_2:+29329969 | Msa1055290:three_prime_UTR |
| CCGAGTCGCCACGATCTCTG+AGG | 0.673046 | 7_2:-29329995 | None:intergenic |
| TTTGACCTAGCTTGACTCCG+GGG | 0.673538 | 7_2:-29326863 | None:intergenic |
| AAATAAGGACAGATGCAGAG+GGG | 0.746872 | 7_2:+29327643 | Msa1055290:CDS |
| GACAGCGAATTAAATCATCG+CGG | 0.780070 | 7_2:+29330160 | Msa1055290:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTAACCTTTATTTTT+TGG | + | chr7_2:29327007-29327026 | Msa1055290:intron | 10.0% |
| !!! | AATTTTAACCTTTATTTTTT+GGG | + | chr7_2:29327008-29327027 | Msa1055290:intron | 10.0% |
| !!! | TAATTGTTTAAATTTTTTCA+CGG | - | chr7_2:29328226-29328245 | None:intergenic | 10.0% |
| !!! | TATACATTTTGATAAATTGA+GGG | - | chr7_2:29325388-29325407 | None:intergenic | 15.0% |
| !!! | ATATACATTTTGATAAATTG+AGG | - | chr7_2:29325389-29325408 | None:intergenic | 15.0% |
| !!! | GTAATGTTTTGAAAAAATAA+GGG | - | chr7_2:29327246-29327265 | None:intergenic | 15.0% |
| !!! | TGTAATGTTTTGAAAAAATA+AGG | - | chr7_2:29327247-29327266 | None:intergenic | 15.0% |
| !! | AATGGTTAAATATATAGTTA+AGG | + | chr7_2:29327551-29327570 | Msa1055290:intron | 15.0% |
| !! | TAAATAATCAATGAAATACA+AGG | - | chr7_2:29327836-29327855 | None:intergenic | 15.0% |
| !! | ATTATGATAAATACAAAAAG+TGG | + | chr7_2:29329618-29329637 | Msa1055290:intron | 15.0% |
| !! | TAATGTAAACTAATTTATGA+AGG | - | chr7_2:29330390-29330409 | None:intergenic | 15.0% |
| !!! | ATACATTTTGATAAATTGAG+GGG | - | chr7_2:29325387-29325406 | None:intergenic | 20.0% |
| !!! | AAAAGTTGTTTGATTTTGTT+AGG | + | chr7_2:29325547-29325566 | Msa1055290:intron | 20.0% |
| !! | TATATAGTACATATCTCTAT+CGG | - | chr7_2:29326160-29326179 | None:intergenic | 20.0% |
| !! | TCCAAACATATCATTAAAAT+GGG | - | chr7_2:29326638-29326657 | None:intergenic | 20.0% |
| !! | ATCCAAACATATCATTAAAA+TGG | - | chr7_2:29326639-29326658 | None:intergenic | 20.0% |
| !! | TTAATAATAACTGTTCTTCA+TGG | + | chr7_2:29326820-29326839 | Msa1055290:intron | 20.0% |
| !! | ATTACGTTAATAAGTCAAAT+AGG | + | chr7_2:29327409-29327428 | Msa1055290:intron | 20.0% |
| !!! | AATCAATTGTTCTGTTTTAA+TGG | + | chr7_2:29327743-29327762 | Msa1055290:CDS | 20.0% |
| !!! | ATCAATTGTTCTGTTTTAAT+GGG | + | chr7_2:29327744-29327763 | Msa1055290:CDS | 20.0% |
| !! | TTAAAGTTTCGATACATTTA+AGG | - | chr7_2:29328042-29328061 | None:intergenic | 20.0% |
| !!! | AAACCATGAATTAGATATTT+TGG | + | chr7_2:29328289-29328308 | Msa1055290:intron | 20.0% |
| !! | AAACCAAAATATCTAATTCA+TGG | - | chr7_2:29328295-29328314 | None:intergenic | 20.0% |
| !! | GCTTATGATTTATTTGATAT+AGG | + | chr7_2:29328371-29328390 | Msa1055290:intron | 20.0% |
| !! | ATTAACTTAGATGTTACAAT+TGG | + | chr7_2:29328575-29328594 | Msa1055290:intron | 20.0% |
| !! | CAATAAGAAACAAAAATGAA+GGG | - | chr7_2:29328804-29328823 | None:intergenic | 20.0% |
| !! | ACAATAAGAAACAAAAATGA+AGG | - | chr7_2:29328805-29328824 | None:intergenic | 20.0% |
| !!! | TCATTTTTGTTTCTTATTGT+TGG | + | chr7_2:29328805-29328824 | Msa1055290:intron | 20.0% |
| !!! | AAGGATTAAAACAACAATTT+TGG | - | chr7_2:29328985-29329004 | None:intergenic | 20.0% |
| !!! | ATCCTTCATTTTTTTCTTAT+TGG | + | chr7_2:29328999-29329018 | Msa1055290:intron | 20.0% |
| !! | AACCAATAAGAAAAAAATGA+AGG | - | chr7_2:29329004-29329023 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTATTGGTTATCT+TGG | + | chr7_2:29329008-29329027 | Msa1055290:intron | 20.0% |
| !! | GACTAAAACAATATTATTTG+TGG | + | chr7_2:29329034-29329053 | Msa1055290:intron | 20.0% |
| !!! | TACAGTTTTAAAACATTGAT+TGG | + | chr7_2:29329396-29329415 | Msa1055290:intron | 20.0% |
| !!! | ACAGTTTTAAAACATTGATT+GGG | + | chr7_2:29329397-29329416 | Msa1055290:intron | 20.0% |
| !!! | GTTAAACACATTATTTGTTT+TGG | + | chr7_2:29330128-29330147 | Msa1055290:three_prime_UTR | 20.0% |
| !! | GAAAAAAGATGGATAAATAA+GGG | - | chr7_2:29330435-29330454 | None:intergenic | 20.0% |
| !! | AGAAAAAAGATGGATAAATA+AGG | - | chr7_2:29330436-29330455 | None:intergenic | 20.0% |
| !!! | ACTTTATTTTTTATTCGAGC+AGG | + | chr7_2:29325302-29325321 | Msa1055290:intron | 25.0% |
| !!! | CTTTATTTTTTATTCGAGCA+GGG | + | chr7_2:29325303-29325322 | Msa1055290:intron | 25.0% |
| !!! | GCTTTTGAGAAAATTATGAT+GGG | - | chr7_2:29325365-29325384 | None:intergenic | 25.0% |
| ! | TATCAAAATGTATATTCCGA+TGG | + | chr7_2:29325394-29325413 | Msa1055290:intron | 25.0% |
| !! | TCTTTTGATCAGTCTTTTTT+AGG | + | chr7_2:29325439-29325458 | Msa1055290:intron | 25.0% |
| !!! | CTTTTGATCAGTCTTTTTTA+GGG | + | chr7_2:29325440-29325459 | Msa1055290:intron | 25.0% |
| !!! | TTTTGATCAGTCTTTTTTAG+GGG | + | chr7_2:29325441-29325460 | Msa1055290:intron | 25.0% |
| !! | GATTTTGTTAGGAAAATGAT+AGG | + | chr7_2:29325558-29325577 | Msa1055290:intron | 25.0% |
| !!! | TGATAGGTTCTAAATAAATG+TGG | + | chr7_2:29325574-29325593 | Msa1055290:intron | 25.0% |
| ! | ACAATACACAATGAGAAAAA+AGG | - | chr7_2:29325662-29325681 | None:intergenic | 25.0% |
| !! | TTTTGTACCATAGATAGAAT+TGG | - | chr7_2:29325771-29325790 | None:intergenic | 25.0% |
| !!! | CAAGTGTATTTTTTCAACAT+TGG | - | chr7_2:29325888-29325907 | None:intergenic | 25.0% |
| ! | GTCAAGATATGCATTATATT+CGG | + | chr7_2:29326070-29326089 | Msa1055290:intron | 25.0% |
| ! | CTTCTTACATTTCATAAACA+TGG | + | chr7_2:29326236-29326255 | Msa1055290:intron | 25.0% |
| !! | TAATCATCTTTGTTTGTGAA+TGG | - | chr7_2:29326508-29326527 | None:intergenic | 25.0% |
| ! | AACAAAGATGATTAATTGCA+TGG | + | chr7_2:29326514-29326533 | Msa1055290:intron | 25.0% |
| ! | TTTGTTTAGTTACTGTTTGA+GGG | - | chr7_2:29326586-29326605 | None:intergenic | 25.0% |
| !!! | TTTTGTTTAGTTACTGTTTG+AGG | - | chr7_2:29326587-29326606 | None:intergenic | 25.0% |
| !!! | TCCCATTTTAATGATATGTT+TGG | + | chr7_2:29326634-29326653 | Msa1055290:intron | 25.0% |
| ! | ATATATAAACAGATGAAGTG+AGG | + | chr7_2:29326657-29326676 | Msa1055290:intron | 25.0% |
| ! | GAATATATTGCATATGCAAT+TGG | - | chr7_2:29326774-29326793 | None:intergenic | 25.0% |
| ! | ACTATTTGCCCAAAAAATAA+AGG | - | chr7_2:29327019-29327038 | None:intergenic | 25.0% |
| !!! | TCAGAGACTATTTTAACTAA+TGG | - | chr7_2:29327088-29327107 | None:intergenic | 25.0% |
| ! | TTAAAATAGTCTCTGATGTT+TGG | + | chr7_2:29327092-29327111 | Msa1055290:intron | 25.0% |
| ! | TAAAATAGTCTCTGATGTTT+GGG | + | chr7_2:29327093-29327112 | Msa1055290:intron | 25.0% |
| ! | AATCGATCAATCAATGAAAT+AGG | + | chr7_2:29327375-29327394 | Msa1055290:intron | 25.0% |
| !! | ACAATTGATTCTCAATTGAT+TGG | - | chr7_2:29327733-29327752 | None:intergenic | 25.0% |
| !!! | TCAATTGTTCTGTTTTAATG+GGG | + | chr7_2:29327745-29327764 | Msa1055290:CDS | 25.0% |
| ! | TTACTAATAGAAGACATGTT+CGG | - | chr7_2:29328073-29328092 | None:intergenic | 25.0% |
| ! | ACTAACATAAAACACATTTG+AGG | + | chr7_2:29328129-29328148 | Msa1055290:intron | 25.0% |
| ! | GATTTATTTGATATAGGTTC+AGG | + | chr7_2:29328377-29328396 | Msa1055290:intron | 25.0% |
| ! | ATGAATCAATTGTAACATCT+AGG | + | chr7_2:29328511-29328530 | Msa1055290:intron | 25.0% |
| ! | AAAGAAACACAGAAATCAAA+TGG | - | chr7_2:29329453-29329472 | None:intergenic | 25.0% |
| ! | CATTTAATGTTTCATACAGT+AGG | - | chr7_2:29329548-29329567 | None:intergenic | 25.0% |
| ! | ACACATTTGAATTTATGTCA+GGG | - | chr7_2:29329585-29329604 | None:intergenic | 25.0% |
| ! | TACACATTTGAATTTATGTC+AGG | - | chr7_2:29329586-29329605 | None:intergenic | 25.0% |
| ! | AATACAAAAAGTGGCAAATA+AGG | + | chr7_2:29329627-29329646 | Msa1055290:intron | 25.0% |
| ! | TTTACTTTGAGCATATAATC+TGG | - | chr7_2:29329692-29329711 | None:intergenic | 25.0% |
| ! | ATATGCTCAAAGTAAAACAT+AGG | + | chr7_2:29329696-29329715 | Msa1055290:intron | 25.0% |
| ! | ATTATATAATTGAAGCTCAG+AGG | + | chr7_2:29330022-29330041 | Msa1055290:three_prime_UTR | 25.0% |
| ! | ACTAATTTATGAAGGAAGTT+TGG | - | chr7_2:29330382-29330401 | None:intergenic | 25.0% |
| ! | TCTCTAATTCAGAAAAAAGA+TGG | - | chr7_2:29330446-29330465 | None:intergenic | 25.0% |
| ! | GAATTAGAGAATACAGAAAA+AGG | + | chr7_2:29330456-29330475 | Msa1055290:three_prime_UTR | 25.0% |
| ATGAATAAGGTCACAATTGT+TGG | + | chr7_2:29325194-29325213 | Msa1055290:CDS | 30.0% | |
| TTTCATTCAAAATGCATGCA+TGG | - | chr7_2:29325329-29325348 | None:intergenic | 30.0% | |
| !! | GGCTTTTGAGAAAATTATGA+TGG | - | chr7_2:29325366-29325385 | None:intergenic | 30.0% |
| !! | AGGTTCTAAATAAATGTGGT+TGG | + | chr7_2:29325578-29325597 | Msa1055290:intron | 30.0% |
| ! | TTTGAGTTATAAGTACGACA+AGG | - | chr7_2:29325743-29325762 | None:intergenic | 30.0% |
| TCGTACTTATAACTCAAAGA+AGG | + | chr7_2:29325745-29325764 | Msa1055290:intron | 30.0% | |
| TGAAAAAATACACTTGTGCA+TGG | + | chr7_2:29325892-29325911 | Msa1055290:intron | 30.0% | |
| ! | TTTTTCATCTTTGTAGACCT+AGG | - | chr7_2:29326107-29326126 | None:intergenic | 30.0% |
| ! | CATTGATAGTCAATGTATGT+AGG | + | chr7_2:29326315-29326334 | Msa1055290:intron | 30.0% |
| TTTGGCCTCTTTATATAGAT+AGG | + | chr7_2:29326421-29326440 | Msa1055290:intron | 30.0% | |
| TTGGCCTCTTTATATAGATA+GGG | + | chr7_2:29326422-29326441 | Msa1055290:intron | 30.0% | |
| TCAACAATCAGAAATCACAT+TGG | - | chr7_2:29326476-29326495 | None:intergenic | 30.0% | |
| AATGTGATTTCTGATTGTTG+AGG | + | chr7_2:29326475-29326494 | Msa1055290:intron | 30.0% | |
| AACATGCATATGATTCCATT+GGG | - | chr7_2:29326554-29326573 | None:intergenic | 30.0% | |
| AAACATGCATATGATTCCAT+TGG | - | chr7_2:29326555-29326574 | None:intergenic | 30.0% | |
| TTTGAGGAAACTTTACCAAA+TGG | + | chr7_2:29326689-29326708 | Msa1055290:CDS | 30.0% | |
| TTGAGGAAACTTTACCAAAT+GGG | + | chr7_2:29326690-29326709 | Msa1055290:CDS | 30.0% | |
| TCATCAAACAAACCAATGTA+AGG | + | chr7_2:29326729-29326748 | Msa1055290:intron | 30.0% | |
| ! | TACATATACCTGCATTTTCA+AGG | - | chr7_2:29326908-29326927 | None:intergenic | 30.0% |
| TTGTAATTTCGCTACATTGA+AGG | + | chr7_2:29327172-29327191 | Msa1055290:intron | 30.0% | |
| AACCTGTGTTCTTCATTAAA+TGG | + | chr7_2:29327533-29327552 | Msa1055290:intron | 30.0% | |
| AACCATTTAATGAAGAACAC+AGG | - | chr7_2:29327538-29327557 | None:intergenic | 30.0% | |
| !!! | CAATTGTTCTGTTTTAATGG+GGG | + | chr7_2:29327746-29327765 | Msa1055290:CDS | 30.0% |
| GGCAATCTGTCAAAAAAAAA+AGG | - | chr7_2:29327864-29327883 | None:intergenic | 30.0% | |
| AAATTTAGTGAGGCAACAAT+TGG | + | chr7_2:29327890-29327909 | Msa1055290:intron | 30.0% | |
| TACTAATAGAAGACATGTTC+GGG | - | chr7_2:29328072-29328091 | None:intergenic | 30.0% | |
| TACTAGCAAAAGACTCATTT+AGG | + | chr7_2:29328160-29328179 | Msa1055290:intron | 30.0% | |
| CCAATATATAAGTACACTCA+AGG | - | chr7_2:29328328-29328347 | None:intergenic | 30.0% | |
| CCTTGAGTGTACTTATATAT+TGG | + | chr7_2:29328325-29328344 | Msa1055290:intron | 30.0% | |
| ! | TACAGCCACTATATTTTTCA+GGG | - | chr7_2:29328430-29328449 | None:intergenic | 30.0% |
| TCATAAAGACTACAAAAGAG+AGG | - | chr7_2:29328495-29328514 | None:intergenic | 30.0% | |
| ! | TTCTCATATTTTTCACACAC+AGG | + | chr7_2:29328695-29328714 | Msa1055290:intron | 30.0% |
| ATGAAGGGTGAGAAAATAAA+TGG | - | chr7_2:29328789-29328808 | None:intergenic | 30.0% | |
| TAGTCTGCAATAATGAGAAT+TGG | + | chr7_2:29328842-29328861 | Msa1055290:intron | 30.0% | |
| AACAATATTATTTGTGGCAG+TGG | + | chr7_2:29329040-29329059 | Msa1055290:intron | 30.0% | |
| ACAATATTATTTGTGGCAGT+GGG | + | chr7_2:29329041-29329060 | Msa1055290:intron | 30.0% | |
| TCTATCTTGTACACATTACT+TGG | + | chr7_2:29329126-29329145 | Msa1055290:intron | 30.0% | |
| CTATCTTGTACACATTACTT+GGG | + | chr7_2:29329127-29329146 | Msa1055290:intron | 30.0% | |
| AAAATACAACCACTAGAAAC+CGG | - | chr7_2:29329268-29329287 | None:intergenic | 30.0% | |
| ! | TAGTTAAATTGGTTCAACCA+CGG | - | chr7_2:29329335-29329354 | None:intergenic | 30.0% |
| CATGGTTGAAGTAGTTAAAT+TGG | - | chr7_2:29329346-29329365 | None:intergenic | 30.0% | |
| ! | ACATTGATTGGGATGATAAA+AGG | + | chr7_2:29329408-29329427 | Msa1055290:intron | 30.0% |
| !!! | TCTGTGTTTCTTTTTTCTGT+AGG | + | chr7_2:29329460-29329479 | Msa1055290:intron | 30.0% |
| ! | TTCTTTTGCATGAATCATTG+TGG | - | chr7_2:29329732-29329751 | None:intergenic | 30.0% |
| GCAAGAAATTTAGATGAATG+AGG | - | chr7_2:29329792-29329811 | None:intergenic | 30.0% | |
| ATCTAAATTTCTTGCGTGAA+GGG | + | chr7_2:29329797-29329816 | Msa1055290:intron | 30.0% | |
| TTGAATTCAACTATAGCTGA+TGG | - | chr7_2:29329929-29329948 | None:intergenic | 30.0% | |
| CCAATGACATTCATTCATAA+TGG | - | chr7_2:29330186-29330205 | None:intergenic | 30.0% | |
| CCATTATGAATGAATGTCAT+TGG | + | chr7_2:29330183-29330202 | Msa1055290:three_prime_UTR | 30.0% | |
| !! | AATTGTTGGTAGTGGCAATT+GGG | + | chr7_2:29325208-29325227 | Msa1055290:CDS | 35.0% |
| ATCAAGCTCAGTAATTTCCA+CGG | + | chr7_2:29325266-29325285 | Msa1055290:CDS | 35.0% | |
| !! | AAGTAGAAGAAAAAGTACCG+TGG | - | chr7_2:29325286-29325305 | None:intergenic | 35.0% |
| AAGAAGGCCAATTCTATCTA+TGG | + | chr7_2:29325761-29325780 | Msa1055290:intron | 35.0% | |
| !!! | CGTCGATTTGCATTTCTTTT+AGG | - | chr7_2:29325960-29325979 | None:intergenic | 35.0% |
| TCAATGTATGTAGGTTCAAG+TGG | + | chr7_2:29326324-29326343 | Msa1055290:intron | 35.0% | |
| ! | AATTAGTTGTTTCGAGCGTT+TGG | + | chr7_2:29326403-29326422 | Msa1055290:intron | 35.0% |
| GGTACCCTATCTATATAAAG+AGG | - | chr7_2:29326429-29326448 | None:intergenic | 35.0% | |
| TCAACTAATTACAGTGGAGT+TGG | - | chr7_2:29326450-29326469 | None:intergenic | 35.0% | |
| TGGATCTCAACTAATTACAG+TGG | - | chr7_2:29326456-29326475 | None:intergenic | 35.0% | |
| TGAGGAAACTTTACCAAATG+GGG | + | chr7_2:29326691-29326710 | Msa1055290:CDS | 35.0% | |
| ! | TGTATGACTAGTCCTTACAT+TGG | - | chr7_2:29326744-29326763 | None:intergenic | 35.0% |
| TAATAACTGTTCTTCATGGC+AGG | + | chr7_2:29326824-29326843 | Msa1055290:intron | 35.0% | |
| GAAAATGTTAAGTATCTCCC+CGG | + | chr7_2:29326846-29326865 | Msa1055290:CDS | 35.0% | |
| ! | TACACAATCAGGGACTATTT+TGG | - | chr7_2:29327063-29327082 | None:intergenic | 35.0% |
| ACTAATGGAGTACACAATCA+GGG | - | chr7_2:29327073-29327092 | None:intergenic | 35.0% | |
| AACTAATGGAGTACACAATC+AGG | - | chr7_2:29327074-29327093 | None:intergenic | 35.0% | |
| !!! | TTGGGACTATTTTAATGCCA+TGG | + | chr7_2:29327111-29327130 | Msa1055290:intron | 35.0% |
| !!! | CCATGGACTATTTTGACTAA+CGG | + | chr7_2:29327128-29327147 | Msa1055290:intron | 35.0% |
| GGCTACTCATTACACATTTA+GGG | + | chr7_2:29327203-29327222 | Msa1055290:intron | 35.0% | |
| CAACTTAACACAATCGTGAA+TGG | + | chr7_2:29327350-29327369 | Msa1055290:intron | 35.0% | |
| ! | TGTTTGACTTAATGCACTTC+TGG | - | chr7_2:29327439-29327458 | None:intergenic | 35.0% |
| !! | ACACAGGTTGATCAAAAATG+TGG | - | chr7_2:29327522-29327541 | None:intergenic | 35.0% |
| TGTAACACCACATCAATTCA+TGG | + | chr7_2:29327593-29327612 | Msa1055290:CDS | 35.0% | |
| ATTCCTTCCATGAATTGATG+TGG | - | chr7_2:29327603-29327622 | None:intergenic | 35.0% | |
| TCATGGAAGGAATATGCAAA+AGG | + | chr7_2:29327610-29327629 | Msa1055290:CDS | 35.0% | |
| GAATATGCAAAAGGCTTGAT+GGG | + | chr7_2:29327619-29327638 | Msa1055290:CDS | 35.0% | |
| AAAGGCTTGATGGGAAAATA+AGG | + | chr7_2:29327628-29327647 | Msa1055290:CDS | 35.0% | |
| AAAATAAGGACAGATGCAGA+GGG | + | chr7_2:29327642-29327661 | Msa1055290:CDS | 35.0% | |
| AGCTACCTCAATTGCTATAT+TGG | - | chr7_2:29327772-29327791 | None:intergenic | 35.0% | |
| ACAGATGTCACATTGAAGTA+AGG | - | chr7_2:29327968-29327987 | None:intergenic | 35.0% | |
| ! | CTGTGAGTAGTCAATCATTT+TGG | + | chr7_2:29327984-29328003 | Msa1055290:intron | 35.0% |
| ACTAATAGAAGACATGTTCG+GGG | - | chr7_2:29328071-29328090 | None:intergenic | 35.0% | |
| ATCAAATGTGTCTTCTGTTC+GGG | - | chr7_2:29328103-29328122 | None:intergenic | 35.0% | |
| CATCAAATGTGTCTTCTGTT+CGG | - | chr7_2:29328104-29328123 | None:intergenic | 35.0% | |
| ! | GAGTCTTTTGCTAGTAAGTT+TGG | - | chr7_2:29328156-29328175 | None:intergenic | 35.0% |
| ATATAGGTTCAGGATGTTGA+AGG | + | chr7_2:29328387-29328406 | Msa1055290:intron | 35.0% | |
| TATAGGTTCAGGATGTTGAA+GGG | + | chr7_2:29328388-29328407 | Msa1055290:intron | 35.0% | |
| TGGAACCCTGAAAAATATAG+TGG | + | chr7_2:29328422-29328441 | Msa1055290:CDS | 35.0% | |
| ! | CTACAGCCACTATATTTTTC+AGG | - | chr7_2:29328431-29328450 | None:intergenic | 35.0% |
| GTTACAATTGGTATCAAAGC+AGG | + | chr7_2:29328587-29328606 | Msa1055290:intron | 35.0% | |
| TCAAAACTCGCAGTTTGATT+TGG | - | chr7_2:29328618-29328637 | None:intergenic | 35.0% | |
| !! | TTTTGAGTCTAGAAGTGATC+CGG | + | chr7_2:29328632-29328651 | Msa1055290:intron | 35.0% |
| GAGAAAATAAATGGCATGGT+TGG | - | chr7_2:29328780-29328799 | None:intergenic | 35.0% | |
| ! | AATTGGTCTGAAAGAGATGA+TGG | + | chr7_2:29328859-29328878 | Msa1055290:CDS | 35.0% |
| !! | TTCAAAGCTGTTGTTTCCAT+CGG | + | chr7_2:29328886-29328905 | Msa1055290:CDS | 35.0% |
| ! | TATGTCATTTGTTTCAACCG+TGG | + | chr7_2:29329315-29329334 | Msa1055290:intron | 35.0% |
| TAACTACTTCAACCATGATC+CGG | + | chr7_2:29329349-29329368 | Msa1055290:intron | 35.0% | |
| ATGTATGTACCTGCAATTTC+TGG | - | chr7_2:29329521-29329540 | None:intergenic | 35.0% | |
| CATCTAAATTTCTTGCGTGA+AGG | + | chr7_2:29329796-29329815 | Msa1055290:intron | 35.0% | |
| AACTGCAAAAGAGGTTTATG+AGG | + | chr7_2:29329826-29329845 | Msa1055290:CDS | 35.0% | |
| AATTCAACTATAGCTGATGG+TGG | - | chr7_2:29329926-29329945 | None:intergenic | 35.0% | |
| TGTACATTAATGATCATCCG+TGG | + | chr7_2:29329969-29329988 | Msa1055290:three_prime_UTR | 35.0% | |
| CTGTTTCCACACACAAAAAA+CGG | + | chr7_2:29330227-29330246 | Msa1055290:three_prime_UTR | 35.0% | |
| TGTTTCCACACACAAAAAAC+GGG | + | chr7_2:29330228-29330247 | Msa1055290:three_prime_UTR | 35.0% | |
| ! | AAACAGCTGCTCAACATTTT+GGG | - | chr7_2:29330342-29330361 | None:intergenic | 35.0% |
| ! | AAAACAGCTGCTCAACATTT+TGG | - | chr7_2:29330343-29330362 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGAGTTTGTGTA+TGG | + | chr7_2:29330354-29330373 | Msa1055290:three_prime_UTR | 35.0% |
| ! | AAGGTCACAATTGTTGGTAG+TGG | + | chr7_2:29325200-29325219 | Msa1055290:CDS | 40.0% |
| !! | CAATTGTTGGTAGTGGCAAT+TGG | + | chr7_2:29325207-29325226 | Msa1055290:CDS | 40.0% |
| !! | ATTGTTGGTAGTGGCAATTG+GGG | + | chr7_2:29325209-29325228 | Msa1055290:CDS | 40.0% |
| !! | ATTACTGAGCTTGATGGTGT+TGG | - | chr7_2:29325261-29325280 | None:intergenic | 40.0% |
| GTGGAAATTACTGAGCTTGA+TGG | - | chr7_2:29325267-29325286 | None:intergenic | 40.0% | |
| ATTCCGATGGCACAATCTAT+CGG | + | chr7_2:29325407-29325426 | Msa1055290:intron | 40.0% | |
| GAGCAAACTGAAGGAATTAG+AGG | + | chr7_2:29325466-29325485 | Msa1055290:intron | 40.0% | |
| ! | TGGTTGGTTCTTAACGATGT+CGG | + | chr7_2:29325594-29325613 | Msa1055290:intron | 40.0% |
| GAGTGAATTTCACTACCCAA+TGG | + | chr7_2:29326536-29326555 | Msa1055290:intron | 40.0% | |
| AAACAGATGAAGTGAGGATG+TGG | + | chr7_2:29326663-29326682 | Msa1055290:intron | 40.0% | |
| AACAGATGAAGTGAGGATGT+GGG | + | chr7_2:29326664-29326683 | Msa1055290:intron | 40.0% | |
| !! | ATTTTGACCTAGCTTGACTC+CGG | - | chr7_2:29326868-29326887 | None:intergenic | 40.0% |
| !! | ATACCTGCATTTTCAAGGTC+TGG | - | chr7_2:29326903-29326922 | None:intergenic | 40.0% |
| CCGTTAGTCAAAATAGTCCA+TGG | - | chr7_2:29327131-29327150 | None:intergenic | 40.0% | |
| GCTACATTGAAGGACTATTG+CGG | + | chr7_2:29327182-29327201 | Msa1055290:intron | 40.0% | |
| CGGCTACTCATTACACATTT+AGG | + | chr7_2:29327202-29327221 | Msa1055290:intron | 40.0% | |
| AATGAGCTGACGAGTTTCAA+AGG | - | chr7_2:29327327-29327346 | None:intergenic | 40.0% | |
| AGTTAAGGATGCAAACATGC+TGG | + | chr7_2:29327566-29327585 | Msa1055290:intron | 40.0% | |
| ACACCACATCAATTCATGGA+AGG | + | chr7_2:29327597-29327616 | Msa1055290:CDS | 40.0% | |
| GGAATATGCAAAAGGCTTGA+TGG | + | chr7_2:29327618-29327637 | Msa1055290:CDS | 40.0% | |
| GAAAATAAGGACAGATGCAG+AGG | + | chr7_2:29327641-29327660 | Msa1055290:CDS | 40.0% | |
| AAATAAGGACAGATGCAGAG+GGG | + | chr7_2:29327643-29327662 | Msa1055290:CDS | 40.0% | |
| AGGGGATTTCCCTTGTAAAA+GGG | + | chr7_2:29327661-29327680 | Msa1055290:CDS | 40.0% | |
| GATTTCCCTTGTAAAAGGGA+TGG | + | chr7_2:29327665-29327684 | Msa1055290:CDS | 40.0% | |
| ATAGCAATTGAGGTAGCTAG+AGG | + | chr7_2:29327774-29327793 | Msa1055290:intron | 40.0% | |
| TGCCATGCAGAAATTTAGTG+AGG | + | chr7_2:29327880-29327899 | Msa1055290:intron | 40.0% | |
| TGCCTCACTAAATTTCTGCA+TGG | - | chr7_2:29327885-29327904 | None:intergenic | 40.0% | |
| TGGTTTGAGAATGTGTGAAG+TGG | + | chr7_2:29328004-29328023 | Msa1055290:intron | 40.0% | |
| CTAATAGAAGACATGTTCGG+GGG | - | chr7_2:29328070-29328089 | None:intergenic | 40.0% | |
| TCAAATGTGTCTTCTGTTCG+GGG | - | chr7_2:29328102-29328121 | None:intergenic | 40.0% | |
| ATAGGTTCAGGATGTTGAAG+GGG | + | chr7_2:29328389-29328408 | Msa1055290:intron | 40.0% | |
| AAGACTACAAAAGAGAGGAG+TGG | - | chr7_2:29328490-29328509 | None:intergenic | 40.0% | |
| CAATTGGTATCAAAGCAGGT+CGG | + | chr7_2:29328591-29328610 | Msa1055290:intron | 40.0% | |
| ! | TATGATCGACTCTCCTAAAC+CGG | - | chr7_2:29328654-29328673 | None:intergenic | 40.0% |
| TCACACACAGGTTTGATTGA+TGG | + | chr7_2:29328707-29328726 | Msa1055290:intron | 40.0% | |
| ! | TTTGATTGATGGCTTGGAGA+TGG | + | chr7_2:29328718-29328737 | Msa1055290:CDS | 40.0% |
| ! | TTGATTGATGGCTTGGAGAT+GGG | + | chr7_2:29328719-29328738 | Msa1055290:CDS | 40.0% |
| GGGTGAGAAAATAAATGGCA+TGG | - | chr7_2:29328784-29328803 | None:intergenic | 40.0% | |
| CCTTACTGCATGTTGTGATA+AGG | - | chr7_2:29328952-29328971 | None:intergenic | 40.0% | |
| CCTTATCACAACATGCAGTA+AGG | + | chr7_2:29328949-29328968 | Msa1055290:intron | 40.0% | |
| ATATTATTTGTGGCAGTGGG+TGG | + | chr7_2:29329044-29329063 | Msa1055290:intron | 40.0% | |
| TCTTGTACACATTACTTGGG+TGG | + | chr7_2:29329130-29329149 | Msa1055290:intron | 40.0% | |
| AACCACAATTGGACCATGAT+TGG | + | chr7_2:29329187-29329206 | Msa1055290:intron | 40.0% | |
| TGAACCAAATGACCTGTGAT+TGG | + | chr7_2:29329217-29329236 | Msa1055290:intron | 40.0% | |
| AATTGAACCTGTGAAACCTC+CGG | - | chr7_2:29329371-29329390 | None:intergenic | 40.0% | |
| ACAGTGTACGAAATCAGTTC+AGG | + | chr7_2:29329893-29329912 | Msa1055290:CDS | 40.0% | |
| GACAGCGAATTAAATCATCG+CGG | + | chr7_2:29330160-29330179 | Msa1055290:three_prime_UTR | 40.0% | |
| GTTTCCACACACAAAAAACG+GGG | + | chr7_2:29330229-29330248 | Msa1055290:three_prime_UTR | 40.0% | |
| !!! | TAAACCCCGTTTTTTGTGTG+TGG | - | chr7_2:29330236-29330255 | None:intergenic | 40.0% |
| ! | AACAGCTGCTCAACATTTTG+GGG | - | chr7_2:29330341-29330360 | None:intergenic | 40.0% |
| GTTGGATGCAACAAGCTTTG+CGG | - | chr7_2:29325243-29325262 | None:intergenic | 45.0% | |
| TTCCGATGGCACAATCTATC+GGG | + | chr7_2:29325408-29325427 | Msa1055290:intron | 45.0% | |
| TTAGGGGTTGAGCAAACTGA+AGG | + | chr7_2:29325457-29325476 | Msa1055290:intron | 45.0% | |
| ! | AAATTTTGTGATGCCCCGTG+CGG | + | chr7_2:29325708-29325727 | Msa1055290:intron | 45.0% |
| TAAGTACGACAAGGCCAACA+AGG | - | chr7_2:29325734-29325753 | None:intergenic | 45.0% | |
| AGTGAGGATGTGGGTATTTG+AGG | + | chr7_2:29326673-29326692 | Msa1055290:CDS | 45.0% | |
| TCTGTGAGCTTATCCCCATT+TGG | - | chr7_2:29326707-29326726 | None:intergenic | 45.0% | |
| ! | TTTTGACCTAGCTTGACTCC+GGG | - | chr7_2:29326867-29326886 | None:intergenic | 45.0% |
| GATCCAGACCTTGAAAATGC+AGG | + | chr7_2:29326897-29326916 | Msa1055290:CDS | 45.0% | |
| ! | GTGGTGTCAAGATGCATATG+CGG | - | chr7_2:29327305-29327324 | None:intergenic | 45.0% |
| GAGGGGATTTCCCTTGTAAA+AGG | + | chr7_2:29327660-29327679 | Msa1055290:CDS | 45.0% | |
| TTCCCTTGTAAAAGGGATGG+AGG | + | chr7_2:29327668-29327687 | Msa1055290:CDS | 45.0% | |
| ! | GACCTCCATCCCTTTTACAA+GGG | - | chr7_2:29327673-29327692 | None:intergenic | 45.0% |
| ! | TGACCTCCATCCCTTTTACA+AGG | - | chr7_2:29327674-29327693 | None:intergenic | 45.0% |
| AAAAGGGATGGAGGTCAAGA+AGG | + | chr7_2:29327677-29327696 | Msa1055290:CDS | 45.0% | |
| ACAAAGAAGCTGCAGAGAGA+TGG | + | chr7_2:29327924-29327943 | Msa1055290:intron | 45.0% | |
| CAAAGAAGCTGCAGAGAGAT+GGG | + | chr7_2:29327925-29327944 | Msa1055290:intron | 45.0% | |
| CAAATGTGTCTTCTGTTCGG+GGG | - | chr7_2:29328101-29328120 | None:intergenic | 45.0% | |
| GTTGAAGGGGTTGAAATGTG+TGG | + | chr7_2:29328402-29328421 | Msa1055290:CDS | 45.0% | |
| AATATAGTGGCTGTAGCTGC+AGG | + | chr7_2:29328435-29328454 | Msa1055290:CDS | 45.0% | |
| GTCTAGAAGTGATCCGGTTT+AGG | + | chr7_2:29328638-29328657 | Msa1055290:intron | 45.0% | |
| ! | CACAGGTTTGATTGATGGCT+TGG | + | chr7_2:29328712-29328731 | Msa1055290:intron | 45.0% |
| !! | AAGGTACTGTTCTTGACCGA+TGG | - | chr7_2:29328905-29328924 | None:intergenic | 45.0% |
| !!! | AGTACCTTTTTCGAGAGCTG+TGG | + | chr7_2:29328917-29328936 | Msa1055290:CDS | 45.0% |
| TACACCACAGCTCTCGAAAA+AGG | - | chr7_2:29328924-29328943 | None:intergenic | 45.0% | |
| GCTGCAGCTTATGCAAGAAA+TGG | + | chr7_2:29329083-29329102 | Msa1055290:CDS | 45.0% | |
| GCAGCTTATGCAAGAAATGG+CGG | + | chr7_2:29329086-29329105 | Msa1055290:CDS | 45.0% | |
| ! | ATGCAAGAAATGGCGGAAAG+AGG | + | chr7_2:29329093-29329112 | Msa1055290:CDS | 45.0% |
| GTCCAATCATGGTCCAATTG+TGG | - | chr7_2:29329192-29329211 | None:intergenic | 45.0% | |
| AATTGGACCATGATTGGACG+AGG | + | chr7_2:29329193-29329212 | Msa1055290:intron | 45.0% | |
| CGATCCAATCACAGGTCATT+TGG | - | chr7_2:29329224-29329243 | None:intergenic | 45.0% | |
| GGTTCAATCGATCCAATCAC+AGG | - | chr7_2:29329232-29329251 | None:intergenic | 45.0% | |
| TGGATCGATTGAACCGAAGT+TGG | + | chr7_2:29329237-29329256 | Msa1055290:intron | 45.0% | |
| !! | TGAACCGAAGTTGGTACAAC+CGG | + | chr7_2:29329246-29329265 | Msa1055290:intron | 45.0% |
| GAAACCGGTTGTACCAACTT+CGG | - | chr7_2:29329253-29329272 | None:intergenic | 45.0% | |
| ! | TTGGTACAACCGGTTTCTAG+TGG | + | chr7_2:29329256-29329275 | Msa1055290:intron | 45.0% |
| CTTGAAGCAGAGTTGCTTGA+AGG | + | chr7_2:29329495-29329514 | Msa1055290:CDS | 45.0% | |
| GGGTGTGTTAACTGCAAAAG+AGG | + | chr7_2:29329817-29329836 | Msa1055290:intron | 45.0% | |
| TCGTACACTGTTGTGAAGAG+TGG | - | chr7_2:29329884-29329903 | None:intergenic | 45.0% | |
| !! | CAACTATAGCTGATGGTGGA+AGG | - | chr7_2:29329922-29329941 | None:intergenic | 45.0% |
| GCAGTGGAAAATGTGTGACT+TGG | - | chr7_2:29330077-29330096 | None:intergenic | 45.0% | |
| ! | CATTTTCCACTGCAACATGC+AGG | + | chr7_2:29330084-29330103 | Msa1055290:three_prime_UTR | 45.0% |
| !! | AGCTGTGCTATTTCTAGCGA+AGG | - | chr7_2:29330306-29330325 | None:intergenic | 45.0% |
| !! | TTATTATTAAATAATATTCA+TGG | - | chr7_2:29326810-29326829 | None:intergenic | 5.0% |
| CTCCCGATAGATTGTGCCAT+CGG | - | chr7_2:29325413-29325432 | None:intergenic | 50.0% | |
| !! | ATTCGGTGTGCATCGAACCT+AGG | + | chr7_2:29326087-29326106 | Msa1055290:intron | 50.0% |
| GTATGTAGGTTCAAGTGGCG+AGG | + | chr7_2:29326329-29326348 | Msa1055290:intron | 50.0% | |
| TTTGACCTAGCTTGACTCCG+GGG | - | chr7_2:29326866-29326885 | None:intergenic | 50.0% | |
| GAGCTGACGAGTTTCAAAGG+TGG | - | chr7_2:29327324-29327343 | None:intergenic | 50.0% | |
| GGGGGCCAATATAGCAATTG+AGG | + | chr7_2:29327764-29327783 | Msa1055290:CDS | 50.0% | |
| TGGCAGTGGGTGGAAGAAAT+AGG | + | chr7_2:29329054-29329073 | Msa1055290:intron | 50.0% | |
| AAACCAGACCGAAACCAGTC+TGG | + | chr7_2:29329162-29329181 | Msa1055290:intron | 50.0% | |
| !! | GTGGTTCACCAGACTGGTTT+CGG | - | chr7_2:29329173-29329192 | None:intergenic | 50.0% |
| CCAATTGTGGTTCACCAGAC+TGG | - | chr7_2:29329179-29329198 | None:intergenic | 50.0% | |
| CCAGTCTGGTGAACCACAAT+TGG | + | chr7_2:29329176-29329195 | Msa1055290:intron | 50.0% | |
| GGTTCAACCTCGTCCAATCA+TGG | - | chr7_2:29329203-29329222 | None:intergenic | 50.0% | |
| CTACTTCAACCATGATCCGG+AGG | + | chr7_2:29329352-29329371 | Msa1055290:intron | 50.0% | |
| GCTTGAAGGCCAGAAATTGC+AGG | + | chr7_2:29329509-29329528 | Msa1055290:CDS | 50.0% | |
| ! | TATGAGGTTCTAACCGCTCG+CGG | + | chr7_2:29329842-29329861 | Msa1055290:CDS | 50.0% |
| CTGTTTCCTGCATGTTGCAG+TGG | - | chr7_2:29330093-29330112 | None:intergenic | 50.0% | |
| GGCTATCAAGAACCACTAGC+AGG | + | chr7_2:29330204-29330223 | Msa1055290:three_prime_UTR | 50.0% | |
| TATCTCCCCGGAGTCAAGCT+AGG | + | chr7_2:29326858-29326877 | Msa1055290:CDS | 55.0% | |
| GGGATGGAGGTCAAGAAGGA+AGG | + | chr7_2:29327681-29327700 | Msa1055290:CDS | 55.0% | |
| !! | TCACCAGACTGGTTTCGGTC+TGG | - | chr7_2:29329168-29329187 | None:intergenic | 55.0% |
| CCTGTGAAACCTCCGGATCA+TGG | - | chr7_2:29329364-29329383 | None:intergenic | 55.0% | |
| CCATGATCCGGAGGTTTCAC+AGG | + | chr7_2:29329361-29329380 | Msa1055290:intron | 55.0% | |
| !! | CACGATCTCTGAGGCTTCCA+CGG | - | chr7_2:29329989-29330008 | None:intergenic | 55.0% |
| GTGTGGAAACAGCCTGCTAG+TGG | - | chr7_2:29330219-29330238 | None:intergenic | 55.0% | |
| ACAAGGCCAACAAGGCCGCA+CGG | - | chr7_2:29325726-29325745 | None:intergenic | 60.0% | |
| ! | AGGTTCTAACCGCTCGCGGA+TGG | + | chr7_2:29329846-29329865 | Msa1055290:CDS | 60.0% |
| ! | GGTTCTAACCGCTCGCGGAT+GGG | + | chr7_2:29329847-29329866 | Msa1055290:CDS | 60.0% |
| CGTGGAAGCCTCAGAGATCG+TGG | + | chr7_2:29329987-29330006 | Msa1055290:three_prime_UTR | 60.0% | |
| CCTCAGAGATCGTGGCGACT+CGG | + | chr7_2:29329995-29330014 | Msa1055290:three_prime_UTR | 60.0% | |
| AAGGCCAACAAGGCCGCACG+GGG | - | chr7_2:29325724-29325743 | None:intergenic | 65.0% | |
| CAAGGCCAACAAGGCCGCAC+GGG | - | chr7_2:29325725-29325744 | None:intergenic | 65.0% | |
| CCTCTCTACCCATCCGCGAG+CGG | - | chr7_2:29329858-29329877 | None:intergenic | 65.0% | |
| CCGAGTCGCCACGATCTCTG+AGG | - | chr7_2:29329998-29330017 | None:intergenic | 65.0% | |
| ! | GATGCCCCGTGCGGCCTTGT+TGG | + | chr7_2:29325717-29325736 | Msa1055290:intron | 70.0% |
| CCGCTCGCGGATGGGTAGAG+AGG | + | chr7_2:29329855-29329874 | Msa1055290:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 29325194 | 29330495 | 29325194 | ID=Msa1055290;Name=Msa1055290 |
| chr7_2 | mRNA | 29325194 | 29330495 | 29325194 | ID=Msa1055290-mRNA-1;Parent=Msa1055290;Name=Msa1055290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.55|0.4|1|1|1|10|528|312 |
| chr7_2 | exon | 29325194 | 29325287 | 29325194 | ID=Msa1055290-mRNA-1:exon:6041;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29326669 | 29326745 | 29326669 | ID=Msa1055290-mRNA-1:exon:6042;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29326846 | 29326918 | 29326846 | ID=Msa1055290-mRNA-1:exon:6043;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29327568 | 29327785 | 29327568 | ID=Msa1055290-mRNA-1:exon:6044;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29328393 | 29328456 | 29328393 | ID=Msa1055290-mRNA-1:exon:6045;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29328717 | 29328754 | 29328717 | ID=Msa1055290-mRNA-1:exon:6046;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29328845 | 29328965 | 29328845 | ID=Msa1055290-mRNA-1:exon:6047;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29329060 | 29329114 | 29329060 | ID=Msa1055290-mRNA-1:exon:6048;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29329482 | 29329530 | 29329482 | ID=Msa1055290-mRNA-1:exon:6049;Parent=Msa1055290-mRNA-1 |
| chr7_2 | exon | 29329818 | 29330495 | 29329818 | ID=Msa1055290-mRNA-1:exon:6050;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29325194 | 29325287 | 29325194 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29326669 | 29326745 | 29326669 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29326846 | 29326918 | 29326846 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29327568 | 29327785 | 29327568 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29328393 | 29328456 | 29328393 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29328717 | 29328754 | 29328717 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29328845 | 29328965 | 29328845 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29329060 | 29329114 | 29329060 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29329482 | 29329530 | 29329482 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | CDS | 29329818 | 29329967 | 29329818 | ID=Msa1055290-mRNA-1:cds;Parent=Msa1055290-mRNA-1 |
| chr7_2 | three_prime_UTR | 29329968 | 29330495 | 29329968 | ID=Msa1055290-mRNA-1:three_prime_utr;Parent=Msa1055290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
