Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019990 | XP_013459357.1 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 7.79e-57 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019990 | sp|Q8LEQ4|DPM3_ARATH | 78.652 | 89 | 19 | 0 | 1 | 89 | 1 | 89 | 9.71e-50 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019990 | A0A072UWH9 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 3.72e-57 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0408250 | Msa1019990 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa1019990 | Msa1069660 | 0.802779 | 4.771040e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019990 | MtrunA17_Chr3g0091371 | 100.000 | 89 | 0 | 0 | 1 | 89 | 1 | 89 | 7.16e-61 | 179 |
| Msa1019990 | MtrunA17_Chr7g0235781 | 97.753 | 89 | 2 | 0 | 1 | 89 | 1 | 89 | 5.52e-60 | 177 |
| Msa1019990 | MtrunA17_Chr3g0091381 | 47.959 | 98 | 11 | 1 | 32 | 89 | 4 | 101 | 2.07e-18 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019990 | AT1G48140.1 | 78.652 | 89 | 19 | 0 | 1 | 89 | 1 | 89 | 9.87e-51 | 154 |
| Msa1019990 | AT1G48140.2 | 83.333 | 72 | 12 | 0 | 1 | 72 | 1 | 72 | 5.39e-41 | 129 |
Find 46 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTGCCATCACTGCTTTA+TGG | 0.201906 | 7_1:+42195830 | Msa1019990:CDS |
| AGGATGTTACGGTCTATTAA+TGG | 0.288239 | 7_1:+42196821 | Msa1019990:CDS |
| CCGCCTGTTTCTTCATCAAT+TGG | 0.302645 | 7_1:+42191879 | Msa1019990:five_prime_UTR |
| ATAAATTGTGCTCATGTATA+AGG | 0.307647 | 7_1:-42199056 | None:intergenic |
| GATAATAATGTCCAACTTGT+AGG | 0.326981 | 7_1:-42199087 | None:intergenic |
| AATTGCCATCACTGCTTTAT+GGG | 0.343013 | 7_1:+42195831 | Msa1019990:CDS |
| GGACTCAGACTGGCGGCAGC+AGG | 0.373923 | 7_1:-42191825 | None:intergenic |
| CCTTTGCTTCAAATATTCCT+TGG | 0.386512 | 7_1:-42198668 | None:intergenic |
| GCGACGGTGAGGCGCGGCGG+TGG | 0.398448 | 7_1:-42191794 | None:intergenic |
| GCCATCACTGCTTTATGGGT+TGG | 0.406869 | 7_1:+42195835 | Msa1019990:CDS |
| ACCAACCAAGTATGACTTTG+AGG | 0.427005 | 7_1:-42195880 | None:intergenic |
| ATGGCGGCGACGGTGAGGCG+CGG | 0.439644 | 7_1:-42191800 | None:intergenic |
| TGTAAAGTTTCAAATAAGTT+CGG | 0.440453 | 7_1:-42199182 | None:intergenic |
| TCATTCCTCAAAGTCATACT+TGG | 0.460967 | 7_1:+42195875 | Msa1019990:CDS |
| ACACCAATTGATGAAGAAAC+AGG | 0.465222 | 7_1:-42191882 | None:intergenic |
| AGAAGCCCTGTTGTTGCAAA+AGG | 0.467171 | 7_1:+42196881 | Msa1019990:CDS |
| GGTCTATTAATGGTTGGAGT+TGG | 0.472163 | 7_1:+42196831 | Msa1019990:CDS |
| AGACTGGCGGCAGCAGGGGA+TGG | 0.472509 | 7_1:-42191819 | None:intergenic |
| CAAGGAATATTTGAAGCAAA+GGG | 0.473157 | 7_1:+42198669 | Msa1019990:CDS |
| GAATGATAGAAGTTTGTAGA+AGG | 0.473750 | 7_1:-42195858 | None:intergenic |
| CCAGGATATTGTTGAGGCCA+AGG | 0.475547 | 7_1:+42198651 | Msa1019990:intron |
| GCAGCAGGGGATGGCGGCGA+CGG | 0.485825 | 7_1:-42191810 | None:intergenic |
| AAAGACACAACAAAATAGAT+TGG | 0.489005 | 7_1:-42196798 | None:intergenic |
| GTTGTGTCTTTAGGATGTTA+CGG | 0.499163 | 7_1:+42196810 | Msa1019990:CDS |
| GACTCAGACTGGCGGCAGCA+GGG | 0.519422 | 7_1:-42191824 | None:intergenic |
| CTGGCGGCAGCAGGGGATGG+CGG | 0.522418 | 7_1:-42191816 | None:intergenic |
| TTCTTTCCAGGATATTGTTG+AGG | 0.525026 | 7_1:+42198645 | Msa1019990:intron |
| GCGGCGACGGTGAGGCGCGG+CGG | 0.529747 | 7_1:-42191797 | None:intergenic |
| AGGGGATGGCGGCGACGGTG+AGG | 0.536401 | 7_1:-42191805 | None:intergenic |
| ACTCAGACTGGCGGCAGCAG+GGG | 0.540109 | 7_1:-42191823 | None:intergenic |
| CCAAGGAATATTTGAAGCAA+AGG | 0.542512 | 7_1:+42198668 | Msa1019990:CDS |
| TCCTCAAAGTCATACTTGGT+TGG | 0.545138 | 7_1:+42195879 | Msa1019990:CDS |
| GCCAACCCATAAAGCAGTGA+TGG | 0.562669 | 7_1:-42195836 | None:intergenic |
| TGTTACGGTCTATTAATGGT+TGG | 0.564374 | 7_1:+42196825 | Msa1019990:CDS |
| ATTTCTGAAAATGATTACAA+AGG | 0.568252 | 7_1:-42199232 | None:intergenic |
| CGGTTAGGGAGGACTCAGAC+TGG | 0.569764 | 7_1:-42191835 | None:intergenic |
| TGCAACAACAGGGCTTCTTG+AGG | 0.575185 | 7_1:-42196876 | None:intergenic |
| TATTGTAAAGATATTGTCGC+TGG | 0.577323 | 7_1:+42195807 | Msa1019990:CDS |
| GATCTACAGAACACATCAGC+TGG | 0.577779 | 7_1:-42198707 | None:intergenic |
| GGCGGTGGAGTGATTTGAGA+AGG | 0.584082 | 7_1:-42191779 | None:intergenic |
| AGGGCTTCTTGAGGACAAGT+AGG | 0.584926 | 7_1:-42196867 | None:intergenic |
| TGAGACGTGTTATTCCATAG+AGG | 0.590874 | 7_1:-42191739 | None:intergenic |
| GAGACGTGTTATTCCATAGA+GGG | 0.594209 | 7_1:-42191738 | None:intergenic |
| TTAGGGAGGACTCAGACTGG+CGG | 0.686883 | 7_1:-42191832 | None:intergenic |
| CCAATTGATGAAGAAACAGG+CGG | 0.701801 | 7_1:-42191879 | None:intergenic |
| AAGGAATATTTGAAGCAAAG+GGG | 0.722853 | 7_1:+42198670 | Msa1019990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTATTTTTAAAA+TGG | + | chr7_1:42194402-42194421 | Msa1019990:intron | 0.0% |
| !!! | ATTTGATGAATTTTTTTTTA+AGG | + | chr7_1:42192077-42192096 | Msa1019990:intron | 10.0% |
| !! | TCAAATATAAATAAAAGTAA+CGG | - | chr7_1:42193508-42193527 | None:intergenic | 10.0% |
| !! | AAAAGGAAAAAAAAAAATTA+TGG | - | chr7_1:42195202-42195221 | None:intergenic | 10.0% |
| !! | AAATATAAAAAAGAATCAAA+AGG | - | chr7_1:42196115-42196134 | None:intergenic | 10.0% |
| !!! | TTACTATATTTTCTTAATTT+TGG | + | chr7_1:42196624-42196643 | Msa1019990:intron | 10.0% |
| !!! | TACTATATTTTCTTAATTTT+GGG | + | chr7_1:42196625-42196644 | Msa1019990:intron | 10.0% |
| !! | TATCATTATACAAAAAAATT+AGG | + | chr7_1:42197776-42197795 | Msa1019990:intron | 10.0% |
| !! | ATCATTATACAAAAAAATTA+GGG | + | chr7_1:42197777-42197796 | Msa1019990:intron | 10.0% |
| !! | AGAAATTAGTAAATGTAAAT+GGG | - | chr7_1:42191919-42191938 | None:intergenic | 15.0% |
| !! | AAGAAATTAGTAAATGTAAA+TGG | - | chr7_1:42191920-42191939 | None:intergenic | 15.0% |
| !! | TTTGTTAAGATTATGAATTT+AGG | + | chr7_1:42192037-42192056 | Msa1019990:intron | 15.0% |
| !! | TATACCATTTCAAAATAAAT+AGG | - | chr7_1:42192621-42192640 | None:intergenic | 15.0% |
| !!! | TAACCAATTTTAAACTTTTA+AGG | + | chr7_1:42192704-42192723 | Msa1019990:intron | 15.0% |
| !!! | CTGTTACTTTTATTTATATT+TGG | + | chr7_1:42193437-42193456 | Msa1019990:intron | 15.0% |
| !!! | ACTTTTATTTATATTTGGTT+AGG | + | chr7_1:42193442-42193461 | Msa1019990:intron | 15.0% |
| !!! | ATGTTTGTTTTATTCATTTA+GGG | + | chr7_1:42193620-42193639 | Msa1019990:intron | 15.0% |
| !!! | AATTTTTTTATGCAAAATCA+GGG | - | chr7_1:42194940-42194959 | None:intergenic | 15.0% |
| !!! | TATAGGAGTATATAATATTA+TGG | + | chr7_1:42196353-42196372 | Msa1019990:intron | 15.0% |
| !! | TATATAATATTATGGCATAT+AGG | + | chr7_1:42196361-42196380 | Msa1019990:intron | 15.0% |
| !! | AGGAAAACATATATTATTTA+TGG | - | chr7_1:42196548-42196567 | None:intergenic | 15.0% |
| !!! | ACTATATTTTCTTAATTTTG+GGG | + | chr7_1:42196626-42196645 | Msa1019990:intron | 15.0% |
| !!! | TTGTATAATGATAAGTTTTT+TGG | - | chr7_1:42197769-42197788 | None:intergenic | 15.0% |
| !!! | ATATTACTATTTAGAGTAAA+AGG | - | chr7_1:42198809-42198828 | None:intergenic | 15.0% |
| !! | TAAATTGTGTATCATATATA+GGG | - | chr7_1:42199024-42199043 | None:intergenic | 15.0% |
| !! | ATAAATTGTGTATCATATAT+AGG | - | chr7_1:42199025-42199044 | None:intergenic | 15.0% |
| !! | AGGATTTATTCATAAATCTA+GGG | - | chr7_1:42191953-42191972 | None:intergenic | 20.0% |
| !! | AAGGATTTATTCATAAATCT+AGG | - | chr7_1:42191954-42191973 | None:intergenic | 20.0% |
| !! | AAGATTATGAATTTAGGAAT+TGG | + | chr7_1:42192043-42192062 | Msa1019990:intron | 20.0% |
| !!! | ATTGCCTATTTATTTTGAAA+TGG | + | chr7_1:42192614-42192633 | Msa1019990:intron | 20.0% |
| !!! | TTGCCTTAAAAGTTTAAAAT+TGG | - | chr7_1:42192710-42192729 | None:intergenic | 20.0% |
| !!! | GATGTTTGTTTTATTCATTT+AGG | + | chr7_1:42193619-42193638 | Msa1019990:intron | 20.0% |
| !!! | AATCTTTTACTTCAAATTTG+TGG | + | chr7_1:42194796-42194815 | Msa1019990:intron | 20.0% |
| !!! | CAATTTTTTTATGCAAAATC+AGG | - | chr7_1:42194941-42194960 | None:intergenic | 20.0% |
| !!! | CTGATTTTGCATAAAAAAAT+TGG | + | chr7_1:42194939-42194958 | Msa1019990:intron | 20.0% |
| !! | GAAAAAAAAAAATTATGGCA+AGG | - | chr7_1:42195197-42195216 | None:intergenic | 20.0% |
| !! | AATGTATCAATTTCGTTAAA+TGG | - | chr7_1:42195282-42195301 | None:intergenic | 20.0% |
| !! | ATAAAGCATATACATAATTC+AGG | - | chr7_1:42195368-42195387 | None:intergenic | 20.0% |
| !! | TTTATAGTGTTATATGATGA+TGG | + | chr7_1:42195383-42195402 | Msa1019990:intron | 20.0% |
| !! | TTATAGTGTTATATGATGAT+GGG | + | chr7_1:42195384-42195403 | Msa1019990:intron | 20.0% |
| !!! | TCTGTTTTATACTAGTTATA+AGG | + | chr7_1:42195459-42195478 | Msa1019990:intron | 20.0% |
| !!! | TAACTTTTTAATGTGTTCTA+TGG | + | chr7_1:42195932-42195951 | Msa1019990:intron | 20.0% |
| !! | TAAAAAAGAATCAAAAGGTT+CGG | - | chr7_1:42196110-42196129 | None:intergenic | 20.0% |
| !! | AATGAAACTAATGCTTTAAT+CGG | - | chr7_1:42196434-42196453 | None:intergenic | 20.0% |
| !!! | GAAAACGTATATTTTTTTCA+GGG | - | chr7_1:42196571-42196590 | None:intergenic | 20.0% |
| !!! | AATACATTACCTAGAATTTT+AGG | - | chr7_1:42196593-42196612 | None:intergenic | 20.0% |
| !!! | CAATTGTTTGAAATAATTTC+AGG | + | chr7_1:42197025-42197044 | Msa1019990:intron | 20.0% |
| !! | TTAGAAATTAGCTATTACTA+AGG | + | chr7_1:42197122-42197141 | Msa1019990:intron | 20.0% |
| !! | ACTGTAAAGAAACAAAAATT+TGG | - | chr7_1:42197334-42197353 | None:intergenic | 20.0% |
| !! | CAAACTATGATAATCAATAT+GGG | - | chr7_1:42198031-42198050 | None:intergenic | 20.0% |
| !! | TCAAACTATGATAATCAATA+TGG | - | chr7_1:42198032-42198051 | None:intergenic | 20.0% |
| !!! | ATTTTTGGATACAATAACTT+TGG | + | chr7_1:42198219-42198238 | Msa1019990:intron | 20.0% |
| !! | TTTAAACCAAGTAAAGATTT+GGG | - | chr7_1:42198469-42198488 | None:intergenic | 20.0% |
| !! | ATTTAAACCAAGTAAAGATT+TGG | - | chr7_1:42198470-42198489 | None:intergenic | 20.0% |
| !! | AAATCTTTACTTGGTTTAAA+TGG | + | chr7_1:42198469-42198488 | Msa1019990:intron | 20.0% |
| !!! | CATATCATATTTAGAGTAAA+AGG | - | chr7_1:42199001-42199020 | None:intergenic | 20.0% |
| !! | TGTAAAGTTTCAAATAAGTT+CGG | - | chr7_1:42199185-42199204 | None:intergenic | 20.0% |
| !!! | ATTTCTGAAAATGATTACAA+AGG | - | chr7_1:42199235-42199254 | None:intergenic | 20.0% |
| ! | AAAAGGCAATAAAACAGATA+AGG | - | chr7_1:42191973-42191992 | None:intergenic | 25.0% |
| !! | CCTTTTCATTTTATGCAATT+GGG | + | chr7_1:42191987-42192006 | Msa1019990:intron | 25.0% |
| !! | CTTTTCATTTTATGCAATTG+GGG | + | chr7_1:42191988-42192007 | Msa1019990:intron | 25.0% |
| !! | GTTTAAAATTGGTTAACAAC+CGG | - | chr7_1:42192699-42192718 | None:intergenic | 25.0% |
| ! | AAACACATTGAATTAGATCA+TGG | - | chr7_1:42192781-42192800 | None:intergenic | 25.0% |
| !!! | TTTTTAGAGAAATTCAAAGC+AGG | + | chr7_1:42192932-42192951 | Msa1019990:intron | 25.0% |
| ! | TAGCAATGAAATGAATTTCA+TGG | + | chr7_1:42193123-42193142 | Msa1019990:intron | 25.0% |
| ! | GCATGACAAAAAAAATTAAC+TGG | + | chr7_1:42193289-42193308 | Msa1019990:intron | 25.0% |
| !! | AACATTTTCATGGTGAAATT+AGG | + | chr7_1:42193532-42193551 | Msa1019990:intron | 25.0% |
| ! | TACTGTTCTTATTATTGAGA+TGG | + | chr7_1:42193590-42193609 | Msa1019990:intron | 25.0% |
| !!! | TGTTTTATTCATTTAGGGAT+TGG | + | chr7_1:42193625-42193644 | Msa1019990:intron | 25.0% |
| ! | CAAGTTACTGTAAATATCAA+AGG | - | chr7_1:42193689-42193708 | None:intergenic | 25.0% |
| ! | GCTAAGTTACTAAAATGATA+AGG | - | chr7_1:42193941-42193960 | None:intergenic | 25.0% |
| ! | TCATTCAAAAGGATTATAAC+TGG | - | chr7_1:42194009-42194028 | None:intergenic | 25.0% |
| ! | CAACAATGAAATGAATTTCA+TGG | + | chr7_1:42194325-42194344 | Msa1019990:intron | 25.0% |
| ! | TACATAAATCAGACATTTAC+TGG | - | chr7_1:42194487-42194506 | None:intergenic | 25.0% |
| ! | AGAAAATAAATGTCTCAAAC+AGG | - | chr7_1:42194564-42194583 | None:intergenic | 25.0% |
| !!! | AATGCATTGATTTAGTTTTC+TGG | + | chr7_1:42194661-42194680 | Msa1019990:intron | 25.0% |
| ! | AACTAACATACTCATATTGA+TGG | + | chr7_1:42194760-42194779 | Msa1019990:intron | 25.0% |
| ! | AAATTTGTGGTCGTAAATAA+AGG | + | chr7_1:42194809-42194828 | Msa1019990:intron | 25.0% |
| ! | AGTATTTATTTGCATAACTC+TGG | + | chr7_1:42194846-42194865 | Msa1019990:intron | 25.0% |
| !!! | ATGAACTTTTGAAAGTAATC+TGG | + | chr7_1:42194876-42194895 | Msa1019990:intron | 25.0% |
| !! | AATATCTGAAATGTAGTGTT+TGG | - | chr7_1:42194995-42195014 | None:intergenic | 25.0% |
| ! | GTGGCAAAATATAAAATTCA+AGG | + | chr7_1:42195045-42195064 | Msa1019990:intron | 25.0% |
| ! | ATCACAAAAATTAAGTACGT+GGG | - | chr7_1:42195688-42195707 | None:intergenic | 25.0% |
| ! | TATCACAAAAATTAAGTACG+TGG | - | chr7_1:42195689-42195708 | None:intergenic | 25.0% |
| !! | TCATGTGTATTTTCAAAAAG+AGG | - | chr7_1:42195730-42195749 | None:intergenic | 25.0% |
| !! | TCTATGGTACAATATTCTTT+TGG | + | chr7_1:42195948-42195967 | Msa1019990:intron | 25.0% |
| !! | CTATGGTACAATATTCTTTT+GGG | + | chr7_1:42195949-42195968 | Msa1019990:intron | 25.0% |
| ! | ATGCCTATGTATAATATATG+TGG | - | chr7_1:42196238-42196257 | None:intergenic | 25.0% |
| ! | TATGCTTCTTCTTACTTATT+CGG | + | chr7_1:42196310-42196329 | Msa1019990:intron | 25.0% |
| ! | AAAAAAAAGGGAGAAATGAA+TGG | - | chr7_1:42196469-42196488 | None:intergenic | 25.0% |
| !!! | GGAAAACGTATATTTTTTTC+AGG | - | chr7_1:42196572-42196591 | None:intergenic | 25.0% |
| !! | ATACGTTTTCCTAAAATTCT+AGG | + | chr7_1:42196581-42196600 | Msa1019990:intron | 25.0% |
| ! | AAAGACACAACAAAATAGAT+TGG | - | chr7_1:42196801-42196820 | None:intergenic | 25.0% |
| !!! | ATCTATTTTGTTGTGTCTTT+AGG | + | chr7_1:42196801-42196820 | Msa1019990:CDS | 25.0% |
| ! | TTTAATTCCCACACTTAATT+TGG | + | chr7_1:42197066-42197085 | Msa1019990:intron | 25.0% |
| ! | TTTGTATCCAAATTAAGTGT+GGG | - | chr7_1:42197076-42197095 | None:intergenic | 25.0% |
| ! | ATTTGTATCCAAATTAAGTG+TGG | - | chr7_1:42197077-42197096 | None:intergenic | 25.0% |
| ! | ATACAAATTAGCTATTGTTG+AGG | + | chr7_1:42197089-42197108 | Msa1019990:intron | 25.0% |
| ! | GTAATAGCTAATTTCTAAAC+TGG | - | chr7_1:42197120-42197139 | None:intergenic | 25.0% |
| !! | AAGATATCCTTGCAATTTTA+CGG | + | chr7_1:42197169-42197188 | Msa1019990:intron | 25.0% |
| !! | ATAATACGGACCTTTTTAAA+AGG | + | chr7_1:42197382-42197401 | Msa1019990:intron | 25.0% |
| !!! | TAATACGGACCTTTTTAAAA+GGG | + | chr7_1:42197383-42197402 | Msa1019990:intron | 25.0% |
| ! | GTATACTTACCAAAATGTTT+AGG | + | chr7_1:42197606-42197625 | Msa1019990:intron | 25.0% |
| !!! | TGACTTTTTCTTATTGACAA+TGG | + | chr7_1:42197644-42197663 | Msa1019990:intron | 25.0% |
| ! | TTTCTTATTGACAATGGAAT+AGG | + | chr7_1:42197650-42197669 | Msa1019990:intron | 25.0% |
| !!! | ATAAGTTTTTTGGTTCTGTA+GGG | - | chr7_1:42197759-42197778 | None:intergenic | 25.0% |
| ! | AATTAGGGACATAAATGTTA+TGG | + | chr7_1:42197792-42197811 | Msa1019990:intron | 25.0% |
| ! | TTAAACCAAGTAAAGATTTG+GGG | - | chr7_1:42198468-42198487 | None:intergenic | 25.0% |
| ! | ACAAAATGAGCAACATTATT+TGG | - | chr7_1:42198622-42198641 | None:intergenic | 25.0% |
| !!! | TTAAGAAGTACTCATGTATA+AGG | - | chr7_1:42198902-42198921 | None:intergenic | 25.0% |
| ! | ATCATGTGTAAGGAATTAAA+AGG | - | chr7_1:42198944-42198963 | None:intergenic | 25.0% |
| !!! | CAATTCCTTTTAATTCCTTT+TGG | + | chr7_1:42198967-42198986 | Msa1019990:intron | 25.0% |
| ! | ATAAATTGTGCTCATGTATA+AGG | - | chr7_1:42199059-42199078 | None:intergenic | 25.0% |
| ! | GCCTTTTCATTTTATGCAAT+TGG | + | chr7_1:42191986-42192005 | Msa1019990:intron | 30.0% |
| CCCAATTGCATAAAATGAAA+AGG | - | chr7_1:42191990-42192009 | None:intergenic | 30.0% | |
| !! | AAGTGTTAGTTGTTGACTTT+GGG | + | chr7_1:42192122-42192141 | Msa1019990:intron | 30.0% |
| TCGCATAAGTAAATCCAAAA+AGG | - | chr7_1:42192148-42192167 | None:intergenic | 30.0% | |
| !! | AGTTGTTTTCGTAACTATCT+TGG | - | chr7_1:42192274-42192293 | None:intergenic | 30.0% |
| ! | ATCTGTCAATATGGGTTTTT+AGG | + | chr7_1:42192423-42192442 | Msa1019990:intron | 30.0% |
| !!! | ATATGGGTTTTTAGGTGATA+AGG | + | chr7_1:42192431-42192450 | Msa1019990:intron | 30.0% |
| ! | CAAGTCTTATACTTGTTCTT+AGG | + | chr7_1:42192991-42193010 | Msa1019990:intron | 30.0% |
| TTGTAAAGTCCAAATGATGT+TGG | + | chr7_1:42193054-42193073 | Msa1019990:intron | 30.0% | |
| TGTAAAGTCCAAATGATGTT+GGG | + | chr7_1:42193055-42193074 | Msa1019990:intron | 30.0% | |
| ! | ATTAGACCACCATAACTTTT+AGG | + | chr7_1:42193218-42193237 | Msa1019990:intron | 30.0% |
| ! | TAGTGTACCTTTTAAGCTAA+TGG | + | chr7_1:42193387-42193406 | Msa1019990:intron | 30.0% |
| ! | ATTTGACTGCAACATTTTCA+TGG | + | chr7_1:42193522-42193541 | Msa1019990:intron | 30.0% |
| ! | ATTTTCATGGTGAAATTAGG+TGG | + | chr7_1:42193535-42193554 | Msa1019990:intron | 30.0% |
| TTAAACTTCCAAGTGATGTT+GGG | + | chr7_1:42193758-42193777 | Msa1019990:intron | 30.0% | |
| GAACTGTGAAATGAATTTCA+TGG | + | chr7_1:42193809-42193828 | Msa1019990:intron | 30.0% | |
| AAGCAAATGCATCATTCAAA+AGG | - | chr7_1:42194020-42194039 | None:intergenic | 30.0% | |
| AATTCCATGATCAAATGCAA+TGG | + | chr7_1:42194065-42194084 | Msa1019990:intron | 30.0% | |
| ATTCCATGATCAAATGCAAT+GGG | + | chr7_1:42194066-42194085 | Msa1019990:intron | 30.0% | |
| AAATAGGCTTCCAAAAAATC+AGG | - | chr7_1:42194144-42194163 | None:intergenic | 30.0% | |
| !! | TTTTGGAAGCCTATTTCTTT+TGG | + | chr7_1:42194148-42194167 | Msa1019990:intron | 30.0% |
| !! | TTTGGAAGCCTATTTCTTTT+GGG | + | chr7_1:42194149-42194168 | Msa1019990:intron | 30.0% |
| TAGTAAAGTCCAAATGATGT+TGG | + | chr7_1:42194253-42194272 | Msa1019990:intron | 30.0% | |
| AGTAAAGTCCAAATGATGTT+GGG | + | chr7_1:42194254-42194273 | Msa1019990:intron | 30.0% | |
| ! | TGCATTAGACCATAACTTTT+AGG | + | chr7_1:42194433-42194452 | Msa1019990:intron | 30.0% |
| ATGCTCATATATCTGTAATG+AGG | - | chr7_1:42194464-42194483 | None:intergenic | 30.0% | |
| TATGACAACTACGTTATAAC+TGG | + | chr7_1:42194505-42194524 | Msa1019990:intron | 30.0% | |
| !!! | TTTAGTTTTCTGGATCTAAC+TGG | + | chr7_1:42194671-42194690 | Msa1019990:intron | 30.0% |
| CACTACATTTCAGATATTGT+AGG | + | chr7_1:42194997-42195016 | Msa1019990:intron | 30.0% | |
| AAAATGCAGTGAAAAGTTAC+TGG | + | chr7_1:42195140-42195159 | Msa1019990:intron | 30.0% | |
| ! | TTCTCATTAGTGTTTTGTGA+TGG | + | chr7_1:42195309-42195328 | Msa1019990:intron | 30.0% |
| !! | TATATGATGATGGGTATGAA+TGG | + | chr7_1:42195393-42195412 | Msa1019990:intron | 30.0% |
| CGTATTCATGGTAAAATAGA+GGG | - | chr7_1:42195663-42195682 | None:intergenic | 30.0% | |
| TATTGTAAAGATATTGTCGC+TGG | + | chr7_1:42195807-42195826 | Msa1019990:CDS | 30.0% | |
| GAATGATAGAAGTTTGTAGA+AGG | - | chr7_1:42195861-42195880 | None:intergenic | 30.0% | |
| GAAAATAAAAATGGAAGTGG+GGG | - | chr7_1:42196209-42196228 | None:intergenic | 30.0% | |
| CGAAAATAAAAATGGAAGTG+GGG | - | chr7_1:42196210-42196229 | None:intergenic | 30.0% | |
| GCGAAAATAAAAATGGAAGT+GGG | - | chr7_1:42196211-42196230 | None:intergenic | 30.0% | |
| AGCGAAAATAAAAATGGAAG+TGG | - | chr7_1:42196212-42196231 | None:intergenic | 30.0% | |
| GCACCACATATATTATACAT+AGG | + | chr7_1:42196232-42196251 | Msa1019990:intron | 30.0% | |
| TATATGCCAGAAAAGAATGA+GGG | - | chr7_1:42196337-42196356 | None:intergenic | 30.0% | |
| !!! | AACGTATATTTTTTTCAGGG+AGG | - | chr7_1:42196568-42196587 | None:intergenic | 30.0% |
| ! | GTTTGAAATAATTTCAGGAC+TGG | + | chr7_1:42197030-42197049 | Msa1019990:intron | 30.0% |
| !! | TGTGATTGGCATATTTTTGA+AGG | - | chr7_1:42197228-42197247 | None:intergenic | 30.0% |
| GAGGAGAATTCTTTGATATT+CGG | - | chr7_1:42197261-42197280 | None:intergenic | 30.0% | |
| ! | AGAAACAAAAATTTGGTGAC+AGG | - | chr7_1:42197327-42197346 | None:intergenic | 30.0% |
| GCTTCCCTCTAATAATAATA+CGG | + | chr7_1:42197368-42197387 | Msa1019990:intron | 30.0% | |
| AGGTCCGTATTATTATTAGA+GGG | - | chr7_1:42197375-42197394 | None:intergenic | 30.0% | |
| AAGGTCCGTATTATTATTAG+AGG | - | chr7_1:42197376-42197395 | None:intergenic | 30.0% | |
| !! | AATACGGACCTTTTTAAAAG+GGG | + | chr7_1:42197384-42197403 | Msa1019990:intron | 30.0% |
| CAATTGAATTTGAACACAGT+GGG | - | chr7_1:42197733-42197752 | None:intergenic | 30.0% | |
| ACAATTGAATTTGAACACAG+TGG | - | chr7_1:42197734-42197753 | None:intergenic | 30.0% | |
| !!! | GATAAGTTTTTTGGTTCTGT+AGG | - | chr7_1:42197760-42197779 | None:intergenic | 30.0% |
| TCAAATCATGTTGCATAAAC+AGG | + | chr7_1:42197836-42197855 | Msa1019990:intron | 30.0% | |
| CAAATCATGTTGCATAAACA+GGG | + | chr7_1:42197837-42197856 | Msa1019990:intron | 30.0% | |
| ! | GATTATCATAGTTTGAAGCA+TGG | + | chr7_1:42198036-42198055 | Msa1019990:intron | 30.0% |
| !! | AAGAAGGATGTTGATGATAA+TGG | - | chr7_1:42198099-42198118 | None:intergenic | 30.0% |
| CTGATCAAAATGTTCAATGA+GGG | - | chr7_1:42198127-42198146 | None:intergenic | 30.0% | |
| TCTGATCAAAATGTTCAATG+AGG | - | chr7_1:42198128-42198147 | None:intergenic | 30.0% | |
| CTTATTTGATCAAACTGAGA+AGG | - | chr7_1:42198311-42198330 | None:intergenic | 30.0% | |
| ATGACAACTACAAATCAGTA+TGG | - | chr7_1:42198338-42198357 | None:intergenic | 30.0% | |
| TTACAGTCTACAAATCAGTA+TGG | - | chr7_1:42198429-42198448 | None:intergenic | 30.0% | |
| !! | TAACTGCTTAAAGAGCATTT+AGG | - | chr7_1:42198529-42198548 | None:intergenic | 30.0% |
| !!! | TCATTTTGTTGTTTCTTTCC+AGG | + | chr7_1:42198633-42198652 | Msa1019990:intron | 30.0% |
| ! | CAAGGAATATTTGAAGCAAA+GGG | + | chr7_1:42198669-42198688 | Msa1019990:CDS | 30.0% |
| ! | AAGGAATATTTGAAGCAAAG+GGG | + | chr7_1:42198670-42198689 | Msa1019990:CDS | 30.0% |
| TCAATCCGGTAATTAATTAC+CGG | - | chr7_1:42198757-42198776 | None:intergenic | 30.0% | |
| !!! | AGAGTTGCGAATGATTTTTT+TGG | + | chr7_1:42198776-42198795 | Msa1019990:intron | 30.0% |
| ! | AAAGAGTATGCATACATTAG+TGG | - | chr7_1:42198850-42198869 | None:intergenic | 30.0% |
| GAATGCCAAAAGGAATTAAA+AGG | - | chr7_1:42198975-42198994 | None:intergenic | 30.0% | |
| TAAAAGGTTAGAATGCCAAA+AGG | - | chr7_1:42198985-42199004 | None:intergenic | 30.0% | |
| GATAATAATGTCCAACTTGT+AGG | - | chr7_1:42199090-42199109 | None:intergenic | 30.0% | |
| ACACCAATTGATGAAGAAAC+AGG | - | chr7_1:42191885-42191904 | None:intergenic | 35.0% | |
| !! | GAAGTGTTAGTTGTTGACTT+TGG | + | chr7_1:42192121-42192140 | Msa1019990:intron | 35.0% |
| TATTGACAGATAGCACTGTT+TGG | - | chr7_1:42192414-42192433 | None:intergenic | 35.0% | |
| AACAGTGCTATCTGTCAATA+TGG | + | chr7_1:42192414-42192433 | Msa1019990:intron | 35.0% | |
| ACAGTGCTATCTGTCAATAT+GGG | + | chr7_1:42192415-42192434 | Msa1019990:intron | 35.0% | |
| CAAATGCAGCTAACATGATA+AGG | - | chr7_1:42192645-42192664 | None:intergenic | 35.0% | |
| TTGTAGAACAATTGTACTGC+TGG | - | chr7_1:42192896-42192915 | None:intergenic | 35.0% | |
| GAAGCAAAGCCTAAAAGTTA+TGG | - | chr7_1:42193230-42193249 | None:intergenic | 35.0% | |
| ! | AGAAGAGCCATTAGCTTAAA+AGG | - | chr7_1:42193397-42193416 | None:intergenic | 35.0% |
| TAAGCTAATGGCTCTTCTTA+CGG | + | chr7_1:42193399-42193418 | Msa1019990:intron | 35.0% | |
| ! | TTTTCATACACATCTGCCTA+TGG | + | chr7_1:42193466-42193485 | Msa1019990:intron | 35.0% |
| !! | GGTCATAAAGTACTGTTCTT+AGG | + | chr7_1:42193556-42193575 | Msa1019990:intron | 35.0% |
| !! | CATAAAGTACTGTTCTTAGG+TGG | + | chr7_1:42193559-42193578 | Msa1019990:intron | 35.0% |
| TGGTGTGATTCTGAATTTGA+TGG | + | chr7_1:42193645-42193664 | Msa1019990:intron | 35.0% | |
| !! | AACAAGGGCTTTTAGCTAAT+AGG | + | chr7_1:42193726-42193745 | Msa1019990:intron | 35.0% |
| !! | ACAAGGGCTTTTAGCTAATA+GGG | + | chr7_1:42193727-42193746 | Msa1019990:intron | 35.0% |
| CAACATCACTTGGAAGTTTA+AGG | - | chr7_1:42193759-42193778 | None:intergenic | 35.0% | |
| CTTAAACTTCCAAGTGATGT+TGG | + | chr7_1:42193757-42193776 | Msa1019990:intron | 35.0% | |
| AACTATTTGCAACTTCCATC+AGG | - | chr7_1:42193843-42193862 | None:intergenic | 35.0% | |
| AAACCCATTGCATTTGATCA+TGG | - | chr7_1:42194072-42194091 | None:intergenic | 35.0% | |
| TTCTACTGAAGTGATAGACA+TGG | + | chr7_1:42194580-42194599 | Msa1019990:intron | 35.0% | |
| TTAACAGCTACTAGCTCAAA+TGG | - | chr7_1:42194610-42194629 | None:intergenic | 35.0% | |
| ! | ATTTGCATAACTCTGGTTTG+TGG | + | chr7_1:42194853-42194872 | Msa1019990:intron | 35.0% |
| AAATGTAGTGTTTGGATTCC+TGG | - | chr7_1:42194987-42195006 | None:intergenic | 35.0% | |
| !!! | TACAGCATGTTTTGTTTGTG+TGG | + | chr7_1:42195026-42195045 | Msa1019990:intron | 35.0% |
| GCGTATTCATGGTAAAATAG+AGG | - | chr7_1:42195664-42195683 | None:intergenic | 35.0% | |
| TAATTGCCATCACTGCTTTA+TGG | + | chr7_1:42195830-42195849 | Msa1019990:CDS | 35.0% | |
| AATTGCCATCACTGCTTTAT+GGG | + | chr7_1:42195831-42195850 | Msa1019990:CDS | 35.0% | |
| TCATTCCTCAAAGTCATACT+TGG | + | chr7_1:42195875-42195894 | Msa1019990:CDS | 35.0% | |
| ! | GTACAATATTCTTTTGGGCT+GGG | + | chr7_1:42195954-42195973 | Msa1019990:intron | 35.0% |
| CGTATTTCATGTCATAGCTT+TGG | - | chr7_1:42195995-42196014 | None:intergenic | 35.0% | |
| CAGATTATAAGTCCACATTG+AGG | - | chr7_1:42196018-42196037 | None:intergenic | 35.0% | |
| ATCATAATGCTAACAACCAG+TGG | + | chr7_1:42196151-42196170 | Msa1019990:intron | 35.0% | |
| TGGTGCAGCGAAAATAAAAA+TGG | - | chr7_1:42196218-42196237 | None:intergenic | 35.0% | |
| CTATATGCCAGAAAAGAATG+AGG | - | chr7_1:42196338-42196357 | None:intergenic | 35.0% | |
| !! | CTCATTCTTTTCTGGCATAT+AGG | + | chr7_1:42196336-42196355 | Msa1019990:intron | 35.0% |
| ! | ATAGATTGGTAGCTGCATAA+AGG | - | chr7_1:42196787-42196806 | None:intergenic | 35.0% |
| !! | GTTGTGTCTTTAGGATGTTA+CGG | + | chr7_1:42196810-42196829 | Msa1019990:CDS | 35.0% |
| AGGATGTTACGGTCTATTAA+TGG | + | chr7_1:42196821-42196840 | Msa1019990:CDS | 35.0% | |
| TGTTACGGTCTATTAATGGT+TGG | + | chr7_1:42196825-42196844 | Msa1019990:CDS | 35.0% | |
| ! | CTGTGCTTTTATAGTTCGTA+TGG | + | chr7_1:42196957-42196976 | Msa1019990:intron | 35.0% |
| ! | ATATCCTTGCAATTTTACGG+AGG | + | chr7_1:42197172-42197191 | Msa1019990:intron | 35.0% |
| TCGGTTGAGAAATTTGTGAT+TGG | - | chr7_1:42197242-42197261 | None:intergenic | 35.0% | |
| GACAAAAGTTAGAATGTCTG+AGG | - | chr7_1:42197280-42197299 | None:intergenic | 35.0% | |
| ! | AACAAAAATTTGGTGACAGG+TGG | - | chr7_1:42197324-42197343 | None:intergenic | 35.0% |
| CAATAGCCATAAATCCTCAA+GGG | - | chr7_1:42197422-42197441 | None:intergenic | 35.0% | |
| TCAATAGCCATAAATCCTCA+AGG | - | chr7_1:42197423-42197442 | None:intergenic | 35.0% | |
| TGAGGATTTATGGCTATTGA+AGG | + | chr7_1:42197423-42197442 | Msa1019990:intron | 35.0% | |
| ATCTGTTGTACTAGGTTCTT+TGG | + | chr7_1:42197499-42197518 | Msa1019990:intron | 35.0% | |
| TCTGTTGTACTAGGTTCTTT+GGG | + | chr7_1:42197500-42197519 | Msa1019990:intron | 35.0% | |
| !! | CATTTTGGTAAGTATACCCT+TGG | - | chr7_1:42197603-42197622 | None:intergenic | 35.0% |
| TACCAAAATGTTTAGGCTGT+AGG | + | chr7_1:42197613-42197632 | Msa1019990:intron | 35.0% | |
| TGACAATGGAATAGGTATAG+AGG | + | chr7_1:42197658-42197677 | Msa1019990:intron | 35.0% | |
| GACAATGGAATAGGTATAGA+GGG | + | chr7_1:42197659-42197678 | Msa1019990:intron | 35.0% | |
| ACAATGGAATAGGTATAGAG+GGG | + | chr7_1:42197660-42197679 | Msa1019990:intron | 35.0% | |
| TAGGGACATAAATGTTATGG+TGG | + | chr7_1:42197795-42197814 | Msa1019990:intron | 35.0% | |
| AATCAATATGGGATACCCAA+TGG | - | chr7_1:42198020-42198039 | None:intergenic | 35.0% | |
| !! | AAGGATGTTGATGATAATGG+TGG | - | chr7_1:42198096-42198115 | None:intergenic | 35.0% |
| GAGTACTCATTAATCTAGTC+TGG | - | chr7_1:42198168-42198187 | None:intergenic | 35.0% | |
| AAAATCCTTACACATTGCAC+TGG | - | chr7_1:42198204-42198223 | None:intergenic | 35.0% | |
| ! | GTGCAATGTGTAAGGATTTT+TGG | + | chr7_1:42198204-42198223 | Msa1019990:intron | 35.0% |
| ! | TTTTGCATGACAAGGCAAAA+AGG | - | chr7_1:42198253-42198272 | None:intergenic | 35.0% |
| TTTGATCAAACTGAGAAGGA+TGG | - | chr7_1:42198307-42198326 | None:intergenic | 35.0% | |
| CTTATTCGATCAAACTGAGA+AGG | - | chr7_1:42198402-42198421 | None:intergenic | 35.0% | |
| !! | TAAAGAGCATTTAGGAGGAT+AGG | - | chr7_1:42198521-42198540 | None:intergenic | 35.0% |
| CAGATGATTGTAACCTAATG+CGG | + | chr7_1:42198564-42198583 | Msa1019990:intron | 35.0% | |
| AGATGATTGTAACCTAATGC+GGG | + | chr7_1:42198565-42198584 | Msa1019990:intron | 35.0% | |
| AACTAATATGATCCCGCATT+AGG | - | chr7_1:42198580-42198599 | None:intergenic | 35.0% | |
| TTCTTTCCAGGATATTGTTG+AGG | + | chr7_1:42198645-42198664 | Msa1019990:intron | 35.0% | |
| CCTTTGCTTCAAATATTCCT+TGG | - | chr7_1:42198671-42198690 | None:intergenic | 35.0% | |
| ! | CCAAGGAATATTTGAAGCAA+AGG | + | chr7_1:42198668-42198687 | Msa1019990:CDS | 35.0% |
| GAAGCTAATCCTAAACTTCA+GGG | - | chr7_1:42198735-42198754 | None:intergenic | 35.0% | |
| !! | TGAAGTTTAGGATTAGCTTC+CGG | + | chr7_1:42198735-42198754 | Msa1019990:intron | 35.0% |
| AGCTTCCGGTAATTAATTAC+CGG | + | chr7_1:42198749-42198768 | Msa1019990:intron | 35.0% | |
| GGAATTGTGTATCATGTGTA+AGG | - | chr7_1:42198954-42198973 | None:intergenic | 35.0% | |
| ! | TATCTCGTTTTCCTACAAGT+TGG | + | chr7_1:42199076-42199095 | Msa1019990:three_prime_UTR | 35.0% |
| CCAATTGATGAAGAAACAGG+CGG | - | chr7_1:42191882-42191901 | None:intergenic | 40.0% | |
| !!! | TTGTTGACTTTGGGCCTTTT+TGG | + | chr7_1:42192131-42192150 | Msa1019990:intron | 40.0% |
| TGAAACTTCCAAGTGATGCT+GGG | + | chr7_1:42192461-42192480 | Msa1019990:intron | 40.0% | |
| ! | AACTATTTGCCACTTCCATC+AGG | - | chr7_1:42192546-42192565 | None:intergenic | 40.0% |
| TCATGTTAGCTGCATTTGCA+TGG | + | chr7_1:42192647-42192666 | Msa1019990:intron | 40.0% | |
| CATGTTAGCTGCATTTGCAT+GGG | + | chr7_1:42192648-42192667 | Msa1019990:intron | 40.0% | |
| ! | TCAGGAAGCCCATTTCTTTT+AGG | + | chr7_1:42192869-42192888 | Msa1019990:intron | 40.0% |
| CTGCTGGACCTAAAAGAAAT+GGG | - | chr7_1:42192880-42192899 | None:intergenic | 40.0% | |
| ACTGCTGGACCTAAAAGAAA+TGG | - | chr7_1:42192881-42192900 | None:intergenic | 40.0% | |
| TTCATGGAAATCACATCCGA+TGG | + | chr7_1:42193139-42193158 | Msa1019990:intron | 40.0% | |
| ! | TGGCAACAAGAGTCTTTTAC+TGG | + | chr7_1:42193165-42193184 | Msa1019990:intron | 40.0% |
| GCAAAGCCTAAAAGTTATGG+TGG | - | chr7_1:42193227-42193246 | None:intergenic | 40.0% | |
| AAATCCATGAGCACGAACAA+TGG | + | chr7_1:42193319-42193338 | Msa1019990:intron | 40.0% | |
| AATCCATGAGCACGAACAAT+GGG | + | chr7_1:42193320-42193339 | Msa1019990:intron | 40.0% | |
| ! | TAACTTGTGTTCATAGCTGC+TGG | + | chr7_1:42193702-42193721 | Msa1019990:intron | 40.0% |
| ATTTGCAACTTCCATCAGGA+GGG | - | chr7_1:42193839-42193858 | None:intergenic | 40.0% | |
| TATTTGCAACTTCCATCAGG+AGG | - | chr7_1:42193840-42193859 | None:intergenic | 40.0% | |
| TTATAGCAGCTCCAATCACT+GGG | - | chr7_1:42193976-42193995 | None:intergenic | 40.0% | |
| ATTATAGCAGCTCCAATCAC+TGG | - | chr7_1:42193977-42193996 | None:intergenic | 40.0% | |
| GCTTCCAAAAAATCAGGAGT+GGG | - | chr7_1:42194138-42194157 | None:intergenic | 40.0% | |
| CTGCTTGACCCAAAAGAAAT+AGG | - | chr7_1:42194160-42194179 | None:intergenic | 40.0% | |
| TTCATGGAAATCCCATCTGA+TGG | + | chr7_1:42194341-42194360 | Msa1019990:intron | 40.0% | |
| GAGGCAAAGCCTAAAAGTTA+TGG | - | chr7_1:42194445-42194464 | None:intergenic | 40.0% | |
| GAAATCTCTGATCATGCACA+AGG | + | chr7_1:42194534-42194553 | Msa1019990:intron | 40.0% | |
| ! | CATACTCATATTGATGGCAG+TGG | + | chr7_1:42194766-42194785 | Msa1019990:intron | 40.0% |
| GCAAAATCAGGGTGTATATG+TGG | - | chr7_1:42194929-42194948 | None:intergenic | 40.0% | |
| TAAATCATGAAGCTTGCACG+TGG | - | chr7_1:42195095-42195114 | None:intergenic | 40.0% | |
| TGTCCATGTTGTGTCTATGT+TGG | + | chr7_1:42195249-42195268 | Msa1019990:intron | 40.0% | |
| CAACCAACATAGACACAACA+TGG | - | chr7_1:42195255-42195274 | None:intergenic | 40.0% | |
| CTTAATGACTCCACCATCAT+GGG | + | chr7_1:42195482-42195501 | Msa1019990:intron | 40.0% | |
| TAATGCCATGAATCCCATGA+TGG | - | chr7_1:42195498-42195517 | None:intergenic | 40.0% | |
| TCCTCAAAGTCATACTTGGT+TGG | + | chr7_1:42195879-42195898 | Msa1019990:CDS | 40.0% | |
| ACCAACCAAGTATGACTTTG+AGG | - | chr7_1:42195883-42195902 | None:intergenic | 40.0% | |
| CAAAGTCATACTTGGTTGGT+AGG | + | chr7_1:42195883-42195902 | Msa1019990:intron | 40.0% | |
| ! | GGTACAATATTCTTTTGGGC+TGG | + | chr7_1:42195953-42195972 | Msa1019990:intron | 40.0% |
| ACATGAAATACGCCTCAATG+TGG | + | chr7_1:42196003-42196022 | Msa1019990:intron | 40.0% | |
| TAGACTACCAACGAAATTGC+TGG | + | chr7_1:42196046-42196065 | Msa1019990:intron | 40.0% | |
| ! | AAGGTTCGGTTAAGCTGTAA+AGG | - | chr7_1:42196096-42196115 | None:intergenic | 40.0% |
| ATAATGCTAACAACCAGTGG+CGG | + | chr7_1:42196154-42196173 | Msa1019990:intron | 40.0% | |
| ! | AGAAGTATGGTTGTTAGCAG+TGG | - | chr7_1:42196762-42196781 | None:intergenic | 40.0% |
| CTGCATAAAGGACAGAAGTA+TGG | - | chr7_1:42196775-42196794 | None:intergenic | 40.0% | |
| GGTCTATTAATGGTTGGAGT+TGG | + | chr7_1:42196831-42196850 | Msa1019990:CDS | 40.0% | |
| ! | CCATACCTTTTGCAACAACA+GGG | - | chr7_1:42196889-42196908 | None:intergenic | 40.0% |
| TGTTCGTAGATAAGTGCACT+CGG | + | chr7_1:42196988-42197007 | Msa1019990:intron | 40.0% | |
| TTCTCCTCCGTAAAATTGCA+AGG | - | chr7_1:42197179-42197198 | None:intergenic | 40.0% | |
| ! | TGCAATTTTACGGAGGAGAA+AGG | + | chr7_1:42197179-42197198 | Msa1019990:intron | 40.0% |
| ! | GCAATTTTACGGAGGAGAAA+GGG | + | chr7_1:42197180-42197199 | Msa1019990:intron | 40.0% |
| !! | CCTTAGGTCCCCTTTTAAAA+AGG | - | chr7_1:42197395-42197414 | None:intergenic | 40.0% |
| !! | CCTTTTTAAAAGGGGACCTA+AGG | + | chr7_1:42197392-42197411 | Msa1019990:intron | 40.0% |
| !! | TTTTAAAAGGGGACCTAAGG+TGG | + | chr7_1:42197395-42197414 | Msa1019990:intron | 40.0% |
| GTACAACAGATTCAGCAAGT+AGG | - | chr7_1:42197490-42197509 | None:intergenic | 40.0% | |
| CTTGCTGAATCTGTTGTACT+AGG | + | chr7_1:42197491-42197510 | Msa1019990:intron | 40.0% | |
| TTTGGGCATCAAATCCAGTT+CGG | + | chr7_1:42197517-42197536 | Msa1019990:intron | 40.0% | |
| TTCGGTAGGATTTACCGTTT+CGG | + | chr7_1:42197535-42197554 | Msa1019990:intron | 40.0% | |
| ! | ATCTTTGGATTGGACCGAAA+CGG | - | chr7_1:42197552-42197571 | None:intergenic | 40.0% |
| TTTCGGTCCAATCCAAAGAT+GGG | + | chr7_1:42197552-42197571 | Msa1019990:intron | 40.0% | |
| ! | AGCCTACAGCCTAAACATTT+TGG | - | chr7_1:42197618-42197637 | None:intergenic | 40.0% |
| CAATGGAATAGGTATAGAGG+GGG | + | chr7_1:42197661-42197680 | Msa1019990:intron | 40.0% | |
| AATGGAATAGGTATAGAGGG+GGG | + | chr7_1:42197662-42197681 | Msa1019990:intron | 40.0% | |
| TAATGAACCTAGTTCAGTGG+TGG | - | chr7_1:42197894-42197913 | None:intergenic | 40.0% | |
| CCTTAATGAACCTAGTTCAG+TGG | - | chr7_1:42197897-42197916 | None:intergenic | 40.0% | |
| CCACTGAACTAGGTTCATTA+AGG | + | chr7_1:42197894-42197913 | Msa1019990:intron | 40.0% | |
| AAGAAATCAGACTCCACTTG+TGG | + | chr7_1:42197986-42198005 | Msa1019990:intron | 40.0% | |
| TTCAATGAGGGAAGTGAAGA+AGG | - | chr7_1:42198115-42198134 | None:intergenic | 40.0% | |
| TTCGATCAAACTGAGAAGGA+TGG | - | chr7_1:42198398-42198417 | None:intergenic | 40.0% | |
| TCAAGCCCCAAATCTTTACT+TGG | + | chr7_1:42198460-42198479 | Msa1019990:intron | 40.0% | |
| !! | CTGCTTAAAGAGCATTTAGG+AGG | - | chr7_1:42198526-42198545 | None:intergenic | 40.0% |
| CGCATTAGGTTACAATCATC+TGG | - | chr7_1:42198566-42198585 | None:intergenic | 40.0% | |
| GTAGATCTTCCCTGAAGTTT+AGG | + | chr7_1:42198723-42198742 | Msa1019990:intron | 40.0% | |
| GGAAGCTAATCCTAAACTTC+AGG | - | chr7_1:42198736-42198755 | None:intergenic | 40.0% | |
| ATCATTCGCAACTCTCAATC+CGG | - | chr7_1:42198771-42198790 | None:intergenic | 40.0% | |
| TTAGACTTCGTCAGCGGTTA+GGG | - | chr7_1:42191852-42191871 | None:intergenic | 45.0% | |
| AACAGCTTAGACTTCGTCAG+CGG | - | chr7_1:42191858-42191877 | None:intergenic | 45.0% | |
| ! | CCGCCTGTTTCTTCATCAAT+TGG | + | chr7_1:42191879-42191898 | Msa1019990:five_prime_UTR | 45.0% |
| CAGCATCACTTGGAAGTTTC+AGG | - | chr7_1:42192462-42192481 | None:intergenic | 45.0% | |
| CTGAAACTTCCAAGTGATGC+TGG | + | chr7_1:42192460-42192479 | Msa1019990:intron | 45.0% | |
| TTCATGTTGATCCCACCTGA+TGG | + | chr7_1:42192528-42192547 | Msa1019990:intron | 45.0% | |
| ! | ATTTGCCACTTCCATCAGGT+GGG | - | chr7_1:42192542-42192561 | None:intergenic | 45.0% |
| ! | TATTTGCCACTTCCATCAGG+TGG | - | chr7_1:42192543-42192562 | None:intergenic | 45.0% |
| GGTTAACAACCGGTACATCA+TGG | - | chr7_1:42192689-42192708 | None:intergenic | 45.0% | |
| CTGAAATTCAGCAGGAGGAT+AGG | - | chr7_1:42192853-42192872 | None:intergenic | 45.0% | |
| CTATCCTCCTGCTGAATTTC+AGG | + | chr7_1:42192851-42192870 | Msa1019990:intron | 45.0% | |
| AAACCCATTGTTCGTGCTCA+TGG | - | chr7_1:42193326-42193345 | None:intergenic | 45.0% | |
| TTCATAGCTGCTGGCAACAA+GGG | + | chr7_1:42193711-42193730 | Msa1019990:intron | 45.0% | |
| TATAGCAGCTCCAATCACTG+GGG | - | chr7_1:42193975-42193994 | None:intergenic | 45.0% | |
| AAAATCAGGAGTGGGAAGGT+AGG | - | chr7_1:42194130-42194149 | None:intergenic | 45.0% | |
| CCAAAAAATCAGGAGTGGGA+AGG | - | chr7_1:42194134-42194153 | None:intergenic | 45.0% | |
| !!! | CCTTCCCACTCCTGATTTTT+TGG | + | chr7_1:42194131-42194150 | Msa1019990:intron | 45.0% |
| GGCTTCCAAAAAATCAGGAG+TGG | - | chr7_1:42194139-42194158 | None:intergenic | 45.0% | |
| CGCAGTTTCCCAACATCATT+TGG | - | chr7_1:42194265-42194284 | None:intergenic | 45.0% | |
| TCAGGTTCCATATCCATGTC+AGG | - | chr7_1:42195350-42195369 | None:intergenic | 45.0% | |
| GCTTAATGACTCCACCATCA+TGG | + | chr7_1:42195481-42195500 | Msa1019990:intron | 45.0% | |
| ! | TTCGGTCCCTCATTCTTTTC+TGG | + | chr7_1:42196328-42196347 | Msa1019990:intron | 45.0% |
| AGTATGGTTGTTAGCAGTGG+CGG | - | chr7_1:42196759-42196778 | None:intergenic | 45.0% | |
| AGAAGCCCTGTTGTTGCAAA+AGG | + | chr7_1:42196881-42196900 | Msa1019990:CDS | 45.0% | |
| CCCTGTTGTTGCAAAAGGTA+TGG | + | chr7_1:42196886-42196905 | Msa1019990:intron | 45.0% | |
| ! | GCCATACCTTTTGCAACAAC+AGG | - | chr7_1:42196890-42196909 | None:intergenic | 45.0% |
| AACCACTAATGCACAGAGGT+AGG | - | chr7_1:42196912-42196931 | None:intergenic | 45.0% | |
| ATGCAACCACTAATGCACAG+AGG | - | chr7_1:42196916-42196935 | None:intergenic | 45.0% | |
| CAACAGATTCAGCAAGTAGG+TGG | - | chr7_1:42197487-42197506 | None:intergenic | 45.0% | |
| AACGGTAAATCCTACCGAAC+TGG | - | chr7_1:42197534-42197553 | None:intergenic | 45.0% | |
| GTTTCGGTCCAATCCAAAGA+TGG | + | chr7_1:42197551-42197570 | Msa1019990:intron | 45.0% | |
| TTCGGTCCAATCCAAAGATG+GGG | + | chr7_1:42197553-42197572 | Msa1019990:intron | 45.0% | |
| CTCCATCTCATGGTTTCCAA+GGG | + | chr7_1:42197584-42197603 | Msa1019990:intron | 45.0% | |
| TACCCTTGGAAACCATGAGA+TGG | - | chr7_1:42197589-42197608 | None:intergenic | 45.0% | |
| AGGGGGGACAAAAATGTTGT+GGG | + | chr7_1:42197678-42197697 | Msa1019990:intron | 45.0% | |
| AATGGAGTGAATGCCACAAG+TGG | - | chr7_1:42198002-42198021 | None:intergenic | 45.0% | |
| ACTTGTGGCATTCACTCCAT+TGG | + | chr7_1:42198001-42198020 | Msa1019990:intron | 45.0% | |
| CTTGTGGCATTCACTCCATT+GGG | + | chr7_1:42198002-42198021 | Msa1019990:intron | 45.0% | |
| ! | ACATTGCACTGGCAAGACTA+AGG | - | chr7_1:42198193-42198212 | None:intergenic | 45.0% |
| TCTTGCCAGTGCAATGTGTA+AGG | + | chr7_1:42198196-42198215 | Msa1019990:intron | 45.0% | |
| ! | GCAGACACTTTTGCATGACA+AGG | - | chr7_1:42198261-42198280 | None:intergenic | 45.0% |
| TGAGAAGGATGGTCCATTAC+AGG | - | chr7_1:42198296-42198315 | None:intergenic | 45.0% | |
| !! | ATGCAAAAGTGTCTGCCATC+TGG | + | chr7_1:42198356-42198375 | Msa1019990:intron | 45.0% |
| TGAGAAGGATGGTCCATTAC+AGG | - | chr7_1:42198296-42198315 | None:intergenic | 45.0% | |
| GATCTACAGAACACATCAGC+TGG | - | chr7_1:42198710-42198729 | None:intergenic | 45.0% | |
| !!! | ACAATTTATTTTAATTAAAA+AGG | - | chr7_1:42195219-42195238 | None:intergenic | 5.0% |
| !! | AAAATAAAACAAAAAAAAAA+GGG | - | chr7_1:42196481-42196500 | None:intergenic | 5.0% |
| !! | TAAAATAAAACAAAAAAAAA+AGG | - | chr7_1:42196482-42196501 | None:intergenic | 5.0% |
| !!! | TAAATGTTATAATTATTTTT+AGG | - | chr7_1:42196670-42196689 | None:intergenic | 5.0% |
| !! | GTTAAAATAATTTATAATAA+AGG | + | chr7_1:42197144-42197163 | Msa1019990:intron | 5.0% |
| CTTAGACTTCGTCAGCGGTT+AGG | - | chr7_1:42191853-42191872 | None:intergenic | 50.0% | |
| TTGATCCCACCTGATGGAAG+TGG | + | chr7_1:42192534-42192553 | Msa1019990:intron | 50.0% | |
| GCATTTGCATGGGCAGAGAT+TGG | + | chr7_1:42192658-42192677 | Msa1019990:intron | 50.0% | |
| TTGGAGCAGCCATGATGTAC+CGG | + | chr7_1:42192677-42192696 | Msa1019990:intron | 50.0% | |
| GCTTCCTGAAATTCAGCAGG+AGG | - | chr7_1:42192858-42192877 | None:intergenic | 50.0% | |
| TGGGCTTCCTGAAATTCAGC+AGG | - | chr7_1:42192861-42192880 | None:intergenic | 50.0% | |
| CGCAGTCTCCCAACATCATT+TGG | - | chr7_1:42193066-42193085 | None:intergenic | 50.0% | |
| GAAATCACATCCGATGGCAG+TGG | + | chr7_1:42193145-42193164 | Msa1019990:intron | 50.0% | |
| ACTCTTGTTGCCACTGCCAT+CGG | - | chr7_1:42193158-42193177 | None:intergenic | 50.0% | |
| AATGGCTCTTCTTACGGTGC+TGG | + | chr7_1:42193405-42193424 | Msa1019990:intron | 50.0% | |
| ACACATCTGCCTATGGATGC+TGG | + | chr7_1:42193473-42193492 | Msa1019990:intron | 50.0% | |
| ATCTGCCTATGGATGCTGGA+AGG | + | chr7_1:42193477-42193496 | Msa1019990:intron | 50.0% | |
| CTGAACCTTCCAGCATCCAT+AGG | - | chr7_1:42193485-42193504 | None:intergenic | 50.0% | |
| GTTCATAGCTGCTGGCAACA+AGG | + | chr7_1:42193710-42193729 | Msa1019990:intron | 50.0% | |
| CGCAGTTTCCCAACATCACT+TGG | - | chr7_1:42193769-42193788 | None:intergenic | 50.0% | |
| TGATGTTGGGAAACTGCGCA+AGG | + | chr7_1:42193771-42193790 | Msa1019990:intron | 50.0% | |
| GATGTTGGGAAACTGCGCAA+GGG | + | chr7_1:42193772-42193791 | Msa1019990:intron | 50.0% | |
| TTCATGGTGATCCCTCCTGA+TGG | + | chr7_1:42193825-42193844 | Msa1019990:intron | 50.0% | |
| GCATTTGCATCCCCAGTGAT+TGG | + | chr7_1:42193962-42193981 | Msa1019990:intron | 50.0% | |
| TGATGTTGGGAAACTGCGCA+AGG | + | chr7_1:42193771-42193790 | Msa1019990:intron | 50.0% | |
| GATGTTGGGAAACTGCGCAA+GGG | + | chr7_1:42193772-42193791 | Msa1019990:intron | 50.0% | |
| GAAATCCCATCTGATGGCAG+TGG | + | chr7_1:42194347-42194366 | Msa1019990:intron | 50.0% | |
| TGTAGCCACTGCCATCAGAT+GGG | - | chr7_1:42194355-42194374 | None:intergenic | 50.0% | |
| TTGTAGCCACTGCCATCAGA+TGG | - | chr7_1:42194356-42194375 | None:intergenic | 50.0% | |
| CTCAATCATCCAGCATCGCT+AGG | - | chr7_1:42194719-42194738 | None:intergenic | 50.0% | |
| TTCCATTGTGAAGCACGACC+AGG | + | chr7_1:42194966-42194985 | Msa1019990:intron | 50.0% | |
| TTCCTGGTCGTGCTTCACAA+TGG | - | chr7_1:42194971-42194990 | None:intergenic | 50.0% | |
| TGTTGAGCATGTGCCTGACA+TGG | + | chr7_1:42195334-42195353 | Msa1019990:intron | 50.0% | |
| GCATGTGCCTGACATGGATA+TGG | + | chr7_1:42195340-42195359 | Msa1019990:intron | 50.0% | |
| CTCCACCATCATGGGATTCA+TGG | + | chr7_1:42195490-42195509 | Msa1019990:intron | 50.0% | |
| TGCCATGAATCCCATGATGG+TGG | - | chr7_1:42195495-42195514 | None:intergenic | 50.0% | |
| AGTACGTGGGTGCGTATTCA+TGG | - | chr7_1:42195675-42195694 | None:intergenic | 50.0% | |
| GCCATCACTGCTTTATGGGT+TGG | + | chr7_1:42195835-42195854 | Msa1019990:CDS | 50.0% | |
| GCCAACCCATAAAGCAGTGA+TGG | - | chr7_1:42195839-42195858 | None:intergenic | 50.0% | |
| CCATCAGCCAGCAATTTCGT+TGG | - | chr7_1:42196056-42196075 | None:intergenic | 50.0% | |
| ! | CCAACGAAATTGCTGGCTGA+TGG | + | chr7_1:42196053-42196072 | Msa1019990:intron | 50.0% |
| AGCTACGTTTGCAACTCTGC+AGG | + | chr7_1:42196177-42196196 | Msa1019990:intron | 50.0% | |
| AGGGCTTCTTGAGGACAAGT+AGG | - | chr7_1:42196870-42196889 | None:intergenic | 50.0% | |
| TGCAACAACAGGGCTTCTTG+AGG | - | chr7_1:42196879-42196898 | None:intergenic | 50.0% | |
| AATCCTCAAGGGACCACCTT+AGG | - | chr7_1:42197411-42197430 | None:intergenic | 50.0% | |
| GGTGGTCCCTTGAGGATTTA+TGG | + | chr7_1:42197413-42197432 | Msa1019990:intron | 50.0% | |
| TTGCATGGGCAAGGGAAGAA+GGG | - | chr7_1:42197464-42197483 | None:intergenic | 50.0% | |
| CAGCAAGTAGGTGGTTGCAT+GGG | - | chr7_1:42197478-42197497 | None:intergenic | 50.0% | |
| TCAGCAAGTAGGTGGTTGCA+TGG | - | chr7_1:42197479-42197498 | None:intergenic | 50.0% | |
| GGCATCAAATCCAGTTCGGT+AGG | + | chr7_1:42197521-42197540 | Msa1019990:intron | 50.0% | |
| CCTTGGAAACCATGAGATGG+AGG | - | chr7_1:42197586-42197605 | None:intergenic | 50.0% | |
| CCTCCATCTCATGGTTTCCA+AGG | + | chr7_1:42197583-42197602 | Msa1019990:intron | 50.0% | |
| GAGGGGGGACAAAAATGTTG+TGG | + | chr7_1:42197677-42197696 | Msa1019990:intron | 50.0% | |
| GGGGGGACAAAAATGTTGTG+GGG | + | chr7_1:42197679-42197698 | Msa1019990:intron | 50.0% | |
| GGGGGACAAAAATGTTGTGG+GGG | + | chr7_1:42197680-42197699 | Msa1019990:intron | 50.0% | |
| ACAGGGTAATCCCTGTTAGC+AGG | + | chr7_1:42197854-42197873 | Msa1019990:intron | 50.0% | |
| CAAGGAGTTGCCTGCTAACA+GGG | - | chr7_1:42197867-42197886 | None:intergenic | 50.0% | |
| TCAAGGAGTTGCCTGCTAAC+AGG | - | chr7_1:42197868-42197887 | None:intergenic | 50.0% | |
| TGTTAGCAGGCAACTCCTTG+AGG | + | chr7_1:42197867-42197886 | Msa1019990:intron | 50.0% | |
| !! | TAGTTCAGTGGTGGACCTCA+AGG | - | chr7_1:42197885-42197904 | None:intergenic | 50.0% |
| TTGAGGTCCACCACTGAACT+AGG | + | chr7_1:42197884-42197903 | Msa1019990:intron | 50.0% | |
| ! | TTGCACTGGCAAGACTAAGG+AGG | - | chr7_1:42198190-42198209 | None:intergenic | 50.0% |
| !! | ATGCAAAAGTGTCTGCCGTC+TGG | + | chr7_1:42198265-42198284 | Msa1019990:intron | 50.0% |
| CCATTACAGGATGTGCCAGA+CGG | - | chr7_1:42198283-42198302 | None:intergenic | 50.0% | |
| CCATTACAGGATGTGCCAGA+TGG | - | chr7_1:42198283-42198302 | None:intergenic | 50.0% | |
| CCATCTGGCACATCCTGTAA+TGG | + | chr7_1:42198371-42198390 | Msa1019990:intron | 50.0% | |
| GAGCATTTAGGAGGATAGGC+TGG | - | chr7_1:42198517-42198536 | None:intergenic | 50.0% | |
| CCTTGGCCTCAACAATATCC+TGG | - | chr7_1:42198654-42198673 | None:intergenic | 50.0% | |
| CCAGGATATTGTTGAGGCCA+AGG | + | chr7_1:42198651-42198670 | Msa1019990:intron | 50.0% | |
| GGCGGTGGAGTGATTTGAGA+AGG | - | chr7_1:42191782-42191801 | None:intergenic | 55.0% | |
| TTAGGGAGGACTCAGACTGG+CGG | - | chr7_1:42191835-42191854 | None:intergenic | 55.0% | |
| CGCAGTTTCCCAGCATCACT+TGG | - | chr7_1:42192472-42192491 | None:intergenic | 55.0% | |
| TGATGCTGGGAAACTGCGCA+AGG | + | chr7_1:42192474-42192493 | Msa1019990:intron | 55.0% | |
| GATGCTGGGAAACTGCGCAA+GGG | + | chr7_1:42192475-42192494 | Msa1019990:intron | 55.0% | |
| TGATGTTGGGAGACTGCGCA+AGG | + | chr7_1:42193068-42193087 | Msa1019990:intron | 55.0% | |
| GATGTTGGGAGACTGCGCAA+GGG | + | chr7_1:42193069-42193088 | Msa1019990:intron | 55.0% | |
| ! | GCTCTTCTTACGGTGCTGGA+AGG | + | chr7_1:42193409-42193428 | Msa1019990:intron | 55.0% |
| CTACATCTGCCTAGCGATGC+TGG | + | chr7_1:42194707-42194726 | Msa1019990:intron | 55.0% | |
| GGCCTACCTCTGTGCATTAG+TGG | + | chr7_1:42196907-42196926 | Msa1019990:intron | 55.0% | |
| GTTGCATGGGCAAGGGAAGA+AGG | - | chr7_1:42197465-42197484 | None:intergenic | 55.0% | |
| GTAGGTGGTTGCATGGGCAA+GGG | - | chr7_1:42197472-42197491 | None:intergenic | 55.0% | |
| AGTAGGTGGTTGCATGGGCA+AGG | - | chr7_1:42197473-42197492 | None:intergenic | 55.0% | |
| CACGCACCCCATCTTTGGAT+TGG | - | chr7_1:42197562-42197581 | None:intergenic | 55.0% | |
| CAATCCAAAGATGGGGTGCG+TGG | + | chr7_1:42197560-42197579 | Msa1019990:intron | 55.0% | |
| CCGTCTGGCACATCCTGTAA+TGG | + | chr7_1:42198280-42198299 | Msa1019990:intron | 55.0% | |
| CGGTTAGGGAGGACTCAGAC+TGG | - | chr7_1:42191838-42191857 | None:intergenic | 60.0% | |
| GACTTCGTCAGCGGTTAGGG+AGG | - | chr7_1:42191849-42191868 | None:intergenic | 60.0% | |
| TGCAAACGTAGCTCCGCCAC+TGG | - | chr7_1:42196170-42196189 | None:intergenic | 60.0% | |
| GGACCTAAGGTGGTCCCTTG+AGG | + | chr7_1:42197405-42197424 | Msa1019990:intron | 60.0% | |
| ACTCAGACTGGCGGCAGCAG+GGG | - | chr7_1:42191826-42191845 | None:intergenic | 65.0% | |
| GACTCAGACTGGCGGCAGCA+GGG | - | chr7_1:42191827-42191846 | None:intergenic | 65.0% | |
| GAGGCCACGCACCCCATCTT+TGG | - | chr7_1:42197567-42197586 | None:intergenic | 65.0% | |
| GGTGCGTGGCCTCCATCTCA+TGG | + | chr7_1:42197574-42197593 | Msa1019990:intron | 65.0% | |
| AGACTGGCGGCAGCAGGGGA+TGG | - | chr7_1:42191822-42191841 | None:intergenic | 70.0% | |
| GGACTCAGACTGGCGGCAGC+AGG | - | chr7_1:42191828-42191847 | None:intergenic | 70.0% | |
| ATGGCGGCGACGGTGAGGCG+CGG | - | chr7_1:42191803-42191822 | None:intergenic | 75.0% | |
| ! | AGGGGATGGCGGCGACGGTG+AGG | - | chr7_1:42191808-42191827 | None:intergenic | 75.0% |
| ! | GCAGCAGGGGATGGCGGCGA+CGG | - | chr7_1:42191813-42191832 | None:intergenic | 75.0% |
| CTGGCGGCAGCAGGGGATGG+CGG | - | chr7_1:42191819-42191838 | None:intergenic | 75.0% | |
| ! | GCGACGGTGAGGCGCGGCGG+TGG | - | chr7_1:42191797-42191816 | None:intergenic | 85.0% |
| ! | GCGGCGACGGTGAGGCGCGG+CGG | - | chr7_1:42191800-42191819 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 42191741 | 42199259 | 42191741 | ID=Msa1019990;Name=Msa1019990 |
| chr7_1 | mRNA | 42191741 | 42199259 | 42191741 | ID=Msa1019990-mRNA-1;Parent=Msa1019990;Name=Msa1019990-mRNA-1;_AED=0.17;_eAED=0.17;_QI=146|1|1|1|0.4|0.16|6|245|89 |
| chr7_1 | exon | 42191741 | 42191843 | 42191741 | ID=Msa1019990-mRNA-1:exon:8297;Parent=Msa1019990-mRNA-1 |
| chr7_1 | exon | 42191866 | 42191900 | 42191866 | ID=Msa1019990-mRNA-1:exon:8298;Parent=Msa1019990-mRNA-1 |
| chr7_1 | exon | 42195791 | 42195900 | 42195791 | ID=Msa1019990-mRNA-1:exon:8299;Parent=Msa1019990-mRNA-1 |
| chr7_1 | exon | 42196795 | 42196902 | 42196795 | ID=Msa1019990-mRNA-1:exon:8300;Parent=Msa1019990-mRNA-1 |
| chr7_1 | exon | 42198655 | 42198726 | 42198655 | ID=Msa1019990-mRNA-1:exon:8301;Parent=Msa1019990-mRNA-1 |
| chr7_1 | exon | 42199027 | 42199259 | 42199027 | ID=Msa1019990-mRNA-1:exon:8302;Parent=Msa1019990-mRNA-1 |
| chr7_1 | five_prime_UTR | 42191741 | 42191843 | 42191741 | ID=Msa1019990-mRNA-1:five_prime_utr;Parent=Msa1019990-mRNA-1 |
| chr7_1 | five_prime_UTR | 42191866 | 42191900 | 42191866 | ID=Msa1019990-mRNA-1:five_prime_utr;Parent=Msa1019990-mRNA-1 |
| chr7_1 | five_prime_UTR | 42195791 | 42195798 | 42195791 | ID=Msa1019990-mRNA-1:five_prime_utr;Parent=Msa1019990-mRNA-1 |
| chr7_1 | CDS | 42195799 | 42195900 | 42195799 | ID=Msa1019990-mRNA-1:cds;Parent=Msa1019990-mRNA-1 |
| chr7_1 | CDS | 42196795 | 42196902 | 42196795 | ID=Msa1019990-mRNA-1:cds;Parent=Msa1019990-mRNA-1 |
| chr7_1 | CDS | 42198655 | 42198714 | 42198655 | ID=Msa1019990-mRNA-1:cds;Parent=Msa1019990-mRNA-1 |
| chr7_1 | three_prime_UTR | 42198715 | 42198726 | 42198715 | ID=Msa1019990-mRNA-1:three_prime_utr;Parent=Msa1019990-mRNA-1 |
| chr7_1 | three_prime_UTR | 42199027 | 42199259 | 42199027 | ID=Msa1019990-mRNA-1:three_prime_utr;Parent=Msa1019990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
