AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069660 MtrunA17_Chr7g0251611 93.771 594 5 1 9 602 62 623 0.0 1114
Msa1069660 MtrunA17_Chr7g0214111 49.832 596 223 16 9 572 73 624 2.07e-151 451
Msa1069660 MtrunA17_Chr2g0311851 82.353 51 9 0 111 161 1 51 1.74e-19 83.6
Msa1069660 MtrunA17_Chr5g0421231 68.519 54 17 0 111 164 1 54 4.41e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069660 AT2G33490.2 44.186 602 245 15 9 584 62 598 1.78e-129 394
Msa1069660 AT2G33490.1 44.186 602 245 15 9 584 62 598 1.78e-129 394
Msa1069660 AT2G33490.3 44.186 602 245 15 9 584 62 598 2.50e-129 394
Msa1069660 AT3G26910.3 41.575 635 244 23 9 605 65 610 8.78e-109 341
Msa1069660 AT3G26910.1 42.251 613 228 22 9 584 65 588 5.59e-108 338
Msa1069660 AT3G26910.2 42.251 613 228 22 9 584 65 588 6.25e-108 338
Msa1069660 AT5G41100.2 42.211 597 214 23 9 584 64 550 7.14e-105 329
Msa1069660 AT5G41100.1 42.211 597 214 23 9 584 64 550 7.16e-105 329
Msa1069660 AT2G33490.4 42.596 493 222 15 119 584 7 465 2.36e-89 286

Find 127 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCGACGGACGTGGTAAC+TGG 0.140407 7_2:-65432839 None:intergenic
ACTCTCTTCATCATCATTTA+AGG 0.145979 7_2:-65429090 None:intergenic
TACGTGACTGGCCTTGTTTC+AGG 0.166849 7_2:-65431447 None:intergenic
TGCAGTGACTCCGAAAATTC+TGG 0.236257 7_2:-65429035 None:intergenic
ACTCTGCTCCTTTAGGATTA+AGG 0.248122 7_2:+65433141 Msa1069660:CDS
ATTGCCCAACAGAAAGAAAA+AGG 0.251587 7_2:+65431319 Msa1069660:CDS
GTAGGTCACTCTGCTCCTTT+AGG 0.312784 7_2:+65433134 Msa1069660:CDS
TTGTCTGTAAAACCTGTCTC+TGG 0.315486 7_2:+65432957 Msa1069660:CDS
CAACAGTTGTCTTACTTTCT+CGG 0.320793 7_2:-65432586 None:intergenic
GAAGCACCAGGAGATGCTTT+TGG 0.323518 7_2:-65433017 None:intergenic
GCCTTGCTGGTTTGATTAGC+AGG 0.323872 7_2:-65433095 None:intergenic
CGCTCGCCACCATGCTGCTC+AGG 0.334835 7_2:+65431486 Msa1069660:CDS
CAGATAGAGCTGATGCTCTC+TGG 0.346317 7_2:-65433379 None:intergenic
CTGATCCTAAGAAAATAAAA+AGG 0.360940 7_2:+65432901 Msa1069660:CDS
GACCTTCAGAAACTTGTTGA+TGG 0.361181 7_2:+65429259 Msa1069660:CDS
TTCGGAGTCACTGCAAGAAA+TGG 0.362580 7_2:+65429043 Msa1069660:CDS
TTATTAGTTGTAGGATGCTC+TGG 0.371727 7_2:-65433167 None:intergenic
TTTGTGGCATTCATCTCCTT+TGG 0.375192 7_2:+65432713 Msa1069660:CDS
GCTGATGCTCTCTGGGATAA+AGG 0.375335 7_2:-65433371 None:intergenic
AGTTGTCTTACTTTCTCGGC+TGG 0.375726 7_2:-65432582 None:intergenic
GTTTCTACCTCTGCTGAGTT+TGG 0.379005 7_2:-65431828 None:intergenic
CATCTTCAAGGCCACTGAAT+TGG 0.393461 7_2:-65431695 None:intergenic
ACTGTATGCAGGTAAAGTTT+TGG 0.402064 7_2:+65429213 Msa1069660:intron
GGTGGCGAGCGGCTTGTGTT+AGG 0.410078 7_2:-65431474 None:intergenic
CTTCACCATCATCATCTTCA+AGG 0.415415 7_2:-65431707 None:intergenic
ACGTGACTGGCCTTGTTTCA+GGG 0.423876 7_2:-65431446 None:intergenic
GGAGAGGAAGGTTGGGGTAT+CGG 0.425718 7_2:-65432996 None:intergenic
GGAGGAAATTTATTAGTTGT+AGG 0.427311 7_2:-65433176 None:intergenic
TTTGTTTCTTTGATGTTGAC+AGG 0.430714 7_2:-65432651 None:intergenic
CCAGTGATTTAAGTCCCTTC+CGG 0.430935 7_2:-65431620 None:intergenic
AAAGGAAGTACATAAGCATT+AGG 0.431746 7_2:-65432627 None:intergenic
CTCTGGGATAAAGGTGTTAG+TGG 0.435867 7_2:-65433362 None:intergenic
AGAAATGGGTACTTGTCTAT+TGG 0.445293 7_2:+65429058 Msa1069660:CDS
GTGCATCTTCACATGATTTG+TGG 0.445875 7_2:+65432697 Msa1069660:CDS
AGACTCCGATGGTCTGGTTA+TGG 0.446952 7_2:-65429401 None:intergenic
GCTGAATAGCTGCTGACTCT+TGG 0.450645 7_2:-65432531 None:intergenic
GTGATGGGTGGAGTTGGAAG+TGG 0.455552 7_2:-65433221 None:intergenic
TCTTTGATGTTGACAGGTAA+AGG 0.460642 7_2:-65432645 None:intergenic
CCTTGCTGGTTTGATTAGCA+GGG 0.462255 7_2:-65433094 None:intergenic
AAGAAGAGACTCCGATGGTC+TGG 0.465966 7_2:-65429407 None:intergenic
AGGCCGTTGAGCCACATGTT+AGG 0.471181 7_2:+65431643 Msa1069660:CDS
CTTTGAGAATAGAGACTCTA+GGG 0.472707 7_2:-65432791 None:intergenic
TGTCTGTAAAACCTGTCTCT+GGG 0.473932 7_2:+65432958 Msa1069660:CDS
AAAACTCAACTCGCCGCCTT+CGG 0.474937 7_2:-65431772 None:intergenic
AAATATAGTTGAATTTCTTC+CGG 0.476214 7_2:+65431601 Msa1069660:intron
TACTCACCAAATTCCAGAAA+AGG 0.476606 7_2:+65433319 Msa1069660:CDS
TCGGAGTCACTGCAAGAAAT+GGG 0.477885 7_2:+65429044 Msa1069660:CDS
GATGCTGAACTTGATACAAC+CGG 0.480386 7_2:-65433197 None:intergenic
TACAACTAATAAATTTCCTC+CGG 0.483430 7_2:+65433178 Msa1069660:CDS
CTCTGCTGAGTTTGGCGATG+TGG 0.485271 7_2:-65431820 None:intergenic
TCCTCTCCAAAAGCATCTCC+TGG 0.485455 7_2:+65433011 Msa1069660:CDS
TCTTTGAGAATAGAGACTCT+AGG 0.494289 7_2:-65432792 None:intergenic
TCTGCTGAGTTTGGCGATGT+GGG 0.496130 7_2:-65431819 None:intergenic
GACAATGGCTTATTAGTCAA+TGG 0.497368 7_2:-65432939 None:intergenic
AGATAGAGCTGATGCTCTCT+GGG 0.499905 7_2:-65433378 None:intergenic
TCATGTAGTTCACTTATCCT+AGG 0.507273 7_2:-65433059 None:intergenic
GAGACGGTGATGGGTGGAGT+TGG 0.511618 7_2:-65433227 None:intergenic
CGGTTAAAATCCCTGAAACA+AGG 0.515887 7_2:+65431436 Msa1069660:CDS
CTCCACCCATCACCGTCTCT+CGG 0.517320 7_2:+65433231 Msa1069660:CDS
ATAGAGACTCTAGGGATGGC+TGG 0.520252 7_2:-65432783 None:intergenic
ACAGCTCTCTGACTACTTGA+GGG 0.522828 7_2:-65433266 None:intergenic
TCTCTGACTACTTGAGGGTA+TGG 0.523866 7_2:-65433261 None:intergenic
ATAGTTGAATTTCTTCCGGA+AGG 0.528425 7_2:+65431605 Msa1069660:intron
TGTCGACGGACGTGGTAACT+GGG 0.532607 7_2:-65432838 None:intergenic
TAGTTGAATTTCTTCCGGAA+GGG 0.533301 7_2:+65431606 Msa1069660:intron
TCTGGATTCCTTAATCCTAA+AGG 0.534006 7_2:-65433149 None:intergenic
CACAGCTCTCTGACTACTTG+AGG 0.535951 7_2:-65433267 None:intergenic
GTTGTCTTACTTTCTCGGCT+GGG 0.536651 7_2:-65432581 None:intergenic
TTGATACTTTAAAATCTACA+TGG 0.539668 7_2:-65432497 None:intergenic
GAATAGCTGCTGACTCTTGG+TGG 0.543602 7_2:-65432528 None:intergenic
ACTTCAAGAAGAAAATCAAA+AGG 0.547746 7_2:-65429307 None:intergenic
TGAGAACGCTGTGGAACAGA+AGG 0.552060 7_2:-65429367 None:intergenic
GTCTGTAAAACCTGTCTCTG+GGG 0.553566 7_2:+65432959 Msa1069660:CDS
CTCCCCTTGTTTCTTCACCT+AGG 0.559756 7_2:+65433042 Msa1069660:CDS
CGTTGAGCCACATGTTAGGA+TGG 0.567832 7_2:+65431647 Msa1069660:CDS
TCTGTAAAACCTGTCTCTGG+GGG 0.571028 7_2:+65432960 Msa1069660:CDS
TTATCCTAGGTGAAGAAACA+AGG 0.571253 7_2:-65433046 None:intergenic
GAATACCTCTGCAGTTTCTG+TGG 0.577673 7_2:-65432128 None:intergenic
CCGGAAGGGACTTAAATCAC+TGG 0.581554 7_2:+65431620 Msa1069660:CDS
ACAAGGGGAGGAGAAGCACC+AGG 0.582384 7_2:-65433029 None:intergenic
TTGCTGGTTTGATTAGCAGG+GGG 0.582432 7_2:-65433092 None:intergenic
GAGTACGAGGCCACCGAAGG+CGG 0.582783 7_2:+65431759 Msa1069660:CDS
CTTGCTGGTTTGATTAGCAG+GGG 0.584609 7_2:-65433093 None:intergenic
GCAACAAAATCTTCTCGAGT+AGG 0.585066 7_2:+65433116 Msa1069660:CDS
CATATTGATTACCAATTCAG+TGG 0.587256 7_2:+65431684 Msa1069660:CDS
CTGAGCAGCATGGTGGCGAG+CGG 0.587516 7_2:-65431485 None:intergenic
AGTGAGTGTCCCTCTGTCGA+CGG 0.589507 7_2:-65432852 None:intergenic
GTGTTAGGAGACTACGTGAC+TGG 0.590317 7_2:-65431459 None:intergenic
AAAACTCCGAGAGACGGTGA+TGG 0.591752 7_2:-65433237 None:intergenic
TGCTCACGATGAATATGAAG+AGG 0.593231 7_2:+65431393 Msa1069660:CDS
AAACTCCGAGAGACGGTGAT+GGG 0.595274 7_2:-65433236 None:intergenic
CATCCTAACATGTGGCTCAA+CGG 0.595642 7_2:-65431646 None:intergenic
ACTCAACTCGCCGCCTTCGG+TGG 0.596372 7_2:-65431769 None:intergenic
CTCCGAGAGACGGTGATGGG+TGG 0.602920 7_2:-65433233 None:intergenic
TATGAGTACGAGGCCACCGA+AGG 0.609614 7_2:+65431756 Msa1069660:CDS
CTGCTGAGTTTGGCGATGTG+GGG 0.616627 7_2:-65431818 None:intergenic
TAATGAACTAAGAACCGTTG+AGG 0.626594 7_2:+65429429 Msa1069660:CDS
GAGAATAGAGACTCTAGGGA+TGG 0.627936 7_2:-65432787 None:intergenic
TATCCTAGGTGAAGAAACAA+GGG 0.628739 7_2:-65433045 None:intergenic
TTGAAGCTCGAATGTTTGAA+CGG 0.632977 7_2:-65432105 None:intergenic
TTACCACGTCCGTCGACAGA+GGG 0.641769 7_2:+65432843 Msa1069660:CDS
CCCTGCTAATCAAACCAGCA+AGG 0.644509 7_2:+65433094 Msa1069660:CDS
AGCCATCAACAAGTTTCTGA+AGG 0.647899 7_2:-65429261 None:intergenic
ACTGACCATAACCAGACCAT+CGG 0.653503 7_2:+65429396 Msa1069660:CDS
AGTGGCCTTGAAGATGATGA+TGG 0.653803 7_2:+65431702 Msa1069660:CDS
GTTACCACGTCCGTCGACAG+AGG 0.654948 7_2:+65432842 Msa1069660:CDS
TGGGATAAAGGTGTTAGTGG+AGG 0.663865 7_2:-65433359 None:intergenic
CTTGAAGATGATGATGGTGA+AGG 0.669025 7_2:+65431708 Msa1069660:CDS
CTCAAGTAGTCAGAGAGCTG+TGG 0.672080 7_2:+65433268 Msa1069660:CDS
GAAGGGACTTAAATCACTGG+AGG 0.677255 7_2:+65431623 Msa1069660:CDS
CACATCGCCAAACTCAGCAG+AGG 0.677853 7_2:+65431821 Msa1069660:CDS
GTAATCAATATGTTGCAACT+CGG 0.679247 7_2:-65431673 None:intergenic
TCATTAAGAAGAGACTCCGA+TGG 0.679806 7_2:-65429412 None:intergenic
GAGAACGCTGTGGAACAGAA+GGG 0.680576 7_2:-65429366 None:intergenic
AGTACATAAACATACCTCAA+CGG 0.682568 7_2:-65429443 None:intergenic
TCGGCAACCATCCTAACATG+TGG 0.683292 7_2:-65431654 None:intergenic
TCTCGCTCTAGTGAAATCCA+AGG 0.685168 7_2:+65433410 Msa1069660:CDS
TTAACAAAACCTGAGCAGCA+TGG 0.686630 7_2:-65431495 None:intergenic
TTAAATGATGATGAAGAGAG+TGG 0.705260 7_2:+65429092 Msa1069660:CDS
TGGGAATGAGTATGAGTACG+AGG 0.706985 7_2:+65431746 Msa1069660:CDS
TTCAACCACAGAAACTGCAG+AGG 0.710624 7_2:+65432123 Msa1069660:CDS
CTAGGTGAAGAAACAAGGGG+AGG 0.710991 7_2:-65433041 None:intergenic
ATCCTAGGTGAAGAAACAAG+GGG 0.711657 7_2:-65433044 None:intergenic
ACAAAACCTGAGCAGCATGG+TGG 0.713196 7_2:-65431492 None:intergenic
AGTGCTACATGAGAACGCTG+TGG 0.735573 7_2:-65429376 None:intergenic
GATGCACTTGCACTTAAGCG+TGG 0.741765 7_2:-65432681 None:intergenic
GCTGAACTTGATACAACCGG+AGG 0.762971 7_2:-65433194 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTGATAAAATTTTTT+TGG + chr7_2:65429982-65430001 Msa1069660:intron 10.0%
!!! CATTAATTTAGATTTTATAT+CGG + chr7_2:65430102-65430121 Msa1069660:intron 10.0%
!!! ATTAATTTAGATTTTATATC+GGG + chr7_2:65430103-65430122 Msa1069660:intron 10.0%
!!! CAATTAATTTAAGATTTAAA+TGG - chr7_2:65432185-65432204 None:intergenic 10.0%
!! TACTGAAATAAATTAAATGA+GGG - chr7_2:65429550-65429569 None:intergenic 15.0%
!! ATACTGAAATAAATTAAATG+AGG - chr7_2:65429551-65429570 None:intergenic 15.0%
!! GTAATTCATGAAATTTATAT+TGG + chr7_2:65429728-65429747 Msa1069660:intron 15.0%
!!! AAACATCTATTTTTAATTGT+TGG - chr7_2:65430330-65430349 None:intergenic 15.0%
!!! ACAATTAAAAATAGATGTTT+TGG + chr7_2:65430330-65430349 Msa1069660:intron 15.0%
!! AAAACAAAATCTCTATATTT+AGG + chr7_2:65432260-65432279 Msa1069660:intron 15.0%
!!! CAAATTAATAAAAGTATTAG+AGG - chr7_2:65432449-65432468 None:intergenic 15.0%
!!! TCTTGAATTTTGTATAAAAT+TGG + chr7_2:65433451-65433470 Msa1069660:intron 15.0%
!!! CTTGAATTTTGTATAAAATT+GGG + chr7_2:65433452-65433471 Msa1069660:intron 15.0%
!!! TTCTAATGAAACTTTTTTTT+AGG - chr7_2:65433704-65433723 None:intergenic 15.0%
!! AAATAAATTAAATGAGGGAA+AGG - chr7_2:65429545-65429564 None:intergenic 20.0%
!! TTAACAAAAGATAATGTACA+GGG + chr7_2:65429698-65429717 Msa1069660:intron 20.0%
!!! ATACATACTGATAATGTAAA+AGG - chr7_2:65429783-65429802 None:intergenic 20.0%
!! ATTATCAGTATGTATATTGT+TGG + chr7_2:65429788-65429807 Msa1069660:intron 20.0%
!! ATGAAATATATGATACAAGT+AGG - chr7_2:65430623-65430642 None:intergenic 20.0%
!! GTAGATATTTACTATAATAG+TGG + chr7_2:65430823-65430842 Msa1069660:intron 20.0%
!! AAATATAGTTGAATTTCTTC+CGG + chr7_2:65431601-65431620 Msa1069660:intron 20.0%
!! CAATATTACTCATAATTGTA+TGG + chr7_2:65431852-65431871 Msa1069660:intron 20.0%
!!! TTATTGCTTACCTTTTAAAA+AGG + chr7_2:65431913-65431932 Msa1069660:intron 20.0%
!! TTAATTGTAAAGTAAAATCC+AGG + chr7_2:65432198-65432217 Msa1069660:intron 20.0%
!! ATTATTTGACACCTAATTTA+TGG + chr7_2:65432322-65432341 Msa1069660:intron 20.0%
!!! ACTTTTATTAATTTGCCTTT+TGG + chr7_2:65432454-65432473 Msa1069660:intron 20.0%
!!! AATTTCTTTTCTGCAAATAT+TGG - chr7_2:65432558-65432577 None:intergenic 20.0%
!! AAATAAATAGTACTTTACCT+TGG - chr7_2:65433430-65433449 None:intergenic 20.0%
!!! CATTATTATTCTGAGAAATA+TGG + chr7_2:65433567-65433586 Msa1069660:intron 20.0%
!! AAAGTTTCATTAGAAAATAG+TGG + chr7_2:65433709-65433728 Msa1069660:intron 20.0%
!! TTAAAATAGTAGTAATGCAT+TGG + chr7_2:65434072-65434091 Msa1069660:intron 20.0%
!! GATACATATTCCAGAATTTT+CGG + chr7_2:65429025-65429044 Msa1069660:CDS 25.0%
! AAAGCTAGGTAATTTAGATA+TGG - chr7_2:65429144-65429163 None:intergenic 25.0%
! ACTTCAAGAAGAAAATCAAA+AGG - chr7_2:65429310-65429329 None:intergenic 25.0%
! ACATATATGCATTAACCATT+GGG - chr7_2:65429503-65429522 None:intergenic 25.0%
! TACATATATGCATTAACCAT+TGG - chr7_2:65429504-65429523 None:intergenic 25.0%
! GTTAACAAAAGATAATGTAC+AGG + chr7_2:65429697-65429716 Msa1069660:intron 25.0%
!!! ATGAAATTTATATTGGCTCA+GGG + chr7_2:65429735-65429754 Msa1069660:intron 25.0%
! ATATTTAGATCAATCTTCCT+GGG - chr7_2:65430970-65430989 None:intergenic 25.0%
! AATATTTAGATCAATCTTCC+TGG - chr7_2:65430971-65430990 None:intergenic 25.0%
!! ATATTCTCGAATTTTATGCT+TGG + chr7_2:65431002-65431021 Msa1069660:intron 25.0%
!!! TGTTTTATTCCAAATCAAAG+AGG - chr7_2:65431088-65431107 None:intergenic 25.0%
! ATAGAAAGAAAGTAAGATGT+AGG - chr7_2:65431158-65431177 None:intergenic 25.0%
!!! AATCTTTGAGATCCTTTTTT+CGG + chr7_2:65431539-65431558 Msa1069660:intron 25.0%
!!! TTTTAACTACAGATCAAACA+AGG + chr7_2:65431791-65431810 Msa1069660:CDS 25.0%
!! CTGTGAAATTCCTTTTTAAA+AGG - chr7_2:65431926-65431945 None:intergenic 25.0%
!! AACAAGTTGAATCATTAACT+CGG - chr7_2:65432046-65432065 None:intergenic 25.0%
! TTTAAATGGGAGTTTCAAAT+TGG - chr7_2:65432171-65432190 None:intergenic 25.0%
! TTGAAATATTGTAGTCCTAA+GGG - chr7_2:65432242-65432261 None:intergenic 25.0%
!! TTTGAAATATTGTAGTCCTA+AGG - chr7_2:65432243-65432262 None:intergenic 25.0%
! TAGACCAATATCCATAAATT+AGG - chr7_2:65432336-65432355 None:intergenic 25.0%
! GACTATGTAATTCTCATAAT+TGG + chr7_2:65432369-65432388 Msa1069660:intron 25.0%
!! AAAGTATCTCTAATTTGACT+TGG + chr7_2:65432418-65432437 Msa1069660:intron 25.0%
!! AAGTATCTCTAATTTGACTT+GGG + chr7_2:65432419-65432438 Msa1069660:intron 25.0%
! CTGATCCTAAGAAAATAAAA+AGG + chr7_2:65432901-65432920 Msa1069660:CDS 25.0%
! TACAACTAATAAATTTCCTC+CGG + chr7_2:65433178-65433197 Msa1069660:CDS 25.0%
! GAAAACAAGTAGCTAAATTT+CGG - chr7_2:65433483-65433502 None:intergenic 25.0%
!!! ATTACTTCATAAGTTGATTC+TGG - chr7_2:65433520-65433539 None:intergenic 25.0%
! AATGTTATGCTAACAAACTA+AGG - chr7_2:65433551-65433570 None:intergenic 25.0%
!! TATTCTGAGAAATATGGATT+AGG + chr7_2:65433573-65433592 Msa1069660:intron 25.0%
! ATAAACATGAGTTTGATGAA+GGG - chr7_2:65433749-65433768 None:intergenic 25.0%
! TATAAACATGAGTTTGATGA+AGG - chr7_2:65433750-65433769 None:intergenic 25.0%
! ATTTAACAGGTCATATTCAA+CGG - chr7_2:65433963-65433982 None:intergenic 25.0%
! TGAGAATTAAGCTATTTAAC+AGG - chr7_2:65433976-65433995 None:intergenic 25.0%
! GATTATCAATTTACAGAATG+AGG - chr7_2:65434191-65434210 None:intergenic 25.0%
ACTCTCTTCATCATCATTTA+AGG - chr7_2:65429093-65429112 None:intergenic 30.0%
! TTAAATGATGATGAAGAGAG+TGG + chr7_2:65429092-65429111 Msa1069660:CDS 30.0%
AATCAACTAGCATAAAAGCT+AGG - chr7_2:65429158-65429177 None:intergenic 30.0%
AGTACATAAACATACCTCAA+CGG - chr7_2:65429446-65429465 None:intergenic 30.0%
! TTTATTTAAAGCACACCCAA+TGG + chr7_2:65429485-65429504 Msa1069660:intron 30.0%
TAAATTAAATGAGGGAAAGG+TGG - chr7_2:65429542-65429561 None:intergenic 30.0%
!! CATGAAATTTATATTGGCTC+AGG + chr7_2:65429734-65429753 Msa1069660:intron 30.0%
!! TGAAATTTATATTGGCTCAG+GGG + chr7_2:65429736-65429755 Msa1069660:intron 30.0%
!! ATATTGTTGGTGACATATTC+TGG + chr7_2:65429801-65429820 Msa1069660:intron 30.0%
GTATACATATATATAACCCC+TGG - chr7_2:65429855-65429874 None:intergenic 30.0%
AGATCCAGAACTATATTGAA+CGG - chr7_2:65430011-65430030 None:intergenic 30.0%
GTGTAGTGTTTATAAAGCTT+GGG - chr7_2:65430171-65430190 None:intergenic 30.0%
TGTGTAGTGTTTATAAAGCT+TGG - chr7_2:65430172-65430191 None:intergenic 30.0%
! AAGCTTTATAAACACTACAC+AGG + chr7_2:65430171-65430190 Msa1069660:intron 30.0%
ACAACTTACTCAAATAAAGG+GGG - chr7_2:65430438-65430457 None:intergenic 30.0%
CACAACTTACTCAAATAAAG+GGG - chr7_2:65430439-65430458 None:intergenic 30.0%
CCACAACTTACTCAAATAAA+GGG - chr7_2:65430440-65430459 None:intergenic 30.0%
TCCACAACTTACTCAAATAA+AGG - chr7_2:65430441-65430460 None:intergenic 30.0%
! GAATATTGATTGTAGCCTTA+TGG + chr7_2:65430459-65430478 Msa1069660:intron 30.0%
CTCATTATATGACACTTACT+TGG - chr7_2:65430487-65430506 None:intergenic 30.0%
TTTAACACTCACTCTCTTAT+TGG + chr7_2:65430540-65430559 Msa1069660:intron 30.0%
TTAACACTCACTCTCTTATT+GGG + chr7_2:65430541-65430560 Msa1069660:intron 30.0%
TTATTGGGTGAAATACATGT+GGG + chr7_2:65430556-65430575 Msa1069660:intron 30.0%
ATACATTTGTAGTTGATCAC+TGG + chr7_2:65430758-65430777 Msa1069660:intron 30.0%
TACATTTGTAGTTGATCACT+GGG + chr7_2:65430759-65430778 Msa1069660:intron 30.0%
! TATAATAGTGGAGATTGAAG+CGG + chr7_2:65430835-65430854 Msa1069660:intron 30.0%
AGAATGATGAAAGAATACAG+TGG + chr7_2:65430896-65430915 Msa1069660:intron 30.0%
AAACTATGTCCTCTTTGATT+TGG + chr7_2:65431076-65431095 Msa1069660:intron 30.0%
TTTCTTTCTATTCATCATGC+AGG + chr7_2:65431167-65431186 Msa1069660:intron 30.0%
GAAATATTCACATGAGGATA+AGG - chr7_2:65431256-65431275 None:intergenic 30.0%
ATTCAGGAAATATTCACATG+AGG - chr7_2:65431262-65431281 None:intergenic 30.0%
GAAAGCAATACAGAAAATTC+AGG - chr7_2:65431278-65431297 None:intergenic 30.0%
GTAATCAATATGTTGCAACT+CGG - chr7_2:65431676-65431695 None:intergenic 30.0%
! CATATTGATTACCAATTCAG+TGG + chr7_2:65431684-65431703 Msa1069660:CDS 30.0%
!!! AAGGCAGTTTTGAATATGAT+GGG + chr7_2:65431727-65431746 Msa1069660:CDS 30.0%
AACAAATTCAATATGCACCT+GGG - chr7_2:65431887-65431906 None:intergenic 30.0%
AAACAAATTCAATATGCACC+TGG - chr7_2:65431888-65431907 None:intergenic 30.0%
TAGCATCTATAGTTGTAAAC+AGG - chr7_2:65431975-65431994 None:intergenic 30.0%
ATCATTGCTTATGTATTAGC+AGG + chr7_2:65432069-65432088 Msa1069660:intron 30.0%
GACACCTAATTTATGGATAT+TGG + chr7_2:65432329-65432348 Msa1069660:intron 30.0%
TGTAATTCTCATAATTGGCT+TGG + chr7_2:65432374-65432393 Msa1069660:intron 30.0%
! AAAGGAAGTACATAAGCATT+AGG - chr7_2:65432630-65432649 None:intergenic 30.0%
! TTTGTTTCTTTGATGTTGAC+AGG - chr7_2:65432654-65432673 None:intergenic 30.0%
CCTTTGGATGAAAAAAAGAA+CGG + chr7_2:65432729-65432748 Msa1069660:CDS 30.0%
CTTTGGATGAAAAAAAGAAC+GGG + chr7_2:65432730-65432749 Msa1069660:CDS 30.0%
GCATTAAAAATATCAACGTG+TGG - chr7_2:65432879-65432898 None:intergenic 30.0%
!!! GCATGCCTTTTTATTTTCTT+AGG - chr7_2:65432909-65432928 None:intergenic 30.0%
!! ATAAAAAGGCATGCATTTTC+AGG + chr7_2:65432915-65432934 Msa1069660:CDS 30.0%
GGAGGAAATTTATTAGTTGT+AGG - chr7_2:65433179-65433198 None:intergenic 30.0%
TCTTCTTCAACATTCAACTA+CGG - chr7_2:65433774-65433793 None:intergenic 30.0%
AGAAATACAATGCATCACTT+TGG - chr7_2:65433861-65433880 None:intergenic 30.0%
ATTGTATTTCTTCCACTCTA+TGG + chr7_2:65433870-65433889 Msa1069660:intron 30.0%
TTGTGAGATTCATGTTTAAC+TGG - chr7_2:65434014-65434033 None:intergenic 30.0%
TAAAATCGTGATAACCAACT+TGG - chr7_2:65434107-65434126 None:intergenic 30.0%
! ACGATTTTATTGCCATTCTT+GGG + chr7_2:65434118-65434137 Msa1069660:intron 30.0%
ATGATTGCATTGGAATATCA+TGG + chr7_2:65434143-65434162 Msa1069660:intron 30.0%
!!! CATTGATTTTCATGTAGTCA+AGG + chr7_2:65434243-65434262 Msa1069660:CDS 30.0%
AGAAATGGGTACTTGTCTAT+TGG + chr7_2:65429058-65429077 Msa1069660:CDS 35.0%
AGTTGTTATGAACTGTATGC+AGG + chr7_2:65429202-65429221 Msa1069660:intron 35.0%
! ACTGTATGCAGGTAAAGTTT+TGG + chr7_2:65429213-65429232 Msa1069660:intron 35.0%
! CTGTATGCAGGTAAAGTTTT+GGG + chr7_2:65429214-65429233 Msa1069660:intron 35.0%
! TGTATGCAGGTAAAGTTTTG+GGG + chr7_2:65429215-65429234 Msa1069660:intron 35.0%
TAATGAACTAAGAACCGTTG+AGG + chr7_2:65429429-65429448 Msa1069660:CDS 35.0%
ATGACTGTTGCTAGAAAATG+TGG + chr7_2:65429643-65429662 Msa1069660:intron 35.0%
ATCCAGAACTATATTGAACG+GGG - chr7_2:65430009-65430028 None:intergenic 35.0%
GATCCAGAACTATATTGAAC+GGG - chr7_2:65430010-65430029 None:intergenic 35.0%
! TGTCTCTGTATCTGGTTTAA+TGG + chr7_2:65430055-65430074 Msa1069660:intron 35.0%
! GTCTCTGTATCTGGTTTAAT+GGG + chr7_2:65430056-65430075 Msa1069660:intron 35.0%
CTTACTCATCCTTACAAAAC+CGG + chr7_2:65430127-65430146 Msa1069660:intron 35.0%
! GACATATCTCTAAGCATTGT+GGG + chr7_2:65430193-65430212 Msa1069660:intron 35.0%
AAGTCTTGCAAGATTCATTC+AGG - chr7_2:65430406-65430425 None:intergenic 35.0%
! CCCTTTATTTGAGTAAGTTG+TGG + chr7_2:65430437-65430456 Msa1069660:intron 35.0%
CTTATTGGGTGAAATACATG+TGG + chr7_2:65430555-65430574 Msa1069660:intron 35.0%
TCTAATAAGAGAGTGAGTGT+TGG + chr7_2:65430642-65430661 Msa1069660:intron 35.0%
! TGTGTTAAAATGAGTGTTGC+TGG + chr7_2:65430669-65430688 Msa1069660:intron 35.0%
GTCCATTAGTTAGTAATGTG+CGG + chr7_2:65430716-65430735 Msa1069660:intron 35.0%
AGGCATTAAGTTTGTGTAGA+AGG + chr7_2:65430791-65430810 Msa1069660:intron 35.0%
GGCATTAAGTTTGTGTAGAA+GGG + chr7_2:65430792-65430811 Msa1069660:intron 35.0%
TTTGTGTAGAAGGGATTTGA+GGG + chr7_2:65430801-65430820 Msa1069660:intron 35.0%
! TCTCAAACTTGAGCTTTGTA+AGG - chr7_2:65431050-65431069 None:intergenic 35.0%
AGCGTCAATGTGATGAAAAA+AGG + chr7_2:65431196-65431215 Msa1069660:CDS 35.0%
ATTGCCCAACAGAAAGAAAA+AGG + chr7_2:65431319-65431338 Msa1069660:CDS 35.0%
TTGCCCAACAGAAAGAAAAA+GGG + chr7_2:65431320-65431339 Msa1069660:CDS 35.0%
! CTTCCCTTTTTCTTTCTGTT+GGG - chr7_2:65431326-65431345 None:intergenic 35.0%
! ACTTCCCTTTTTCTTTCTGT+TGG - chr7_2:65431327-65431346 None:intergenic 35.0%
GAAAAAGGGAAGTCAAAAAG+TGG + chr7_2:65431334-65431353 Msa1069660:CDS 35.0%
ATCAAGACTAGACCGAAAAA+AGG - chr7_2:65431554-65431573 None:intergenic 35.0%
ATAGTTGAATTTCTTCCGGA+AGG + chr7_2:65431605-65431624 Msa1069660:intron 35.0%
TAGTTGAATTTCTTCCGGAA+GGG + chr7_2:65431606-65431625 Msa1069660:intron 35.0%
!!! GAAGGCAGTTTTGAATATGA+TGG + chr7_2:65431726-65431745 Msa1069660:CDS 35.0%
! TTGTATGGTTTTTAATGCCC+AGG + chr7_2:65431867-65431886 Msa1069660:intron 35.0%
! GTGATAGTAAGCTTTTGTGT+TGG - chr7_2:65432005-65432024 None:intergenic 35.0%
ATTGCTTATGTATTAGCAGG+TGG + chr7_2:65432072-65432091 Msa1069660:intron 35.0%
TTGAAGCTCGAATGTTTGAA+CGG - chr7_2:65432108-65432127 None:intergenic 35.0%
GTCTAAACTTGTCTACCAAA+AGG - chr7_2:65432472-65432491 None:intergenic 35.0%
CAACAGTTGTCTTACTTTCT+CGG - chr7_2:65432589-65432608 None:intergenic 35.0%
TCTTTGATGTTGACAGGTAA+AGG - chr7_2:65432648-65432667 None:intergenic 35.0%
!!! CCGTTCTTTTTTTCATCCAA+AGG - chr7_2:65432732-65432751 None:intergenic 35.0%
! CTTTGAGAATAGAGACTCTA+GGG - chr7_2:65432794-65432813 None:intergenic 35.0%
! TCTTTGAGAATAGAGACTCT+AGG - chr7_2:65432795-65432814 None:intergenic 35.0%
GACAATGGCTTATTAGTCAA+TGG - chr7_2:65432942-65432961 None:intergenic 35.0%
TATCCTAGGTGAAGAAACAA+GGG - chr7_2:65433048-65433067 None:intergenic 35.0%
TTATCCTAGGTGAAGAAACA+AGG - chr7_2:65433049-65433068 None:intergenic 35.0%
TCATGTAGTTCACTTATCCT+AGG - chr7_2:65433062-65433081 None:intergenic 35.0%
TCTGGATTCCTTAATCCTAA+AGG - chr7_2:65433152-65433171 None:intergenic 35.0%
TTATTAGTTGTAGGATGCTC+TGG - chr7_2:65433170-65433189 None:intergenic 35.0%
TACTCACCAAATTCCAGAAA+AGG + chr7_2:65433319-65433338 Msa1069660:CDS 35.0%
!!! CTTCAACCTTTTCTGGAATT+TGG - chr7_2:65433328-65433347 None:intergenic 35.0%
!! AATATGGATTAGGACATGTC+AGG + chr7_2:65433583-65433602 Msa1069660:intron 35.0%
!! ATATGGATTAGGACATGTCA+GGG + chr7_2:65433584-65433603 Msa1069660:intron 35.0%
AACTCACATTAGTGCATTTG+TGG + chr7_2:65433649-65433668 Msa1069660:intron 35.0%
AGTAGTAATGCATTGGAGTA+AGG + chr7_2:65434079-65434098 Msa1069660:intron 35.0%
! CACGATTTTATTGCCATTCT+TGG + chr7_2:65434117-65434136 Msa1069660:intron 35.0%
ATGCAATCATTTCCCAAGAA+TGG - chr7_2:65434133-65434152 None:intergenic 35.0%
TTCTTGGGAAATGATTGCAT+TGG + chr7_2:65434133-65434152 Msa1069660:intron 35.0%
! CGTAAACTTTTCAGAAACGA+AGG - chr7_2:65434284-65434303 None:intergenic 35.0%
!! GACCTTCAGAAACTTGTTGA+TGG + chr7_2:65429259-65429278 Msa1069660:CDS 40.0%
AGCCATCAACAAGTTTCTGA+AGG - chr7_2:65429264-65429283 None:intergenic 40.0%
! ATGGCTACGTAAGCTTTTGT+TGG + chr7_2:65429278-65429297 Msa1069660:CDS 40.0%
! TGGCTACGTAAGCTTTTGTT+GGG + chr7_2:65429279-65429298 Msa1069660:CDS 40.0%
TCATTAAGAAGAGACTCCGA+TGG - chr7_2:65429415-65429434 None:intergenic 40.0%
!! TATATTGGCTCAGGGGAAAA+TGG + chr7_2:65429743-65429762 Msa1069660:intron 40.0%
TCCAGAACTATATTGAACGG+GGG - chr7_2:65430008-65430027 None:intergenic 40.0%
TTATGCGTTGTCTCTGTATC+TGG + chr7_2:65430047-65430066 Msa1069660:intron 40.0%
!! CGGTTTTGTAAGGATGAGTA+AGG - chr7_2:65430129-65430148 None:intergenic 40.0%
! GGACATATCTCTAAGCATTG+TGG + chr7_2:65430192-65430211 Msa1069660:intron 40.0%
!! TGGAAATTCCGCATTGATTG+TGG - chr7_2:65430310-65430329 None:intergenic 40.0%
TTACTCAAATAAAGGGGGAG+GGG - chr7_2:65430433-65430452 None:intergenic 40.0%
CTTACTCAAATAAAGGGGGA+GGG - chr7_2:65430434-65430453 None:intergenic 40.0%
ACTTACTCAAATAAAGGGGG+AGG - chr7_2:65430435-65430454 None:intergenic 40.0%
GACACTTACTTGGAACCATA+AGG - chr7_2:65430477-65430496 None:intergenic 40.0%
! TGTGGGATCCATTTTCAATG+AGG - chr7_2:65430587-65430606 None:intergenic 40.0%
ATGGATCCCACATAACATAG+CGG + chr7_2:65430595-65430614 Msa1069660:intron 40.0%
CTCCGCACATTACTAACTAA+TGG - chr7_2:65430721-65430740 None:intergenic 40.0%
CATTAGTTAGTAATGTGCGG+AGG + chr7_2:65430719-65430738 Msa1069660:intron 40.0%
ATTTGTAGTTGATCACTGGG+TGG + chr7_2:65430762-65430781 Msa1069660:intron 40.0%
TGATCACTGGGTGGTTTATT+AGG + chr7_2:65430771-65430790 Msa1069660:intron 40.0%
GTTTGTGTAGAAGGGATTTG+AGG + chr7_2:65430800-65430819 Msa1069660:intron 40.0%
AATACAGTGGCAAGTAACAG+TGG + chr7_2:65430909-65430928 Msa1069660:intron 40.0%
ATATTGAGTAGAGCATACCC+AGG + chr7_2:65430950-65430969 Msa1069660:intron 40.0%
AGGGAAGTCAAAAAGTGGTA+AGG + chr7_2:65431339-65431358 Msa1069660:CDS 40.0%
GGGAAGTCAAAAAGTGGTAA+GGG + chr7_2:65431340-65431359 Msa1069660:CDS 40.0%
TGCTCACGATGAATATGAAG+AGG + chr7_2:65431393-65431412 Msa1069660:CDS 40.0%
! AAGCAACACTCTGTGCTTTT+CGG + chr7_2:65431416-65431435 Msa1069660:CDS 40.0%
CGGTTAAAATCCCTGAAACA+AGG + chr7_2:65431436-65431455 Msa1069660:CDS 40.0%
TTAACAAAACCTGAGCAGCA+TGG - chr7_2:65431498-65431517 None:intergenic 40.0%
CTTCACCATCATCATCTTCA+AGG - chr7_2:65431710-65431729 None:intergenic 40.0%
!! CTTGAAGATGATGATGGTGA+AGG + chr7_2:65431708-65431727 Msa1069660:CDS 40.0%
!! TTCACAGAAGCATTTCACTG+TGG + chr7_2:65431939-65431958 Msa1069660:intron 40.0%
AGTTGAGGAGCTTATTTACC+TGG - chr7_2:65432219-65432238 None:intergenic 40.0%
GTGCATCTTCACATGATTTG+TGG + chr7_2:65432697-65432716 Msa1069660:CDS 40.0%
TTTGTGGCATTCATCTCCTT+TGG + chr7_2:65432713-65432732 Msa1069660:CDS 40.0%
! AACGGGAAAGATTTTGCTGA+TGG + chr7_2:65432747-65432766 Msa1069660:CDS 40.0%
! GAGACAGGTTTTACAGACAA+TGG - chr7_2:65432957-65432976 None:intergenic 40.0%
TTGTCTGTAAAACCTGTCTC+TGG + chr7_2:65432957-65432976 Msa1069660:CDS 40.0%
TGTCTGTAAAACCTGTCTCT+GGG + chr7_2:65432958-65432977 Msa1069660:CDS 40.0%
ATCCTAGGTGAAGAAACAAG+GGG - chr7_2:65433047-65433066 None:intergenic 40.0%
! AGAAGATTTTGTTGCCTTGC+TGG - chr7_2:65433111-65433130 None:intergenic 40.0%
GCAACAAAATCTTCTCGAGT+AGG + chr7_2:65433116-65433135 Msa1069660:CDS 40.0%
!! ACTCTGCTCCTTTAGGATTA+AGG + chr7_2:65433141-65433160 Msa1069660:CDS 40.0%
GATGCTGAACTTGATACAAC+CGG - chr7_2:65433200-65433219 None:intergenic 40.0%
TATGGAAAAACTCCGAGAGA+CGG - chr7_2:65433246-65433265 None:intergenic 40.0%
TTCACAAGACTTTAGTCCAG+AGG - chr7_2:65433833-65433852 None:intergenic 40.0%
ATACAATGCATCACTTTGGC+AGG - chr7_2:65433857-65433876 None:intergenic 40.0%
TCGACAATGTAACCATAGAG+TGG - chr7_2:65433885-65433904 None:intergenic 40.0%
ATGCTGTTAATAGCTTCCTG+TGG + chr7_2:65433929-65433948 Msa1069660:intron 40.0%
TTAACTGGATCTAGAGAGCA+CGG - chr7_2:65433999-65434018 None:intergenic 40.0%
ATTGGAGTAAGGATCCAAGT+TGG + chr7_2:65434090-65434109 Msa1069660:intron 40.0%
TGCAGTGACTCCGAAAATTC+TGG - chr7_2:65429038-65429057 None:intergenic 45.0%
TTCGGAGTCACTGCAAGAAA+TGG + chr7_2:65429043-65429062 Msa1069660:CDS 45.0%
TCGGAGTCACTGCAAGAAAT+GGG + chr7_2:65429044-65429063 Msa1069660:CDS 45.0%
ATGATGAAGAGAGTGGTGAG+TGG + chr7_2:65429099-65429118 Msa1069660:intron 45.0%
TGATGAAGAGAGTGGTGAGT+GGG + chr7_2:65429100-65429119 Msa1069660:intron 45.0%
!!! GGTAAAGTTTTGGGGATGCT+TGG + chr7_2:65429223-65429242 Msa1069660:intron 45.0%
ACTGACCATAACCAGACCAT+CGG + chr7_2:65429396-65429415 Msa1069660:CDS 45.0%
! TGGTGACATATTCTGGTTGC+AGG + chr7_2:65429808-65429827 Msa1069660:intron 45.0%
! GGTGACATATTCTGGTTGCA+GGG + chr7_2:65429809-65429828 Msa1069660:intron 45.0%
! ACATATTCTGGTTGCAGGGA+TGG + chr7_2:65429813-65429832 Msa1069660:intron 45.0%
! TGGTTGCAGGGATGGATTTA+GGG + chr7_2:65429821-65429840 Msa1069660:intron 45.0%
AGAGACAACGCATAACCAAC+CGG - chr7_2:65430042-65430061 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr7_2:65430139-65430158 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr7_2:65430136-65430155 Msa1069660:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr7_2:65430142-65430161 Msa1069660:intron 45.0%
!! TTCATCGTGTTGGCTTTGAG+GGG - chr7_2:65430230-65430249 None:intergenic 45.0%
!! CTTCATCGTGTTGGCTTTGA+GGG - chr7_2:65430231-65430250 None:intergenic 45.0%
CTTCAACACCTTCATCGTGT+TGG - chr7_2:65430240-65430259 None:intergenic 45.0%
!! CAACACGATGAAGGTGTTGA+AGG + chr7_2:65430238-65430257 Msa1069660:intron 45.0%
GGGTTCCACCTCATTGAAAA+TGG + chr7_2:65430576-65430595 Msa1069660:intron 45.0%
! GGGATCCATTTTCAATGAGG+TGG - chr7_2:65430584-65430603 None:intergenic 45.0%
TGGATCCCACATAACATAGC+GGG + chr7_2:65430596-65430615 Msa1069660:intron 45.0%
TAGGTCCCGCTATGTTATGT+GGG - chr7_2:65430604-65430623 None:intergenic 45.0%
CCAGTGATTTAAGTCCCTTC+CGG - chr7_2:65431623-65431642 None:intergenic 45.0%
GAAGGGACTTAAATCACTGG+AGG + chr7_2:65431623-65431642 Msa1069660:CDS 45.0%
CATCCTAACATGTGGCTCAA+CGG - chr7_2:65431649-65431668 None:intergenic 45.0%
CATCTTCAAGGCCACTGAAT+TGG - chr7_2:65431698-65431717 None:intergenic 45.0%
! AGTGGCCTTGAAGATGATGA+TGG + chr7_2:65431702-65431721 Msa1069660:CDS 45.0%
TGGGAATGAGTATGAGTACG+AGG + chr7_2:65431746-65431765 Msa1069660:CDS 45.0%
GTTTCTACCTCTGCTGAGTT+TGG - chr7_2:65431831-65431850 None:intergenic 45.0%
TTCAACCACAGAAACTGCAG+AGG + chr7_2:65432123-65432142 Msa1069660:CDS 45.0%
GAATACCTCTGCAGTTTCTG+TGG - chr7_2:65432131-65432150 None:intergenic 45.0%
ATAAGCTCCTCAACTCCCTT+AGG + chr7_2:65432224-65432243 Msa1069660:intron 45.0%
TTGTAGTCCTAAGGGAGTTG+AGG - chr7_2:65432234-65432253 None:intergenic 45.0%
!! CATAATTGGCTTGGTCTAGC+TGG + chr7_2:65432383-65432402 Msa1069660:intron 45.0%
GTTGTCTTACTTTCTCGGCT+GGG - chr7_2:65432584-65432603 None:intergenic 45.0%
AGTTGTCTTACTTTCTCGGC+TGG - chr7_2:65432585-65432604 None:intergenic 45.0%
! GAGAATAGAGACTCTAGGGA+TGG - chr7_2:65432790-65432809 None:intergenic 45.0%
GTCTGTAAAACCTGTCTCTG+GGG + chr7_2:65432959-65432978 Msa1069660:CDS 45.0%
TCTGTAAAACCTGTCTCTGG+GGG + chr7_2:65432960-65432979 Msa1069660:CDS 45.0%
!! TGCTTTTGGAGAGGAAGGTT+GGG - chr7_2:65433006-65433025 None:intergenic 45.0%
!! ATGCTTTTGGAGAGGAAGGT+TGG - chr7_2:65433007-65433026 None:intergenic 45.0%
!! TTGCTGGTTTGATTAGCAGG+GGG - chr7_2:65433095-65433114 None:intergenic 45.0%
!! CTTGCTGGTTTGATTAGCAG+GGG - chr7_2:65433096-65433115 None:intergenic 45.0%
!! CCTTGCTGGTTTGATTAGCA+GGG - chr7_2:65433097-65433116 None:intergenic 45.0%
TCTCTGACTACTTGAGGGTA+TGG - chr7_2:65433264-65433283 None:intergenic 45.0%
ACAGCTCTCTGACTACTTGA+GGG - chr7_2:65433269-65433288 None:intergenic 45.0%
! GCAGCTTCTTCAACCTTTTC+TGG - chr7_2:65433335-65433354 None:intergenic 45.0%
!! TGGGATAAAGGTGTTAGTGG+AGG - chr7_2:65433362-65433381 None:intergenic 45.0%
!! CTCTGGGATAAAGGTGTTAG+TGG - chr7_2:65433365-65433384 None:intergenic 45.0%
AGATAGAGCTGATGCTCTCT+GGG - chr7_2:65433381-65433400 None:intergenic 45.0%
TCTCGCTCTAGTGAAATCCA+AGG + chr7_2:65433410-65433429 Msa1069660:CDS 45.0%
TTTAGTGTTGCACCTTCCTC+TGG + chr7_2:65433814-65433833 Msa1069660:intron 45.0%
CAAGACTTTAGTCCAGAGGA+AGG - chr7_2:65433829-65433848 None:intergenic 45.0%
GCATTGGAATATCATGGTGC+TGG + chr7_2:65434149-65434168 Msa1069660:intron 45.0%
!! ATATATATTAGATTATTATA+TGG - chr7_2:65429886-65429905 None:intergenic 5.0%
!!! AATTAATTTAAGATTTAAAT+GGG - chr7_2:65432184-65432203 None:intergenic 5.0%
GAGAACGCTGTGGAACAGAA+GGG - chr7_2:65429369-65429388 None:intergenic 50.0%
TGAGAACGCTGTGGAACAGA+AGG - chr7_2:65429370-65429389 None:intergenic 50.0%
AGTGCTACATGAGAACGCTG+TGG - chr7_2:65429379-65429398 None:intergenic 50.0%
AGACTCCGATGGTCTGGTTA+TGG - chr7_2:65429404-65429423 None:intergenic 50.0%
AAGAAGAGACTCCGATGGTC+TGG - chr7_2:65429410-65429429 None:intergenic 50.0%
! CTGGTTGCAGGGATGGATTT+AGG + chr7_2:65429820-65429839 Msa1069660:intron 50.0%
! GGTTGCAGGGATGGATTTAG+GGG + chr7_2:65429822-65429841 Msa1069660:intron 50.0%
GCCCCCGTTCAATATAGTTC+TGG + chr7_2:65430004-65430023 Msa1069660:intron 50.0%
AACGCATAACCAACCGGACA+GGG - chr7_2:65430036-65430055 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr7_2:65430141-65430160 Msa1069660:intron 50.0%
!! CCTTCATCGTGTTGGCTTTG+AGG - chr7_2:65430232-65430251 None:intergenic 50.0%
CCTCAAAGCCAACACGATGA+AGG + chr7_2:65430229-65430248 Msa1069660:intron 50.0%
! GGTGTTGAAGGCTGCAATGA+AGG + chr7_2:65430250-65430269 Msa1069660:intron 50.0%
AGGCAGCGATTACCGCAATT+AGG + chr7_2:65430270-65430289 Msa1069660:intron 50.0%
CAGCGATTACCGCAATTAGG+CGG + chr7_2:65430273-65430292 Msa1069660:intron 50.0%
TTACCGCAATTAGGCGGCTA+AGG + chr7_2:65430279-65430298 Msa1069660:intron 50.0%
TACCGCAATTAGGCGGCTAA+GGG + chr7_2:65430280-65430299 Msa1069660:intron 50.0%
AGGGCAGACCACAATCAATG+CGG + chr7_2:65430299-65430318 Msa1069660:intron 50.0%
GTAGGTCCCGCTATGTTATG+TGG - chr7_2:65430605-65430624 None:intergenic 50.0%
GATTGAAGCGGAACTGAGCA+AGG + chr7_2:65430847-65430866 Msa1069660:intron 50.0%
!! ACGTGACTGGCCTTGTTTCA+GGG - chr7_2:65431449-65431468 None:intergenic 50.0%
!! TACGTGACTGGCCTTGTTTC+AGG - chr7_2:65431450-65431469 None:intergenic 50.0%
GTGTTAGGAGACTACGTGAC+TGG - chr7_2:65431462-65431481 None:intergenic 50.0%
ACAAAACCTGAGCAGCATGG+TGG - chr7_2:65431495-65431514 None:intergenic 50.0%
CCGGAAGGGACTTAAATCAC+TGG + chr7_2:65431620-65431639 Msa1069660:CDS 50.0%
CGTTGAGCCACATGTTAGGA+TGG + chr7_2:65431647-65431666 Msa1069660:CDS 50.0%
TCGGCAACCATCCTAACATG+TGG - chr7_2:65431657-65431676 None:intergenic 50.0%
AAAACTCAACTCGCCGCCTT+CGG - chr7_2:65431775-65431794 None:intergenic 50.0%
TCTGCTGAGTTTGGCGATGT+GGG - chr7_2:65431822-65431841 None:intergenic 50.0%
!! GAATAGCTGCTGACTCTTGG+TGG - chr7_2:65432531-65432550 None:intergenic 50.0%
!! GCTGAATAGCTGCTGACTCT+TGG - chr7_2:65432534-65432553 None:intergenic 50.0%
GATGCACTTGCACTTAAGCG+TGG - chr7_2:65432684-65432703 None:intergenic 50.0%
! ATAGAGACTCTAGGGATGGC+TGG - chr7_2:65432786-65432805 None:intergenic 50.0%
!! CTGTCTCTGGGGGTTTTTCA+CGG + chr7_2:65432970-65432989 Msa1069660:CDS 50.0%
!! GCTTTTGGAGAGGAAGGTTG+GGG - chr7_2:65433005-65433024 None:intergenic 50.0%
!! GGAGATGCTTTTGGAGAGGA+AGG - chr7_2:65433011-65433030 None:intergenic 50.0%
!! TCCTCTCCAAAAGCATCTCC+TGG + chr7_2:65433011-65433030 Msa1069660:CDS 50.0%
!! ACCAGGAGATGCTTTTGGAG+AGG - chr7_2:65433015-65433034 None:intergenic 50.0%
!! GAAGCACCAGGAGATGCTTT+TGG - chr7_2:65433020-65433039 None:intergenic 50.0%
CTAGGTGAAGAAACAAGGGG+AGG - chr7_2:65433044-65433063 None:intergenic 50.0%
! CTCCCCTTGTTTCTTCACCT+AGG + chr7_2:65433042-65433061 Msa1069660:CDS 50.0%
GTTTGATTAGCAGGGGGTCT+AGG - chr7_2:65433089-65433108 None:intergenic 50.0%
CCCTGCTAATCAAACCAGCA+AGG + chr7_2:65433094-65433113 Msa1069660:CDS 50.0%
!! GCCTTGCTGGTTTGATTAGC+AGG - chr7_2:65433098-65433117 None:intergenic 50.0%
GTAGGTCACTCTGCTCCTTT+AGG + chr7_2:65433134-65433153 Msa1069660:CDS 50.0%
GCTGAACTTGATACAACCGG+AGG - chr7_2:65433197-65433216 None:intergenic 50.0%
AAACTCCGAGAGACGGTGAT+GGG - chr7_2:65433239-65433258 None:intergenic 50.0%
AAAACTCCGAGAGACGGTGA+TGG - chr7_2:65433240-65433259 None:intergenic 50.0%
CACAGCTCTCTGACTACTTG+AGG - chr7_2:65433270-65433289 None:intergenic 50.0%
CTCAAGTAGTCAGAGAGCTG+TGG + chr7_2:65433268-65433287 Msa1069660:CDS 50.0%
!! GCTGATGCTCTCTGGGATAA+AGG - chr7_2:65433374-65433393 None:intergenic 50.0%
CAGATAGAGCTGATGCTCTC+TGG - chr7_2:65433382-65433401 None:intergenic 50.0%
TTCAACGGCGCTAATACCAC+AGG - chr7_2:65433948-65433967 None:intergenic 50.0%
! TGCAGGGATGGATTTAGGGG+AGG + chr7_2:65429825-65429844 Msa1069660:intron 55.0%
! GCAGGGATGGATTTAGGGGA+GGG + chr7_2:65429826-65429845 Msa1069660:intron 55.0%
GATTTAGGGGAGGGCAACCA+GGG + chr7_2:65429835-65429854 Msa1069660:intron 55.0%
ATTTAGGGGAGGGCAACCAG+GGG + chr7_2:65429836-65429855 Msa1069660:intron 55.0%
! GTTCTGGATCTGTCCCTGTC+CGG + chr7_2:65430020-65430039 Msa1069660:intron 55.0%
CAACGCATAACCAACCGGAC+AGG - chr7_2:65430037-65430056 None:intergenic 55.0%
!! TCGTGTTGGCTTTGAGGGGA+GGG - chr7_2:65430226-65430245 None:intergenic 55.0%
!! ATCGTGTTGGCTTTGAGGGG+AGG - chr7_2:65430227-65430246 None:intergenic 55.0%
TGCCCTTAGCCGCCTAATTG+CGG - chr7_2:65430285-65430304 None:intergenic 55.0%
AGCGGAACTGAGCAAGGTGT+AGG + chr7_2:65430853-65430872 Msa1069660:intron 55.0%
GCGGAACTGAGCAAGGTGTA+GGG + chr7_2:65430854-65430873 Msa1069660:intron 55.0%
CGGAACTGAGCAAGGTGTAG+GGG + chr7_2:65430855-65430874 Msa1069660:intron 55.0%
AGGCCGTTGAGCCACATGTT+AGG + chr7_2:65431643-65431662 Msa1069660:CDS 55.0%
TATGAGTACGAGGCCACCGA+AGG + chr7_2:65431756-65431775 Msa1069660:CDS 55.0%
CTGCTGAGTTTGGCGATGTG+GGG - chr7_2:65431821-65431840 None:intergenic 55.0%
CTCTGCTGAGTTTGGCGATG+TGG - chr7_2:65431823-65431842 None:intergenic 55.0%
CACATCGCCAAACTCAGCAG+AGG + chr7_2:65431821-65431840 Msa1069660:CDS 55.0%
TGTCGACGGACGTGGTAACT+GGG - chr7_2:65432841-65432860 None:intergenic 55.0%
TTACCACGTCCGTCGACAGA+GGG + chr7_2:65432843-65432862 Msa1069660:CDS 55.0%
AGTGAGTGTCCCTCTGTCGA+CGG - chr7_2:65432855-65432874 None:intergenic 55.0%
CGTGAAAAACCCCCAGAGAC+AGG - chr7_2:65432972-65432991 None:intergenic 55.0%
GGAGAGGAAGGTTGGGGTAT+CGG - chr7_2:65432999-65433018 None:intergenic 55.0%
!! GTGATGGGTGGAGTTGGAAG+TGG - chr7_2:65433224-65433243 None:intergenic 55.0%
GGATTTAGGGGAGGGCAACC+AGG + chr7_2:65429834-65429853 Msa1069660:intron 60.0%
TGGATCTGTCCCTGTCCGGT+TGG + chr7_2:65430024-65430043 Msa1069660:intron 60.0%
GCAGCCCTCACCTTACAAGC+CGG - chr7_2:65430149-65430168 None:intergenic 60.0%
CTGTCGACGGACGTGGTAAC+TGG - chr7_2:65432842-65432861 None:intergenic 60.0%
GTTACCACGTCCGTCGACAG+AGG + chr7_2:65432842-65432861 Msa1069660:CDS 60.0%
!! ACAAGGGGAGGAGAAGCACC+AGG - chr7_2:65433032-65433051 None:intergenic 60.0%
!! GAGACGGTGATGGGTGGAGT+TGG - chr7_2:65433230-65433249 None:intergenic 60.0%
CTCCACCCATCACCGTCTCT+CGG + chr7_2:65433231-65433250 Msa1069660:CDS 60.0%
GGTGGCGAGCGGCTTGTGTT+AGG - chr7_2:65431477-65431496 None:intergenic 65.0%
! CTGAGCAGCATGGTGGCGAG+CGG - chr7_2:65431488-65431507 None:intergenic 65.0%
GAGTACGAGGCCACCGAAGG+CGG + chr7_2:65431759-65431778 Msa1069660:CDS 65.0%
ACTCAACTCGCCGCCTTCGG+TGG - chr7_2:65431772-65431791 None:intergenic 65.0%
TGTCCCTCTGTCGACGGACG+TGG - chr7_2:65432849-65432868 None:intergenic 65.0%
!! CTCCGAGAGACGGTGATGGG+TGG - chr7_2:65433236-65433255 None:intergenic 65.0%
CGCTCGCCACCATGCTGCTC+AGG + chr7_2:65431486-65431505 Msa1069660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65429014 65434306 65429014 ID=Msa1069660;Name=Msa1069660
chr7_2 mRNA 65429014 65434306 65429014 ID=Msa1069660-mRNA-1;Parent=Msa1069660;Name=Msa1069660-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.85|0.62|0.87|1|1|8|0|623
chr7_2 exon 65429014 65429113 65429014 ID=Msa1069660-mRNA-1:exon:13781;Parent=Msa1069660-mRNA-1
chr7_2 exon 65429224 65429450 65429224 ID=Msa1069660-mRNA-1:exon:13782;Parent=Msa1069660-mRNA-1
chr7_2 exon 65431189 65431217 65431189 ID=Msa1069660-mRNA-1:exon:13783;Parent=Msa1069660-mRNA-1
chr7_2 exon 65431300 65431507 65431300 ID=Msa1069660-mRNA-1:exon:13784;Parent=Msa1069660-mRNA-1
chr7_2 exon 65431609 65431842 65431609 ID=Msa1069660-mRNA-1:exon:13785;Parent=Msa1069660-mRNA-1
chr7_2 exon 65432091 65432144 65432091 ID=Msa1069660-mRNA-1:exon:13786;Parent=Msa1069660-mRNA-1
chr7_2 exon 65432480 65433431 65432480 ID=Msa1069660-mRNA-1:exon:13787;Parent=Msa1069660-mRNA-1
chr7_2 exon 65434239 65434306 65434239 ID=Msa1069660-mRNA-1:exon:13788;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65429014 65429113 65429014 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65429224 65429450 65429224 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65431189 65431217 65431189 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65431300 65431507 65431300 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65431609 65431842 65431609 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65432091 65432144 65432091 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65432480 65433431 65432480 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
chr7_2 CDS 65434239 65434306 65434239 ID=Msa1069660-mRNA-1:cds;Parent=Msa1069660-mRNA-1
Gene Sequence

>Msa1069660

ATCTTTGTTGTGATACATATTCCAGAATTTTCGGAGTCACTGCAAGAAATGGGTACTTGTCTATTGGAGAAAACTGCCTTAAATGATGATGAAGAGAGTGGTAAAGTTTTGGGGATGCTTGGAAATGTGCAGCTTGACCTTCAGAAACTTGTTGATGGCTACGTAAGCTTTTGTTGGGTGCAACCTTTTGATTTTCTTCTTGAAGTGCAATTCATTTACAAAAACTTTTATAATGACTCTATCCCTTCTGTTCCACAGCGTTCTCATGTAGCACTGACCATAACCAGACCATCGGAGTCTCTTCTTAATGAACTAAGAACCGTTGAGGACATGAAGCGTCAATGTGATGAAAAAAGAGAAGTTTATGAATATATGATTGCCCAACAGAAAGAAAAAGGGAAGTCAAAAAGTGGTAAGGGTGAAAATATAACTTCACAGCATTTGAAAGCTGCTCACGATGAATATGAAGAGGAAGCAACACTCTGTGCTTTTCGGTTAAAATCCCTGAAACAAGGCCAGTCACGTAGTCTCCTAACACAAGCCGCTCGCCACCATGCTGCTCAGTTGAATTTCTTCCGGAAGGGACTTAAATCACTGGAGGCCGTTGAGCCACATGTTAGGATGGTTGCCGAGTTGCAACATATTGATTACCAATTCAGTGGCCTTGAAGATGATGATGGTGAAGGCAGTTTTGAATATGATGGGAATGAGTATGAGTACGAGGCCACCGAAGGCGGCGAGTTGAGTTTTAACTACAGATCAAACAAGGATGTCCCCACATCGCCAAACTCAGCAGAGGTGGAAGAATCAGACCGTTCAAACATTCGAGCTTCAACCACAGAAACTGCAGAGACAAGTTTAGACAAGAGCCATGTAGATTTTAAAGTATCAAATAGAGATCCACCAAGAGTCAGCAGCTATTCAGCTCCAATATTTGCAGAAAAGAAATTTGACCCAGCCGAGAAAGTAAGACAACTGTTGTCATCATCTGCAGCAAAGCCTAATGCTTATGTACTTCCTTTACCTGTCAACATCAAAGAAACAAAAACTGCACCACGCTTAAGTGCAAGTGCATCTTCACATGATTTGTGGCATTCATCTCCTTTGGATGAAAAAAAGAACGGGAAAGATTTTGCTGATGGTAAACTGTCAGAACCAGCCATCCCTAGAGTCTCTATTCTCAAAGAAAGCAACAGTGACACTTCATCAGCCCAGTTACCACGTCCGTCGACAGAGGGACACTCACTTCCACACGTTGATATTTTTAATGCTTCTGATCCTAAGAAAATAAAAAGGCATGCATTTTCAGGTCCATTGACTAATAAGCCATTGTCTGTAAAACCTGTCTCTGGGGGTTTTTCACGGTTGCCGATACCCCAACCTTCCTCTCCAAAAGCATCTCCTGGTGCTTCTCCTCCCCTTGTTTCTTCACCTAGGATAAGTGAACTACATGAGCTTCCTAGACCCCCTGCTAATCAAACCAGCAAGGCAACAAAATCTTCTCGAGTAGGTCACTCTGCTCCTTTAGGATTAAGGAATCCAGAGCATCCTACAACTAATAAATTTCCTCCGGTTGTATCAAGTTCAGCATCTCCACTTCCAACTCCACCCATCACCGTCTCTCGGAGTTTTTCCATACCCTCAAGTAGTCAGAGAGCTGTGGTAATAAATGTTGCTAATAAGTATTTGCATACTCACCAAATTCCAGAAAAGGTTGAAGAAGCTGCATCACCTCCACTAACACCTTTATCCCAGAGAGCATCAGCTCTATCTGATTTAGCGTCTCGCTCTAGTGAAATCCAAGTTGTCATTGATTTTCATGTAGTCAAGGTTCTTTCTGATTGCTCCTTCGTTTCTGAAAAGTTTACGTAA

Protein sequence

>Msa1069660

IFVVIHIPEFSESLQEMGTCLLEKTALNDDEESGKVLGMLGNVQLDLQKLVDGYVSFCWVQPFDFLLEVQFIYKNFYNDSIPSVPQRSHVALTITRPSESLLNELRTVEDMKRQCDEKREVYEYMIAQQKEKGKSKSGKGENITSQHLKAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMVAELQHIDYQFSGLEDDDGEGSFEYDGNEYEYEATEGGELSFNYRSNKDVPTSPNSAEVEESDRSNIRASTTETAETSLDKSHVDFKVSNRDPPRVSSYSAPIFAEKKFDPAEKVRQLLSSSAAKPNAYVLPLPVNIKETKTAPRLSASASSHDLWHSSPLDEKKNGKDFADGKLSEPAIPRVSILKESNSDTSSAQLPRPSTEGHSLPHVDIFNASDPKKIKRHAFSGPLTNKPLSVKPVSGGFSRLPIPQPSSPKASPGASPPLVSSPRISELHELPRPPANQTSKATKSSRVGHSAPLGLRNPEHPTTNKFPPVVSSSASPLPTPPITVSRSFSIPSSSQRAVVINVANKYLHTHQIPEKVEEAASPPLTPLSQRASALSDLASRSSEIQVVIDFHVVKVLSDCSFVSEKFT*