Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021390 | XP_003622972.1 | 100.000 | 300 | 0 | 0 | 1 | 300 | 1 | 300 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021390 | sp|Q8GXU5|SDI1_ARATH | 63.514 | 296 | 101 | 3 | 10 | 300 | 13 | 306 | 5.59e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021390 | G7L2A9 | 100.000 | 300 | 0 | 0 | 1 | 300 | 1 | 300 | 0.0 | 612 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092380 | Msa1021390 | 0.824833 | 6.513489e-54 | -8.615850e-47 |
| Msa0902800 | Msa1021390 | 0.825854 | 3.736067e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021390 | MtrunA17_Chr7g0237581 | 100.000 | 300 | 0 | 0 | 1 | 300 | 1 | 300 | 0.0 | 612 |
| Msa1021390 | MtrunA17_Chr7g0237621 | 76.140 | 285 | 68 | 0 | 16 | 300 | 28 | 312 | 3.32e-161 | 451 |
| Msa1021390 | MtrunA17_Chr8g0371521 | 59.402 | 234 | 91 | 1 | 20 | 249 | 32 | 265 | 3.27e-96 | 292 |
| Msa1021390 | MtrunA17_Chr2g0292681 | 55.274 | 237 | 103 | 1 | 20 | 253 | 47 | 283 | 4.86e-86 | 270 |
| Msa1021390 | MtrunA17_Chr2g0292671 | 46.875 | 160 | 82 | 1 | 93 | 249 | 2 | 161 | 8.15e-45 | 150 |
| Msa1021390 | MtrunA17_Chr2g0292661 | 66.667 | 60 | 20 | 0 | 20 | 79 | 44 | 103 | 6.23e-23 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021390 | AT5G48850.1 | 63.514 | 296 | 101 | 3 | 10 | 300 | 13 | 306 | 5.69e-133 | 379 |
| Msa1021390 | AT1G04770.1 | 61.806 | 288 | 95 | 5 | 24 | 300 | 20 | 303 | 3.34e-123 | 355 |
| Msa1021390 | AT3G51280.1 | 60.494 | 243 | 91 | 2 | 11 | 249 | 18 | 259 | 2.73e-97 | 293 |
| Msa1021390 | AT4G20900.2 | 52.697 | 241 | 110 | 1 | 16 | 252 | 43 | 283 | 7.65e-83 | 256 |
| Msa1021390 | AT4G20900.1 | 49.416 | 257 | 110 | 2 | 16 | 252 | 43 | 299 | 1.37e-78 | 246 |
| Msa1021390 | AT5G44330.1 | 48.361 | 244 | 121 | 2 | 28 | 266 | 48 | 291 | 4.04e-72 | 230 |
| Msa1021390 | AT5G22794.2 | 65.672 | 67 | 23 | 0 | 101 | 167 | 71 | 137 | 4.85e-22 | 92.8 |
| Msa1021390 | AT5G22794.1 | 55.224 | 67 | 23 | 1 | 101 | 167 | 71 | 130 | 3.85e-15 | 73.2 |
Find 85 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCTGCAATTGTATTATTT+TGG | 0.119509 | 7_1:+45715376 | Msa1021390:CDS |
| ACCATGTCCATTGGATATTT+TGG | 0.119785 | 7_1:+45717696 | Msa1021390:CDS |
| AATAAAACCCTCCGCTATTA+TGG | 0.221371 | 7_1:-45717907 | None:intergenic |
| TGCAACAAAGCATGTAATTT+AGG | 0.247792 | 7_1:+45717526 | Msa1021390:CDS |
| ATTATTGATGATATATTAAA+AGG | 0.249303 | 7_1:+45717592 | Msa1021390:CDS |
| AAAAGCTTCATCTAATAAAA+TGG | 0.276246 | 7_1:+45713790 | Msa1021390:exon |
| TGCAATCTGGATCGATCATT+TGG | 0.281473 | 7_1:-45717507 | None:intergenic |
| CTTTGTGAGTTTCCCATTGA+AGG | 0.288568 | 7_1:-45716196 | None:intergenic |
| GTACTTTACAAGGTTCCTTA+TGG | 0.295390 | 7_1:+45713884 | Msa1021390:CDS |
| ACAAGAAACTTCGAGATTAC+TGG | 0.296020 | 7_1:+45716260 | Msa1021390:CDS |
| GAAGAAATCTCTTCAAATAT+TGG | 0.308219 | 7_1:-45717793 | None:intergenic |
| GGAAGTCTCTTTGATCTAAC+TGG | 0.308498 | 7_1:-45717772 | None:intergenic |
| GTTTCTTCAACTAGAGGAAT+AGG | 0.320442 | 7_1:-45713696 | None:intergenic |
| AAGGGACTCTTGGGATTGTT+TGG | 0.325497 | 7_1:-45715520 | None:intergenic |
| GGGGAAGAGGTGTATAAGAT+AGG | 0.357227 | 7_1:+45717939 | Msa1021390:three_prime_UTR |
| GTGAAATTCACTGCAATTCA+TGG | 0.362364 | 7_1:-45718051 | None:intergenic |
| AATAATACAATTGCAGCTTC+CGG | 0.365231 | 7_1:-45715372 | None:intergenic |
| GATGGCTTCGATGGCTTCTT+CGG | 0.366524 | 7_1:-45715475 | None:intergenic |
| AAGAGTTTGTTGTTATCAAA+AGG | 0.368485 | 7_1:+45713839 | Msa1021390:CDS |
| TTACATGCTTTGTTGCAATC+TGG | 0.369531 | 7_1:-45717520 | None:intergenic |
| TTGCTCAGGGAAACTTGGGC+TGG | 0.381221 | 7_1:+45717431 | Msa1021390:intron |
| ATATAATACCTGAGCATGTT+TGG | 0.383191 | 7_1:-45713927 | None:intergenic |
| TGCTCAGGGAAACTTGGGCT+GGG | 0.385141 | 7_1:+45717432 | Msa1021390:intron |
| TACATTATCAAGGGACTCTT+GGG | 0.394433 | 7_1:-45715529 | None:intergenic |
| TAGAACAGTTGATGAATGAA+TGG | 0.399710 | 7_1:+45717746 | Msa1021390:CDS |
| ATAATACAATTGCAGCTTCC+GGG | 0.400622 | 7_1:-45715371 | None:intergenic |
| AGAAAGAAAGAGAAAGAGAA+AGG | 0.404413 | 7_1:-45713663 | None:intergenic |
| CATTTATCATGTACTTTACA+AGG | 0.410162 | 7_1:+45713874 | Msa1021390:CDS |
| GCAATCTGGATCGATCATTT+GGG | 0.419818 | 7_1:-45717506 | None:intergenic |
| GTACATTATCAAGGGACTCT+TGG | 0.420472 | 7_1:-45715530 | None:intergenic |
| GAAAGAAAGAGAAAGAGAAA+GGG | 0.424751 | 7_1:-45713662 | None:intergenic |
| ATGATATCAAGTCAAAGAAA+AGG | 0.433262 | 7_1:+45717632 | Msa1021390:CDS |
| CTTGGGATTGTTTGGAGCAA+AGG | 0.450248 | 7_1:-45715512 | None:intergenic |
| AGGGATGTAATGAACCTAGA+TGG | 0.457305 | 7_1:-45713643 | None:intergenic |
| AGAGTTTGTTGTTATCAAAA+GGG | 0.458395 | 7_1:+45713840 | Msa1021390:CDS |
| CAAAGTGGATAGTGCTTTGA+AGG | 0.460051 | 7_1:+45715419 | Msa1021390:CDS |
| CAAAAGTGTAAATTGACTCA+TGG | 0.470976 | 7_1:+45718003 | Msa1021390:three_prime_UTR |
| TACCAAGGTGAGGCCTTCAA+TGG | 0.471174 | 7_1:+45716183 | Msa1021390:CDS |
| GATCAATTAGTACATTATCA+AGG | 0.471792 | 7_1:-45715539 | None:intergenic |
| ATATTAAAAGGAGAACTTCC+AGG | 0.490498 | 7_1:+45717604 | Msa1021390:CDS |
| GAAGCCATCTCTTCGTTTCG+CGG | 0.493778 | 7_1:+45715489 | Msa1021390:CDS |
| AGAACAGTTGATGAATGAAT+GGG | 0.494163 | 7_1:+45717747 | Msa1021390:CDS |
| GCATGTTTGGCTCTGACATA+AGG | 0.501138 | 7_1:-45713914 | None:intergenic |
| AAAAGTGTAAATTGACTCAT+GGG | 0.505060 | 7_1:+45718004 | Msa1021390:three_prime_UTR |
| TGATATCAAGTCAAAGAAAA+GGG | 0.512059 | 7_1:+45717633 | Msa1021390:CDS |
| TGTCAGAGCCAAACATGCTC+AGG | 0.519278 | 7_1:+45713919 | Msa1021390:CDS |
| AATAAAATGGAAGAAGAAAG+AGG | 0.525093 | 7_1:+45713803 | Msa1021390:exon |
| ACATGGACGCAAATCCATCT+AGG | 0.529825 | 7_1:+45713629 | None:intergenic |
| ACCAAGGTGAGGCCTTCAAT+GGG | 0.535059 | 7_1:+45716184 | Msa1021390:CDS |
| GCTACCTACACCATGTCCAT+TGG | 0.535286 | 7_1:+45717687 | Msa1021390:CDS |
| CTTGTGAATGATAGAAATGT+GGG | 0.542143 | 7_1:+45716112 | Msa1021390:intron |
| ACAAAGACTGCACGGTCTCA+TGG | 0.544318 | 7_1:+45716213 | Msa1021390:CDS |
| TCTTGTGAATGATAGAAATG+TGG | 0.545988 | 7_1:+45716111 | Msa1021390:intron |
| GATGAACTACGTGATGGCCG+AGG | 0.546796 | 7_1:+45717468 | Msa1021390:CDS |
| ATGGATGATGAGTTCATCAA+AGG | 0.547044 | 7_1:+45717721 | Msa1021390:CDS |
| ATCAATTAGTACATTATCAA+GGG | 0.551346 | 7_1:-45715538 | None:intergenic |
| ACATAAGGACTATCACCATA+AGG | 0.551394 | 7_1:-45713899 | None:intergenic |
| TCCATAACCAAAATATCCAA+TGG | 0.557682 | 7_1:-45717703 | None:intergenic |
| TGGATGATGAGTTCATCAAA+GGG | 0.558199 | 7_1:+45717722 | Msa1021390:CDS |
| AAACGAAGAGATGGCTTCGA+TGG | 0.560696 | 7_1:-45715484 | None:intergenic |
| TGATGGCCGAGGCGGTGTAT+CGG | 0.561508 | 7_1:+45717479 | Msa1021390:CDS |
| AATTATGTAGCTGGTAGAGA+AGG | 0.571802 | 7_1:+45715347 | Msa1021390:intron |
| TGTACTAATTGATCTTTACA+AGG | 0.593989 | 7_1:+45715548 | Msa1021390:CDS |
| GGCTTTCCGATACACCGCCT+CGG | 0.598573 | 7_1:-45717485 | None:intergenic |
| ATATCCAATGGACATGGTGT+AGG | 0.599504 | 7_1:-45717691 | None:intergenic |
| GACTTGATATCATCTGAACC+TGG | 0.599947 | 7_1:-45717622 | None:intergenic |
| GGATAGTGCTTTGAAGGACA+TGG | 0.604180 | 7_1:+45715425 | Msa1021390:CDS |
| TCCCATTGAAGGCCTCACCT+TGG | 0.604950 | 7_1:-45716185 | None:intergenic |
| AAGGCCGCGAAACGAAGAGA+TGG | 0.612021 | 7_1:-45715493 | None:intergenic |
| TTTGGAAAGCAATAAACGCA+GGG | 0.615385 | 7_1:+45715394 | Msa1021390:CDS |
| GTCTAATTGCTTCATCACCA+CGG | 0.618655 | 7_1:-45715448 | None:intergenic |
| TAGACAAGCACGGTATGAAG+AGG | 0.623521 | 7_1:+45717561 | Msa1021390:CDS |
| GAAATGTGGGAAAATAGATG+AGG | 0.623815 | 7_1:+45716125 | Msa1021390:intron |
| AAGCTGAAATTGATCTACCA+AGG | 0.632967 | 7_1:+45716168 | Msa1021390:CDS |
| GGAAACTCACAAAGACTGCA+CGG | 0.642060 | 7_1:+45716205 | Msa1021390:CDS |
| ACCAAAATATCCAATGGACA+TGG | 0.642301 | 7_1:-45717697 | None:intergenic |
| TATGTCTCATTAGACAAGCA+CGG | 0.651129 | 7_1:+45717551 | Msa1021390:CDS |
| GAAATTGATCTACCAAGGTG+AGG | 0.653987 | 7_1:+45716173 | Msa1021390:CDS |
| AATAAACGCAGGGGACAAAG+TGG | 0.662732 | 7_1:+45715404 | Msa1021390:CDS |
| TGCTTTGAAGGACATGGCCG+TGG | 0.662993 | 7_1:+45715431 | Msa1021390:CDS |
| GCAAAAGATGAACTACGTGA+TGG | 0.675060 | 7_1:+45717462 | Msa1021390:CDS |
| GAACTACGTGATGGCCGAGG+CGG | 0.675304 | 7_1:+45717471 | Msa1021390:CDS |
| TTGGAAAGCAATAAACGCAG+GGG | 0.691089 | 7_1:+45715395 | Msa1021390:CDS |
| GAACAGTTGATGAATGAATG+GGG | 0.700064 | 7_1:+45717748 | Msa1021390:CDS |
| GTAGCTGGTAGAGAAGGACC+CGG | 0.716450 | 7_1:+45715353 | Msa1021390:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACAAAATTTAATGTATT+TGG | - | chr7_1:45714410-45714429 | None:intergenic | 10.0% |
| !! | AAATAACAAATTATATAGTT+TGG | + | chr7_1:45714687-45714706 | Msa1021390:intron | 10.0% |
| !! | ACATTATATTGATATTATTA+GGG | - | chr7_1:45715326-45715345 | None:intergenic | 10.0% |
| !! | TTGTAAATTATCTTTATAAA+GGG | - | chr7_1:45715802-45715821 | None:intergenic | 10.0% |
| !! | TTTGTAAATTATCTTTATAA+AGG | - | chr7_1:45715803-45715822 | None:intergenic | 10.0% |
| !! | TTATTTCAAAACAAAATAAA+GGG | + | chr7_1:45716918-45716937 | Msa1021390:intron | 10.0% |
| !!! | ATTATTGATGATATATTAAA+AGG | + | chr7_1:45717592-45717611 | Msa1021390:CDS | 10.0% |
| !!! | AATTTGTTTATAATTGTAAC+CGG | + | chr7_1:45714363-45714382 | Msa1021390:intron | 15.0% |
| !! | GTACAAAAAAAAAAAAAATC+TGG | - | chr7_1:45714815-45714834 | None:intergenic | 15.0% |
| !!! | ATAATTTGTTGAAATTCAAA+TGG | + | chr7_1:45715017-45715036 | Msa1021390:intron | 15.0% |
| !! | CACATTATATTGATATTATT+AGG | - | chr7_1:45715327-45715346 | None:intergenic | 15.0% |
| !! | GATAATAATTTAGATTCAAT+TGG | + | chr7_1:45715612-45715631 | Msa1021390:intron | 15.0% |
| !! | CAAATATTTGATATACAATA+TGG | + | chr7_1:45715819-45715838 | Msa1021390:intron | 15.0% |
| !!! | AATATATATATTTTGACGTA+TGG | + | chr7_1:45715921-45715940 | Msa1021390:intron | 15.0% |
| !! | TAATATAAAATAAAGTGATG+TGG | + | chr7_1:45716408-45716427 | Msa1021390:intron | 15.0% |
| !! | AATATAAAATAAAGTGATGT+GGG | + | chr7_1:45716409-45716428 | Msa1021390:intron | 15.0% |
| !!! | TCGTATCTTATTTTTTTAAA+AGG | - | chr7_1:45716552-45716571 | None:intergenic | 15.0% |
| !! | CTTATTTCAAAACAAAATAA+AGG | + | chr7_1:45716917-45716936 | Msa1021390:intron | 15.0% |
| !! | AGTACAATTACATATATTAT+TGG | + | chr7_1:45717052-45717071 | Msa1021390:intron | 15.0% |
| !! | ATACAATAGAAATTTAAAGA+TGG | - | chr7_1:45717368-45717387 | None:intergenic | 15.0% |
| !! | TTAAATTTCTATTGTATACT+TGG | + | chr7_1:45717371-45717390 | Msa1021390:intron | 15.0% |
| !! | AAAAGCTTCATCTAATAAAA+TGG | + | chr7_1:45713790-45713809 | Msa1021390:exon | 20.0% |
| !! | GAAAGATATATTTATAGTAC+TGG | - | chr7_1:45714063-45714082 | None:intergenic | 20.0% |
| !! | ATTTGTTTATAATTGTAACC+GGG | + | chr7_1:45714364-45714383 | Msa1021390:intron | 20.0% |
| !!! | TCTGACTTTCTTTTATATAT+AGG | + | chr7_1:45714430-45714449 | Msa1021390:intron | 20.0% |
| !!! | ATTTTGATCTACTTTTAACT+CGG | - | chr7_1:45714504-45714523 | None:intergenic | 20.0% |
| !! | GTTTAGATAGATTTACATAA+AGG | + | chr7_1:45714649-45714668 | Msa1021390:intron | 20.0% |
| !! | TAACAAATTATATAGTTTGG+AGG | + | chr7_1:45714690-45714709 | Msa1021390:intron | 20.0% |
| !!! | ATGCTTGTTAATTTTGATAA+TGG | + | chr7_1:45714716-45714735 | Msa1021390:intron | 20.0% |
| !!! | TAGTTCAAATCTACATTTTA+GGG | - | chr7_1:45714790-45714809 | None:intergenic | 20.0% |
| !!! | TTAGTTCAAATCTACATTTT+AGG | - | chr7_1:45714791-45714810 | None:intergenic | 20.0% |
| !! | GAATTTCAACAAATTATAGA+GGG | - | chr7_1:45715014-45715033 | None:intergenic | 20.0% |
| !! | TGAATTTCAACAAATTATAG+AGG | - | chr7_1:45715015-45715034 | None:intergenic | 20.0% |
| !!! | TTAATTGGTTCGATTTTAAA+TGG | - | chr7_1:45715085-45715104 | None:intergenic | 20.0% |
| !! | ATCAATTAGTACATTATCAA+GGG | - | chr7_1:45715541-45715560 | None:intergenic | 20.0% |
| !!! | TACAAACTTTTACCATTTTA+CGG | + | chr7_1:45715718-45715737 | Msa1021390:intron | 20.0% |
| !!! | TATATTTTTCCGATATGTAA+CGG | - | chr7_1:45715907-45715926 | None:intergenic | 20.0% |
| !! | TATCTATAAGTATCATAGTT+AGG | + | chr7_1:45716448-45716467 | Msa1021390:intron | 20.0% |
| !! | TTATTCAATATGATTTGATG+TGG | - | chr7_1:45716527-45716546 | None:intergenic | 20.0% |
| !! | ACATCAAATCATATTGAATA+AGG | + | chr7_1:45716526-45716545 | Msa1021390:intron | 20.0% |
| !!! | AATTTCCACTCTAATTATTT+TGG | - | chr7_1:45716720-45716739 | None:intergenic | 20.0% |
| !! | TAACTGTATATTAAAGTAAC+TGG | - | chr7_1:45716801-45716820 | None:intergenic | 20.0% |
| !!! | AGTTACTTTAATATACAGTT+AGG | + | chr7_1:45716800-45716819 | Msa1021390:intron | 20.0% |
| !!! | ATCTTTTCTATATGAGAATT+AGG | - | chr7_1:45717084-45717103 | None:intergenic | 20.0% |
| !!! | ATTTTGTACATAGCTTTTTT+TGG | + | chr7_1:45717850-45717869 | Msa1021390:three_prime_UTR | 20.0% |
| !!! | AGGGTTTTATTTTCATTTTT+GGG | + | chr7_1:45717919-45717938 | Msa1021390:three_prime_UTR | 20.0% |
| !! | TTATTAGATGAAGCTTTTTG+AGG | - | chr7_1:45713788-45713807 | None:intergenic | 25.0% |
| ! | AATAAAATGGAAGAAGAAAG+AGG | + | chr7_1:45713803-45713822 | Msa1021390:exon | 25.0% |
| !!! | AAGAGTTTGTTGTTATCAAA+AGG | + | chr7_1:45713839-45713858 | Msa1021390:CDS | 25.0% |
| !!! | AGAGTTTGTTGTTATCAAAA+GGG | + | chr7_1:45713840-45713859 | Msa1021390:CDS | 25.0% |
| ! | CATTTATCATGTACTTTACA+AGG | + | chr7_1:45713874-45713893 | Msa1021390:CDS | 25.0% |
| ! | ACTAAAAATAATACCGTCTT+CGG | + | chr7_1:45714173-45714192 | Msa1021390:intron | 25.0% |
| !! | CTTGTACATAAGAGAAATTT+TGG | + | chr7_1:45714207-45714226 | Msa1021390:intron | 25.0% |
| !!! | CAATTTTTTAACCAAATACC+CGG | - | chr7_1:45714385-45714404 | None:intergenic | 25.0% |
| ! | TATCAGATGTAGTATATTTC+CGG | + | chr7_1:45714457-45714476 | Msa1021390:intron | 25.0% |
| ! | AGTATATGTTTATGTTCATC+AGG | - | chr7_1:45714577-45714596 | None:intergenic | 25.0% |
| ! | AAAAGTGAGATATATAAGTG+AGG | + | chr7_1:45714618-45714637 | Msa1021390:intron | 25.0% |
| ! | CATGTATAGTTAATATGTAG+TGG | + | chr7_1:45714858-45714877 | Msa1021390:intron | 25.0% |
| !!! | AAATTAACTGCATTTTTTCC+TGG | + | chr7_1:45714969-45714988 | Msa1021390:intron | 25.0% |
| !!! | AATTAACTGCATTTTTTCCT+GGG | + | chr7_1:45714970-45714989 | Msa1021390:intron | 25.0% |
| ! | TTTCCAACACACTATTTAAT+TGG | - | chr7_1:45715100-45715119 | None:intergenic | 25.0% |
| !!! | CTTAATTTTAATTGAAGACG+AGG | - | chr7_1:45715160-45715179 | None:intergenic | 25.0% |
| ! | GCAAAAGAACTTGTAATTTA+AGG | - | chr7_1:45715257-45715276 | None:intergenic | 25.0% |
| ! | TATAATGTGAATTATGTAGC+TGG | + | chr7_1:45715338-45715357 | Msa1021390:intron | 25.0% |
| !! | AAGCTGCAATTGTATTATTT+TGG | + | chr7_1:45715376-45715395 | Msa1021390:CDS | 25.0% |
| ! | GATCAATTAGTACATTATCA+AGG | - | chr7_1:45715542-45715561 | None:intergenic | 25.0% |
| ! | TGTACTAATTGATCTTTACA+AGG | + | chr7_1:45715548-45715567 | Msa1021390:CDS | 25.0% |
| !!! | ACTTTTAAGGTAAACATTGA+CGG | - | chr7_1:45715666-45715685 | None:intergenic | 25.0% |
| ! | AGTTTCTAAACCATTTAGTT+AGG | + | chr7_1:45715867-45715886 | Msa1021390:intron | 25.0% |
| !! | ATATTTTTCCGATATGTAAC+GGG | - | chr7_1:45715906-45715925 | None:intergenic | 25.0% |
| !!! | ATATATTTTGACGTATGGAT+TGG | + | chr7_1:45715926-45715945 | Msa1021390:intron | 25.0% |
| !!! | ATAGCTTGTAATTGATTTGT+TGG | + | chr7_1:45715982-45716001 | Msa1021390:intron | 25.0% |
| ! | ATAATGTGTAATCAAAAGAG+AGG | - | chr7_1:45716305-45716324 | None:intergenic | 25.0% |
| ! | TTTACATTAACATTCTGCAA+AGG | - | chr7_1:45716335-45716354 | None:intergenic | 25.0% |
| ! | TAACACCAAAATAATTAGAG+TGG | + | chr7_1:45716712-45716731 | Msa1021390:intron | 25.0% |
| ! | ATTAGAGTGGAAATTTAAGA+TGG | + | chr7_1:45716725-45716744 | Msa1021390:intron | 25.0% |
| !! | TGGAAATTTAAGATGGAATT+TGG | + | chr7_1:45716732-45716751 | Msa1021390:intron | 25.0% |
| !!! | TGAGTTTTGTACTTTAAGTA+TGG | + | chr7_1:45716888-45716907 | Msa1021390:intron | 25.0% |
| ! | TTATATCAAAGTCTATCGTT+CGG | + | chr7_1:45717173-45717192 | Msa1021390:intron | 25.0% |
| ! | TATATTTCAATGTGTGACTT+GGG | - | chr7_1:45717268-45717287 | None:intergenic | 25.0% |
| ! | TTATATTTCAATGTGTGACT+TGG | - | chr7_1:45717269-45717288 | None:intergenic | 25.0% |
| ! | AAGTCACACATTGAAATATA+AGG | + | chr7_1:45717268-45717287 | Msa1021390:intron | 25.0% |
| ! | TTGAAATATAAGGTATGACT+AGG | + | chr7_1:45717278-45717297 | Msa1021390:intron | 25.0% |
| ! | TGAAATATAAGGTATGACTA+GGG | + | chr7_1:45717279-45717298 | Msa1021390:intron | 25.0% |
| ! | AAATCTAACCTAGAAAAGTA+TGG | - | chr7_1:45717340-45717359 | None:intergenic | 25.0% |
| ! | CAATAGAAATTTAAAGATGG+AGG | - | chr7_1:45717365-45717384 | None:intergenic | 25.0% |
| ! | ATGATATCAAGTCAAAGAAA+AGG | + | chr7_1:45717632-45717651 | Msa1021390:CDS | 25.0% |
| ! | TGATATCAAGTCAAAGAAAA+GGG | + | chr7_1:45717633-45717652 | Msa1021390:CDS | 25.0% |
| ! | GAAGAAATCTCTTCAAATAT+TGG | - | chr7_1:45717796-45717815 | None:intergenic | 25.0% |
| !! | TTCTTTCTTTTCCATAATAG+CGG | + | chr7_1:45717896-45717915 | Msa1021390:three_prime_UTR | 25.0% |
| !!! | GAGGGTTTTATTTTCATTTT+TGG | + | chr7_1:45717918-45717937 | Msa1021390:three_prime_UTR | 25.0% |
| !!! | GGGTTTTATTTTCATTTTTG+GGG | + | chr7_1:45717920-45717939 | Msa1021390:three_prime_UTR | 25.0% |
| !! | AAAAGTGTAAATTGACTCAT+GGG | + | chr7_1:45718004-45718023 | Msa1021390:three_prime_UTR | 25.0% |
| GAAAGAAAGAGAAAGAGAAA+GGG | - | chr7_1:45713665-45713684 | None:intergenic | 30.0% | |
| AGAAAGAAAGAGAAAGAGAA+AGG | - | chr7_1:45713666-45713685 | None:intergenic | 30.0% | |
| !!! | TTTTGAGTTTCTTCAACTAG+AGG | - | chr7_1:45713705-45713724 | None:intergenic | 30.0% |
| ATATAATACCTGAGCATGTT+TGG | - | chr7_1:45713930-45713949 | None:intergenic | 30.0% | |
| ! | TGTGTCATTAATCAAAGACA+AGG | - | chr7_1:45713982-45714001 | None:intergenic | 30.0% |
| TTGTAGACCAACTTTGATTA+GGG | + | chr7_1:45714095-45714114 | Msa1021390:intron | 30.0% | |
| ! | ATGTTTTCCCTAATCAAAGT+TGG | - | chr7_1:45714105-45714124 | None:intergenic | 30.0% |
| CTTTGATTAGGGAAAACATT+TGG | + | chr7_1:45714106-45714125 | Msa1021390:intron | 30.0% | |
| TATAATTGTAACCGGGTATT+TGG | + | chr7_1:45714371-45714390 | Msa1021390:intron | 30.0% | |
| CGGGTATTTGGTTAAAAAAT+TGG | + | chr7_1:45714383-45714402 | Msa1021390:intron | 30.0% | |
| ATCAGATGTAGTATATTTCC+GGG | + | chr7_1:45714458-45714477 | Msa1021390:intron | 30.0% | |
| ! | TCAAATAAGTTTTTGTTCCC+CGG | - | chr7_1:45714479-45714498 | None:intergenic | 30.0% |
| !! | GATAATGGATTCAAGCAATT+TGG | + | chr7_1:45714731-45714750 | Msa1021390:intron | 30.0% |
| ACTATACATGCAACAAAATC+TGG | - | chr7_1:45714848-45714867 | None:intergenic | 30.0% | |
| !!! | ATATGTAGTGGTTTTGAATC+AGG | + | chr7_1:45714870-45714889 | Msa1021390:intron | 30.0% |
| !!! | TATGTAGTGGTTTTGAATCA+GGG | + | chr7_1:45714871-45714890 | Msa1021390:intron | 30.0% |
| GAACCAATTAAATAGTGTGT+TGG | + | chr7_1:45715094-45715113 | Msa1021390:intron | 30.0% | |
| TTTAATTGAAGACGAGGTTA+CGG | - | chr7_1:45715154-45715173 | None:intergenic | 30.0% | |
| ! | GTAAGAAATTTGAGAGGTAT+AGG | - | chr7_1:45715279-45715298 | None:intergenic | 30.0% |
| AATAATACAATTGCAGCTTC+CGG | - | chr7_1:45715375-45715394 | None:intergenic | 30.0% | |
| !!! | CTTTTTTACGAACCGTAAAA+TGG | - | chr7_1:45715733-45715752 | None:intergenic | 30.0% |
| AGAAAGAACTCCTAACTAAA+TGG | - | chr7_1:45715880-45715899 | None:intergenic | 30.0% | |
| ! | TACATTCATTGCTGATTAAC+AGG | - | chr7_1:45716013-45716032 | None:intergenic | 30.0% |
| TCTTGTGAATGATAGAAATG+TGG | + | chr7_1:45716111-45716130 | Msa1021390:intron | 30.0% | |
| CTTGTGAATGATAGAAATGT+GGG | + | chr7_1:45716112-45716131 | Msa1021390:intron | 30.0% | |
| TGTAGTGTATAATCATAACC+TGG | - | chr7_1:45716593-45716612 | None:intergenic | 30.0% | |
| TTCTGTGAATAGATTCCATA+TGG | + | chr7_1:45716644-45716663 | Msa1021390:intron | 30.0% | |
| TCTGTGAATAGATTCCATAT+GGG | + | chr7_1:45716645-45716664 | Msa1021390:intron | 30.0% | |
| GAGATACTTGTAGTTTAAGT+CGG | + | chr7_1:45716774-45716793 | Msa1021390:intron | 30.0% | |
| TCAAAACAAAATAAAGGGTG+TGG | + | chr7_1:45716923-45716942 | Msa1021390:intron | 30.0% | |
| ! | ATCAAGTTTTACTTATCTCC+CGG | + | chr7_1:45716961-45716980 | Msa1021390:intron | 30.0% |
| GTATGGAAACAAACAAAACT+AGG | - | chr7_1:45717323-45717342 | None:intergenic | 30.0% | |
| ! | GTTTGTTTCCATACTTTTCT+AGG | + | chr7_1:45717329-45717348 | Msa1021390:intron | 30.0% |
| ACATAGGTACAAACAAATCT+TGG | - | chr7_1:45717399-45717418 | None:intergenic | 30.0% | |
| GCAAAAATGTGTAGATACAT+AGG | - | chr7_1:45717415-45717434 | None:intergenic | 30.0% | |
| ! | TATCTACACATTTTTGCTCA+GGG | + | chr7_1:45717418-45717437 | Msa1021390:intron | 30.0% |
| TGCAACAAAGCATGTAATTT+AGG | + | chr7_1:45717526-45717545 | Msa1021390:CDS | 30.0% | |
| ATATTAAAAGGAGAACTTCC+AGG | + | chr7_1:45717604-45717623 | Msa1021390:CDS | 30.0% | |
| !!! | TCCATTGGATATTTTGGTTA+TGG | + | chr7_1:45717702-45717721 | Msa1021390:CDS | 30.0% |
| TCCATAACCAAAATATCCAA+TGG | - | chr7_1:45717706-45717725 | None:intergenic | 30.0% | |
| !! | TAGAACAGTTGATGAATGAA+TGG | + | chr7_1:45717746-45717765 | Msa1021390:CDS | 30.0% |
| !! | AGAACAGTTGATGAATGAAT+GGG | + | chr7_1:45717747-45717766 | Msa1021390:CDS | 30.0% |
| !!! | ACATAGCTTTTTTTGGATTG+TGG | + | chr7_1:45717857-45717876 | Msa1021390:three_prime_UTR | 30.0% |
| !! | TATTTTCATTTTTGGGGAAG+AGG | + | chr7_1:45717926-45717945 | Msa1021390:three_prime_UTR | 30.0% |
| ! | TGAGTCAATTTACACTTTTG+AGG | - | chr7_1:45718003-45718022 | None:intergenic | 30.0% |
| ! | CAAAAGTGTAAATTGACTCA+TGG | + | chr7_1:45718003-45718022 | Msa1021390:three_prime_UTR | 30.0% |
| GTTTCTTCAACTAGAGGAAT+AGG | - | chr7_1:45713699-45713718 | None:intergenic | 35.0% | |
| !!! | TTTTTGAGGTAAGAACTGGT+TGG | - | chr7_1:45713774-45713793 | None:intergenic | 35.0% |
| !!! | AAGCTTTTTGAGGTAAGAAC+TGG | - | chr7_1:45713778-45713797 | None:intergenic | 35.0% |
| GTACTTTACAAGGTTCCTTA+TGG | + | chr7_1:45713884-45713903 | Msa1021390:CDS | 35.0% | |
| ACATAAGGACTATCACCATA+AGG | - | chr7_1:45713902-45713921 | None:intergenic | 35.0% | |
| ! | CTAATCAAAGTTGGTCTACA+AGG | - | chr7_1:45714096-45714115 | None:intergenic | 35.0% |
| CTTGTAGACCAACTTTGATT+AGG | + | chr7_1:45714094-45714113 | Msa1021390:intron | 35.0% | |
| TCAGATGTAGTATATTTCCG+GGG | + | chr7_1:45714459-45714478 | Msa1021390:intron | 35.0% | |
| ATGGATTCAAGCAATTTGGA+TGG | + | chr7_1:45714735-45714754 | Msa1021390:intron | 35.0% | |
| ATTTGATCAAATTGCAGTCG+AGG | - | chr7_1:45714953-45714972 | None:intergenic | 35.0% | |
| TGGATCCCACTAAATTATGT+AGG | + | chr7_1:45715037-45715056 | Msa1021390:intron | 35.0% | |
| ! | TCTCATTTTACACTCTTCTC+TGG | + | chr7_1:45715216-45715235 | Msa1021390:intron | 35.0% |
| CACTCAGTAAGAAATTTGAG+AGG | - | chr7_1:45715285-45715304 | None:intergenic | 35.0% | |
| AATTATGTAGCTGGTAGAGA+AGG | + | chr7_1:45715347-45715366 | Msa1021390:intron | 35.0% | |
| ATAATACAATTGCAGCTTCC+GGG | - | chr7_1:45715374-45715393 | None:intergenic | 35.0% | |
| !! | TTTTGGAAAGCAATAAACGC+AGG | + | chr7_1:45715393-45715412 | Msa1021390:CDS | 35.0% |
| TTTGGAAAGCAATAAACGCA+GGG | + | chr7_1:45715394-45715413 | Msa1021390:CDS | 35.0% | |
| TACATTATCAAGGGACTCTT+GGG | - | chr7_1:45715532-45715551 | None:intergenic | 35.0% | |
| ! | CATCTTACGCTTGACTTTTA+AGG | - | chr7_1:45715679-45715698 | None:intergenic | 35.0% |
| TTTCTTTGCCCGTTACATAT+CGG | + | chr7_1:45715895-45715914 | Msa1021390:intron | 35.0% | |
| GAAATGTGGGAAAATAGATG+AGG | + | chr7_1:45716125-45716144 | Msa1021390:intron | 35.0% | |
| AAGCTGAAATTGATCTACCA+AGG | + | chr7_1:45716168-45716187 | Msa1021390:CDS | 35.0% | |
| ACAAGAAACTTCGAGATTAC+TGG | + | chr7_1:45716260-45716279 | Msa1021390:CDS | 35.0% | |
| AATAAAGTGATGTGGGACAA+TGG | + | chr7_1:45716416-45716435 | Msa1021390:intron | 35.0% | |
| !!! | TTTGCAAGCTTTTTTAGCAG+TGG | - | chr7_1:45716474-45716493 | None:intergenic | 35.0% |
| TCTGTTGATATAATACAGCC+AGG | + | chr7_1:45716572-45716591 | Msa1021390:intron | 35.0% | |
| TTCCATATGGGTCCATTTAA+AGG | + | chr7_1:45716657-45716676 | Msa1021390:intron | 35.0% | |
| TTTGTAGGTGGACCTTTAAA+TGG | - | chr7_1:45716672-45716691 | None:intergenic | 35.0% | |
| TAAAGGTCCACCTACAAAAA+AGG | + | chr7_1:45716674-45716693 | Msa1021390:intron | 35.0% | |
| ! | AGATAGTGCCCATTTTCTTT+GGG | + | chr7_1:45717006-45717025 | Msa1021390:intron | 35.0% |
| ! | CTTTTCTTGTGTTAACCCTT+CGG | - | chr7_1:45717034-45717053 | None:intergenic | 35.0% |
| ! | GTATCTACACATTTTTGCTC+AGG | + | chr7_1:45717417-45717436 | Msa1021390:intron | 35.0% |
| ! | ATTTTTGCTCAGGGAAACTT+GGG | + | chr7_1:45717427-45717446 | Msa1021390:intron | 35.0% |
| ! | TTACATGCTTTGTTGCAATC+TGG | - | chr7_1:45717523-45717542 | None:intergenic | 35.0% |
| TATGTCTCATTAGACAAGCA+CGG | + | chr7_1:45717551-45717570 | Msa1021390:CDS | 35.0% | |
| ! | ACCATGTCCATTGGATATTT+TGG | + | chr7_1:45717696-45717715 | Msa1021390:CDS | 35.0% |
| ACCAAAATATCCAATGGACA+TGG | - | chr7_1:45717700-45717719 | None:intergenic | 35.0% | |
| ATGGATGATGAGTTCATCAA+AGG | + | chr7_1:45717721-45717740 | Msa1021390:CDS | 35.0% | |
| TGGATGATGAGTTCATCAAA+GGG | + | chr7_1:45717722-45717741 | Msa1021390:CDS | 35.0% | |
| !! | GAACAGTTGATGAATGAATG+GGG | + | chr7_1:45717748-45717767 | Msa1021390:CDS | 35.0% |
| ! | TTTCTTTTCCATAATAGCGG+AGG | + | chr7_1:45717899-45717918 | Msa1021390:three_prime_UTR | 35.0% |
| !! | TTCTTTTCCATAATAGCGGA+GGG | + | chr7_1:45717900-45717919 | Msa1021390:three_prime_UTR | 35.0% |
| AATAAAACCCTCCGCTATTA+TGG | - | chr7_1:45717910-45717929 | None:intergenic | 35.0% | |
| GTGAAATTCACTGCAATTCA+TGG | - | chr7_1:45718054-45718073 | None:intergenic | 35.0% | |
| AGGGATGTAATGAACCTAGA+TGG | - | chr7_1:45713646-45713665 | None:intergenic | 40.0% | |
| CAATTGCAGCCACGATATAA+CGG | + | chr7_1:45714904-45714923 | Msa1021390:intron | 40.0% | |
| AATTGCAGCCACGATATAAC+GGG | + | chr7_1:45714905-45714924 | Msa1021390:intron | 40.0% | |
| ACTACAAACCCGTTATATCG+TGG | - | chr7_1:45714916-45714935 | None:intergenic | 40.0% | |
| !!! | TAACTGCATTTTTTCCTGGG+AGG | + | chr7_1:45714973-45714992 | Msa1021390:intron | 40.0% |
| AGGGGCCTACATAATTTAGT+GGG | - | chr7_1:45715045-45715064 | None:intergenic | 40.0% | |
| GATCCGACTAGATTTATGAG+GGG | - | chr7_1:45715063-45715082 | None:intergenic | 40.0% | |
| GGATCCGACTAGATTTATGA+GGG | - | chr7_1:45715064-45715083 | None:intergenic | 40.0% | |
| TGGATCCGACTAGATTTATG+AGG | - | chr7_1:45715065-45715084 | None:intergenic | 40.0% | |
| TTGGAAAGCAATAAACGCAG+GGG | + | chr7_1:45715395-45715414 | Msa1021390:CDS | 40.0% | |
| CAAAGTGGATAGTGCTTTGA+AGG | + | chr7_1:45715419-45715438 | Msa1021390:CDS | 40.0% | |
| GTCTAATTGCTTCATCACCA+CGG | - | chr7_1:45715451-45715470 | None:intergenic | 40.0% | |
| GTACATTATCAAGGGACTCT+TGG | - | chr7_1:45715533-45715552 | None:intergenic | 40.0% | |
| GAAATTGATCTACCAAGGTG+AGG | + | chr7_1:45716173-45716192 | Msa1021390:CDS | 40.0% | |
| CTTTGTGAGTTTCCCATTGA+AGG | - | chr7_1:45716199-45716218 | None:intergenic | 40.0% | |
| GACCTTTAAATGGACCCATA+TGG | - | chr7_1:45716662-45716681 | None:intergenic | 40.0% | |
| TCCACCTACAAAAAAGGAGA+GGG | + | chr7_1:45716680-45716699 | Msa1021390:intron | 40.0% | |
| !!! | TCTTCCCTCTCCTTTTTTGT+AGG | - | chr7_1:45716687-45716706 | None:intergenic | 40.0% |
| TACAAAAAAGGAGAGGGAAG+AGG | + | chr7_1:45716686-45716705 | Msa1021390:intron | 40.0% | |
| ACAAAAAAGGAGAGGGAAGA+GGG | + | chr7_1:45716687-45716706 | Msa1021390:intron | 40.0% | |
| ACTATCTCCTCTAGTAATCC+GGG | - | chr7_1:45716993-45717012 | None:intergenic | 40.0% | |
| CACTATCTCCTCTAGTAATC+CGG | - | chr7_1:45716994-45717013 | None:intergenic | 40.0% | |
| ! | GAGATAGTGCCCATTTTCTT+TGG | + | chr7_1:45717005-45717024 | Msa1021390:intron | 40.0% |
| CTTCGGTTCCCAAAGAAAAT+GGG | - | chr7_1:45717017-45717036 | None:intergenic | 40.0% | |
| !! | CATTTTCTTTGGGAACCGAA+GGG | + | chr7_1:45717016-45717035 | Msa1021390:intron | 40.0% |
| !! | TTCACAAGACCGACTTGTAA+GGG | - | chr7_1:45717123-45717142 | None:intergenic | 40.0% |
| AGGGTGCAGATACAAATGAT+GGG | - | chr7_1:45717203-45717222 | None:intergenic | 40.0% | |
| TAGGGTGCAGATACAAATGA+TGG | - | chr7_1:45717204-45717223 | None:intergenic | 40.0% | |
| ! | CATTTTTGCTCAGGGAAACT+TGG | + | chr7_1:45717426-45717445 | Msa1021390:intron | 40.0% |
| GCAAAAGATGAACTACGTGA+TGG | + | chr7_1:45717462-45717481 | Msa1021390:CDS | 40.0% | |
| GCAATCTGGATCGATCATTT+GGG | - | chr7_1:45717509-45717528 | None:intergenic | 40.0% | |
| TGCAATCTGGATCGATCATT+TGG | - | chr7_1:45717510-45717529 | None:intergenic | 40.0% | |
| GACTTGATATCATCTGAACC+TGG | - | chr7_1:45717625-45717644 | None:intergenic | 40.0% | |
| ATATCCAATGGACATGGTGT+AGG | - | chr7_1:45717694-45717713 | None:intergenic | 40.0% | |
| GGAAGTCTCTTTGATCTAAC+TGG | - | chr7_1:45717775-45717794 | None:intergenic | 40.0% | |
| !! | GCATGTTTGGCTCTGACATA+AGG | - | chr7_1:45713917-45713936 | None:intergenic | 45.0% |
| ! | ATACCGTCTTCGGTCTTATG+TGG | + | chr7_1:45714183-45714202 | Msa1021390:intron | 45.0% |
| AGACCACATAAGACCGAAGA+CGG | - | chr7_1:45714189-45714208 | None:intergenic | 45.0% | |
| ! | GTGTTGTTATCATTCCTCCC+AGG | - | chr7_1:45714990-45715009 | None:intergenic | 45.0% |
| GAGGGGCCTACATAATTTAG+TGG | - | chr7_1:45715046-45715065 | None:intergenic | 45.0% | |
| AGGCCCCTCATAAATCTAGT+CGG | + | chr7_1:45715057-45715076 | Msa1021390:intron | 45.0% | |
| TTGAAGACGAGGTTACGGTT+AGG | - | chr7_1:45715149-45715168 | None:intergenic | 45.0% | |
| AATAAACGCAGGGGACAAAG+TGG | + | chr7_1:45715404-45715423 | Msa1021390:CDS | 45.0% | |
| !! | GGATAGTGCTTTGAAGGACA+TGG | + | chr7_1:45715425-45715444 | Msa1021390:CDS | 45.0% |
| AAACGAAGAGATGGCTTCGA+TGG | - | chr7_1:45715487-45715506 | None:intergenic | 45.0% | |
| ! | CTTGGGATTGTTTGGAGCAA+AGG | - | chr7_1:45715515-45715534 | None:intergenic | 45.0% |
| AAGGGACTCTTGGGATTGTT+TGG | - | chr7_1:45715523-45715542 | None:intergenic | 45.0% | |
| GGAAACTCACAAAGACTGCA+CGG | + | chr7_1:45716205-45716224 | Msa1021390:CDS | 45.0% | |
| GTCCACCTACAAAAAAGGAG+AGG | + | chr7_1:45716679-45716698 | Msa1021390:intron | 45.0% | |
| !!! | TCCCTCTCCTTTTTTGTAGG+TGG | - | chr7_1:45716684-45716703 | None:intergenic | 45.0% |
| CTATCTCCTCTAGTAATCCG+GGG | - | chr7_1:45716992-45717011 | None:intergenic | 45.0% | |
| CCTTCGGTTCCCAAAGAAAA+TGG | - | chr7_1:45717018-45717037 | None:intergenic | 45.0% | |
| !! | CCATTTTCTTTGGGAACCGA+AGG | + | chr7_1:45717015-45717034 | Msa1021390:intron | 45.0% |
| GAAAGACACCCCTTACAAGT+CGG | + | chr7_1:45717111-45717130 | Msa1021390:intron | 45.0% | |
| !! | TCACAAGACCGACTTGTAAG+GGG | - | chr7_1:45717122-45717141 | None:intergenic | 45.0% |
| !! | CTTCACAAGACCGACTTGTA+AGG | - | chr7_1:45717124-45717143 | None:intergenic | 45.0% |
| TAGACAAGCACGGTATGAAG+AGG | + | chr7_1:45717561-45717580 | Msa1021390:CDS | 45.0% | |
| ! | GGGGAAGAGGTGTATAAGAT+AGG | + | chr7_1:45717939-45717958 | Msa1021390:three_prime_UTR | 45.0% |
| TGTCAGAGCCAAACATGCTC+AGG | + | chr7_1:45713919-45713938 | Msa1021390:CDS | 50.0% | |
| GATGGCTTCGATGGCTTCTT+CGG | - | chr7_1:45715478-45715497 | None:intergenic | 50.0% | |
| GAAGCCATCTCTTCGTTTCG+CGG | + | chr7_1:45715489-45715508 | Msa1021390:CDS | 50.0% | |
| TACCAAGGTGAGGCCTTCAA+TGG | + | chr7_1:45716183-45716202 | Msa1021390:CDS | 50.0% | |
| ACCAAGGTGAGGCCTTCAAT+GGG | + | chr7_1:45716184-45716203 | Msa1021390:CDS | 50.0% | |
| ACAAAGACTGCACGGTCTCA+TGG | + | chr7_1:45716213-45716232 | Msa1021390:CDS | 50.0% | |
| GTTCGGCACTACTGGACTTA+GGG | - | chr7_1:45717222-45717241 | None:intergenic | 50.0% | |
| ! | CTAAGTCCAGTAGTGCCGAA+CGG | + | chr7_1:45717221-45717240 | Msa1021390:intron | 50.0% |
| ! | TAAGTCCAGTAGTGCCGAAC+GGG | + | chr7_1:45717222-45717241 | Msa1021390:intron | 50.0% |
| CCAATAAACCGTCTCCCGTT+CGG | - | chr7_1:45717239-45717258 | None:intergenic | 50.0% | |
| GCTACCTACACCATGTCCAT+TGG | + | chr7_1:45717687-45717706 | Msa1021390:CDS | 50.0% | |
| GTAGCTGGTAGAGAAGGACC+CGG | + | chr7_1:45715353-45715372 | Msa1021390:intron | 55.0% | |
| !! | TGCTTTGAAGGACATGGCCG+TGG | + | chr7_1:45715431-45715450 | Msa1021390:CDS | 55.0% |
| AAGGCCGCGAAACGAAGAGA+TGG | - | chr7_1:45715496-45715515 | None:intergenic | 55.0% | |
| TCCCATTGAAGGCCTCACCT+TGG | - | chr7_1:45716188-45716207 | None:intergenic | 55.0% | |
| TAGTAATCCGGGGTTCGACC+GGG | - | chr7_1:45716982-45717001 | None:intergenic | 55.0% | |
| CTAGTAATCCGGGGTTCGAC+CGG | - | chr7_1:45716983-45717002 | None:intergenic | 55.0% | |
| GTCGAACCCCGGATTACTAG+AGG | + | chr7_1:45716983-45717002 | Msa1021390:intron | 55.0% | |
| CGTTCGGCACTACTGGACTT+AGG | - | chr7_1:45717223-45717242 | None:intergenic | 55.0% | |
| CCGAACGGGAGACGGTTTAT+TGG | + | chr7_1:45717236-45717255 | Msa1021390:intron | 55.0% | |
| TTGCTCAGGGAAACTTGGGC+TGG | + | chr7_1:45717431-45717450 | Msa1021390:intron | 55.0% | |
| TGCTCAGGGAAACTTGGGCT+GGG | + | chr7_1:45717432-45717451 | Msa1021390:intron | 55.0% | |
| GATGAACTACGTGATGGCCG+AGG | + | chr7_1:45717468-45717487 | Msa1021390:CDS | 55.0% | |
| CTTATCTCCCGGTCGAACCC+CGG | + | chr7_1:45716972-45716991 | Msa1021390:intron | 60.0% | |
| ! | CAGTAGTGCCGAACGGGAGA+CGG | + | chr7_1:45717228-45717247 | Msa1021390:intron | 60.0% |
| GAACTACGTGATGGCCGAGG+CGG | + | chr7_1:45717471-45717490 | Msa1021390:CDS | 60.0% | |
| TGATGGCCGAGGCGGTGTAT+CGG | + | chr7_1:45717479-45717498 | Msa1021390:CDS | 60.0% | |
| GGCTTTCCGATACACCGCCT+CGG | - | chr7_1:45717488-45717507 | None:intergenic | 60.0% | |
| CGTCTCCCGTTCGGCACTAC+TGG | - | chr7_1:45717230-45717249 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 45713636 | 45718091 | 45713636 | ID=Msa1021390;Name=Msa1021390 |
| chr7_1 | mRNA | 45713636 | 45718091 | 45713636 | ID=Msa1021390-mRNA-1;Parent=Msa1021390;Name=Msa1021390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=173|1|1|1|1|1|4|251|300 |
| chr7_1 | exon | 45713636 | 45713940 | 45713636 | ID=Msa1021390-mRNA-1:exon:9040;Parent=Msa1021390-mRNA-1 |
| chr7_1 | exon | 45715357 | 45715569 | 45715357 | ID=Msa1021390-mRNA-1:exon:9041;Parent=Msa1021390-mRNA-1 |
| chr7_1 | exon | 45716126 | 45716281 | 45716126 | ID=Msa1021390-mRNA-1:exon:9042;Parent=Msa1021390-mRNA-1 |
| chr7_1 | exon | 45717439 | 45718091 | 45717439 | ID=Msa1021390-mRNA-1:exon:9043;Parent=Msa1021390-mRNA-1 |
| chr7_1 | five_prime_UTR | 45713636 | 45713808 | 45713636 | ID=Msa1021390-mRNA-1:five_prime_utr;Parent=Msa1021390-mRNA-1 |
| chr7_1 | CDS | 45713809 | 45713940 | 45713809 | ID=Msa1021390-mRNA-1:cds;Parent=Msa1021390-mRNA-1 |
| chr7_1 | CDS | 45715357 | 45715569 | 45715357 | ID=Msa1021390-mRNA-1:cds;Parent=Msa1021390-mRNA-1 |
| chr7_1 | CDS | 45716126 | 45716281 | 45716126 | ID=Msa1021390-mRNA-1:cds;Parent=Msa1021390-mRNA-1 |
| chr7_1 | CDS | 45717439 | 45717840 | 45717439 | ID=Msa1021390-mRNA-1:cds;Parent=Msa1021390-mRNA-1 |
| chr7_1 | three_prime_UTR | 45717841 | 45718091 | 45717841 | ID=Msa1021390-mRNA-1:three_prime_utr;Parent=Msa1021390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
