Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023470 | XP_013449064.1 | 73.219 | 407 | 77 | 4 | 1 | 375 | 1 | 407 | 0.0 | 578 |
| Msa1023470 | XP_013449064.1 | 95.455 | 44 | 2 | 0 | 473 | 516 | 431 | 474 | 2.84e-13 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023470 | A0A072U0X9 | 73.219 | 407 | 77 | 4 | 1 | 375 | 1 | 407 | 0.0 | 578 |
| Msa1023470 | A0A072U0X9 | 95.455 | 44 | 2 | 0 | 473 | 516 | 431 | 474 | 1.36e-13 | 84.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0436780 | Msa1023470 | 0.802233 | 6.181689e-49 | -8.615850e-47 |
| Msa1023470 | Msa1410680 | 0.802302 | 5.984154e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023470 | MtrunA17_Chr7g0241251 | 73.219 | 407 | 77 | 4 | 1 | 375 | 1 | 407 | 0.0 | 577 |
| Msa1023470 | MtrunA17_Chr1g0166321 | 58.780 | 410 | 121 | 5 | 8 | 371 | 10 | 417 | 2.28e-156 | 454 |
| Msa1023470 | MtrunA17_Chr7g0241261 | 60.553 | 398 | 128 | 6 | 1 | 375 | 1 | 392 | 4.17e-155 | 449 |
| Msa1023470 | MtrunA17_Chr7g0241421 | 53.864 | 427 | 138 | 10 | 3 | 371 | 5 | 430 | 3.34e-129 | 388 |
| Msa1023470 | MtrunA17_Chr7g0241161 | 54.005 | 387 | 147 | 12 | 6 | 375 | 9 | 381 | 9.75e-120 | 358 |
| Msa1023470 | MtrunA17_Chr7g0241431 | 48.426 | 413 | 149 | 11 | 18 | 375 | 1 | 404 | 1.10e-113 | 344 |
| Msa1023470 | MtrunA17_Chr7g0218371 | 48.931 | 421 | 159 | 11 | 3 | 387 | 5 | 405 | 6.17e-110 | 334 |
| Msa1023470 | MtrunA17_Chr7g0241201 | 50.402 | 373 | 145 | 8 | 8 | 342 | 11 | 381 | 4.48e-108 | 327 |
| Msa1023470 | MtrunA17_Chr7g0237451 | 43.880 | 433 | 166 | 10 | 1 | 370 | 1 | 419 | 6.75e-102 | 314 |
| Msa1023470 | MtrunA17_Chr7g0237451 | 26.147 | 218 | 144 | 8 | 10 | 220 | 244 | 451 | 1.44e-12 | 69.7 |
| Msa1023470 | MtrunA17_Chr7g0241271 | 51.064 | 329 | 120 | 9 | 6 | 297 | 8 | 332 | 4.38e-94 | 289 |
| Msa1023470 | MtrunA17_Chr7g0241231 | 79.861 | 144 | 29 | 0 | 9 | 152 | 4 | 147 | 4.79e-79 | 244 |
| Msa1023470 | MtrunA17_Chr7g0241231 | 35.644 | 101 | 59 | 2 | 230 | 325 | 6 | 105 | 5.09e-11 | 61.2 |
| Msa1023470 | MtrunA17_Chr7g0241211 | 81.944 | 144 | 26 | 0 | 232 | 375 | 1 | 144 | 5.90e-78 | 243 |
| Msa1023470 | MtrunA17_Chr7g0241331 | 37.757 | 437 | 190 | 12 | 12 | 371 | 4 | 435 | 2.09e-77 | 251 |
| Msa1023470 | MtrunA17_Chr7g0241331 | 28.761 | 226 | 124 | 10 | 9 | 213 | 254 | 463 | 1.46e-12 | 69.7 |
| Msa1023470 | MtrunA17_Chr7g0239911 | 38.967 | 426 | 189 | 12 | 12 | 370 | 10 | 431 | 1.21e-76 | 248 |
| Msa1023470 | MtrunA17_Chr7g0239731 | 35.129 | 427 | 208 | 9 | 8 | 373 | 5 | 423 | 5.99e-72 | 236 |
| Msa1023470 | MtrunA17_Chr7g0239731 | 27.979 | 193 | 114 | 5 | 12 | 192 | 250 | 429 | 9.72e-17 | 82.8 |
| Msa1023470 | MtrunA17_Chr7g0239901 | 36.659 | 431 | 205 | 11 | 6 | 371 | 32 | 459 | 4.14e-70 | 233 |
| Msa1023470 | MtrunA17_Chr7g0241291 | 49.612 | 258 | 84 | 3 | 162 | 373 | 11 | 268 | 4.71e-69 | 224 |
| Msa1023470 | MtrunA17_Chr7g0239841 | 34.053 | 417 | 214 | 8 | 13 | 371 | 11 | 424 | 1.81e-67 | 223 |
| Msa1023470 | MtrunA17_Chr7g0239921 | 34.458 | 415 | 212 | 9 | 11 | 371 | 36 | 444 | 7.26e-67 | 224 |
| Msa1023470 | MtrunA17_Chr7g0239921 | 26.066 | 211 | 130 | 6 | 12 | 210 | 281 | 477 | 1.51e-15 | 79.3 |
| Msa1023470 | MtrunA17_Chr7g0238971 | 33.176 | 425 | 228 | 9 | 1 | 371 | 1 | 423 | 1.08e-66 | 223 |
| Msa1023470 | MtrunA17_Chr7g0239831 | 36.321 | 424 | 204 | 12 | 6 | 367 | 4 | 423 | 3.12e-66 | 222 |
| Msa1023470 | MtrunA17_Chr7g0238961 | 33.787 | 441 | 210 | 12 | 9 | 371 | 262 | 698 | 3.19e-64 | 222 |
| Msa1023470 | MtrunA17_Chr7g0238961 | 30.752 | 452 | 222 | 15 | 13 | 379 | 11 | 456 | 7.11e-42 | 159 |
| Msa1023470 | MtrunA17_Chr7g0238961 | 32.227 | 211 | 128 | 8 | 12 | 216 | 529 | 730 | 4.18e-15 | 78.6 |
| Msa1023470 | MtrunA17_Chr7g0239851 | 34.651 | 430 | 213 | 12 | 1 | 371 | 1 | 421 | 2.08e-60 | 206 |
| Msa1023470 | MtrunA17_Chr7g0239851 | 29.630 | 216 | 125 | 10 | 12 | 216 | 254 | 453 | 2.05e-13 | 72.4 |
| Msa1023470 | MtrunA17_Chr7g0241311 | 45.540 | 213 | 102 | 4 | 13 | 215 | 11 | 219 | 1.96e-57 | 191 |
| Msa1023470 | MtrunA17_Chr4g0007631 | 30.216 | 556 | 294 | 17 | 1 | 506 | 1 | 512 | 6.30e-56 | 195 |
| Msa1023470 | MtrunA17_Chr4g0008481 | 28.769 | 577 | 307 | 15 | 1 | 516 | 1 | 534 | 1.25e-55 | 195 |
| Msa1023470 | MtrunA17_Chr7g0241191 | 68.000 | 125 | 38 | 1 | 91 | 213 | 1 | 125 | 9.77e-55 | 181 |
| Msa1023470 | MtrunA17_Chr7g0241171 | 86.869 | 99 | 13 | 0 | 277 | 375 | 3 | 101 | 2.61e-54 | 179 |
| Msa1023470 | MtrunA17_Chr4g0007341 | 36.503 | 326 | 150 | 10 | 15 | 293 | 16 | 331 | 4.10e-54 | 189 |
| Msa1023470 | MtrunA17_Chr2g0291981 | 68.852 | 122 | 37 | 1 | 6 | 127 | 8 | 128 | 1.45e-52 | 175 |
| Msa1023470 | MtrunA17_Chr3g0078631 | 35.411 | 401 | 194 | 13 | 11 | 367 | 21 | 400 | 2.38e-52 | 184 |
| Msa1023470 | MtrunA17_Chr7g0241511 | 36.480 | 392 | 152 | 9 | 162 | 503 | 17 | 361 | 8.27e-52 | 180 |
| Msa1023470 | MtrunA17_Chr7g0241511 | 28.638 | 213 | 136 | 7 | 8 | 213 | 101 | 304 | 1.95e-14 | 74.7 |
| Msa1023470 | MtrunA17_Chr7g0241181 | 73.684 | 114 | 30 | 0 | 220 | 333 | 3 | 116 | 1.13e-51 | 172 |
| Msa1023470 | MtrunA17_Chr4g0008511 | 30.580 | 448 | 223 | 14 | 1 | 370 | 1 | 438 | 1.22e-49 | 177 |
| Msa1023470 | MtrunA17_Chr7g0239891 | 48.744 | 199 | 98 | 4 | 11 | 208 | 10 | 205 | 2.33e-48 | 174 |
| Msa1023470 | MtrunA17_Chr7g0239891 | 29.586 | 169 | 89 | 6 | 231 | 371 | 284 | 450 | 1.33e-11 | 67.0 |
| Msa1023470 | MtrunA17_Chr7g0241351 | 45.714 | 210 | 101 | 5 | 11 | 215 | 15 | 216 | 6.18e-46 | 160 |
| Msa1023470 | MtrunA17_Chr7g0241351 | 31.548 | 168 | 87 | 5 | 230 | 370 | 15 | 181 | 3.67e-12 | 66.2 |
| Msa1023470 | MtrunA17_Chr4g0007271 | 31.978 | 369 | 165 | 7 | 1 | 326 | 1 | 326 | 6.67e-46 | 167 |
| Msa1023470 | MtrunA17_Chr4g0007271 | 27.966 | 236 | 129 | 8 | 5 | 213 | 227 | 448 | 9.07e-17 | 83.2 |
| Msa1023470 | MtrunA17_Chr4g0007251 | 32.973 | 370 | 168 | 10 | 6 | 326 | 2 | 340 | 2.40e-45 | 166 |
| Msa1023470 | MtrunA17_Chr4g0007251 | 31.016 | 187 | 109 | 5 | 5 | 178 | 241 | 420 | 1.38e-15 | 79.3 |
| Msa1023470 | MtrunA17_Chr3g0110221 | 36.449 | 321 | 144 | 10 | 91 | 375 | 1 | 297 | 1.18e-44 | 161 |
| Msa1023470 | MtrunA17_Chr7g0241361 | 43.750 | 208 | 96 | 5 | 12 | 219 | 16 | 202 | 1.33e-40 | 147 |
| Msa1023470 | MtrunA17_Chr4g0007231 | 38.235 | 238 | 113 | 9 | 6 | 220 | 3 | 229 | 1.34e-40 | 146 |
| Msa1023470 | MtrunA17_Chr7g0239861 | 31.742 | 356 | 176 | 14 | 68 | 369 | 4 | 346 | 7.17e-37 | 140 |
| Msa1023470 | MtrunA17_Chr7g0241301 | 51.880 | 133 | 43 | 2 | 1 | 133 | 1 | 112 | 1.94e-36 | 131 |
| Msa1023470 | MtrunA17_Chr7g0239751 | 39.070 | 215 | 106 | 7 | 7 | 213 | 28 | 225 | 7.25e-34 | 128 |
| Msa1023470 | MtrunA17_Chr7g0237481 | 57.143 | 105 | 44 | 1 | 222 | 325 | 4 | 108 | 1.01e-31 | 120 |
| Msa1023470 | MtrunA17_Chr7g0237481 | 39.785 | 93 | 50 | 2 | 4 | 95 | 6 | 93 | 2.30e-13 | 68.6 |
| Msa1023470 | MtrunA17_Chr7g0239761 | 31.673 | 281 | 118 | 9 | 13 | 258 | 30 | 271 | 2.96e-28 | 114 |
| Msa1023470 | MtrunA17_Chr1g0150211 | 56.250 | 96 | 42 | 0 | 232 | 327 | 1 | 96 | 8.50e-28 | 108 |
| Msa1023470 | MtrunA17_Chr1g0150201 | 47.200 | 125 | 62 | 4 | 91 | 213 | 1 | 123 | 5.82e-26 | 103 |
| Msa1023470 | MtrunA17_Chr1g0212741 | 34.259 | 216 | 121 | 6 | 11 | 213 | 10 | 217 | 1.56e-24 | 102 |
| Msa1023470 | MtrunA17_Chr8g0355351 | 31.280 | 211 | 129 | 5 | 12 | 213 | 13 | 216 | 2.86e-22 | 95.9 |
| Msa1023470 | MtrunA17_Chr7g0237471 | 40.984 | 122 | 65 | 3 | 101 | 216 | 3 | 123 | 6.37e-21 | 89.0 |
| Msa1023470 | MtrunA17_Chr4g0007321 | 31.646 | 237 | 115 | 10 | 5 | 217 | 54 | 267 | 6.05e-20 | 90.1 |
| Msa1023470 | MtrunA17_Chr4g0007321 | 39.583 | 96 | 49 | 1 | 230 | 325 | 60 | 146 | 1.28e-13 | 71.6 |
| Msa1023470 | MtrunA17_Chr7g0239791 | 33.784 | 148 | 85 | 3 | 231 | 365 | 68 | 215 | 1.21e-19 | 89.4 |
| Msa1023470 | MtrunA17_Chr7g0239791 | 28.780 | 205 | 123 | 8 | 14 | 216 | 70 | 253 | 2.91e-16 | 79.3 |
| Msa1023470 | MtrunA17_Chr7g0241281 | 45.192 | 104 | 29 | 1 | 272 | 375 | 1 | 76 | 4.89e-19 | 82.4 |
| Msa1023470 | MtrunA17_Chr7g0229201 | 30.263 | 228 | 124 | 8 | 6 | 213 | 4 | 216 | 5.18e-18 | 83.6 |
| Msa1023470 | MtrunA17_Chr0c02g0489781 | 30.263 | 228 | 124 | 8 | 6 | 213 | 4 | 216 | 5.18e-18 | 83.6 |
| Msa1023470 | MtrunA17_Chr2g0292001 | 40.876 | 137 | 48 | 3 | 272 | 375 | 1 | 137 | 9.46e-18 | 82.0 |
| Msa1023470 | MtrunA17_Chr1g0212761 | 46.429 | 84 | 40 | 1 | 12 | 95 | 7 | 85 | 1.83e-17 | 79.3 |
| Msa1023470 | MtrunA17_Chr7g0241501 | 75.000 | 48 | 12 | 0 | 18 | 65 | 1 | 48 | 2.79e-17 | 75.9 |
| Msa1023470 | MtrunA17_Chr1g0212771 | 31.818 | 198 | 98 | 8 | 12 | 180 | 9 | 198 | 5.64e-17 | 79.7 |
| Msa1023470 | MtrunA17_Chr7g0241221 | 67.308 | 52 | 17 | 0 | 168 | 219 | 2 | 53 | 1.73e-14 | 68.9 |
| Msa1023470 | MtrunA17_Chr7g0239741 | 31.293 | 147 | 93 | 3 | 232 | 370 | 25 | 171 | 2.97e-14 | 72.4 |
| Msa1023470 | MtrunA17_Chr7g0229211 | 42.353 | 85 | 43 | 2 | 12 | 95 | 8 | 87 | 9.00e-14 | 71.6 |
| Msa1023470 | MtrunA17_Chr7g0263461 | 57.143 | 56 | 17 | 1 | 6 | 54 | 26 | 81 | 9.89e-14 | 67.0 |
| Msa1023470 | MtrunA17_Chr8g0355371 | 41.758 | 91 | 47 | 2 | 12 | 101 | 8 | 93 | 2.02e-13 | 70.5 |
| Msa1023470 | MtrunA17_Chr0c02g0489791 | 41.176 | 85 | 44 | 2 | 12 | 95 | 8 | 87 | 5.48e-13 | 69.3 |
| Msa1023470 | MtrunA17_Chr2g0291991 | 38.655 | 119 | 42 | 3 | 179 | 266 | 1 | 119 | 1.64e-12 | 64.3 |
| Msa1023470 | MtrunA17_Chr1g0212781 | 40.230 | 87 | 47 | 1 | 12 | 98 | 6 | 87 | 3.40e-12 | 68.6 |
| Msa1023470 | MtrunA17_Chr4g0007221 | 50.000 | 56 | 28 | 0 | 234 | 289 | 12 | 67 | 1.79e-11 | 64.3 |
| Msa1023470 | MtrunA17_Chr4g0008491 | 24.324 | 259 | 134 | 7 | 88 | 318 | 5 | 229 | 2.61e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023470 | AT3G09110.1 | 32.698 | 315 | 181 | 5 | 12 | 296 | 9 | 322 | 1.16e-47 | 169 |
| Msa1023470 | AT5G01120.1 | 28.704 | 432 | 231 | 13 | 13 | 370 | 10 | 438 | 4.11e-43 | 160 |
| Msa1023470 | AT3G09140.2 | 29.888 | 445 | 227 | 12 | 1 | 367 | 1 | 438 | 2.31e-42 | 158 |
| Msa1023470 | AT5G43240.1 | 28.409 | 440 | 226 | 12 | 13 | 370 | 10 | 442 | 6.88e-42 | 157 |
| Msa1023470 | AT5G43240.3 | 28.409 | 440 | 226 | 12 | 13 | 370 | 10 | 442 | 6.88e-42 | 157 |
| Msa1023470 | AT5G43240.4 | 28.409 | 440 | 226 | 12 | 13 | 370 | 10 | 442 | 6.88e-42 | 157 |
| Msa1023470 | AT3G09120.1 | 31.132 | 318 | 171 | 9 | 9 | 285 | 3 | 313 | 2.60e-40 | 148 |
| Msa1023470 | AT5G01130.1 | 29.833 | 419 | 219 | 12 | 1 | 370 | 1 | 393 | 5.89e-40 | 150 |
| Msa1023470 | AT5G01150.1 | 28.671 | 429 | 227 | 11 | 12 | 370 | 9 | 428 | 1.77e-39 | 150 |
| Msa1023470 | AT5G01140.1 | 29.612 | 412 | 211 | 11 | 12 | 367 | 9 | 397 | 2.03e-38 | 147 |
| Msa1023470 | AT3G09140.1 | 37.037 | 216 | 107 | 6 | 1 | 194 | 1 | 209 | 3.88e-30 | 124 |
| Msa1023470 | AT5G37320.1 | 26.056 | 426 | 240 | 15 | 13 | 370 | 10 | 428 | 1.08e-26 | 113 |
Find 90 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTTCTTTACTCAAATTC+TGG | 0.177085 | 7_1:+51375642 | None:intergenic |
| GATCCTAAATCCCCTATTTC+TGG | 0.192592 | 7_1:-51374902 | Msa1023470:CDS |
| GCTTCTTAACATTGCCTTTA+GGG | 0.201640 | 7_1:-51375982 | Msa1023470:CDS |
| TCTATACCTTTGGCTTCTTC+AGG | 0.202952 | 7_1:+51369726 | None:intergenic |
| TGGAGCACCATTAACGTTTA+TGG | 0.217850 | 7_1:-51374870 | Msa1023470:CDS |
| AAAGAACTTGATGGTAGTTT+TGG | 0.219738 | 7_1:-51372320 | Msa1023470:CDS |
| CCAGCATATCCACCAGAAAT+AGG | 0.239307 | 7_1:+51374890 | None:intergenic |
| TGCCATTGACTCCATGCTTC+TGG | 0.253037 | 7_1:+51375534 | None:intergenic |
| CCACCAGAAATAGGGGATTT+AGG | 0.261981 | 7_1:+51374899 | None:intergenic |
| CAAAGTTAGCATTAGAGTTT+TGG | 0.286575 | 7_1:-51376071 | Msa1023470:CDS |
| AGCTTCTTAACATTGCCTTT+AGG | 0.310196 | 7_1:-51375983 | Msa1023470:CDS |
| CGGCATGCAAAATTGAAAAT+AGG | 0.311961 | 7_1:-51375730 | Msa1023470:CDS |
| CTAACTTTGTCACCTTGTTT+TGG | 0.321905 | 7_1:+51376085 | None:intergenic |
| CAATGTTTAATTTCATATTC+CGG | 0.328830 | 7_1:+51375795 | None:intergenic |
| GCAGATCTTGAGCACCTAAA+AGG | 0.333540 | 7_1:+51372771 | None:intergenic |
| AATGTTGAAGCAGTAAAATT+TGG | 0.349258 | 7_1:-51375929 | Msa1023470:CDS |
| CAGCATATCCACCAGAAATA+GGG | 0.355977 | 7_1:+51374891 | None:intergenic |
| GATACCTACAGAAAATTATA+AGG | 0.356507 | 7_1:-51374951 | Msa1023470:CDS |
| CTGTAGGTATCGGTAATATC+TGG | 0.356911 | 7_1:+51374963 | None:intergenic |
| AAACTTGTCATAACCGCATT+TGG | 0.359305 | 7_1:+51375566 | None:intergenic |
| CTATACCTTTGGCTTCTTCA+GGG | 0.361872 | 7_1:+51369727 | None:intergenic |
| TCAAATTCTGGAACGTTTCT+CGG | 0.372872 | 7_1:+51375654 | None:intergenic |
| AACGGCCTCAACCAGTTCAT+TGG | 0.391379 | 7_1:-51370485 | Msa1023470:intron |
| CCTATTTCTGGTGGATATGC+TGG | 0.397124 | 7_1:-51374890 | Msa1023470:CDS |
| TCTGTCACCATAAACGTTAA+TGG | 0.410819 | 7_1:+51374863 | None:intergenic |
| ATTTCATCATTGAAACCTAT+AGG | 0.411287 | 7_1:-51372386 | Msa1023470:CDS |
| GAGTTCAGATTGAGCGGAAA+TGG | 0.418322 | 7_1:+51374991 | None:intergenic |
| ATCTTGATCAACAGTATCTA+TGG | 0.419203 | 7_1:-51375874 | Msa1023470:CDS |
| AACTGATTGGAGGTTGGGAT+TGG | 0.424006 | 7_1:-51375277 | Msa1023470:intron |
| AAGTCCTCAAAAGAACTTGA+TGG | 0.426878 | 7_1:-51372329 | Msa1023470:CDS |
| AAGATATGAAATACCGTCAA+TGG | 0.431308 | 7_1:+51374814 | None:intergenic |
| TACTATACTAACCAATGAAC+TGG | 0.434085 | 7_1:+51370474 | None:intergenic |
| AAAGGAAGAATCTAATGAAA+TGG | 0.437473 | 7_1:-51375248 | Msa1023470:CDS |
| CTCCAGAAGCATGGAGTCAA+TGG | 0.448511 | 7_1:-51375536 | Msa1023470:CDS |
| AATATGCAACACTGCTCCTA+AGG | 0.452936 | 7_1:+51375129 | None:intergenic |
| TCTGTTTGCTGAGGCAGATA+AGG | 0.456755 | 7_1:-51376026 | Msa1023470:CDS |
| ATCATCTATGATAGCAAAGA+TGG | 0.460411 | 7_1:-51372293 | Msa1023470:CDS |
| TTCTAGGGTATTGCGGCTGA+TGG | 0.466717 | 7_1:-51372085 | Msa1023470:CDS |
| TCAAAATCTGCCTTGACAAA+CGG | 0.470384 | 7_1:-51370503 | Msa1023470:CDS |
| ATGTTTGAACAGGATGGTAA+TGG | 0.479119 | 7_1:-51372121 | Msa1023470:intron |
| TTGGAGGTTGGGATTGGTAG+AGG | 0.484357 | 7_1:-51375271 | Msa1023470:intron |
| TACTCAATCCTATAAACTCA+TGG | 0.488738 | 7_1:-51375829 | Msa1023470:CDS |
| ACACACTCACACACAAACTA+AGG | 0.501714 | 7_1:+51375459 | None:intergenic |
| CAGCCGCAATACCCTAGAAA+AGG | 0.517500 | 7_1:+51372089 | None:intergenic |
| CAGGATGGTAATGGACAGAT+TGG | 0.518181 | 7_1:-51372112 | Msa1023470:CDS |
| TCATTTGCACCATTCCCTAC+TGG | 0.523296 | 7_1:-51372010 | Msa1023470:intron |
| TATACCTTTGGCTTCTTCAG+GGG | 0.525240 | 7_1:+51369728 | None:intergenic |
| ATACCTTTGGCTTCTTCAGG+GGG | 0.533673 | 7_1:+51369729 | None:intergenic |
| CTGGTTGAGGCCGTTTGTCA+AGG | 0.537345 | 7_1:+51370493 | None:intergenic |
| CCTATAGGACACTTCGTGAC+GGG | 0.543807 | 7_1:-51372371 | Msa1023470:CDS |
| ACAGAGGTAGTAGGACTGGA+AGG | 0.548379 | 7_1:+51375760 | None:intergenic |
| AATGATGAAATCAGCCTCAT+CGG | 0.550324 | 7_1:+51372398 | None:intergenic |
| ACTCAATCCTATAAACTCAT+GGG | 0.552160 | 7_1:-51375828 | Msa1023470:CDS |
| TCTCACAGAGGTAGTAGGAC+TGG | 0.553733 | 7_1:+51375756 | None:intergenic |
| ATATGCAACACTGCTCCTAA+GGG | 0.554427 | 7_1:+51375130 | None:intergenic |
| AGCTTACAAAAGAGAACCGT+TGG | 0.559569 | 7_1:+51375104 | None:intergenic |
| AGCATATCCACCAGAAATAG+GGG | 0.561344 | 7_1:+51374892 | None:intergenic |
| TTAAATCTCCTCCAGAAGCA+TGG | 0.561651 | 7_1:-51375545 | Msa1023470:CDS |
| ACTAACCAATGAACTGGTTG+AGG | 0.567961 | 7_1:+51370480 | None:intergenic |
| CAGAATTTGAGTAAAGAAGT+CGG | 0.574303 | 7_1:-51375641 | Msa1023470:CDS |
| CCTAAATCCCCTATTTCTGG+TGG | 0.575624 | 7_1:-51374899 | Msa1023470:CDS |
| GGTTGGGATTGGTAGAGGAA+AGG | 0.578117 | 7_1:-51375266 | Msa1023470:CDS |
| AGTCTTGCAATAGTCCCTAA+AGG | 0.578435 | 7_1:+51375968 | None:intergenic |
| CCCGTCACGAAGTGTCCTAT+AGG | 0.580159 | 7_1:+51372371 | None:intergenic |
| CGTGTTCTCACAGAGGTAGT+AGG | 0.590180 | 7_1:+51375751 | None:intergenic |
| ATGAATATACCAGTAGGGAA+TGG | 0.595726 | 7_1:+51372001 | None:intergenic |
| GGGAAATGAATATACCAGTA+GGG | 0.597609 | 7_1:+51371996 | None:intergenic |
| ACTCCAATGTCATCCATTGA+CGG | 0.602769 | 7_1:-51374827 | Msa1023470:intron |
| CAGTGTTGCATATTCTCCAA+CGG | 0.603523 | 7_1:-51375120 | Msa1023470:CDS |
| GAAAATCCCTCACCAAAACA+AGG | 0.603627 | 7_1:-51376097 | Msa1023470:CDS |
| ATACCGTCAATGGATGACAT+TGG | 0.606080 | 7_1:+51374824 | None:intergenic |
| CATTGACTCCATGCTTCTGG+AGG | 0.609983 | 7_1:+51375537 | None:intergenic |
| TTTCCGCTCAATCTGAACTC+AGG | 0.610861 | 7_1:-51374988 | Msa1023470:CDS |
| ACCTATAGGACACTTCGTGA+CGG | 0.611426 | 7_1:-51372372 | Msa1023470:CDS |
| GTTTATGGTGACAGATGACT+TGG | 0.612440 | 7_1:-51374855 | Msa1023470:CDS |
| CTACTACCTCTGTGAGAACA+CGG | 0.613030 | 7_1:-51375750 | Msa1023470:CDS |
| AAACAAAGTTCTGTTTGCTG+AGG | 0.615217 | 7_1:-51376035 | Msa1023470:CDS |
| CTCAATCCTATAAACTCATG+GGG | 0.615712 | 7_1:-51375827 | Msa1023470:CDS |
| CAGAGGTAGTAGGACTGGAA+GGG | 0.616285 | 7_1:+51375761 | None:intergenic |
| TCAGATTGAGCGGAAATGGT+AGG | 0.616944 | 7_1:+51374995 | None:intergenic |
| GTTCCTGAGTTCAGATTGAG+CGG | 0.623935 | 7_1:+51374985 | None:intergenic |
| GCACCTAAAAGGAAAAGTGT+TGG | 0.636561 | 7_1:+51372782 | None:intergenic |
| AGGGACTATTGCAAGACTCG+TGG | 0.639762 | 7_1:-51375963 | Msa1023470:CDS |
| CAATCCTATAAACTCATGGG+GGG | 0.660598 | 7_1:-51375825 | Msa1023470:CDS |
| TCAATCCTATAAACTCATGG+GGG | 0.663846 | 7_1:-51375826 | Msa1023470:CDS |
| TCTATGGTCAGACACATGCA+AGG | 0.670514 | 7_1:-51375858 | Msa1023470:CDS |
| TATGCAACACTGCTCCTAAG+GGG | 0.682165 | 7_1:+51375131 | None:intergenic |
| GCTATAACAGGGAACCGATG+AGG | 0.688868 | 7_1:-51372412 | Msa1023470:intron |
| TGCATGCCGTGTTCTCACAG+AGG | 0.701708 | 7_1:+51375744 | None:intergenic |
| TCTTTCTGTGATGCCAAATG+CGG | 0.708786 | 7_1:-51375579 | Msa1023470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTAATATTGTAAAAATA+GGG | - | chr7_1:51372785-51372804 | Msa1023470:intron | 10.0% |
| !! | TATATGAAAAATGAAATTAA+GGG | + | chr7_1:51372897-51372916 | None:intergenic | 10.0% |
| !! | TTATATGAAAAATGAAATTA+AGG | + | chr7_1:51372898-51372917 | None:intergenic | 10.0% |
| !! | AAATGATATAATATCAATAT+TGG | + | chr7_1:51374209-51374228 | None:intergenic | 10.0% |
| !! | ATTATTATCAAAACAAATTA+TGG | + | chr7_1:51374696-51374715 | None:intergenic | 10.0% |
| !!! | TTTTAATATAACAATTAAGA+AGG | - | chr7_1:51375718-51375737 | Msa1023470:CDS | 10.0% |
| !!! | TTGCTTTTTAAATATAAAGT+CGG | + | chr7_1:51370506-51370525 | None:intergenic | 15.0% |
| !!! | GTAGCTTTTTATATTTTTTT+CGG | - | chr7_1:51371691-51371710 | Msa1023470:intron | 15.0% |
| !!! | TTTTGGCTATATATAAAAAA+TGG | - | chr7_1:51371927-51371946 | Msa1023470:intron | 15.0% |
| !!! | GTGTTAATTTGTATAAATTT+AGG | - | chr7_1:51372011-51372030 | Msa1023470:CDS | 15.0% |
| !! | TTAGACTATATTAATCTTAA+AGG | - | chr7_1:51372046-51372065 | Msa1023470:CDS | 15.0% |
| !! | GATACTAATATTGTAAAAAT+AGG | - | chr7_1:51372784-51372803 | Msa1023470:intron | 15.0% |
| !! | TACTAATATTGTAAAAATAG+GGG | - | chr7_1:51372786-51372805 | Msa1023470:CDS | 15.0% |
| !! | TTTCATATAATTGAATTTCA+TGG | - | chr7_1:51372908-51372927 | Msa1023470:intron | 15.0% |
| !! | TTAAGAAATTTAAGAATACA+AGG | + | chr7_1:51373359-51373378 | None:intergenic | 15.0% |
| !! | ATTCTTTATAATTTACTACA+TGG | - | chr7_1:51373621-51373640 | Msa1023470:intron | 15.0% |
| !!! | TGATATTATATCATTTTCAT+TGG | - | chr7_1:51374213-51374232 | Msa1023470:intron | 15.0% |
| !!! | GAAAATTCTAGAAAAATAAA+AGG | + | chr7_1:51374490-51374509 | None:intergenic | 15.0% |
| !!! | GAGTATTATAATTTTAATGT+AGG | + | chr7_1:51375403-51375422 | None:intergenic | 15.0% |
| !! | TAAAGATAATATACAAACAA+GGG | + | chr7_1:51375589-51375608 | None:intergenic | 15.0% |
| !!! | AGTAATTTAAAATGAACAAA+AGG | - | chr7_1:51375923-51375942 | Msa1023470:CDS | 15.0% |
| !!! | CAATGTTTAATTTCATATTC+CGG | + | chr7_1:51370038-51370057 | None:intergenic | 20.0% |
| !! | AAGAATCAAAAATGTATTTG+TGG | - | chr7_1:51370141-51370160 | Msa1023470:intron | 20.0% |
| !!! | AAATTCAACTTTTATCGTAT+CGG | - | chr7_1:51370224-51370243 | Msa1023470:intron | 20.0% |
| !!! | TTATAATTTTCTGTAGGTAT+CGG | + | chr7_1:51370880-51370899 | None:intergenic | 20.0% |
| !!! | TTTTCCTTATAATTTTCTGT+AGG | + | chr7_1:51370886-51370905 | None:intergenic | 20.0% |
| !! | AAAAATTGAATTTAGAGAAG+AGG | + | chr7_1:51371671-51371690 | None:intergenic | 20.0% |
| !!! | TTGATTTTCAAGCATAAATT+AGG | + | chr7_1:51371834-51371853 | None:intergenic | 20.0% |
| !! | GTAAGTATATAAGACTTATT+TGG | - | chr7_1:51371987-51372006 | Msa1023470:intron | 20.0% |
| !!! | GATGATTGTTTTAATCTTAA+AGG | - | chr7_1:51372096-51372115 | Msa1023470:CDS | 20.0% |
| !! | ATGATCAAAATAAAGTTGTT+TGG | + | chr7_1:51372590-51372609 | None:intergenic | 20.0% |
| !!! | AACTTTATTTTGATCATACA+AGG | - | chr7_1:51372593-51372612 | Msa1023470:intron | 20.0% |
| !! | ATTTCCTTTATTGATATTGT+TGG | - | chr7_1:51373154-51373173 | Msa1023470:intron | 20.0% |
| !! | TAATTAAAGTGATTGAAAGA+GGG | + | chr7_1:51373587-51373606 | None:intergenic | 20.0% |
| !! | ATAATTAAAGTGATTGAAAG+AGG | + | chr7_1:51373588-51373607 | None:intergenic | 20.0% |
| !!! | GATTTAAACTCATTTTGAAA+GGG | + | chr7_1:51373857-51373876 | None:intergenic | 20.0% |
| !!! | AGATTTAAACTCATTTTGAA+AGG | + | chr7_1:51373858-51373877 | None:intergenic | 20.0% |
| !!! | TATATTTTAGCTTGTAATGT+TGG | - | chr7_1:51374081-51374100 | Msa1023470:intron | 20.0% |
| !!! | TGATATATTTTAGCTAGATT+TGG | - | chr7_1:51374112-51374131 | Msa1023470:intron | 20.0% |
| !!! | TTTTTTATTGCATCTAATGT+TGG | - | chr7_1:51374339-51374358 | Msa1023470:intron | 20.0% |
| !! | TTATAAGATAGCAACATTAA+GGG | + | chr7_1:51374641-51374660 | None:intergenic | 20.0% |
| !! | TTTATAAGATAGCAACATTA+AGG | + | chr7_1:51374642-51374661 | None:intergenic | 20.0% |
| !! | TCAAAACAAATTATGGATAA+TGG | + | chr7_1:51374689-51374708 | None:intergenic | 20.0% |
| !! | CTAAAGATAATATACAAACA+AGG | + | chr7_1:51375590-51375609 | None:intergenic | 20.0% |
| !! | CTTGTTTGTATATTATCTTT+AGG | - | chr7_1:51375588-51375607 | Msa1023470:CDS | 20.0% |
| !!! | GTACTACTTGTTATATTAAA+TGG | + | chr7_1:51375813-51375832 | None:intergenic | 20.0% |
| !! | TGTACATGAACATATAATAA+AGG | + | chr7_1:51376035-51376054 | None:intergenic | 20.0% |
| ! | AATGTTGAAGCAGTAAAATT+TGG | - | chr7_1:51369901-51369920 | Msa1023470:intron | 25.0% |
| ! | AGTTAATATCAGCAAAAAAG+AGG | - | chr7_1:51370341-51370360 | Msa1023470:intron | 25.0% |
| ! | AAAGGAAGAATCTAATGAAA+TGG | - | chr7_1:51370582-51370601 | Msa1023470:intron | 25.0% |
| ! | GATACCTACAGAAAATTATA+AGG | - | chr7_1:51370879-51370898 | Msa1023470:intron | 25.0% |
| ! | TTCATATCTTGAAAGAATGA+AGG | - | chr7_1:51371029-51371048 | Msa1023470:intron | 25.0% |
| !!! | AAATTAGGTGGTTTTTAAAG+AGG | + | chr7_1:51371394-51371413 | None:intergenic | 25.0% |
| ! | CAATCTTGAAAAAAATTAGG+TGG | + | chr7_1:51371406-51371425 | None:intergenic | 25.0% |
| ! | CAGCAATCTTGAAAAAAATT+AGG | + | chr7_1:51371409-51371428 | None:intergenic | 25.0% |
| ! | ATTGGATTCTAATAACAACT+TGG | + | chr7_1:51371806-51371825 | None:intergenic | 25.0% |
| ! | AGCATAAATTAGGACTAAAT+TGG | + | chr7_1:51371824-51371843 | None:intergenic | 25.0% |
| ! | TGCTTGAAAATCAATGTTTA+TGG | - | chr7_1:51371840-51371859 | Msa1023470:intron | 25.0% |
| ! | GCTTGAAAATCAATGTTTAT+GGG | - | chr7_1:51371841-51371860 | Msa1023470:intron | 25.0% |
| !!! | ATATTGATGAGGTTTAGTTT+TGG | - | chr7_1:51371910-51371929 | Msa1023470:intron | 25.0% |
| ! | AATCTTAAAGGAATTTCACA+TGG | - | chr7_1:51372108-51372127 | Msa1023470:CDS | 25.0% |
| !!! | TCTTTTAACTTGGTTTTGTT+TGG | - | chr7_1:51372298-51372317 | Msa1023470:CDS | 25.0% |
| !! | TTGATTGAATTTGAAGTGTT+TGG | - | chr7_1:51372394-51372413 | Msa1023470:CDS | 25.0% |
| !! | GAAGTGTTTGGTAAAATTAA+CGG | - | chr7_1:51372406-51372425 | Msa1023470:intron | 25.0% |
| !! | TATTGGTAATATAGTATGAC+AGG | + | chr7_1:51372718-51372737 | None:intergenic | 25.0% |
| ! | ACTCTAATCTGAATTCATAT+TGG | + | chr7_1:51372735-51372754 | None:intergenic | 25.0% |
| ! | TTGTGGTAGAAATTACTTAA+TGG | - | chr7_1:51372760-51372779 | Msa1023470:intron | 25.0% |
| ! | ATTGTAAAAATAGGGGATAA+AGG | - | chr7_1:51372793-51372812 | Msa1023470:CDS | 25.0% |
| !! | ACATCTTAGTAGAGTATTAA+CGG | + | chr7_1:51372822-51372841 | None:intergenic | 25.0% |
| ! | TAATTGAATTTCATGGTGAT+AGG | - | chr7_1:51372915-51372934 | Msa1023470:intron | 25.0% |
| ! | TTGTCCAACAATATCAATAA+AGG | + | chr7_1:51373161-51373180 | None:intergenic | 25.0% |
| ! | ATTAAAGGAAATGAAACTCA+TGG | + | chr7_1:51373217-51373236 | None:intergenic | 25.0% |
| ! | CATGAGTTTGTATCAATTAA+AGG | + | chr7_1:51373232-51373251 | None:intergenic | 25.0% |
| ! | ATTTCATCATTGAAACCTAT+AGG | - | chr7_1:51373444-51373463 | Msa1023470:intron | 25.0% |
| ! | AATTAAAGTGATTGAAAGAG+GGG | + | chr7_1:51373586-51373605 | None:intergenic | 25.0% |
| !!! | TGTTGTTTTTTCTGAGAATT+TGG | - | chr7_1:51373771-51373790 | Msa1023470:intron | 25.0% |
| !!! | GTTTAAGCTTTGTTCAAAAA+TGG | - | chr7_1:51374178-51374197 | Msa1023470:intron | 25.0% |
| ! | TAATAGTTAATTGCTGAATC+TGG | - | chr7_1:51374248-51374267 | Msa1023470:intron | 25.0% |
| ! | AATAGTTAATTGCTGAATCT+GGG | - | chr7_1:51374249-51374268 | Msa1023470:intron | 25.0% |
| ! | TATAGAATGATTACAATCAC+AGG | + | chr7_1:51374615-51374634 | None:intergenic | 25.0% |
| ! | TATAAGATAGCAACATTAAG+GGG | + | chr7_1:51374640-51374659 | None:intergenic | 25.0% |
| !! | TATATTGTTTTCATTTTGCC+AGG | - | chr7_1:51374891-51374910 | Msa1023470:CDS | 25.0% |
| !! | ATATTGTTTTCATTTTGCCA+GGG | - | chr7_1:51374892-51374911 | Msa1023470:CDS | 25.0% |
| ! | GATTTCTTGTAGTATAAGAT+TGG | - | chr7_1:51375176-51375195 | Msa1023470:CDS | 25.0% |
| !!! | TATAATTTTAATGTAGGACG+AGG | + | chr7_1:51375397-51375416 | None:intergenic | 25.0% |
| ! | CTACAAATTCCTTCAAAATT+TGG | + | chr7_1:51375514-51375533 | None:intergenic | 25.0% |
| ! | ATTTGTAGAGTGATTGAAAA+TGG | - | chr7_1:51375526-51375545 | Msa1023470:CDS | 25.0% |
| !!! | ATATTATCTTTAGGATTGAC+TGG | - | chr7_1:51375597-51375616 | Msa1023470:CDS | 25.0% |
| ! | AAAACGTGTTAGTGAATTAA+TGG | + | chr7_1:51375701-51375720 | None:intergenic | 25.0% |
| !! | AGTAGTACTAATTTTCCATA+AGG | - | chr7_1:51375825-51375844 | Msa1023470:CDS | 25.0% |
| ! | ATATACATACAGTTACCTTA+TGG | + | chr7_1:51375843-51375862 | None:intergenic | 25.0% |
| ! | TAAGGTAACTGTATGTATAT+TGG | - | chr7_1:51375843-51375862 | Msa1023470:CDS | 25.0% |
| ! | CAAAGTTAGCATTAGAGTTT+TGG | - | chr7_1:51369759-51369778 | Msa1023470:CDS | 30.0% |
| ATCTTGATCAACAGTATCTA+TGG | - | chr7_1:51369956-51369975 | Msa1023470:intron | 30.0% | |
| TACTCAATCCTATAAACTCA+TGG | - | chr7_1:51370001-51370020 | Msa1023470:intron | 30.0% | |
| ACTCAATCCTATAAACTCAT+GGG | - | chr7_1:51370002-51370021 | Msa1023470:intron | 30.0% | |
| CAGAATTTGAGTAAAGAAGT+CGG | - | chr7_1:51370189-51370208 | Msa1023470:intron | 30.0% | |
| !!! | TAAAGAAGTCGGTTTTGTTA+AGG | - | chr7_1:51370200-51370219 | Msa1023470:intron | 30.0% |
| TGATCTTCTCAAATTGTCAT+TGG | - | chr7_1:51370462-51370481 | Msa1023470:intron | 30.0% | |
| TTAAATATAAAGTCGGACAG+AGG | + | chr7_1:51370499-51370518 | None:intergenic | 30.0% | |
| ! | TGAGTTCAGACAAGTATTTT+AGG | - | chr7_1:51370782-51370801 | Msa1023470:intron | 30.0% |
| AAGATATGAAATACCGTCAA+TGG | + | chr7_1:51371019-51371038 | None:intergenic | 30.0% | |
| TTTAAGTAGCTATGTATGCA+GGG | + | chr7_1:51371191-51371210 | None:intergenic | 30.0% | |
| !! | TTTTAAGTAGCTATGTATGC+AGG | + | chr7_1:51371192-51371211 | None:intergenic | 30.0% |
| ATTTCTCAAGTGAGAGAAAA+TGG | + | chr7_1:51371227-51371246 | None:intergenic | 30.0% | |
| !! | GGGTTTTGATAAGAAATCTA+TGG | + | chr7_1:51371521-51371540 | None:intergenic | 30.0% |
| AAGAGAAGAAAAGATATGGA+TGG | + | chr7_1:51371629-51371648 | None:intergenic | 30.0% | |
| ! | TCCATATCTTTTCTTCTCTT+TGG | - | chr7_1:51371629-51371648 | Msa1023470:intron | 30.0% |
| ACCAAAGAGAAGAAAAGATA+TGG | + | chr7_1:51371633-51371652 | None:intergenic | 30.0% | |
| TTTAGAGAAGAGGTAAAAGA+TGG | + | chr7_1:51371661-51371680 | None:intergenic | 30.0% | |
| !! | TGATTTTTAAGCTTCCTAGT+AGG | - | chr7_1:51371760-51371779 | Msa1023470:intron | 30.0% |
| !! | GATTTTTAAGCTTCCTAGTA+GGG | - | chr7_1:51371761-51371780 | Msa1023470:intron | 30.0% |
| TTGGTATCATATATCCACTT+AGG | + | chr7_1:51371787-51371806 | None:intergenic | 30.0% | |
| CTTAAAGGAAATGAAACACA+TGG | - | chr7_1:51372061-51372080 | Msa1023470:CDS | 30.0% | |
| ! | TTTTTGACCACTCATTTGAT+TGG | - | chr7_1:51372135-51372154 | Msa1023470:intron | 30.0% |
| TGTCAGAAAGAAATAAGTCA+CGG | + | chr7_1:51372183-51372202 | None:intergenic | 30.0% | |
| !! | GTCAAGAATCTCTTTTAACT+TGG | - | chr7_1:51372288-51372307 | Msa1023470:CDS | 30.0% |
| TTCAATAAGCTAGATGACAA+TGG | - | chr7_1:51372334-51372353 | Msa1023470:CDS | 30.0% | |
| !! | ATAAGGTATCCTTTTAAGCA+AGG | - | chr7_1:51372625-51372644 | Msa1023470:intron | 30.0% |
| AAGTCATATAGCAACTAGTA+TGG | + | chr7_1:51372673-51372692 | None:intergenic | 30.0% | |
| TCAGATTAGAGTCTAATTTG+TGG | - | chr7_1:51372743-51372762 | Msa1023470:intron | 30.0% | |
| AGAAATCAACTGTATGAAGT+AGG | + | chr7_1:51372990-51373009 | None:intergenic | 30.0% | |
| !! | TAGTGCTACTTAATAGCTTT+AGG | - | chr7_1:51373110-51373129 | Msa1023470:intron | 30.0% |
| ! | CAAACTCATGATTTCCTTTT+AGG | - | chr7_1:51373242-51373261 | Msa1023470:intron | 30.0% |
| !! | ATGATTTCCTTTTAGGTACT+TGG | - | chr7_1:51373249-51373268 | Msa1023470:intron | 30.0% |
| GTTTAGACTAACATTAGTGA+TGG | - | chr7_1:51373309-51373328 | Msa1023470:intron | 30.0% | |
| !! | TGATGGAGATTGTTTTACTT+GGG | - | chr7_1:51373326-51373345 | Msa1023470:intron | 30.0% |
| TAAAGCATGTTAATGCAATG+TGG | - | chr7_1:51373395-51373414 | Msa1023470:intron | 30.0% | |
| AAAGCATGTTAATGCAATGT+GGG | - | chr7_1:51373396-51373415 | Msa1023470:intron | 30.0% | |
| !! | AAAGAACTTGATGGTAGTTT+TGG | - | chr7_1:51373510-51373529 | Msa1023470:intron | 30.0% |
| ATCATCTATGATAGCAAAGA+TGG | - | chr7_1:51373537-51373556 | Msa1023470:intron | 30.0% | |
| TTCAAACATAACCAACATGT+GGG | + | chr7_1:51373698-51373717 | None:intergenic | 30.0% | |
| !!! | CTGAGTTATTTTAGTGTAAC+CGG | - | chr7_1:51373908-51373927 | Msa1023470:intron | 30.0% |
| !!! | TGAGTTATTTTAGTGTAACC+GGG | - | chr7_1:51373909-51373928 | Msa1023470:intron | 30.0% |
| CTACATACTGATATACATAG+AGG | + | chr7_1:51374543-51374562 | None:intergenic | 30.0% | |
| ! | TATTGTTTTCATTTTGCCAG+GGG | - | chr7_1:51374893-51374912 | Msa1023470:CDS | 30.0% |
| ! | TCACCATATTTGATTTCATG+TGG | - | chr7_1:51375268-51375287 | Msa1023470:CDS | 30.0% |
| CAACCACATGAAATCAAATA+TGG | + | chr7_1:51375274-51375293 | None:intergenic | 30.0% | |
| TACTATACTAACCAATGAAC+TGG | + | chr7_1:51375359-51375378 | None:intergenic | 30.0% | |
| AATTTGGTCTCTCTAAATGT+TGG | + | chr7_1:51375498-51375517 | None:intergenic | 30.0% | |
| ! | TTAGAGAGACCAAATTTTGA+AGG | - | chr7_1:51375502-51375521 | Msa1023470:CDS | 30.0% |
| ACAAGGGCTAAATATGTTAT+TGG | + | chr7_1:51375573-51375592 | None:intergenic | 30.0% | |
| CAGATATGAAAATAGTATGC+AGG | + | chr7_1:51375628-51375647 | None:intergenic | 30.0% | |
| TTGGATGTTCATATGATCTA+AGG | - | chr7_1:51375862-51375881 | Msa1023470:CDS | 30.0% | |
| TGGATGTTCATATGATCTAA+GGG | - | chr7_1:51375863-51375882 | Msa1023470:CDS | 30.0% | |
| TTCATATGATCTAAGGGTAA+TGG | - | chr7_1:51375869-51375888 | Msa1023470:CDS | 30.0% | |
| TCATATGATCTAAGGGTAAT+GGG | - | chr7_1:51375870-51375889 | Msa1023470:CDS | 30.0% | |
| AAAATGAACAAAAGGTGAGA+TGG | - | chr7_1:51375931-51375950 | Msa1023470:CDS | 30.0% | |
| AAATGAACAAAAGGTGAGAT+GGG | - | chr7_1:51375932-51375951 | Msa1023470:CDS | 30.0% | |
| AAGAGATTGACAGTCATAAA+GGG | - | chr7_1:51375955-51375974 | Msa1023470:CDS | 30.0% | |
| TATATGTTCATGTACATTGC+AGG | - | chr7_1:51376039-51376058 | Msa1023470:CDS | 30.0% | |
| !! | CTAACTTTGTCACCTTGTTT+TGG | + | chr7_1:51369748-51369767 | None:intergenic | 35.0% |
| !! | AGTTAGCATTAGAGTTTTGG+TGG | - | chr7_1:51369762-51369781 | Msa1023470:CDS | 35.0% |
| ! | AAACAAAGTTCTGTTTGCTG+AGG | - | chr7_1:51369795-51369814 | Msa1023470:intron | 35.0% |
| AGCTTCTTAACATTGCCTTT+AGG | - | chr7_1:51369847-51369866 | Msa1023470:intron | 35.0% | |
| GCTTCTTAACATTGCCTTTA+GGG | - | chr7_1:51369848-51369867 | Msa1023470:intron | 35.0% | |
| CTCAATCCTATAAACTCATG+GGG | - | chr7_1:51370003-51370022 | Msa1023470:intron | 35.0% | |
| TCAATCCTATAAACTCATGG+GGG | - | chr7_1:51370004-51370023 | Msa1023470:intron | 35.0% | |
| CGGCATGCAAAATTGAAAAT+AGG | - | chr7_1:51370100-51370119 | Msa1023470:intron | 35.0% | |
| !! | TCAAATTCTGGAACGTTTCT+CGG | + | chr7_1:51370179-51370198 | None:intergenic | 35.0% |
| CGACTTCTTTACTCAAATTC+TGG | + | chr7_1:51370191-51370210 | None:intergenic | 35.0% | |
| AAACTTGTCATAACCGCATT+TGG | + | chr7_1:51370267-51370286 | None:intergenic | 35.0% | |
| CACACTAATTCTTCAATCTG+TGG | - | chr7_1:51370425-51370444 | Msa1023470:intron | 35.0% | |
| CTTCAATCTGTGGTTTGAAT+AGG | - | chr7_1:51370435-51370454 | Msa1023470:intron | 35.0% | |
| TTTAGTCCCAAGAAACTGAT+TGG | - | chr7_1:51370540-51370559 | Msa1023470:intron | 35.0% | |
| !! | GATTTTGTTTGTTGAAGCAG+AGG | - | chr7_1:51370639-51370658 | Msa1023470:intron | 35.0% |
| TCTGTCACCATAAACGTTAA+TGG | + | chr7_1:51370970-51370989 | None:intergenic | 35.0% | |
| ! | ATTTTCTCCACGTCATTAAG+GGG | + | chr7_1:51371057-51371076 | None:intergenic | 35.0% |
| ! | CATTTTCTCCACGTCATTAA+GGG | + | chr7_1:51371058-51371077 | None:intergenic | 35.0% |
| !! | TTTTTAAAGAGGAGGAAGAG+AGG | + | chr7_1:51371383-51371402 | None:intergenic | 35.0% |
| !! | TTAGGTGGTTTTTAAAGAGG+AGG | + | chr7_1:51371391-51371410 | None:intergenic | 35.0% |
| GAGAGATAAGGTGAAAAATG+GGG | + | chr7_1:51371444-51371463 | None:intergenic | 35.0% | |
| CGAGAGATAAGGTGAAAAAT+GGG | + | chr7_1:51371445-51371464 | None:intergenic | 35.0% | |
| TCGAGAGATAAGGTGAAAAA+TGG | + | chr7_1:51371446-51371465 | None:intergenic | 35.0% | |
| CGATTGGGAAATTTATTCAG+GGG | + | chr7_1:51371541-51371560 | None:intergenic | 35.0% | |
| CCGATTGGGAAATTTATTCA+GGG | + | chr7_1:51371542-51371561 | None:intergenic | 35.0% | |
| CCCTGAATAAATTTCCCAAT+CGG | - | chr7_1:51371539-51371558 | Msa1023470:intron | 35.0% | |
| TCCGATTGGGAAATTTATTC+AGG | + | chr7_1:51371543-51371562 | None:intergenic | 35.0% | |
| CCTCATCAATATTTCTTCAC+AGG | + | chr7_1:51371902-51371921 | None:intergenic | 35.0% | |
| CCTGTGAAGAAATATTGATG+AGG | - | chr7_1:51371899-51371918 | Msa1023470:intron | 35.0% | |
| CTTAAAGGAATTTCACATGG+TGG | - | chr7_1:51372111-51372130 | Msa1023470:CDS | 35.0% | |
| GTGAAATTGCTAACAAGAAC+CGG | + | chr7_1:51372255-51372274 | None:intergenic | 35.0% | |
| ATACAAGGTTCTACGCTATA+AGG | - | chr7_1:51372608-51372627 | Msa1023470:intron | 35.0% | |
| ! | ATCCTTTTAAGCAAGGAGTT+TGG | - | chr7_1:51372632-51372651 | Msa1023470:intron | 35.0% |
| ! | TCAATGCTCAGAATTGATTC+AGG | + | chr7_1:51372949-51372968 | None:intergenic | 35.0% |
| ! | TGTCTTTTGATGAATTCTGC+AGG | - | chr7_1:51373017-51373036 | Msa1023470:intron | 35.0% |
| CTGCATGTTCCAAAATTTGA+TGG | - | chr7_1:51373078-51373097 | Msa1023470:intron | 35.0% | |
| ! | ACTTGCAGTCCATCAAATTT+TGG | + | chr7_1:51373090-51373109 | None:intergenic | 35.0% |
| TGTTGGACAATAGAACATAG+TGG | - | chr7_1:51373171-51373190 | Msa1023470:intron | 35.0% | |
| !! | GTGATGGAGATTGTTTTACT+TGG | - | chr7_1:51373325-51373344 | Msa1023470:intron | 35.0% |
| AATGATGAAATCAGCCTCAT+CGG | + | chr7_1:51373435-51373454 | None:intergenic | 35.0% | |
| AAGTCCTCAAAAGAACTTGA+TGG | - | chr7_1:51373501-51373520 | Msa1023470:intron | 35.0% | |
| ! | ACTACCATCAAGTTCTTTTG+AGG | + | chr7_1:51373508-51373527 | None:intergenic | 35.0% |
| AGTATTAATGTCCCACATGT+TGG | - | chr7_1:51373684-51373703 | Msa1023470:intron | 35.0% | |
| GTTCAAACATAACCAACATG+TGG | + | chr7_1:51373699-51373718 | None:intergenic | 35.0% | |
| ! | CATGTTGGTTATGTTTGAAC+AGG | - | chr7_1:51373699-51373718 | Msa1023470:intron | 35.0% |
| TTGGTTATGTTTGAACAGGA+TGG | - | chr7_1:51373703-51373722 | Msa1023470:intron | 35.0% | |
| ATGAATATACCAGTAGGGAA+TGG | + | chr7_1:51373832-51373851 | None:intergenic | 35.0% | |
| GGGAAATGAATATACCAGTA+GGG | + | chr7_1:51373837-51373856 | None:intergenic | 35.0% | |
| AGGGAAATGAATATACCAGT+AGG | + | chr7_1:51373838-51373857 | None:intergenic | 35.0% | |
| TTACACACGCAAAAATATCC+CGG | + | chr7_1:51373930-51373949 | None:intergenic | 35.0% | |
| TGTGTTCGATCATTCAAACA+TGG | - | chr7_1:51374429-51374448 | Msa1023470:intron | 35.0% | |
| GGTTTGAAGAATGTTGTTCT+TGG | - | chr7_1:51374460-51374479 | Msa1023470:intron | 35.0% | |
| GATATACATAGAGGTGAATG+TGG | + | chr7_1:51374534-51374553 | None:intergenic | 35.0% | |
| ! | GTCCTTTTCAAAACATGTCA+GGG | + | chr7_1:51374936-51374955 | None:intergenic | 35.0% |
| ! | AGTCCTTTTCAAAACATGTC+AGG | + | chr7_1:51374937-51374956 | None:intergenic | 35.0% |
| ! | AGAAATCTTGCATTTTGCCA+GGG | + | chr7_1:51375163-51375182 | None:intergenic | 35.0% |
| ! | AAGAAATCTTGCATTTTGCC+AGG | + | chr7_1:51375164-51375183 | None:intergenic | 35.0% |
| ! | ATTTGATTTCATGTGGTTGC+AGG | - | chr7_1:51375275-51375294 | Msa1023470:intron | 35.0% |
| ! | TTTGATTTCATGTGGTTGCA+GGG | - | chr7_1:51375276-51375295 | Msa1023470:intron | 35.0% |
| TCAAAATCTGCCTTGACAAA+CGG | - | chr7_1:51375327-51375346 | Msa1023470:intron | 35.0% | |
| GAGTGATTGAAAATGGAAGT+TGG | - | chr7_1:51375533-51375552 | Msa1023470:CDS | 35.0% | |
| GCATGAGTTGTGAAAATAGT+TGG | + | chr7_1:51375752-51375771 | None:intergenic | 35.0% | |
| CATATGATCTAAGGGTAATG+GGG | - | chr7_1:51375871-51375890 | Msa1023470:CDS | 35.0% | |
| GAAGAGATTGACAGTCATAA+AGG | - | chr7_1:51375954-51375973 | Msa1023470:CDS | 35.0% | |
| ! | TCATAAAGGGTGTGTAATCT+TGG | - | chr7_1:51375968-51375987 | Msa1023470:CDS | 35.0% |
| GAAAATCCCTCACCAAAACA+AGG | - | chr7_1:51369733-51369752 | Msa1023470:CDS | 40.0% | |
| !!! | TTGTCACCTTGTTTTGGTGA+GGG | + | chr7_1:51369742-51369761 | None:intergenic | 40.0% |
| !!! | TTTGTCACCTTGTTTTGGTG+AGG | + | chr7_1:51369743-51369762 | None:intergenic | 40.0% |
| AGTCTTGCAATAGTCCCTAA+AGG | + | chr7_1:51369865-51369884 | None:intergenic | 40.0% | |
| CAATCCTATAAACTCATGGG+GGG | - | chr7_1:51370005-51370024 | Msa1023470:intron | 40.0% | |
| TCTTTCTGTGATGCCAAATG+CGG | - | chr7_1:51370251-51370270 | Msa1023470:intron | 40.0% | |
| TTAAATCTCCTCCAGAAGCA+TGG | - | chr7_1:51370285-51370304 | Msa1023470:intron | 40.0% | |
| ACACACTCACACACAAACTA+AGG | + | chr7_1:51370374-51370393 | None:intergenic | 40.0% | |
| CAACCTCCAATCAGTTTCTT+GGG | + | chr7_1:51370549-51370568 | None:intergenic | 40.0% | |
| CAAGAAACTGATTGGAGGTT+GGG | - | chr7_1:51370548-51370567 | Msa1023470:intron | 40.0% | |
| ! | AGTTTTCTCACTTTCCCCTT+AGG | - | chr7_1:51370685-51370704 | Msa1023470:intron | 40.0% |
| ATATGCAACACTGCTCCTAA+GGG | + | chr7_1:51370703-51370722 | None:intergenic | 40.0% | |
| AATATGCAACACTGCTCCTA+AGG | + | chr7_1:51370704-51370723 | None:intergenic | 40.0% | |
| CAGTGTTGCATATTCTCCAA+CGG | - | chr7_1:51370710-51370729 | Msa1023470:intron | 40.0% | |
| AGCTTACAAAAGAGAACCGT+TGG | + | chr7_1:51370729-51370748 | None:intergenic | 40.0% | |
| !! | CTGTAGGTATCGGTAATATC+TGG | + | chr7_1:51370870-51370889 | None:intergenic | 40.0% |
| GATCCTAAATCCCCTATTTC+TGG | - | chr7_1:51370928-51370947 | Msa1023470:intron | 40.0% | |
| AGCATATCCACCAGAAATAG+GGG | + | chr7_1:51370941-51370960 | None:intergenic | 40.0% | |
| CAGCATATCCACCAGAAATA+GGG | + | chr7_1:51370942-51370961 | None:intergenic | 40.0% | |
| ! | TGGAGCACCATTAACGTTTA+TGG | - | chr7_1:51370960-51370979 | Msa1023470:intron | 40.0% |
| GTTTATGGTGACAGATGACT+TGG | - | chr7_1:51370975-51370994 | Msa1023470:intron | 40.0% | |
| ACTCCAATGTCATCCATTGA+CGG | - | chr7_1:51371003-51371022 | Msa1023470:intron | 40.0% | |
| ATACCGTCAATGGATGACAT+TGG | + | chr7_1:51371009-51371028 | None:intergenic | 40.0% | |
| ! | CCATTTTCTCCACGTCATTA+AGG | + | chr7_1:51371059-51371078 | None:intergenic | 40.0% |
| CCTTAATGACGTGGAGAAAA+TGG | - | chr7_1:51371056-51371075 | Msa1023470:intron | 40.0% | |
| TAATGACGTGGAGAAAATGG+TGG | - | chr7_1:51371059-51371078 | Msa1023470:intron | 40.0% | |
| TGGAAATCTTGCAATTAGCC+AGG | - | chr7_1:51371079-51371098 | Msa1023470:intron | 40.0% | |
| TTGCTCTTGGTAAATTTGCC+AGG | + | chr7_1:51371128-51371147 | None:intergenic | 40.0% | |
| TGGCAAATTTACCAAGAGCA+AGG | - | chr7_1:51371127-51371146 | Msa1023470:intron | 40.0% | |
| GTGAGAGAAAATGGAGGAAA+AGG | + | chr7_1:51371218-51371237 | None:intergenic | 40.0% | |
| TCTCAAGTGAGAGAAAATGG+AGG | + | chr7_1:51371224-51371243 | None:intergenic | 40.0% | |
| GCACAGAGAGGGAAAAATAA+AGG | + | chr7_1:51371254-51371273 | None:intergenic | 40.0% | |
| GTTTCATGGCTAATAGATGC+CGG | + | chr7_1:51371345-51371364 | None:intergenic | 40.0% | |
| !! | GTTCAAAGGTGTTGGTTTCA+TGG | + | chr7_1:51371359-51371378 | None:intergenic | 40.0% |
| TCACCTTATCTCTCGATTTC+CGG | - | chr7_1:51371450-51371469 | Msa1023470:intron | 40.0% | |
| TTCACAAATGACACCCATGA+TGG | + | chr7_1:51371476-51371495 | None:intergenic | 40.0% | |
| GTAATCAAGCTTATTGCACC+TGG | + | chr7_1:51372161-51372180 | None:intergenic | 40.0% | |
| ATCTCATCTTCTTGCGATAC+CGG | - | chr7_1:51372233-51372252 | Msa1023470:intron | 40.0% | |
| ! | TAGTATGGCTCTGTTTGACA+TGG | + | chr7_1:51372658-51372677 | None:intergenic | 40.0% |
| ! | GCACCAACACTTTTCCTTTT+AGG | - | chr7_1:51373045-51373064 | Msa1023470:intron | 40.0% |
| ! | GCACCTAAAAGGAAAAGTGT+TGG | + | chr7_1:51373051-51373070 | None:intergenic | 40.0% |
| !! | TTCCTTTTAGGTACTTGGTG+TGG | - | chr7_1:51373254-51373273 | Msa1023470:intron | 40.0% |
| ATCCACACCAAGTACCTAAA+AGG | + | chr7_1:51373259-51373278 | None:intergenic | 40.0% | |
| ! | AATGCAATGTGGGCTATAAC+AGG | - | chr7_1:51373406-51373425 | Msa1023470:intron | 40.0% |
| ! | ATGCAATGTGGGCTATAACA+GGG | - | chr7_1:51373407-51373426 | Msa1023470:intron | 40.0% |
| ! | TTGAGGACTTTTGATCTGCA+GGG | + | chr7_1:51373491-51373510 | None:intergenic | 40.0% |
| ! | TTTGAGGACTTTTGATCTGC+AGG | + | chr7_1:51373492-51373511 | None:intergenic | 40.0% |
| ! | AGTTCTGACCTTAAGTGCTT+TGG | - | chr7_1:51373949-51373968 | Msa1023470:intron | 40.0% |
| ! | CAACAACACCAAAGCACTTA+AGG | + | chr7_1:51373960-51373979 | None:intergenic | 40.0% |
| GATACCGCCAGAACAATAAT+AGG | - | chr7_1:51374394-51374413 | Msa1023470:intron | 40.0% | |
| AGCTCCTATTATTGTTCTGG+CGG | + | chr7_1:51374401-51374420 | None:intergenic | 40.0% | |
| CTGAGCTCCTATTATTGTTC+TGG | + | chr7_1:51374404-51374423 | None:intergenic | 40.0% | |
| AACATTCTTCAAACCTCCTC+AGG | + | chr7_1:51374455-51374474 | None:intergenic | 40.0% | |
| !!! | GTCCCTGACATGTTTTGAAA+AGG | - | chr7_1:51374931-51374950 | Msa1023470:CDS | 40.0% |
| ! | TTGACCAGACACAATTTTCC+AGG | - | chr7_1:51374991-51375010 | Msa1023470:CDS | 40.0% |
| ! | TGACCAGACACAATTTTCCA+GGG | - | chr7_1:51374992-51375011 | Msa1023470:CDS | 40.0% |
| ! | GAAATCTTGCATTTTGCCAG+GGG | + | chr7_1:51375162-51375181 | None:intergenic | 40.0% |
| ! | GTAGTATAAGATTGGCCAGA+TGG | - | chr7_1:51375184-51375203 | Msa1023470:CDS | 40.0% |
| ! | GTTTGTCAAGGCAGATTTTG+AGG | + | chr7_1:51375328-51375347 | None:intergenic | 40.0% |
| ACTAACCAATGAACTGGTTG+AGG | + | chr7_1:51375353-51375372 | None:intergenic | 40.0% | |
| ATGTAGGACGAGGTTATGTT+TGG | + | chr7_1:51375387-51375406 | None:intergenic | 40.0% | |
| ! | TATACCTTTGGCTTCTTCAG+GGG | + | chr7_1:51376105-51376124 | None:intergenic | 40.0% |
| ! | CTATACCTTTGGCTTCTTCA+GGG | + | chr7_1:51376106-51376125 | None:intergenic | 40.0% |
| ! | TCTGTTTGCTGAGGCAGATA+AGG | - | chr7_1:51369804-51369823 | Msa1023470:intron | 45.0% |
| TCTATGGTCAGACACATGCA+AGG | - | chr7_1:51369972-51369991 | Msa1023470:intron | 45.0% | |
| TAAGCCCCCCATGAGTTTAT+AGG | + | chr7_1:51370012-51370031 | None:intergenic | 45.0% | |
| CTACTACCTCTGTGAGAACA+CGG | - | chr7_1:51370080-51370099 | Msa1023470:intron | 45.0% | |
| AGTCCCAAGAAACTGATTGG+AGG | - | chr7_1:51370543-51370562 | Msa1023470:intron | 45.0% | |
| CCAACCTCCAATCAGTTTCT+TGG | + | chr7_1:51370550-51370569 | None:intergenic | 45.0% | |
| CCAAGAAACTGATTGGAGGT+TGG | - | chr7_1:51370547-51370566 | Msa1023470:intron | 45.0% | |
| AACTGATTGGAGGTTGGGAT+TGG | - | chr7_1:51370553-51370572 | Msa1023470:intron | 45.0% | |
| TATGCAACACTGCTCCTAAG+GGG | + | chr7_1:51370702-51370721 | None:intergenic | 45.0% | |
| TCAGATTGAGCGGAAATGGT+AGG | + | chr7_1:51370838-51370857 | None:intergenic | 45.0% | |
| GAGTTCAGATTGAGCGGAAA+TGG | + | chr7_1:51370842-51370861 | None:intergenic | 45.0% | |
| TTTCCGCTCAATCTGAACTC+AGG | - | chr7_1:51370842-51370861 | Msa1023470:intron | 45.0% | |
| GTTCCTGAGTTCAGATTGAG+CGG | + | chr7_1:51370848-51370867 | None:intergenic | 45.0% | |
| CCACCAGAAATAGGGGATTT+AGG | + | chr7_1:51370934-51370953 | None:intergenic | 45.0% | |
| !! | CCTAAATCCCCTATTTCTGG+TGG | - | chr7_1:51370931-51370950 | Msa1023470:intron | 45.0% |
| CCAGCATATCCACCAGAAAT+AGG | + | chr7_1:51370943-51370962 | None:intergenic | 45.0% | |
| !! | CCTATTTCTGGTGGATATGC+TGG | - | chr7_1:51370940-51370959 | Msa1023470:intron | 45.0% |
| ATTAGCCAGGAAATCATGCC+AGG | - | chr7_1:51371092-51371111 | Msa1023470:intron | 45.0% | |
| !!! | GTGGTGGTGTTTTTTGTGGA+AGG | + | chr7_1:51371287-51371306 | None:intergenic | 45.0% |
| !!! | GGTTGTGGTGGTGTTTTTTG+TGG | + | chr7_1:51371291-51371310 | None:intergenic | 45.0% |
| AGATGCCGGAGTATGTAGAT+CGG | + | chr7_1:51371331-51371350 | None:intergenic | 45.0% | |
| ! | AGAGAGGAGTTCAAAGGTGT+TGG | + | chr7_1:51371367-51371386 | None:intergenic | 45.0% |
| ! | ATGGTCGCTGGTCACATTTT+CGG | + | chr7_1:51371610-51371629 | None:intergenic | 45.0% |
| GAAAAGATATGGATGGTCGC+TGG | + | chr7_1:51371622-51371641 | None:intergenic | 45.0% | |
| ATATCCACTTAGGCCCTACT+AGG | + | chr7_1:51371777-51371796 | None:intergenic | 45.0% | |
| GGCCAAACTCCTTGCTTAAA+AGG | + | chr7_1:51372637-51372656 | None:intergenic | 45.0% | |
| GCAGATCTTGAGCACCTAAA+AGG | + | chr7_1:51373062-51373081 | None:intergenic | 45.0% | |
| ACCTATAGGACACTTCGTGA+CGG | - | chr7_1:51373458-51373477 | Msa1023470:intron | 45.0% | |
| ! | GACTTTTGATCTGCAGGGAA+TGG | + | chr7_1:51373486-51373505 | None:intergenic | 45.0% |
| !!! | TGGACAGATTGGCCTTTTCT+AGG | - | chr7_1:51373729-51373748 | Msa1023470:intron | 45.0% |
| !!! | GGACAGATTGGCCTTTTCTA+GGG | - | chr7_1:51373730-51373749 | Msa1023470:intron | 45.0% |
| !!! | TGGCCTTTTCTAGGGTATTG+CGG | - | chr7_1:51373738-51373757 | Msa1023470:intron | 45.0% |
| TCATTTGCACCATTCCCTAC+TGG | - | chr7_1:51373820-51373839 | Msa1023470:intron | 45.0% | |
| GATCATTCAAACATGGCCTG+AGG | - | chr7_1:51374436-51374455 | Msa1023470:intron | 45.0% | |
| ! | GACCAGACACAATTTTCCAG+GGG | - | chr7_1:51374993-51375012 | Msa1023470:CDS | 45.0% |
| AACCCCTGGAAAATTGTGTC+TGG | + | chr7_1:51374998-51375017 | None:intergenic | 45.0% | |
| CATCGCAAATGAACATGCCA+GGG | + | chr7_1:51375064-51375083 | None:intergenic | 45.0% | |
| TCATCGCAAATGAACATGCC+AGG | + | chr7_1:51375065-51375084 | None:intergenic | 45.0% | |
| TTTGCGATGAGCAGATTTGC+TGG | - | chr7_1:51375075-51375094 | Msa1023470:CDS | 45.0% | |
| ! | TGGCAAACGTCCTTTTGTCA+GGG | - | chr7_1:51375110-51375129 | Msa1023470:CDS | 45.0% |
| ATGCAGAAAGCCCTGACAAA+AGG | + | chr7_1:51375123-51375142 | None:intergenic | 45.0% | |
| ! | GTATAAGATTGGCCAGATGG+AGG | - | chr7_1:51375187-51375206 | Msa1023470:CDS | 45.0% |
| ATTGGCCAGATGGAGGTAAA+AGG | - | chr7_1:51375194-51375213 | Msa1023470:CDS | 45.0% | |
| TTGGCCAGATGGAGGTAAAA+GGG | - | chr7_1:51375195-51375214 | Msa1023470:CDS | 45.0% | |
| !! | TCTAAGGGTAATGGGGAGTA+AGG | - | chr7_1:51375878-51375897 | Msa1023470:CDS | 45.0% |
| ! | ATACCTTTGGCTTCTTCAGG+GGG | + | chr7_1:51376104-51376123 | None:intergenic | 45.0% |
| AGGGACTATTGCAAGACTCG+TGG | - | chr7_1:51369867-51369886 | Msa1023470:intron | 50.0% | |
| CAGAGGTAGTAGGACTGGAA+GGG | + | chr7_1:51370072-51370091 | None:intergenic | 50.0% | |
| ACAGAGGTAGTAGGACTGGA+AGG | + | chr7_1:51370073-51370092 | None:intergenic | 50.0% | |
| TCTCACAGAGGTAGTAGGAC+TGG | + | chr7_1:51370077-51370096 | None:intergenic | 50.0% | |
| CGTGTTCTCACAGAGGTAGT+AGG | + | chr7_1:51370082-51370101 | None:intergenic | 50.0% | |
| !! | CATTGACTCCATGCTTCTGG+AGG | + | chr7_1:51370296-51370315 | None:intergenic | 50.0% |
| ! | CTCCAGAAGCATGGAGTCAA+TGG | - | chr7_1:51370294-51370313 | Msa1023470:intron | 50.0% |
| !! | TGCCATTGACTCCATGCTTC+TGG | + | chr7_1:51370299-51370318 | None:intergenic | 50.0% |
| ! | TTGGAGGTTGGGATTGGTAG+AGG | - | chr7_1:51370559-51370578 | Msa1023470:intron | 50.0% |
| ! | GGTTGGGATTGGTAGAGGAA+AGG | - | chr7_1:51370564-51370583 | Msa1023470:intron | 50.0% |
| GAAGGTTCCCCTTAATGACG+TGG | - | chr7_1:51371047-51371066 | Msa1023470:intron | 50.0% | |
| TTGCTCCTGGCATGATTTCC+TGG | + | chr7_1:51371100-51371119 | None:intergenic | 50.0% | |
| ATTTACCAAGAGCAAGGCCC+TGG | - | chr7_1:51371133-51371152 | Msa1023470:intron | 50.0% | |
| TGACATGTTACCCCTTGCCA+GGG | + | chr7_1:51371164-51371183 | None:intergenic | 50.0% | |
| TTGACATGTTACCCCTTGCC+AGG | + | chr7_1:51371165-51371184 | None:intergenic | 50.0% | |
| GAGAGATCGAAGCACAGAGA+GGG | + | chr7_1:51371265-51371284 | None:intergenic | 50.0% | |
| ACCACAACCACCCATCTTCA+CGG | - | chr7_1:51371302-51371321 | Msa1023470:intron | 50.0% | |
| AGATCGGTCACCGTGAAGAT+GGG | + | chr7_1:51371315-51371334 | None:intergenic | 50.0% | |
| TAGATCGGTCACCGTGAAGA+TGG | + | chr7_1:51371316-51371335 | None:intergenic | 50.0% | |
| GGTGACCGATCTACATACTC+CGG | - | chr7_1:51371323-51371342 | Msa1023470:intron | 50.0% | |
| GGAGGAAGAGAGGAGTTCAA+AGG | + | chr7_1:51371373-51371392 | None:intergenic | 50.0% | |
| TGGCCGGAAATCGAGAGATA+AGG | + | chr7_1:51371456-51371475 | None:intergenic | 50.0% | |
| TCTCGATTTCCGGCCATCAT+GGG | - | chr7_1:51371460-51371479 | Msa1023470:intron | 50.0% | |
| CAAATGACACCCATGATGGC+CGG | + | chr7_1:51371472-51371491 | None:intergenic | 50.0% | |
| ! | TCCCAATCGGAGCATTTCAC+CGG | - | chr7_1:51371552-51371571 | Msa1023470:intron | 50.0% |
| ! | TGGTCACATTTTCGGCAACG+CGG | + | chr7_1:51371602-51371621 | None:intergenic | 50.0% |
| ! | GACCACTCATTTGATTGGCC+AGG | - | chr7_1:51372140-51372159 | Msa1023470:intron | 50.0% |
| CACCTGGCCAATCAAATGAG+TGG | + | chr7_1:51372145-51372164 | None:intergenic | 50.0% | |
| GCTATAACAGGGAACCGATG+AGG | - | chr7_1:51373418-51373437 | Msa1023470:intron | 50.0% | |
| CCTATAGGACACTTCGTGAC+GGG | - | chr7_1:51373459-51373478 | Msa1023470:intron | 50.0% | |
| CAGCCGCAATACCCTAGAAA+AGG | + | chr7_1:51373744-51373763 | None:intergenic | 50.0% | |
| !! | TTCTAGGGTATTGCGGCTGA+TGG | - | chr7_1:51373745-51373764 | Msa1023470:intron | 50.0% |
| TGCTGAATCTGGGTAAGCTC+TGG | - | chr7_1:51374259-51374278 | Msa1023470:intron | 50.0% | |
| CTGGCGGTATCTCTCAACAA+AGG | + | chr7_1:51374385-51374404 | None:intergenic | 50.0% | |
| CATTCAAACATGGCCTGAGG+AGG | - | chr7_1:51374439-51374458 | Msa1023470:intron | 50.0% | |
| ACATGTCAGGGACTTTGCGA+GGG | + | chr7_1:51374924-51374943 | None:intergenic | 50.0% | |
| AACATGTCAGGGACTTTGCG+AGG | + | chr7_1:51374925-51374944 | None:intergenic | 50.0% | |
| ! | AATTTTCCAGGGGTTGAGCC+AGG | - | chr7_1:51375003-51375022 | Msa1023470:CDS | 50.0% |
| ! | ATTTTCCAGGGGTTGAGCCA+GGG | - | chr7_1:51375004-51375023 | Msa1023470:CDS | 50.0% |
| CTGACAAAAGGACGTTTGCC+AGG | + | chr7_1:51375111-51375130 | None:intergenic | 50.0% | |
| ! | CTGGCAAACGTCCTTTTGTC+AGG | - | chr7_1:51375109-51375128 | Msa1023470:CDS | 50.0% |
| ! | AGGGCTTTCTGCATTTTGCC+AGG | - | chr7_1:51375129-51375148 | Msa1023470:CDS | 50.0% |
| ! | GGGCTTTCTGCATTTTGCCA+GGG | - | chr7_1:51375130-51375149 | Msa1023470:CDS | 50.0% |
| ! | CACTCCCTTTTACCTCCATC+TGG | + | chr7_1:51375202-51375221 | None:intergenic | 50.0% |
| AACGGCCTCAACCAGTTCAT+TGG | - | chr7_1:51375345-51375364 | Msa1023470:intron | 50.0% | |
| GGGTGTGTAATCTTGGTCAC+TGG | - | chr7_1:51375975-51375994 | Msa1023470:CDS | 50.0% | |
| ACTCATGGGGGGCTTATTGC+CGG | - | chr7_1:51370016-51370035 | Msa1023470:intron | 55.0% | |
| TGCATGCCGTGTTCTCACAG+AGG | + | chr7_1:51370089-51370108 | None:intergenic | 55.0% | |
| ATGCCAGGAGCAAGAACTCC+TGG | - | chr7_1:51371107-51371126 | Msa1023470:intron | 55.0% | |
| TTGCCAGGAGTTCTTGCTCC+TGG | + | chr7_1:51371113-51371132 | None:intergenic | 55.0% | |
| GACATGTTACCCCTTGCCAG+GGG | + | chr7_1:51371163-51371182 | None:intergenic | 55.0% | |
| GGAGAGATCGAAGCACAGAG+AGG | + | chr7_1:51371266-51371285 | None:intergenic | 55.0% | |
| GTGAAGATGGGTGGTTGTGG+TGG | + | chr7_1:51371303-51371322 | None:intergenic | 55.0% | |
| ACCGTGAAGATGGGTGGTTG+TGG | + | chr7_1:51371306-51371325 | None:intergenic | 55.0% | |
| CTCTCGATTTCCGGCCATCA+TGG | - | chr7_1:51371459-51371478 | Msa1023470:intron | 55.0% | |
| GCCGGTGAAATGCTCCGATT+GGG | + | chr7_1:51371556-51371575 | None:intergenic | 55.0% | |
| TGCCGGTGAAATGCTCCGAT+TGG | + | chr7_1:51371557-51371576 | None:intergenic | 55.0% | |
| ! | GTCACATTTTCGGCAACGCG+GGG | + | chr7_1:51371600-51371619 | None:intergenic | 55.0% |
| ! | GGTCACATTTTCGGCAACGC+GGG | + | chr7_1:51371601-51371620 | None:intergenic | 55.0% |
| GCTTCCTAGTAGGGCCTAAG+TGG | - | chr7_1:51371770-51371789 | Msa1023470:intron | 55.0% | |
| ! | CCCGTCACGAAGTGTCCTAT+AGG | + | chr7_1:51373462-51373481 | None:intergenic | 55.0% |
| CATGTCAGGGACTTTGCGAG+GGG | + | chr7_1:51374923-51374942 | None:intergenic | 55.0% | |
| TTTGCCAGGAGCTAAAGCCC+TGG | - | chr7_1:51375044-51375063 | Msa1023470:CDS | 55.0% | |
| TTTGCTGGCGATTCTGCTCC+TGG | - | chr7_1:51375090-51375109 | Msa1023470:CDS | 55.0% | |
| CTGGTTGAGGCCGTTTGTCA+AGG | + | chr7_1:51375340-51375359 | None:intergenic | 55.0% | |
| GTTTGCCAGGGCCTTGCTCT+TGG | + | chr7_1:51371141-51371160 | None:intergenic | 60.0% | |
| TCGGTCACCGTGAAGATGGG+TGG | + | chr7_1:51371312-51371331 | None:intergenic | 60.0% | |
| !! | AGTTTTGGTGCGGTGGCTGC+CGG | + | chr7_1:51371574-51371593 | None:intergenic | 60.0% |
| !! | GGGGACAAGTTTTGGTGCGG+TGG | + | chr7_1:51371581-51371600 | None:intergenic | 60.0% |
| !! | CGCGGGGACAAGTTTTGGTG+CGG | + | chr7_1:51371584-51371603 | None:intergenic | 60.0% |
| ! | GGCAACGCGGGGACAAGTTT+TGG | + | chr7_1:51371589-51371608 | None:intergenic | 60.0% |
| CTTTGCGAGGGGTTAACCCC+TGG | + | chr7_1:51374912-51374931 | None:intergenic | 60.0% | |
| GGCAAATGCGCTTCTGGCAC+AGG | + | chr7_1:51375030-51375049 | None:intergenic | 60.0% | |
| ! | GTGCCAGAAGCGCATTTGCC+AGG | - | chr7_1:51375030-51375049 | Msa1023470:CDS | 60.0% |
| GCTCCTGGCAAATGCGCTTC+TGG | + | chr7_1:51375036-51375055 | None:intergenic | 60.0% | |
| ! | CATGCCAGGGCTTTAGCTCC+TGG | + | chr7_1:51375051-51375070 | None:intergenic | 60.0% |
| TCGCCCCCTGAAGAAGCCAA+AGG | - | chr7_1:51376098-51376117 | Msa1023470:CDS | 60.0% | |
| CCCTTGCCAGGGGTTTGCCA+GGG | + | chr7_1:51371153-51371172 | None:intergenic | 65.0% | |
| CCCTGGCAAACCCCTGGCAA+GGG | - | chr7_1:51371150-51371169 | Msa1023470:intron | 65.0% | |
| CCTGGCAAACCCCTGGCAAG+GGG | - | chr7_1:51371151-51371170 | Msa1023470:intron | 65.0% | |
| TTTGCCAGGGCTTCTGCCCC+TGG | - | chr7_1:51375143-51375162 | Msa1023470:CDS | 65.0% | |
| TTTGCCAGGGGCAGAAGCCC+TGG | + | chr7_1:51375150-51375169 | None:intergenic | 65.0% | |
| GCAAGGCCCTGGCAAACCCC+TGG | - | chr7_1:51371144-51371163 | Msa1023470:intron | 70.0% | |
| GCCCTGGCAAACCCCTGGCA+AGG | - | chr7_1:51371149-51371168 | Msa1023470:intron | 70.0% | |
| CCCCTTGCCAGGGGTTTGCC+AGG | + | chr7_1:51371154-51371173 | None:intergenic | 70.0% | |
| ACAGGCCCTGGCTCAACCCC+TGG | + | chr7_1:51375012-51375031 | None:intergenic | 70.0% | |
| TGCGCTTCTGGCACAGGCCC+TGG | + | chr7_1:51375024-51375043 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 51369727 | 51376125 | 51369727 | ID=Msa1023470;Name=Msa1023470 |
| chr7_1 | mRNA | 51369727 | 51376125 | 51369727 | ID=Msa1023470-mRNA-1;Parent=Msa1023470;Name=Msa1023470-mRNA-1;_AED=0.15;_eAED=0.22;_QI=0|0|0|0.71|1|1|7|0|516 |
| chr7_1 | exon | 51375469 | 51376125 | 51375469 | ID=Msa1023470-mRNA-1:exon:10087;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51374828 | 51375287 | 51374828 | ID=Msa1023470-mRNA-1:exon:10086;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51372786 | 51372813 | 51372786 | ID=Msa1023470-mRNA-1:exon:10085;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51372275 | 51372424 | 51372275 | ID=Msa1023470-mRNA-1:exon:10084;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51372011 | 51372131 | 51372011 | ID=Msa1023470-mRNA-1:exon:10083;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51370486 | 51370555 | 51370486 | ID=Msa1023470-mRNA-1:exon:10082;Parent=Msa1023470-mRNA-1 |
| chr7_1 | exon | 51369727 | 51369791 | 51369727 | ID=Msa1023470-mRNA-1:exon:10081;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51375469 | 51376125 | 51375469 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51374828 | 51375287 | 51374828 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51372786 | 51372813 | 51372786 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51372275 | 51372424 | 51372275 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51372011 | 51372131 | 51372011 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51370486 | 51370555 | 51370486 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| chr7_1 | CDS | 51369727 | 51369791 | 51369727 | ID=Msa1023470-mRNA-1:cds;Parent=Msa1023470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
