AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024650 MtrunA17_Chr7g0242561 98.442 321 2 1 40 360 213 530 0.0 655
Msa1024650 MtrunA17_Chr7g0242561 100.000 39 0 0 1 39 1 39 3.33e-19 89.0
Msa1024650 MtrunA17_Chr4g0059951 72.897 321 84 1 40 360 230 547 1.16e-173 494
Msa1024650 MtrunA17_Chr7g0257751 65.231 325 110 1 36 360 211 532 1.32e-155 447
Msa1024650 MtrunA17_Chr1g0173541 65.109 321 109 1 40 360 209 526 2.38e-155 447
Msa1024650 MtrunA17_Chr4g0033371 54.859 319 140 2 40 358 229 543 1.86e-130 384
Msa1024650 MtrunA17_Chr0c02g0489761 57.143 287 119 2 41 327 236 518 1.11e-114 343
Msa1024650 MtrunA17_Chr5g0441691 55.903 288 123 2 40 327 225 508 1.64e-114 342
Msa1024650 MtrunA17_Chr1g0170281 57.491 287 117 3 41 327 276 557 1.44e-110 334
Msa1024650 MtrunA17_Chr4g0074811 54.007 287 128 2 41 327 249 531 1.53e-110 333
Msa1024650 MtrunA17_Chr1g0176751 55.082 305 127 4 41 340 282 581 5.83e-110 333
Msa1024650 MtrunA17_Chr1g0200601 53.135 303 137 3 41 343 188 485 8.63e-110 330
Msa1024650 MtrunA17_Chr5g0444171 54.167 288 128 2 41 328 250 533 9.48e-110 331
Msa1024650 MtrunA17_Chr8g0387671 55.749 287 123 2 41 327 224 506 1.37e-108 327
Msa1024650 MtrunA17_Chr3g0131181 54.007 287 127 3 41 327 187 468 2.36e-108 327
Msa1024650 MtrunA17_Chr5g0448721 54.355 287 126 3 41 327 254 535 2.32e-106 323
Msa1024650 MtrunA17_Chr5g0397101 54.007 287 127 3 41 327 225 506 1.12e-105 320
Msa1024650 MtrunA17_Chr8g0385341 52.613 287 131 2 41 327 188 469 1.79e-105 318
Msa1024650 MtrunA17_Chr3g0098951 52.218 293 130 3 41 327 242 530 7.58e-104 315
Msa1024650 MtrunA17_Chr1g0157131 51.389 288 136 3 41 328 232 515 3.83e-101 308
Msa1024650 MtrunA17_Chr7g0267751 52.778 288 131 3 40 327 292 574 4.91e-101 310
Msa1024650 MtrunA17_Chr1g0176421 50.000 324 124 5 41 332 319 636 6.47e-100 308
Msa1024650 MtrunA17_Chr4g0074791 49.129 287 131 3 41 327 254 525 1.56e-90 281
Msa1024650 MtrunA17_Chr5g0405421 42.000 300 158 5 36 328 254 544 1.80e-75 243
Msa1024650 MtrunA17_Chr4g0045261 34.483 290 177 5 40 324 298 579 6.07e-53 184
Msa1024650 MtrunA17_Chr5g0402551 34.483 290 177 5 40 324 295 576 1.90e-51 180
Msa1024650 MtrunA17_Chr7g0256001 34.483 290 178 5 40 324 302 584 2.66e-51 180
Msa1024650 MtrunA17_Chr8g0374701 33.793 290 179 5 40 324 289 570 4.62e-51 179
Msa1024650 MtrunA17_Chr7g0267771 51.235 162 74 1 40 201 245 401 5.87e-49 171
Msa1024650 MtrunA17_Chr3g0127571 33.775 302 182 7 40 336 299 587 1.87e-47 169
Msa1024650 MtrunA17_Chr7g0276111 32.414 290 177 6 40 321 305 583 5.48e-46 165
Msa1024650 MtrunA17_Chr5g0444191 59.664 119 45 1 41 159 66 181 1.03e-43 150
Msa1024650 MtrunA17_Chr8g0355131 30.619 307 182 8 44 325 208 508 3.58e-34 132
Msa1024650 MtrunA17_Chr1g0203881 50.000 100 50 0 44 143 202 301 1.80e-27 112
Msa1024650 MtrunA17_Chr1g0190131 41.964 112 64 1 40 150 162 273 1.61e-26 106
Msa1024650 MtrunA17_Chr1g0188171 37.086 151 91 2 177 326 1 148 1.49e-23 95.1
Msa1024650 MtrunA17_Chr5g0441771 42.149 121 49 2 90 210 2 101 6.90e-23 91.7
Msa1024650 MtrunA17_Chr1g0166281 35.762 151 93 2 177 326 1 148 8.42e-23 93.2
Msa1024650 MtrunA17_Chr3g0132591 43.564 101 57 0 41 141 260 360 7.67e-22 96.3
Msa1024650 MtrunA17_Chr5g0440931 34.899 149 93 2 177 324 1 146 1.12e-21 90.1
Msa1024650 MtrunA17_Chr7g0254731 34.899 149 93 2 177 324 1 146 2.02e-21 89.4
Msa1024650 MtrunA17_Chr3g0093271 34.228 149 94 2 177 324 52 197 2.78e-21 90.5
Msa1024650 MtrunA17_Chr6g0460211 34.228 149 94 2 177 324 1 146 4.55e-21 88.6
Msa1024650 MtrunA17_Chr7g0274941 39.423 104 61 1 40 141 171 274 1.96e-19 87.4
Msa1024650 MtrunA17_Chr5g0441781 52.000 75 35 1 253 327 1 74 5.37e-18 78.2
Msa1024650 MtrunA17_Chr4g0001331 42.424 99 51 3 46 142 181 275 2.99e-17 82.8
Msa1024650 MtrunA17_Chr4g0062221 31.250 144 93 3 184 324 7 147 1.05e-16 77.0
Msa1024650 MtrunA17_Chr8g0366401 29.139 151 100 2 181 327 10 157 2.80e-16 75.5
Msa1024650 MtrunA17_Chr2g0304111 37.168 113 65 4 45 155 184 292 4.62e-16 79.3
Msa1024650 MtrunA17_Chr1g0185001 30.345 145 96 3 181 324 5 145 6.50e-16 74.3
Msa1024650 MtrunA17_Chr8g0351681 34.810 158 89 4 183 330 44 197 6.63e-16 75.5
Msa1024650 MtrunA17_Chr6g0453681 43.000 100 49 3 46 142 178 272 1.13e-15 78.2
Msa1024650 MtrunA17_Chr4g0069301 39.394 99 54 4 46 142 188 282 2.42e-15 77.0
Msa1024650 MtrunA17_Chr6g0468751 42.424 99 49 3 46 141 178 271 5.03e-15 76.3
Msa1024650 MtrunA17_Chr4g0013131 37.037 108 62 3 46 151 173 276 5.36e-15 75.9
Msa1024650 MtrunA17_Chr3g0140631 39.423 104 59 3 44 145 192 293 1.10e-14 73.9
Msa1024650 MtrunA17_Chr6g0482731 31.206 141 93 2 185 324 23 160 1.61e-14 70.9
Msa1024650 MtrunA17_Chr7g0245911 32.515 163 97 5 177 329 36 195 1.89e-14 71.2
Msa1024650 MtrunA17_Chr7g0274101 33.775 151 96 2 177 326 1 148 2.00e-14 70.1
Msa1024650 MtrunA17_Chr2g0333821 40.404 99 53 4 46 142 175 269 2.71e-14 73.9
Msa1024650 MtrunA17_Chr1g0185221 32.955 176 103 6 42 212 161 326 2.85e-14 73.9
Msa1024650 MtrunA17_Chr2g0302431 37.383 107 61 4 46 150 182 284 3.08e-14 73.6
Msa1024650 MtrunA17_Chr5g0398751 30.345 145 95 2 181 324 5 144 3.25e-14 69.3
Msa1024650 MtrunA17_Chr8g0353621 31.206 141 90 4 11 146 129 267 3.79e-14 72.0
Msa1024650 MtrunA17_Chr2g0284011 34.677 124 67 5 34 151 161 276 3.92e-14 73.2
Msa1024650 MtrunA17_Chr8g0351491 30.282 142 92 4 5 142 130 268 4.43e-14 71.6
Msa1024650 MtrunA17_Chr3g0132671 38.000 100 54 3 46 142 208 302 7.05e-14 72.8
Msa1024650 MtrunA17_Chr3g0125381 34.000 100 63 2 44 142 110 207 8.30e-14 70.1
Msa1024650 MtrunA17_Chr7g0260191 40.777 103 55 3 42 142 161 259 1.37e-13 72.0
Msa1024650 MtrunA17_Chr8g0391691 34.395 157 89 4 188 341 36 181 1.39e-13 68.6
Msa1024650 MtrunA17_Chr1g0170551 37.000 100 58 2 44 142 163 258 1.77e-13 72.0
Msa1024650 MtrunA17_Chr6g0478601 34.959 123 67 4 29 143 285 402 2.33e-13 71.2
Msa1024650 MtrunA17_Chr7g0245231 30.263 152 101 3 181 331 23 170 4.41e-13 67.0
Msa1024650 MtrunA17_Chr7g0244521 34.579 107 64 3 46 150 173 275 4.50e-13 70.1
Msa1024650 MtrunA17_Chr6g0453671 40.000 100 52 3 46 142 178 272 6.51e-13 69.3
Msa1024650 MtrunA17_Chr1g0169581 30.496 141 92 2 187 324 3 140 8.92e-13 65.1
Msa1024650 MtrunA17_Chr4g0008561 33.333 111 71 3 44 152 178 287 1.32e-12 68.9
Msa1024650 MtrunA17_Chr8g0380661 28.235 170 110 5 37 196 151 318 1.40e-12 67.8
Msa1024650 MtrunA17_Chr5g0434951 32.143 140 88 3 187 324 3 137 1.95e-12 64.3
Msa1024650 MtrunA17_Chr1g0190831 39.806 103 56 3 42 142 161 259 1.99e-12 68.6
Msa1024650 MtrunA17_Chr5g0428031 37.624 101 57 3 46 144 169 265 2.02e-12 68.2
Msa1024650 MtrunA17_Chr4g0025671 41.748 103 54 3 42 142 165 263 2.07e-12 68.6
Msa1024650 MtrunA17_Chr2g0321841 40.196 102 57 2 42 142 161 259 2.39e-12 68.6
Msa1024650 MtrunA17_Chr8g0392951 29.286 140 96 1 185 324 21 157 2.46e-12 64.7
Msa1024650 MtrunA17_Chr2g0277501 35.644 101 61 4 45 141 160 260 2.96e-12 67.0
Msa1024650 MtrunA17_Chr1g0153321 40.000 105 58 3 45 145 309 412 3.06e-12 67.8
Msa1024650 MtrunA17_Chr8g0368681 27.673 159 108 4 182 336 6 161 3.91e-12 63.9
Msa1024650 MtrunA17_Chr4g0064231 29.375 160 91 4 187 327 63 219 4.24e-12 65.1
Msa1024650 MtrunA17_Chr3g0116141 31.783 129 85 1 197 325 14 139 4.31e-12 63.2
Msa1024650 MtrunA17_Chr3g0116151 31.783 129 85 1 197 325 15 140 4.45e-12 63.2
Msa1024650 MtrunA17_Chr4g0033601 31.469 143 92 3 188 327 5 144 5.01e-12 63.2
Msa1024650 MtrunA17_Chr2g0299781 34.951 103 64 2 45 144 321 423 5.07e-12 67.0
Msa1024650 MtrunA17_Chr3g0135951 34.615 104 65 3 45 145 302 405 5.66e-12 67.0
Msa1024650 MtrunA17_Chr8g0385281 35.644 101 61 4 45 141 161 261 7.41e-12 65.9
Msa1024650 MtrunA17_Chr2g0290751 32.515 163 87 7 181 327 45 200 8.67e-12 63.9
Msa1024650 MtrunA17_Chr1g0167311 37.288 118 61 5 45 151 316 431 9.86e-12 66.2
Msa1024650 MtrunA17_Chr5g0428981 34.815 135 77 5 18 144 923 1054 1.02e-11 66.6
Msa1024650 MtrunA17_Chr5g0402361 27.160 162 115 1 187 348 47 205 1.04e-11 65.5
Msa1024650 MtrunA17_Chr4g0018201 34.815 135 77 5 18 144 919 1050 1.85e-11 65.9
Msa1024650 MtrunA17_Chr1g0167351 36.190 105 62 3 45 145 311 414 2.13e-11 65.1
Msa1024650 MtrunA17_Chr2g0290761 32.515 163 87 7 181 327 45 200 2.86e-11 62.4
Msa1024650 MtrunA17_Chr1g0187581 37.500 104 56 5 45 142 317 417 3.20e-11 64.7
Msa1024650 MtrunA17_Chr7g0225921 30.282 142 95 2 184 324 2 140 3.39e-11 60.8
Msa1024650 MtrunA17_Chr6g0450921 28.662 157 103 3 181 336 22 170 3.99e-11 61.2
Msa1024650 MtrunA17_Chr5g0399911 31.683 101 65 2 45 141 175 275 4.90e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024650 AT3G51850.1 87.539 321 37 1 40 360 211 528 0.0 588
Msa1024650 AT3G51850.2 86.765 272 33 1 40 311 211 479 7.08e-174 493
Msa1024650 AT1G74740.1 70.755 318 90 1 40 357 216 530 4.32e-165 473
Msa1024650 AT5G12480.2 67.183 323 100 3 40 360 122 440 1.55e-159 454
Msa1024650 AT5G19450.2 67.290 321 101 2 41 360 215 532 1.67e-158 455
Msa1024650 AT5G19450.1 67.290 321 101 2 41 360 215 532 1.67e-158 455
Msa1024650 AT1G18890.1 68.553 318 97 1 40 357 220 534 1.97e-158 456
Msa1024650 AT5G12480.1 66.667 327 103 3 36 360 212 534 4.66e-158 454
Msa1024650 AT3G57530.1 61.963 326 118 3 36 360 216 536 2.09e-148 430
Msa1024650 AT2G41860.1 61.059 321 122 1 36 356 207 524 5.31e-142 413
Msa1024650 AT2G41860.2 61.514 317 119 1 40 356 211 524 6.39e-142 413
Msa1024650 AT2G31500.1 57.500 320 130 3 36 352 219 535 1.83e-132 390
Msa1024650 AT3G51850.3 89.231 195 21 0 40 234 211 405 3.58e-125 366
Msa1024650 AT5G12180.1 59.582 287 112 2 41 327 231 513 9.16e-120 356
Msa1024650 AT5G19360.1 58.188 287 116 2 41 327 226 508 2.11e-117 350
Msa1024650 AT4G38230.1 53.952 291 129 2 41 331 38 323 3.58e-110 325
Msa1024650 AT1G35670.1 55.439 285 122 3 43 327 186 465 1.33e-109 329
Msa1024650 AT5G04870.1 55.208 288 124 3 41 328 308 590 2.97e-109 332
Msa1024650 AT3G10660.2 55.556 288 123 3 41 328 344 626 3.35e-109 333
Msa1024650 AT3G10660.1 55.556 288 123 3 41 328 344 626 3.35e-109 333
Msa1024650 AT4G38230.4 53.952 291 129 2 41 331 182 467 8.08e-109 327
Msa1024650 AT4G38230.3 53.952 291 129 2 41 331 182 467 8.08e-109 327
Msa1024650 AT4G09570.1 55.439 285 122 3 43 327 185 464 1.68e-108 327
Msa1024650 AT4G38230.2 53.952 291 129 2 41 331 212 497 2.38e-108 327
Msa1024650 AT4G23650.1 53.287 289 131 2 40 328 235 519 1.63e-107 325
Msa1024650 AT4G04740.4 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G04740.6 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G04740.5 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G04740.3 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G04740.1 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G04740.7 52.365 296 136 3 41 336 227 517 7.11e-107 323
Msa1024650 AT4G21940.1 53.310 287 129 3 41 327 260 541 1.04e-106 324
Msa1024650 AT5G23580.1 55.439 285 122 2 41 325 180 459 1.43e-106 321
Msa1024650 AT4G21940.2 53.310 287 129 3 41 327 260 541 1.46e-106 323
Msa1024650 AT4G04720.2 53.125 288 130 3 41 328 238 520 2.63e-106 322
Msa1024650 AT4G04720.1 53.125 288 130 3 41 328 238 520 2.63e-106 322
Msa1024650 AT2G17290.1 53.310 287 129 3 41 327 243 524 2.91e-106 322
Msa1024650 AT2G17290.2 53.310 287 129 3 41 327 243 524 2.91e-106 322
Msa1024650 AT4G35310.2 52.962 287 130 3 41 327 255 536 2.31e-105 320
Msa1024650 AT4G35310.1 52.962 287 130 3 41 327 255 536 2.31e-105 320
Msa1024650 AT1G50700.1 52.265 287 133 2 41 327 231 513 3.35e-105 319
Msa1024650 AT3G20410.2 49.832 297 145 2 41 337 249 541 4.85e-104 317
Msa1024650 AT3G20410.1 49.832 297 145 2 41 337 249 541 4.85e-104 317
Msa1024650 AT1G50700.2 49.032 310 134 2 41 327 231 539 5.29e-103 314
Msa1024650 AT1G76040.1 50.173 289 137 4 41 328 32 314 1.83e-100 300
Msa1024650 AT1G76040.4 50.173 289 137 4 41 328 32 314 1.83e-100 300
Msa1024650 AT2G38910.1 51.930 285 132 3 41 325 292 571 1.30e-98 304
Msa1024650 AT1G76040.2 49.653 288 140 3 41 328 270 552 1.49e-97 300
Msa1024650 AT4G04740.2 52.963 270 122 3 41 310 227 491 5.77e-97 298
Msa1024650 AT1G61950.1 51.049 286 136 2 41 326 257 538 2.10e-96 297
Msa1024650 AT4G04710.4 48.845 303 136 5 36 327 193 487 3.06e-94 290
Msa1024650 AT4G04710.3 49.658 292 135 4 36 327 179 458 5.48e-94 288
Msa1024650 AT4G04710.2 49.658 292 135 4 36 327 193 472 5.59e-94 289
Msa1024650 AT4G04710.1 48.185 303 136 5 36 327 193 485 7.99e-93 286
Msa1024650 AT3G57530.2 64.103 195 70 0 40 234 220 414 1.34e-92 283
Msa1024650 AT4G21940.3 54.852 237 103 2 41 277 260 492 2.10e-90 280
Msa1024650 AT1G50700.3 53.165 237 108 1 41 277 231 464 5.35e-88 273
Msa1024650 AT4G04695.1 46.643 283 146 3 46 328 195 472 3.70e-83 261
Msa1024650 AT1G76040.3 50.628 239 114 2 41 279 270 504 6.98e-82 258
Msa1024650 AT4G04700.1 45.455 286 151 3 41 326 190 470 1.57e-81 257
Msa1024650 AT2G17890.1 41.554 296 157 5 40 328 267 553 9.42e-76 244
Msa1024650 AT5G66210.1 41.946 298 153 6 40 328 221 507 1.44e-73 237
Msa1024650 AT5G66210.2 41.946 298 153 6 40 328 221 507 1.44e-73 237
Msa1024650 AT5G66210.3 43.580 257 131 4 40 287 221 472 1.29e-67 221
Msa1024650 AT5G66210.5 43.243 259 133 4 36 285 217 470 1.70e-67 220
Msa1024650 AT4G36070.1 37.838 296 168 4 40 328 230 516 3.07e-67 221
Msa1024650 AT2G35890.2 45.495 222 119 1 41 262 290 509 5.36e-67 220
Msa1024650 AT2G35890.1 45.495 222 119 1 41 262 290 509 5.36e-67 220
Msa1024650 AT4G36070.2 37.838 296 168 4 40 328 230 516 5.84e-67 221
Msa1024650 AT5G66210.6 44.388 196 108 1 40 234 221 416 2.09e-54 185
Msa1024650 AT5G66210.4 44.388 196 108 1 40 234 221 416 2.09e-54 185
Msa1024650 AT1G49580.1 32.069 290 185 4 40 324 311 593 1.47e-50 178
Msa1024650 AT3G50530.1 33.113 302 188 6 40 336 309 601 7.27e-50 176
Msa1024650 AT3G50530.2 33.113 302 188 6 40 336 340 632 7.83e-50 177
Msa1024650 AT3G19100.1 32.069 290 184 5 40 324 305 586 1.11e-49 176
Msa1024650 AT2G41140.1 34.483 290 177 6 40 324 284 565 3.29e-49 174
Msa1024650 AT3G56760.1 34.138 290 178 6 40 324 285 566 1.19e-48 172
Msa1024650 AT5G24430.1 30.897 301 191 6 40 335 304 592 8.32e-40 149
Msa1024650 AT2G46700.2 32.776 299 184 6 40 333 123 409 2.82e-39 144
Msa1024650 AT2G46700.3 32.776 299 184 6 40 333 123 409 2.82e-39 144
Msa1024650 AT3G49370.1 33.071 254 151 4 40 284 303 546 3.87e-38 144
Msa1024650 AT2G46700.1 32.776 299 184 6 40 333 304 590 3.95e-38 144
Msa1024650 AT1G12580.1 48.544 103 53 0 40 142 201 303 1.93e-27 113
Msa1024650 AT1G08650.1 43.137 102 57 1 44 144 175 276 6.40e-26 105
Msa1024650 AT1G12680.1 45.545 101 55 0 41 141 255 355 1.02e-23 102
Msa1024650 AT3G43810.2 33.962 159 101 2 177 334 1 156 1.35e-22 94.7
Msa1024650 AT3G04530.1 42.157 102 58 1 44 144 171 272 2.89e-22 95.5
Msa1024650 AT3G22930.1 35.172 145 90 2 181 324 28 169 2.52e-21 90.1
Msa1024650 AT2G27030.3 34.228 149 94 2 177 324 1 146 2.60e-21 90.5
Msa1024650 AT1G66410.1 34.899 149 93 2 177 324 1 146 2.65e-21 89.4
Msa1024650 AT5G37780.1 34.899 149 93 2 177 324 1 146 2.65e-21 89.4
Msa1024650 AT3G56800.1 34.228 149 94 2 177 324 1 146 6.04e-21 88.6
Msa1024650 AT2G41110.1 34.228 149 94 2 177 324 1 146 6.04e-21 88.6
Msa1024650 AT2G27030.1 34.228 149 94 2 177 324 1 146 6.04e-21 88.6
Msa1024650 AT3G43810.1 34.228 149 94 2 177 324 1 146 6.29e-21 88.6
Msa1024650 AT5G21274.1 34.228 149 94 2 177 324 1 146 7.32e-21 88.2
Msa1024650 AT1G08650.2 41.489 94 54 1 44 136 175 268 1.06e-20 90.9
Msa1024650 AT5G39440.1 43.434 99 51 2 46 143 178 272 4.84e-19 88.6
Msa1024650 AT4G14640.1 32.414 145 94 2 181 324 6 147 1.02e-18 82.4
Msa1024650 AT2G41110.2 31.677 161 94 3 177 324 1 158 2.06e-18 82.0
Msa1024650 AT4G30960.1 38.793 116 64 5 46 158 185 296 6.78e-18 85.1
Msa1024650 AT5G37780.2 32.530 166 89 4 177 324 1 161 9.16e-18 80.1
Msa1024650 AT1G30270.3 38.393 112 63 4 46 155 96 203 1.18e-17 84.0
Msa1024650 AT1G30270.1 38.393 112 63 4 46 155 193 300 1.44e-17 84.3
Msa1024650 AT1G30270.2 38.393 112 63 4 46 155 193 300 1.90e-17 84.0
Msa1024650 AT3G50360.1 31.973 147 94 4 181 325 20 162 2.63e-16 76.3
Msa1024650 AT3G01090.2 41.379 116 59 4 46 157 201 311 2.99e-16 80.5
Msa1024650 AT2G45490.1 32.624 141 88 4 5 141 136 273 3.16e-16 78.6
Msa1024650 AT3G01090.3 41.379 116 59 4 46 157 178 288 3.74e-16 80.1
Msa1024650 AT3G01090.1 41.379 116 59 4 46 157 178 288 3.74e-16 80.1
Msa1024650 AT5G37780.3 29.714 175 93 3 177 324 1 172 4.78e-16 75.9
Msa1024650 AT3G59440.1 30.282 142 94 2 188 327 51 189 6.36e-16 75.9
Msa1024650 AT5G10930.1 38.679 106 59 3 45 148 173 274 8.48e-16 78.6
Msa1024650 AT1G66410.2 33.540 161 89 4 177 324 1 156 1.19e-15 74.3
Msa1024650 AT1G18530.1 29.139 151 100 3 184 330 3 150 1.55e-15 73.9
Msa1024650 AT3G29160.3 42.574 101 50 3 46 143 179 274 1.92e-15 77.0
Msa1024650 AT5G37780.4 34.921 126 74 3 202 324 13 133 2.55e-15 72.4
Msa1024650 AT4G14640.2 32.258 124 80 2 202 324 9 129 3.22e-15 72.0
Msa1024650 AT1G62820.1 32.653 147 93 2 179 324 4 145 3.46e-15 72.4
Msa1024650 AT1G24620.1 35.811 148 85 6 185 328 34 175 4.58e-15 73.2
Msa1024650 AT3G29160.1 42.574 101 50 3 46 143 179 274 5.38e-15 76.6
Msa1024650 AT3G29160.2 42.574 101 50 3 46 143 179 274 5.38e-15 76.6
Msa1024650 AT1G01140.3 36.449 107 62 4 45 149 180 282 8.95e-15 75.5
Msa1024650 AT1G01140.1 36.792 106 61 4 46 149 181 282 9.96e-15 75.5
Msa1024650 AT4G37010.2 30.137 146 98 2 181 325 24 166 1.28e-14 71.6
Msa1024650 AT4G37010.1 30.137 146 98 2 181 325 20 162 1.36e-14 71.2
Msa1024650 AT1G01140.2 35.849 106 64 3 46 149 181 284 1.51e-14 75.1
Msa1024650 AT2G41100.7 28.488 172 102 3 171 324 49 217 1.75e-14 73.6
Msa1024650 AT2G41100.6 28.488 172 102 3 171 324 49 217 1.75e-14 73.6
Msa1024650 AT2G41100.3 28.488 172 102 3 171 324 49 217 1.75e-14 73.6
Msa1024650 AT2G25880.2 38.835 103 59 3 44 144 148 248 1.79e-14 72.8
Msa1024650 AT2G26980.5 38.679 106 59 4 45 148 175 276 1.86e-14 74.7
Msa1024650 AT1G76640.1 34.000 150 83 4 184 325 18 159 1.87e-14 70.9
Msa1024650 AT2G26980.1 39.048 105 58 4 46 148 176 276 1.94e-14 74.3
Msa1024650 AT2G26980.3 39.048 105 58 4 46 148 176 276 2.11e-14 74.3
Msa1024650 AT2G25880.1 38.835 103 59 3 44 144 180 280 2.53e-14 73.2
Msa1024650 AT2G25880.4 38.835 103 59 3 44 144 193 293 2.53e-14 73.2
Msa1024650 AT2G26980.4 39.048 105 58 4 46 148 186 286 2.53e-14 74.3
Msa1024650 AT2G41100.4 28.488 172 102 3 171 324 84 252 3.23e-14 73.2
Msa1024650 AT2G41100.4 26.111 180 113 3 177 339 1 177 6.57e-13 69.3
Msa1024650 AT2G41100.1 28.488 172 102 3 171 324 84 252 3.23e-14 73.2
Msa1024650 AT2G41100.1 26.111 180 113 3 177 339 1 177 6.57e-13 69.3
Msa1024650 AT2G25880.3 38.835 103 59 3 44 144 241 341 4.31e-14 73.2
Msa1024650 AT4G32830.1 39.806 103 58 3 44 144 186 286 5.12e-14 72.4
Msa1024650 AT3G43810.4 36.190 105 63 2 221 324 9 110 5.22e-14 68.2
Msa1024650 AT3G43810.3 36.190 105 63 2 221 324 9 110 5.22e-14 68.2
Msa1024650 AT5G25110.1 37.143 105 60 4 46 148 204 304 5.61e-14 73.2
Msa1024650 AT1G48260.2 40.196 102 53 4 45 143 87 183 5.67e-14 72.8
Msa1024650 AT1G48260.4 40.196 102 53 4 45 143 87 183 5.67e-14 72.8
Msa1024650 AT1G48260.3 40.196 102 53 4 45 143 87 183 5.67e-14 72.8
Msa1024650 AT1G48260.5 40.196 102 53 4 45 143 87 183 5.67e-14 72.8
Msa1024650 AT5G45820.1 35.185 108 64 4 46 151 173 276 6.16e-14 73.2
Msa1024650 AT1G48260.1 40.196 102 53 4 45 143 172 268 6.54e-14 72.8
Msa1024650 AT1G66410.4 36.190 105 63 2 221 324 9 110 7.83e-14 67.8
Msa1024650 AT1G66410.3 36.190 105 63 2 221 324 9 110 7.83e-14 67.8
Msa1024650 AT3G63280.2 39.806 103 56 3 42 142 161 259 8.82e-14 72.8
Msa1024650 AT3G63280.3 39.806 103 56 3 42 142 161 259 8.82e-14 72.8
Msa1024650 AT3G63280.1 39.806 103 56 3 42 142 161 259 8.82e-14 72.8
Msa1024650 AT1G12310.1 30.612 147 96 2 179 324 4 145 9.22e-14 68.6
Msa1024650 AT3G63280.4 39.806 103 56 3 42 142 215 313 9.82e-14 72.8
Msa1024650 AT5G45810.1 36.111 108 63 3 41 146 184 287 1.03e-13 72.4
Msa1024650 AT2G43290.1 30.405 148 92 3 188 327 65 209 1.40e-13 69.7
Msa1024650 AT5G37770.1 31.973 147 92 3 186 327 15 158 2.90e-13 67.4
Msa1024650 AT5G37770.2 31.973 147 92 3 186 327 15 158 2.90e-13 67.4
Msa1024650 AT2G25090.1 37.374 99 56 4 46 142 185 279 2.95e-13 71.2
Msa1024650 AT4G18700.1 34.259 108 65 3 41 146 182 285 3.64e-13 70.9
Msa1024650 AT3G23000.1 38.614 101 56 4 46 144 187 283 3.90e-13 70.5
Msa1024650 AT1G45160.2 37.736 106 53 4 45 142 856 956 4.53e-13 71.2
Msa1024650 AT1G05990.1 30.405 148 88 4 188 327 5 145 4.81e-13 66.6
Msa1024650 AT3G22930.2 34.286 105 65 2 181 284 28 129 5.42e-13 65.9
Msa1024650 AT1G45160.1 37.736 106 53 4 45 142 856 956 5.69e-13 70.9
Msa1024650 AT2G30360.1 34.000 100 60 4 44 141 182 277 8.59e-13 69.7
Msa1024650 AT1G66400.1 33.784 148 80 5 186 324 13 151 1.33e-12 65.5
Msa1024650 AT1G03920.1 36.538 104 63 3 45 145 336 439 1.42e-12 69.3
Msa1024650 AT1G03920.3 36.538 104 63 3 45 145 336 439 1.42e-12 69.3
Msa1024650 AT5G01810.1 33.663 101 61 3 46 144 173 269 1.44e-12 68.9
Msa1024650 AT5G01810.2 33.663 101 61 3 46 144 173 269 1.44e-12 68.9
Msa1024650 AT3G25600.1 26.974 152 104 3 183 330 7 155 1.52e-12 65.5
Msa1024650 AT5G01810.3 33.663 101 61 3 46 144 173 269 2.00e-12 68.2
Msa1024650 AT1G03920.2 36.538 104 63 3 45 145 223 326 2.02e-12 68.6
Msa1024650 AT4G40010.1 37.615 109 62 5 37 141 154 260 2.24e-12 67.8
Msa1024650 AT4G14640.3 31.481 108 70 2 181 287 6 110 2.32e-12 63.9
Msa1024650 AT5G09890.1 39.423 104 58 3 45 144 305 407 2.58e-12 68.2
Msa1024650 AT5G09890.2 39.423 104 58 3 45 144 305 407 2.58e-12 68.2
Msa1024650 AT4G03290.1 30.137 146 93 3 188 327 5 147 2.63e-12 64.7
Msa1024650 AT3G53930.1 31.707 123 77 2 44 165 179 295 3.07e-12 68.2
Msa1024650 AT3G53930.2 31.707 123 77 2 44 165 179 295 3.15e-12 68.2
Msa1024650 AT5G62310.1 39.362 94 47 3 44 132 943 1031 3.28e-12 68.6
Msa1024650 AT1G64480.4 33.557 149 78 7 185 319 35 176 3.67e-12 65.1
Msa1024650 AT1G50240.3 35.577 104 62 2 44 146 162 261 3.92e-12 68.2
Msa1024650 AT1G50240.2 35.577 104 62 2 44 146 162 261 3.92e-12 68.2
Msa1024650 AT1G64480.2 33.557 149 78 7 185 319 35 176 5.40e-12 65.1
Msa1024650 AT1G64480.3 33.557 149 78 7 185 319 35 176 5.40e-12 65.1
Msa1024650 AT1G64480.1 33.557 149 78 7 185 319 35 176 5.40e-12 65.1
Msa1024650 AT5G08590.1 36.449 107 63 5 45 146 160 266 7.77e-12 66.2
Msa1024650 AT4G33080.1 37.500 104 61 3 45 144 302 405 8.51e-12 66.6
Msa1024650 AT3G17850.1 37.755 98 51 3 45 137 1072 1164 8.66e-12 67.4
Msa1024650 AT4G33080.2 37.500 104 61 3 45 144 302 405 8.75e-12 66.6
Msa1024650 AT5G08590.2 36.449 107 63 5 45 146 84 190 9.78e-12 65.1
Msa1024650 AT2G15680.1 30.405 148 95 3 181 326 43 184 1.03e-11 63.5
Msa1024650 AT1G53570.7 36.697 109 65 3 46 152 375 481 1.04e-11 66.6
Msa1024650 AT1G53570.6 36.697 109 65 3 46 152 375 481 1.04e-11 66.6
Msa1024650 AT3G03000.1 30.000 150 100 3 181 328 13 159 1.13e-11 63.2
Msa1024650 AT1G48490.3 36.449 107 55 4 45 143 1012 1113 1.17e-11 66.6
Msa1024650 AT1G48490.2 36.449 107 55 4 45 143 1012 1113 1.17e-11 66.6
Msa1024650 AT1G48490.1 36.449 107 55 4 45 143 1012 1113 1.17e-11 66.6
Msa1024650 AT1G48490.4 36.449 107 55 4 45 143 1013 1114 1.17e-11 66.6
Msa1024650 AT1G76650.1 30.986 142 87 3 188 325 43 177 1.23e-11 63.2
Msa1024650 AT1G76650.3 30.986 142 87 3 188 325 43 177 1.23e-11 63.2
Msa1024650 AT3G44200.2 38.835 103 57 3 42 142 165 263 1.29e-11 66.6
Msa1024650 AT3G44200.1 38.835 103 57 3 42 142 165 263 1.29e-11 66.6
Msa1024650 AT2G41090.1 29.801 151 95 4 177 324 1 143 1.35e-11 63.5
Msa1024650 AT1G53570.2 36.697 109 65 3 46 152 375 481 1.98e-11 65.9
Msa1024650 AT1G53570.3 36.697 109 65 3 46 152 375 481 1.98e-11 65.9
Msa1024650 AT1G53570.1 36.697 109 65 3 46 152 375 481 2.02e-11 65.9
Msa1024650 AT1G53570.4 36.697 109 65 3 46 152 375 481 2.04e-11 65.9
Msa1024650 AT4G12860.1 30.612 147 88 4 188 327 5 144 2.06e-11 62.0
Msa1024650 AT1G53570.5 36.697 109 65 3 46 152 349 455 2.56e-11 65.5
Msa1024650 AT1G18210.2 29.577 142 86 4 187 324 22 153 3.37e-11 62.0
Msa1024650 AT1G18210.1 29.577 142 86 4 187 324 22 153 3.37e-11 62.0
Msa1024650 AT3G61960.1 29.221 154 99 4 33 176 157 310 3.39e-11 65.1
Msa1024650 AT4G14580.1 34.653 101 60 4 46 144 184 280 3.46e-11 64.7
Msa1024650 AT2G20050.2 33.333 120 69 4 33 145 924 1039 3.73e-11 65.1
Msa1024650 AT2G20050.1 33.333 120 69 4 33 145 927 1042 3.83e-11 65.1
Msa1024650 AT2G38490.1 35.922 103 60 4 44 144 187 285 3.93e-11 64.3
Msa1024650 AT1G30640.3 34.746 118 65 4 45 151 231 347 4.14e-11 64.7
Msa1024650 AT3G61960.2 31.405 121 80 3 33 150 157 277 4.15e-11 64.7
Msa1024650 AT1G30640.2 34.746 118 65 4 45 151 324 440 5.08e-11 64.3
Msa1024650 AT1G30640.1 34.746 118 65 4 45 151 324 440 5.08e-11 64.3
Msa1024650 AT5G63650.1 35.514 107 64 5 45 146 160 266 5.76e-11 63.5
Msa1024650 AT1G32250.1 27.273 154 102 4 181 327 9 159 8.05e-11 60.5
Msa1024650 AT3G23310.1 36.893 103 56 5 45 141 322 421 8.21e-11 63.9
Msa1024650 AT4G14350.3 36.449 107 59 5 45 145 319 422 9.02e-11 63.5
Msa1024650 AT4G14350.2 36.449 107 59 5 45 145 319 422 9.30e-11 63.5
Msa1024650 AT4G14350.1 36.449 107 59 5 45 145 319 422 9.30e-11 63.5
Msa1024650 AT4G14350.4 36.449 107 59 5 45 145 319 422 9.30e-11 63.5

Find 140 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTACTCTACTAATATTT+TGG 0.124927 7_1:-54249143 Msa1024650:three_prime_UTR
GCTTCTTTGTGATGATTATT+TGG 0.154592 7_1:-54249438 Msa1024650:three_prime_UTR
CCAGCCTTCTCTTGTGGTTT+GGG 0.188093 7_1:-54249265 Msa1024650:three_prime_UTR
CCTTGTCTGTGTCTACTTCT+TGG 0.208393 7_1:+54249759 None:intergenic
CCATTTCCCTTCATTTAAAA+AGG 0.223413 7_1:-54249922 Msa1024650:CDS
AACAAAGGGTGTGTATATTT+TGG 0.228520 7_1:+54249354 None:intergenic
ATGTACTTGTTCTTGAACTA+TGG 0.229289 7_1:-54249050 Msa1024650:three_prime_UTR
CGGTGGTTTCAGTTCGTTTA+GGG 0.234830 7_1:+54254464 None:intergenic
AGAAGCCAAGTCCAGGATTT+AGG 0.243770 7_1:+54249455 None:intergenic
CAAGAACAAGTACATCTTAA+AGG 0.245530 7_1:+54249058 None:intergenic
TAATTATTACCAGCCCAAAA+TGG 0.248270 7_1:+54251777 None:intergenic
TTGGAGCCTTCTTAGCATTC+TGG 0.258928 7_1:+54250582 None:intergenic
GCACTCCATATATCTATTTC+AGG 0.266017 7_1:+54251837 None:intergenic
TTTAGCACTTTCAGAAATAC+TGG 0.274916 7_1:+54251117 None:intergenic
TCTCCGATCCACCTCCGATA+TGG 0.279273 7_1:-54254557 Msa1024650:exon
TGTTGGAAGTCCATATTATA+TGG 0.284645 7_1:-54251889 Msa1024650:CDS
CTTGTCTTGCAGAGCATCCT+TGG 0.293697 7_1:-54250607 Msa1024650:intron
TCCAGCCTTCTCTTGTGGTT+TGG 0.301838 7_1:-54249266 Msa1024650:three_prime_UTR
GATGTCTTCAACTTCTTCAT+TGG 0.314100 7_1:+54250379 None:intergenic
ATTCCCATCCTTGTCAAAAT+AGG 0.316923 7_1:+54249865 None:intergenic
GGAGAAGTGGTGGTGGTGGT+TGG 0.344425 7_1:+54254575 None:intergenic
ACCTCTGGAGCCATATAATA+TGG 0.352657 7_1:+54251879 None:intergenic
GCGGTGGTTTCAGTTCGTTT+AGG 0.361159 7_1:+54254463 None:intergenic
TTGGCCGTTAATCGAAGCTT+AGG 0.367905 7_1:+54251064 None:intergenic
AAAGATGGTTCTTTAAACTT+AGG 0.374121 7_1:-54249542 Msa1024650:CDS
TTGTATTCTGTACTCAGATT+TGG 0.376613 7_1:-54249178 Msa1024650:three_prime_UTR
AATTATTACCAGCCCAAAAT+GGG 0.377362 7_1:+54251778 None:intergenic
GAACATACCAAGCACTTGTT+TGG 0.379659 7_1:+54251045 None:intergenic
TATTTGGTTCCTCGTTAGAT+AGG 0.382748 7_1:-54249422 Msa1024650:three_prime_UTR
TTCAGCGTTACTAGGGGTTC+AGG 0.384867 7_1:-54248890 Msa1024650:three_prime_UTR
ATGGACCTGAAATAGATATA+TGG 0.387032 7_1:-54251842 Msa1024650:CDS
AGGCTGGATGTTAAAATGAT+TGG 0.392490 7_1:+54249281 None:intergenic
GAGAAGTGGTGGTGGTGGTT+GGG 0.393163 7_1:+54254576 None:intergenic
CTTCTTACGCACTTAAATAG+TGG 0.397435 7_1:+54248984 None:intergenic
AAGGCACTCCGTAGCTCTTC+TGG 0.398174 7_1:+54249830 None:intergenic
AGACCCTAAGCTTCGATTAA+CGG 0.408641 7_1:-54251068 Msa1024650:CDS
GTTTATTGAAGCTGTGAGTA+TGG 0.409785 7_1:-54250243 Msa1024650:intron
TTTGTGGCTATGATGAAAAC+TGG 0.410674 7_1:-54249635 Msa1024650:CDS
CTCCGATCCACCTCCGATAT+GGG 0.417159 7_1:-54254556 Msa1024650:exon
CAAAGAGATGTTCAAGAAGA+TGG 0.417275 7_1:-54250357 Msa1024650:CDS
ACATCACCAAGAGGAACATT+TGG 0.419493 7_1:+54250563 None:intergenic
ACATTCACTTTCTAGGGTTA+GGG 0.420258 7_1:-54254620 None:intergenic
TCCATTGAAGAACTAAAAGT+TGG 0.425574 7_1:-54250311 Msa1024650:CDS
TGACATCAGGTAGATAATAA+TGG 0.428167 7_1:-54249977 Msa1024650:intron
GATTCAAAAGAAAAGCCCTT+AGG 0.428179 7_1:-54250502 Msa1024650:CDS
AGCTTAAAGTTAATGAAAGA+TGG 0.438081 7_1:-54249557 Msa1024650:CDS
TAGTTCCGCTTGAGCACCTC+TGG 0.438830 7_1:+54251864 None:intergenic
GAGGTGCTCAAGCGGAACTA+TGG 0.441551 7_1:-54251861 Msa1024650:CDS
AATCAGCTATGATGAATTTG+TGG 0.443183 7_1:-54249651 Msa1024650:CDS
CGGATTGGAGAAAGGCTTCT+CGG 0.447585 7_1:-54249610 Msa1024650:CDS
TCTTCGCGTGCGACGGCGGC+CGG 0.448262 7_1:+54254517 None:intergenic
TTCGTGACTCAGACAACAAC+AGG 0.452191 7_1:+54249389 None:intergenic
AGAGCTACGGAGTGCCTTGA+TGG 0.454358 7_1:-54249825 Msa1024650:CDS
TGGAATACACAGCCATTCTC+TGG 0.460129 7_1:+54249120 None:intergenic
GATCGGAGAAGTGGTGGTGG+TGG 0.463884 7_1:+54254571 None:intergenic
TCAGACAACAACAGGTGAAA+AGG 0.466563 7_1:+54249397 None:intergenic
GAGAAATTCTCAGAAATTGT+TGG 0.468312 7_1:-54251906 Msa1024650:CDS
ATTCAAAAGAAAAGCCCTTA+GGG 0.469497 7_1:-54250501 Msa1024650:intron
TAAACAGCAATAAGATATCA+TGG 0.470983 7_1:+54249100 None:intergenic
CAAGTTGAGACTGATGGTTT+CGG 0.475139 7_1:+54250285 None:intergenic
GAGGGCTTATAGATTTCAAA+CGG 0.476470 7_1:-54251150 Msa1024650:CDS
TCAGGTAGATAATAATGGTA+AGG 0.478694 7_1:-54249972 Msa1024650:intron
GTGGTCGTGGTTGGAGAAAG+AGG 0.489793 7_1:+54254486 None:intergenic
GTAATAGTCCTCCTAAATCC+TGG 0.492282 7_1:-54249466 Msa1024650:three_prime_UTR
TCGTTTAGGGTGGTCGTGGT+TGG 0.494871 7_1:+54254477 None:intergenic
TAACATCCAGCCTTCTCTTG+TGG 0.496658 7_1:-54249271 Msa1024650:three_prime_UTR
CGGAGTGCCTTGATGGAAGA+TGG 0.499018 7_1:-54249818 Msa1024650:CDS
TCTGCAGCAGTTACCCATAT+CGG 0.500299 7_1:+54254543 None:intergenic
GTGGATCGGAGAAGTGGTGG+TGG 0.502785 7_1:+54254568 None:intergenic
GTTGCACAAGCTATTCTTCG+AGG 0.503971 7_1:-54251169 Msa1024650:CDS
GAAATAGATATATGGAGTGC+AGG 0.506175 7_1:-54251834 Msa1024650:CDS
TAGATTTCAAACGGGAACCT+TGG 0.507168 7_1:-54251141 Msa1024650:CDS
ATCTTATTGCTGTTTACTGT+AGG 0.508233 7_1:-54249093 Msa1024650:three_prime_UTR
TGATGAAAACTGGAACGGAT+TGG 0.508931 7_1:-54249625 Msa1024650:CDS
GTCCTCCTAAATCCTGGACT+TGG 0.511360 7_1:-54249460 Msa1024650:three_prime_UTR
ATTTGGTTCCTCGTTAGATA+GGG 0.511673 7_1:-54249421 Msa1024650:three_prime_UTR
GTTAATCGAAGCTTAGGGTC+TGG 0.511744 7_1:+54251070 None:intergenic
CAGTTCGTTTAGGGTGGTCG+TGG 0.513335 7_1:+54254473 None:intergenic
GGTAAGGGAACACTAGATTA+CGG 0.514371 7_1:-54249956 Msa1024650:CDS
TTGGTGATGTTGTCAAGTCA+AGG 0.515370 7_1:-54250550 Msa1024650:CDS
TGGCCGTTAATCGAAGCTTA+GGG 0.516009 7_1:+54251065 None:intergenic
GGCCAAAATATTAGTAGAGT+AGG 0.517625 7_1:+54249141 None:intergenic
ATCACAAAGAAGCCAAGTCC+AGG 0.523189 7_1:+54249448 None:intergenic
AACTGGAACGGATTGGAGAA+AGG 0.523785 7_1:-54249618 Msa1024650:CDS
TTCTTAGCATTCTGGAGCCA+AGG 0.524983 7_1:+54250590 None:intergenic
GACATCTTCGCGTGCGACGG+CGG 0.528557 7_1:+54254513 None:intergenic
GGGTAACTGCTGCAGATCTC+CGG 0.530101 7_1:-54254536 Msa1024650:CDS
TTGGCTCCAGAATGCTAAGA+AGG 0.530192 7_1:-54250588 Msa1024650:CDS
AAGGCTCCAAATGTTCCTCT+TGG 0.531788 7_1:-54250569 Msa1024650:CDS
AAGTCTTGTTAAGCAAATGT+TGG 0.532743 7_1:-54251095 Msa1024650:CDS
AGGAGGACTATTACACTATG+TGG 0.534144 7_1:+54249475 None:intergenic
AGGGCTTATAGATTTCAAAC+GGG 0.537352 7_1:-54251149 Msa1024650:CDS
TACCCATATCGGAGGTGGAT+CGG 0.540468 7_1:+54254554 None:intergenic
TTTGACATCTTCGCGTGCGA+CGG 0.541557 7_1:+54254510 None:intergenic
GCCAAAATATTAGTAGAGTA+GGG 0.550375 7_1:+54249142 None:intergenic
GCAGTTACCCATATCGGAGG+TGG 0.555351 7_1:+54254549 None:intergenic
ATCAGTTCCATCTTCCATCA+AGG 0.557877 7_1:+54249811 None:intergenic
ATGTCACACCATTGGCTCCA+AGG 0.559418 7_1:+54249312 None:intergenic
CCCAAACCACAAGAGAAGGC+TGG 0.563657 7_1:+54249265 None:intergenic
CAGGTAGATAATAATGGTAA+GGG 0.565450 7_1:-54249971 Msa1024650:CDS
TTGCACAAGCTATTCTTCGA+GGG 0.566710 7_1:-54251168 Msa1024650:CDS
TTGTGTGAAACACGGTGCCT+TGG 0.566914 7_1:-54249329 Msa1024650:three_prime_UTR
ACTCAGCAAGTTGAGACTGA+TGG 0.583406 7_1:+54250279 None:intergenic
GAGGTGGATCGGAGAAGTGG+TGG 0.585848 7_1:+54254565 None:intergenic
TTAACGGCCAAACAAGTGCT+TGG 0.587749 7_1:-54251052 Msa1024650:intron
TGTTTCACACAAGTAACAAA+GGG 0.587965 7_1:+54249340 None:intergenic
ATCCTTGTCAAAATAGGAGA+AGG 0.589327 7_1:+54249871 None:intergenic
CTTTCAGAAATACTGGGCCA+AGG 0.590305 7_1:+54251124 None:intergenic
ACACGGTGCCTTGGAGCCAA+TGG 0.592902 7_1:-54249320 Msa1024650:three_prime_UTR
AATCATACATGTCACACCAT+TGG 0.594904 7_1:+54249304 None:intergenic
TGGTTTCAGTTCGTTTAGGG+TGG 0.597479 7_1:+54254467 None:intergenic
GGCGAGGACGGTGACCGGAG+GGG 0.600003 7_1:+54254429 None:intergenic
CATTCCCAAACCACAAGAGA+AGG 0.601589 7_1:+54249261 None:intergenic
TTAGCACTTTCAGAAATACT+GGG 0.602813 7_1:+54251118 None:intergenic
ATATTGAACCAGAAGAGCTA+CGG 0.603133 7_1:-54249838 Msa1024650:CDS
GCAGTCTGATTGTTTATCCG+AGG 0.605363 7_1:-54249218 Msa1024650:three_prime_UTR
ATTATTACCAGCCCAAAATG+GGG 0.612575 7_1:+54251779 None:intergenic
AGCCAAGTCCAGGATTTAGG+AGG 0.615105 7_1:+54249458 None:intergenic
ATGCAATGAACCAACCCTAA+GGG 0.616435 7_1:+54250487 None:intergenic
TCCATATTATATGGCTCCAG+AGG 0.617671 7_1:-54251880 Msa1024650:CDS
TGGCTCCAGAGGTGCTCAAG+CGG 0.618705 7_1:-54251869 Msa1024650:CDS
TCGGAGGTGGATCGGAGAAG+TGG 0.620386 7_1:+54254562 None:intergenic
CCTAATGCAGAATCTGAGCA+AGG 0.620432 7_1:-54251193 Msa1024650:intron
AAGATGGATACTGATAATGA+TGG 0.624647 7_1:-54250341 Msa1024650:CDS
GTGTTTCACACAAGTAACAA+AGG 0.628224 7_1:+54249339 None:intergenic
GCTTCTCGGCATTACTCACG+TGG 0.638037 7_1:-54249596 Msa1024650:CDS
ACTACAAGATATTCACACCT+CGG 0.648369 7_1:+54249201 None:intergenic
CCAAGAAGTAGACACAGACA+AGG 0.657425 7_1:-54249759 Msa1024650:intron
GGCTATGATGAAAACTGGAA+CGG 0.659519 7_1:-54249630 Msa1024650:CDS
TTTGTTACTTGTGTGAAACA+CGG 0.663832 7_1:-54249337 Msa1024650:three_prime_UTR
TGTCTGAGTCACGAAGGAAG+AGG 0.665369 7_1:-54249381 Msa1024650:three_prime_UTR
ATACTCTATATCTTATTGTG+CGG 0.673830 7_1:-54251807 Msa1024650:CDS
AAATGACGAGCATCTTCACA+AGG 0.673979 7_1:-54249894 Msa1024650:CDS
GACTTGACAACATCACCAAG+AGG 0.675943 7_1:+54250554 None:intergenic
ATTGAATATAAGCAAACACT+CGG 0.677281 7_1:+54249506 None:intergenic
GCAGCAGTTACCCATATCGG+AGG 0.688022 7_1:+54254546 None:intergenic
TTATTACCAGCCCAAAATGG+GGG 0.698731 7_1:+54251780 None:intergenic
TGTTGTTGTCTGAGTCACGA+AGG 0.713557 7_1:-54249387 Msa1024650:three_prime_UTR
GAAAAGGACCCTATCTAACG+AGG 0.725553 7_1:+54249413 None:intergenic
CTTCTCGGCATTACTCACGT+GGG 0.737202 7_1:-54249595 Msa1024650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATCTTATAAAACTT+GGG - chr7_1:54250450-54250469 Msa1024650:intron 10.0%
!! CAAATAATTAAAATAGTAAT+TGG + chr7_1:54251048-54251067 None:intergenic 10.0%
!!! TTAATTTAGCTAATCTTTTT+AGG - chr7_1:54249691-54249710 Msa1024650:intron 15.0%
!!! TAATTTAGCTAATCTTTTTA+GGG - chr7_1:54249692-54249711 Msa1024650:intron 15.0%
!! TATAAACAAAATATTATCAC+AGG + chr7_1:54250258-54250277 None:intergenic 15.0%
!!! CAAGTTTTATAAGATTTATT+TGG + chr7_1:54250451-54250470 None:intergenic 15.0%
!! CAAATAAATCTTATAAAACT+TGG - chr7_1:54250449-54250468 Msa1024650:intron 15.0%
!!! TTTTTTTTTTCAAAATCTTC+TGG + chr7_1:54250977-54250996 None:intergenic 15.0%
!!! AAGATTTACTATTTTAATAC+TGG - chr7_1:54251140-54251159 Msa1024650:CDS 15.0%
!! AAAAAAAATACAGAAAACAT+GGG + chr7_1:54251986-54252005 None:intergenic 15.0%
!! AAAAAAAAATACAGAAAACA+TGG + chr7_1:54251987-54252006 None:intergenic 15.0%
!! TAATAATTAGAAATCAGTTA+TGG - chr7_1:54252808-54252827 Msa1024650:intron 15.0%
!!! AAGTGCATTTTAATTTATAT+CGG - chr7_1:54253048-54253067 Msa1024650:intron 15.0%
!!! TGAAGATATATTTACACTTT+TGG - chr7_1:54249834-54249853 Msa1024650:CDS 20.0%
!!! AAAAACTATCTTATTTGCTT+GGG - chr7_1:54249896-54249915 Msa1024650:CDS 20.0%
!! ATCAAATTACATCACAAATT+AGG + chr7_1:54250210-54250229 None:intergenic 20.0%
!! AAATTAGTACATTAACAGTA+TGG - chr7_1:54250327-54250346 Msa1024650:CDS 20.0%
!! TTATTTGTAAGAGAAGAAAT+TGG - chr7_1:54250771-54250790 Msa1024650:intron 20.0%
!! AAATTGAAATGCTGAAAAAA+TGG + chr7_1:54250865-54250884 None:intergenic 20.0%
!! AAAAAAACATAAAGCTAATG+TGG - chr7_1:54251001-54251020 Msa1024650:intron 20.0%
!! AAAAAACATAAAGCTAATGT+GGG - chr7_1:54251002-54251021 Msa1024650:intron 20.0%
!! TTTAATTATTTGAACCCAAT+AGG - chr7_1:54251056-54251075 Msa1024650:CDS 20.0%
!! GTAGTTAATACCAAAATAAT+CGG + chr7_1:54251082-54251101 None:intergenic 20.0%
!!! TACTATTTTAATACTGGAAA+TGG - chr7_1:54251146-54251165 Msa1024650:CDS 20.0%
!!! TTTTTTGAATATTATGACCA+TGG + chr7_1:54252484-54252503 None:intergenic 20.0%
!! TAAAGAAAACAAAGATACAA+AGG + chr7_1:54252713-54252732 None:intergenic 20.0%
!! AAGAACTTAAGAACAATTTA+CGG + chr7_1:54253472-54253491 None:intergenic 20.0%
!!! GGATAGGATAAAGTTTTATA+TGG - chr7_1:54249781-54249800 Msa1024650:CDS 25.0%
!!! ATTTACACTTTTGGAGATTT+AGG - chr7_1:54249843-54249862 Msa1024650:CDS 25.0%
!! CAAGCAAATAAGATAGTTTT+TGG + chr7_1:54249897-54249916 None:intergenic 25.0%
!! CAAAAACTATCTTATTTGCT+TGG - chr7_1:54249895-54249914 Msa1024650:CDS 25.0%
!!! TTTAGTTTGTTAAGTGTCAA+AGG + chr7_1:54250095-54250114 None:intergenic 25.0%
! TACATTAGGATTATTTGTAG+TGG - chr7_1:54250151-54250170 Msa1024650:intron 25.0%
! ACATTAGGATTATTTGTAGT+GGG - chr7_1:54250152-54250171 Msa1024650:intron 25.0%
! ATACAACATCAACTTATAAG+GGG + chr7_1:54250483-54250502 None:intergenic 25.0%
! CATACAACATCAACTTATAA+GGG + chr7_1:54250484-54250503 None:intergenic 25.0%
!!! TATTTTGGTATTAACTACTG+AGG - chr7_1:54251084-54251103 Msa1024650:CDS 25.0%
! AAATAGTAAATCTTGTGTAG+TGG + chr7_1:54251134-54251153 None:intergenic 25.0%
! TTGATATACAGTATAGTTTC+TGG + chr7_1:54251301-54251320 None:intergenic 25.0%
! TAATACAATGTTCTATCAGA+TGG + chr7_1:54251462-54251481 None:intergenic 25.0%
!! TATTTTCCATAATTGTCTTG+TGG - chr7_1:54251545-54251564 Msa1024650:intron 25.0%
!! ATTTTCCATAATTGTCTTGT+GGG - chr7_1:54251546-54251565 Msa1024650:intron 25.0%
! ATACTCTATATCTTATTGTG+CGG - chr7_1:54251688-54251707 Msa1024650:intron 25.0%
! ATAATTATTAAGACCCAGAA+AGG + chr7_1:54252605-54252624 None:intergenic 25.0%
! AACAAAGATACAAAGGAAAA+AGG + chr7_1:54252706-54252725 None:intergenic 25.0%
! TTAATATGAAAACAGAGCAT+AGG + chr7_1:54253404-54253423 None:intergenic 25.0%
!! TTTTTCTTTACATGTAGTCA+CGG - chr7_1:54253773-54253792 Msa1024650:intron 25.0%
! AGTTGTTCAAGAATTTAAGA+TGG + chr7_1:54253812-54253831 None:intergenic 25.0%
! TTAAATTCTTGAACAACTAC+AGG - chr7_1:54253814-54253833 Msa1024650:intron 25.0%
! AGCTTAAAGTTAATGAAAGA+TGG - chr7_1:54253938-54253957 Msa1024650:intron 25.0%
! AAAGATGGTTCTTTAAACTT+AGG - chr7_1:54253953-54253972 Msa1024650:intron 25.0%
! ATTGAATATAAGCAAACACT+CGG + chr7_1:54253992-54254011 None:intergenic 25.0%
! TAAACAGCAATAAGATATCA+TGG + chr7_1:54254398-54254417 None:intergenic 25.0%
! TATTCTTTCTTTGTTCTCTT+GGG + chr7_1:54254542-54254561 None:intergenic 25.0%
! TTGAATTTGCAAAATAAACC+GGG + chr7_1:54254565-54254584 None:intergenic 25.0%
! GTTGAATTTGCAAAATAAAC+CGG + chr7_1:54254566-54254585 None:intergenic 25.0%
TAATGCTGTTCATCTTGTTA+TGG - chr7_1:54249337-54249356 Msa1024650:three_prime_UTR 30.0%
! TTTCTTGTTTGCGAATAAGA+AGG - chr7_1:54249511-54249530 Msa1024650:three_prime_UTR 30.0%
!! CCAAAATCAATAGCTTTAAG+CGG + chr7_1:54249545-54249564 None:intergenic 30.0%
!!! CGCTTAAAGCTATTGATTTT+GGG - chr7_1:54249543-54249562 Msa1024650:CDS 30.0%
TATATTCTTTAAGCCAGGTA+TGG - chr7_1:54249571-54249590 Msa1024650:CDS 30.0%
TAATTAGTGCTGCAATTAGT+TGG - chr7_1:54249743-54249762 Msa1024650:intron 30.0%
! TCTAGATTGTTCAAGGTTTT+TGG - chr7_1:54249809-54249828 Msa1024650:CDS 30.0%
GTGATGTAATTTGATGTGTT+AGG - chr7_1:54250215-54250234 Msa1024650:intron 30.0%
TACCATTAGCAATGTAGAAA+CGG + chr7_1:54250424-54250443 None:intergenic 30.0%
CCATACAACATCAACTTATA+AGG + chr7_1:54250485-54250504 None:intergenic 30.0%
!! CCTTATAAGTTGATGTTGTA+TGG - chr7_1:54250482-54250501 Msa1024650:intron 30.0%
! TCTGATATCGTCTTAGATTT+TGG + chr7_1:54250519-54250538 None:intergenic 30.0%
TATTACAGATAGTCCAATAG+CGG + chr7_1:54250561-54250580 None:intergenic 30.0%
! AATTGGTTTCTATGACTAGT+TGG - chr7_1:54250788-54250807 Msa1024650:intron 30.0%
! ATGCTGAAAAAATGGTGTTA+TGG + chr7_1:54250857-54250876 None:intergenic 30.0%
AGTATACAGTGAAAACAACA+GGG + chr7_1:54250954-54250973 None:intergenic 30.0%
TTAATACTGGAAATGGTTCA+AGG - chr7_1:54251153-54251172 Msa1024650:CDS 30.0%
AAAATGAAACCAACAAAGCA+AGG - chr7_1:54251183-54251202 Msa1024650:CDS 30.0%
TGGAAAGGTTCTTCAATTAA+GGG + chr7_1:54251281-54251300 None:intergenic 30.0%
! ATACAGTATAGTTTCTGGAA+AGG + chr7_1:54251296-54251315 None:intergenic 30.0%
GAAAACAAGCTTACATTAGA+GGG + chr7_1:54251355-54251374 None:intergenic 30.0%
AGAAAACAAGCTTACATTAG+AGG + chr7_1:54251356-54251375 None:intergenic 30.0%
ATGAAAAGGGATTTATGCAT+CGG + chr7_1:54251507-54251526 None:intergenic 30.0%
AATCCTGTAAGCAATGAAAA+GGG + chr7_1:54251520-54251539 None:intergenic 30.0%
AAATCCTGTAAGCAATGAAA+AGG + chr7_1:54251521-54251540 None:intergenic 30.0%
TATTACCCACAAGACAATTA+TGG + chr7_1:54251554-54251573 None:intergenic 30.0%
TGGGTAATATTCAAATTTCC+AGG - chr7_1:54251565-54251584 Msa1024650:intron 30.0%
GAGAAATTCTCAGAAATTGT+TGG - chr7_1:54251589-54251608 Msa1024650:intron 30.0%
TGTTGGAAGTCCATATTATA+TGG - chr7_1:54251606-54251625 Msa1024650:intron 30.0%
ATGGACCTGAAATAGATATA+TGG - chr7_1:54251653-54251672 Msa1024650:intron 30.0%
AATTATTACCAGCCCAAAAT+GGG + chr7_1:54251720-54251739 None:intergenic 30.0%
TAATTATTACCAGCCCAAAA+TGG + chr7_1:54251721-54251740 None:intergenic 30.0%
! AACTTTTCAGATAAACTACG+TGG + chr7_1:54252060-54252079 None:intergenic 30.0%
TTAGCACTTTCAGAAATACT+GGG + chr7_1:54252380-54252399 None:intergenic 30.0%
TTTAGCACTTTCAGAAATAC+TGG + chr7_1:54252381-54252400 None:intergenic 30.0%
!! AAGTCTTGTTAAGCAAATGT+TGG - chr7_1:54252400-54252419 Msa1024650:intron 30.0%
CTGAAATAATTTAGTGATGC+TGG - chr7_1:54252530-54252549 Msa1024650:intron 30.0%
CAGTTATGGTGATTATGTTA+AGG - chr7_1:54252822-54252841 Msa1024650:intron 30.0%
TAAGGACTTATCAGAAGAAA+TGG - chr7_1:54252840-54252859 Msa1024650:intron 30.0%
ATTCAAAAGAAAAGCCCTTA+GGG - chr7_1:54252994-54253013 Msa1024650:intron 30.0%
! AAGATGGATACTGATAATGA+TGG - chr7_1:54253154-54253173 Msa1024650:intron 30.0%
TCCATTGAAGAACTAAAAGT+TGG - chr7_1:54253184-54253203 Msa1024650:intron 30.0%
!!! TCCAACTTTTAGTTCTTCAA+TGG + chr7_1:54253188-54253207 None:intergenic 30.0%
ACAATAAGCTAGAAGAAAAG+GGG + chr7_1:54253286-54253305 None:intergenic 30.0%
CACAATAAGCTAGAAGAAAA+GGG + chr7_1:54253287-54253306 None:intergenic 30.0%
ACACAATAAGCTAGAAGAAA+AGG + chr7_1:54253288-54253307 None:intergenic 30.0%
! TTTTCAAACCATTGTGTGAA+TGG - chr7_1:54253424-54253443 Msa1024650:intron 30.0%
ACTTAAGAACAATTTACGGT+TGG + chr7_1:54253468-54253487 None:intergenic 30.0%
TGACATCAGGTAGATAATAA+TGG - chr7_1:54253518-54253537 Msa1024650:intron 30.0%
TCAGGTAGATAATAATGGTA+AGG - chr7_1:54253523-54253542 Msa1024650:intron 30.0%
CAGGTAGATAATAATGGTAA+GGG - chr7_1:54253524-54253543 Msa1024650:intron 30.0%
! CCTTTTTAAATGAAGGGAAA+TGG + chr7_1:54253576-54253595 None:intergenic 30.0%
CCATTTCCCTTCATTTAAAA+AGG - chr7_1:54253573-54253592 Msa1024650:intron 30.0%
TTCCCTTCATTTAAAAAGGA+TGG - chr7_1:54253577-54253596 Msa1024650:intron 30.0%
! TGCCATCCTTTTTAAATGAA+GGG + chr7_1:54253582-54253601 None:intergenic 30.0%
! TTGCCATCCTTTTTAAATGA+AGG + chr7_1:54253583-54253602 None:intergenic 30.0%
AATCAGCTATGATGAATTTG+TGG - chr7_1:54253844-54253863 Msa1024650:intron 30.0%
GCTTCTTTGTGATGATTATT+TGG - chr7_1:54254057-54254076 Msa1024650:intron 30.0%
!! AACAAAGGGTGTGTATATTT+TGG + chr7_1:54254144-54254163 None:intergenic 30.0%
TGTTTCACACAAGTAACAAA+GGG + chr7_1:54254158-54254177 None:intergenic 30.0%
! TTTGTTACTTGTGTGAAACA+CGG - chr7_1:54254158-54254177 Msa1024650:intron 30.0%
TTGTATTCTGTACTCAGATT+TGG - chr7_1:54254317-54254336 Msa1024650:intron 30.0%
! ACCCTACTCTACTAATATTT+TGG - chr7_1:54254352-54254371 Msa1024650:intron 30.0%
GCCAAAATATTAGTAGAGTA+GGG + chr7_1:54254356-54254375 None:intergenic 30.0%
!! ATCTTATTGCTGTTTACTGT+AGG - chr7_1:54254402-54254421 Msa1024650:intron 30.0%
CAAGAACAAGTACATCTTAA+AGG + chr7_1:54254440-54254459 None:intergenic 30.0%
ATGTACTTGTTCTTGAACTA+TGG - chr7_1:54254445-54254464 Msa1024650:CDS 30.0%
GTATTCTTTCTTTGTTCTCT+TGG + chr7_1:54254543-54254562 None:intergenic 30.0%
! TAACGCTGAAAAAGCTTTAA+TGG + chr7_1:54254595-54254614 None:intergenic 30.0%
TTCGCAAACAAGAAATTCTC+CGG + chr7_1:54249506-54249525 None:intergenic 35.0%
!!! CCGCTTAAAGCTATTGATTT+TGG - chr7_1:54249542-54249561 Msa1024650:CDS 35.0%
CTGTCTATATTCTTTAAGCC+AGG - chr7_1:54249566-54249585 Msa1024650:CDS 35.0%
TTATGTGTAGTGAGTGTGTT+TGG - chr7_1:54249633-54249652 Msa1024650:CDS 35.0%
!! TACACTTTTGGAGATTTAGG+TGG - chr7_1:54249846-54249865 Msa1024650:CDS 35.0%
AAGTGTGCTAAGTAGAATCT+AGG - chr7_1:54249919-54249938 Msa1024650:CDS 35.0%
!!! CTGGTTTCTTGTTTTCTGTA+TGG - chr7_1:54250035-54250054 Msa1024650:intron 35.0%
!!! TCTTGTTTTCTGTATGGAGA+TGG - chr7_1:54250041-54250060 Msa1024650:intron 35.0%
!! CTTGTTTTCTGTATGGAGAT+GGG - chr7_1:54250042-54250061 Msa1024650:intron 35.0%
!! GGGAAGTGTTTGAATACATT+AGG - chr7_1:54250137-54250156 Msa1024650:intron 35.0%
GTATGGTATCTTCGTTTCAT+AGG - chr7_1:54250344-54250363 Msa1024650:CDS 35.0%
CAGTTTGTGCATACTATGAA+AGG + chr7_1:54250376-54250395 None:intergenic 35.0%
ACCATTAGCAATGTAGAAAC+GGG + chr7_1:54250423-54250442 None:intergenic 35.0%
TGATGTTGTATGGTTGAGTT+AGG - chr7_1:54250492-54250511 Msa1024650:intron 35.0%
CATTATCATTGATCCGCTAT+TGG - chr7_1:54250545-54250564 Msa1024650:CDS 35.0%
ATCTGTAATATCCACGTACT+AGG - chr7_1:54250571-54250590 Msa1024650:CDS 35.0%
! AAAATTATTGGCCTAGTACG+TGG + chr7_1:54250585-54250604 None:intergenic 35.0%
! ACGTACTAGGCCAATAATTT+TGG - chr7_1:54250584-54250603 Msa1024650:CDS 35.0%
!! GCCAATAATTTTGGCATGAA+GGG - chr7_1:54250593-54250612 Msa1024650:CDS 35.0%
!! CCAATAATTTTGGCATGAAG+GGG - chr7_1:54250594-54250613 Msa1024650:CDS 35.0%
GCCTCAAGATGAACATTATT+GGG + chr7_1:54250649-54250668 None:intergenic 35.0%
AGCCTCAAGATGAACATTAT+TGG + chr7_1:54250650-54250669 None:intergenic 35.0%
TCTTGAGGCTCAAAAATTTC+TGG - chr7_1:54250660-54250679 Msa1024650:intron 35.0%
!! TCTGGCTTCTAAGTAGTTTT+TGG - chr7_1:54250678-54250697 Msa1024650:intron 35.0%
GTATACAGTGAAAACAACAG+GGG + chr7_1:54250953-54250972 None:intergenic 35.0%
GAGTATACAGTGAAAACAAC+AGG + chr7_1:54250955-54250974 None:intergenic 35.0%
ACCAAAATAATCGGCCTATT+GGG + chr7_1:54251073-54251092 None:intergenic 35.0%
TACCAAAATAATCGGCCTAT+TGG + chr7_1:54251074-54251093 None:intergenic 35.0%
AAAAAGCTTCCTTGCTTTGT+TGG + chr7_1:54251195-54251214 None:intergenic 35.0%
CTGGAAAGGTTCTTCAATTA+AGG + chr7_1:54251282-54251301 None:intergenic 35.0%
! AATCCCTTTTCATTGCTTAC+AGG - chr7_1:54251514-54251533 Msa1024650:intron 35.0%
! ATTTCTGAGAATTTCTCACC+TGG + chr7_1:54251586-54251605 None:intergenic 35.0%
GCACTCCATATATCTATTTC+AGG + chr7_1:54251661-54251680 None:intergenic 35.0%
GAAATAGATATATGGAGTGC+AGG - chr7_1:54251661-54251680 Msa1024650:intron 35.0%
ATTATTACCAGCCCAAAATG+GGG + chr7_1:54251719-54251738 None:intergenic 35.0%
TATGCACATGTACATGTAGA+GGG + chr7_1:54251789-54251808 None:intergenic 35.0%
CTTATTATCCCACTAAATGG+GGG + chr7_1:54251834-54251853 None:intergenic 35.0%
CCTTATTATCCCACTAAATG+GGG + chr7_1:54251835-54251854 None:intergenic 35.0%
! GCCTTATTATCCCACTAAAT+GGG + chr7_1:54251836-54251855 None:intergenic 35.0%
!! AGCCTTATTATCCCACTAAA+TGG + chr7_1:54251837-54251856 None:intergenic 35.0%
TTTAGTGGGATAATAAGGCT+TGG - chr7_1:54251837-54251856 Msa1024650:CDS 35.0%
TGTAATTACCAGCCCAAAAT+GGG + chr7_1:54251876-54251895 None:intergenic 35.0%
ATGTAATTACCAGCCCAAAA+TGG + chr7_1:54251877-54251896 None:intergenic 35.0%
TTCAGACTCACTCAAACTAA+AGG + chr7_1:54252018-54252037 None:intergenic 35.0%
!! TTGTCTCGTGTTTTTGAACT+TGG - chr7_1:54252108-54252127 Msa1024650:intron 35.0%
CATCAAGGTAATATGATAGC+AGG + chr7_1:54252277-54252296 None:intergenic 35.0%
CTGCATTAGGATTAACATCA+AGG + chr7_1:54252292-54252311 None:intergenic 35.0%
GAGGGCTTATAGATTTCAAA+CGG - chr7_1:54252345-54252364 Msa1024650:intron 35.0%
AGGGCTTATAGATTTCAAAC+GGG - chr7_1:54252346-54252365 Msa1024650:intron 35.0%
AAATAGGGAAACAACACTGA+TGG - chr7_1:54252742-54252761 Msa1024650:intron 35.0%
GATTCAAAAGAAAAGCCCTT+AGG - chr7_1:54252993-54253012 Msa1024650:intron 35.0%
AAGATTGTACCGTTGAAAAC+AGG - chr7_1:54253075-54253094 Msa1024650:intron 35.0%
GATGTCTTCAACTTCTTCAT+TGG + chr7_1:54253119-54253138 None:intergenic 35.0%
CAAAGAGATGTTCAAGAAGA+TGG - chr7_1:54253138-54253157 Msa1024650:intron 35.0%
GTTTATTGAAGCTGTGAGTA+TGG - chr7_1:54253252-54253271 Msa1024650:intron 35.0%
CAATAAGCTAGAAGAAAAGG+GGG + chr7_1:54253285-54253304 None:intergenic 35.0%
! TAAACTTGCCACTTGTAACT+GGG - chr7_1:54253309-54253328 Msa1024650:intron 35.0%
GTCGAATCATTCTAATACGA+AGG - chr7_1:54253340-54253359 Msa1024650:intron 35.0%
ATGAAAACAGAGCATAGGAA+AGG + chr7_1:54253399-54253418 None:intergenic 35.0%
TTTCAGTACCATTCACACAA+TGG + chr7_1:54253435-54253454 None:intergenic 35.0%
! GATCATTGTTTGTTGACATC+AGG - chr7_1:54253505-54253524 Msa1024650:intron 35.0%
ATCCTTGTCAAAATAGGAGA+AGG + chr7_1:54253627-54253646 None:intergenic 35.0%
!!! TTCTCCTATTTTGACAAGGA+TGG - chr7_1:54253626-54253645 Msa1024650:intron 35.0%
!!! TCTCCTATTTTGACAAGGAT+GGG - chr7_1:54253627-54253646 Msa1024650:intron 35.0%
ATTCCCATCCTTGTCAAAAT+AGG + chr7_1:54253633-54253652 None:intergenic 35.0%
!!! TATTTTGACAAGGATGGGAA+TGG - chr7_1:54253632-54253651 Msa1024650:intron 35.0%
ATATTGAACCAGAAGAGCTA+CGG - chr7_1:54253657-54253676 Msa1024650:intron 35.0%
TTTACATGTAGTCACGGTTA+AGG - chr7_1:54253779-54253798 Msa1024650:intron 35.0%
ATTCTTGAACAACTACAGGA+TGG - chr7_1:54253818-54253837 Msa1024650:intron 35.0%
TTTGTGGCTATGATGAAAAC+TGG - chr7_1:54253860-54253879 Msa1024650:intron 35.0%
! TATTTGGTTCCTCGTTAGAT+AGG - chr7_1:54254073-54254092 Msa1024650:intron 35.0%
! ATTTGGTTCCTCGTTAGATA+GGG - chr7_1:54254074-54254093 Msa1024650:intron 35.0%
GTGTTTCACACAAGTAACAA+AGG + chr7_1:54254159-54254178 None:intergenic 35.0%
AATCATACATGTCACACCAT+TGG + chr7_1:54254194-54254213 None:intergenic 35.0%
AGGCTGGATGTTAAAATGAT+TGG + chr7_1:54254217-54254236 None:intergenic 35.0%
ACTACAAGATATTCACACCT+CGG + chr7_1:54254297-54254316 None:intergenic 35.0%
GGCCAAAATATTAGTAGAGT+AGG + chr7_1:54254357-54254376 None:intergenic 35.0%
!!! CTAATATTTTGGCCAGAGAA+TGG - chr7_1:54254363-54254382 Msa1024650:intron 35.0%
CTTCTTACGCACTTAAATAG+TGG + chr7_1:54254514-54254533 None:intergenic 35.0%
GAGAACAAAGAAAGAATACC+CGG - chr7_1:54254544-54254563 Msa1024650:exon 35.0%
!!! AAAGCTTTTTCAGCGTTACT+AGG - chr7_1:54254597-54254616 Msa1024650:five_prime_UTR 35.0%
!!! AAGCTTTTTCAGCGTTACTA+GGG - chr7_1:54254598-54254617 Msa1024650:five_prime_UTR 35.0%
AACATCATCAACATCAACGG+CGG + chr7_1:54249240-54249259 None:intergenic 40.0%
GCGAACATCATCAACATCAA+CGG + chr7_1:54249243-54249262 None:intergenic 40.0%
GTCACAATACTCGAACTCTT+GGG + chr7_1:54249293-54249312 None:intergenic 40.0%
AGTCACAATACTCGAACTCT+TGG + chr7_1:54249294-54249313 None:intergenic 40.0%
! CTTGTTATGGAGCTTTGTGA+AGG - chr7_1:54249350-54249369 Msa1024650:three_prime_UTR 40.0%
! TTATGGAGCTTTGTGAAGGT+GGG - chr7_1:54249354-54249373 Msa1024650:three_prime_UTR 40.0%
TTTGATCGGATTGTTGCTAG+AGG - chr7_1:54249383-54249402 Msa1024650:three_prime_UTR 40.0%
TTGATCGGATTGTTGCTAGA+GGG - chr7_1:54249384-54249403 Msa1024650:three_prime_UTR 40.0%
!! TGTTGCTAGAGGGCATTATA+CGG - chr7_1:54249394-54249413 Msa1024650:three_prime_UTR 40.0%
TTAGTGCTGCAATTAGTTGG+TGG - chr7_1:54249746-54249765 Msa1024650:intron 40.0%
TAGTGCTGCAATTAGTTGGT+GGG - chr7_1:54249747-54249766 Msa1024650:intron 40.0%
GGTCTAGTCTAGATTGTTCA+AGG - chr7_1:54249802-54249821 Msa1024650:CDS 40.0%
! TGCCAAGCTTTTTGTGATTC+AGG - chr7_1:54249961-54249980 Msa1024650:CDS 40.0%
! GCCAAGCTTTTTGTGATTCA+GGG - chr7_1:54249962-54249981 Msa1024650:CDS 40.0%
ACCCTGAATCACAAAAAGCT+TGG + chr7_1:54249966-54249985 None:intergenic 40.0%
! CTTTTTGTGATTCAGGGTGA+GGG - chr7_1:54249968-54249987 Msa1024650:CDS 40.0%
! TTTTTGTGATTCAGGGTGAG+GGG - chr7_1:54249969-54249988 Msa1024650:CDS 40.0%
CTAAATGCTTTGTAAGCTGC+AGG - chr7_1:54250110-54250129 Msa1024650:intron 40.0%
! TTGTAGTGGGATTGTGTTTG+TGG - chr7_1:54250165-54250184 Msa1024650:intron 40.0%
CCATTAGCAATGTAGAAACG+GGG + chr7_1:54250422-54250441 None:intergenic 40.0%
CAACATCAACTTATAAGGGG+AGG + chr7_1:54250480-54250499 None:intergenic 40.0%
!! GGCCAATAATTTTGGCATGA+AGG - chr7_1:54250592-54250611 Msa1024650:CDS 40.0%
CCCCTTCATGCCAAAATTAT+TGG + chr7_1:54250597-54250616 None:intergenic 40.0%
TGAAGGGGTTTATCAGAGAA+TGG - chr7_1:54250609-54250628 Msa1024650:intron 40.0%
GCCCAATAATGTTCATCTTG+AGG - chr7_1:54250645-54250664 Msa1024650:intron 40.0%
!! GTGAAAACAACAGGGGTATT+GGG + chr7_1:54250946-54250965 None:intergenic 40.0%
! AGTGAAAACAACAGGGGTAT+TGG + chr7_1:54250947-54250966 None:intergenic 40.0%
! ACCCAATAGGCCGATTATTT+TGG - chr7_1:54251069-54251088 Msa1024650:CDS 40.0%
!! AGCTTACATTAGAGGGTGTT+TGG + chr7_1:54251348-54251367 None:intergenic 40.0%
AGCGCTACATACGTTAAGTT+AGG - chr7_1:54251404-54251423 Msa1024650:intron 40.0%
TCCATATTATATGGCTCCAG+AGG - chr7_1:54251615-54251634 Msa1024650:intron 40.0%
!! ACCTCTGGAGCCATATAATA+TGG + chr7_1:54251619-54251638 None:intergenic 40.0%
TTATTACCAGCCCAAAATGG+GGG + chr7_1:54251718-54251737 None:intergenic 40.0%
ATGCACATGTACATGTAGAG+GGG + chr7_1:54251788-54251807 None:intergenic 40.0%
GTATGCACATGTACATGTAG+AGG + chr7_1:54251790-54251809 None:intergenic 40.0%
CCCCATTTAGTGGGATAATA+AGG - chr7_1:54251832-54251851 Msa1024650:CDS 40.0%
!!! TGGTTGTTGTTTCCCCATTT+TGG - chr7_1:54251860-54251879 Msa1024650:CDS 40.0%
!!! GGTTGTTGTTTCCCCATTTT+GGG - chr7_1:54251861-54251880 Msa1024650:CDS 40.0%
GTAATTACCAGCCCAAAATG+GGG + chr7_1:54251875-54251894 None:intergenic 40.0%
TTGCACAAGCTATTCTTCGA+GGG - chr7_1:54252327-54252346 Msa1024650:intron 40.0%
TAGATTTCAAACGGGAACCT+TGG - chr7_1:54252354-54252373 Msa1024650:intron 40.0%
AGACCCTAAGCTTCGATTAA+CGG - chr7_1:54252427-54252446 Msa1024650:intron 40.0%
GAACATACCAAGCACTTGTT+TGG + chr7_1:54252453-54252472 None:intergenic 40.0%
GGTATGTTCATGACTTTCCA+TGG - chr7_1:54252464-54252483 Msa1024650:intron 40.0%
TCTCAAAACCATCTCCTTTC+TGG - chr7_1:54252588-54252607 Msa1024650:intron 40.0%
CTCAAAACCATCTCCTTTCT+GGG - chr7_1:54252589-54252608 Msa1024650:intron 40.0%
ATTAAGACCCAGAAAGGAGA+TGG + chr7_1:54252599-54252618 None:intergenic 40.0%
GAAACAACACTGATGGTTGA+AGG - chr7_1:54252749-54252768 Msa1024650:intron 40.0%
ACATCACCAAGAGGAACATT+TGG + chr7_1:54252935-54252954 None:intergenic 40.0%
!! TTGGTGATGTTGTCAAGTCA+AGG - chr7_1:54252945-54252964 Msa1024650:intron 40.0%
AAAAGAAAAGCCCTTAGGGT+TGG - chr7_1:54252998-54253017 Msa1024650:intron 40.0%
ATGCAATGAACCAACCCTAA+GGG + chr7_1:54253011-54253030 None:intergenic 40.0%
TATGCAATGAACCAACCCTA+AGG + chr7_1:54253012-54253031 None:intergenic 40.0%
! CAGCAATGACCTGTTTTCAA+CGG + chr7_1:54253087-54253106 None:intergenic 40.0%
! CAAGTTGAGACTGATGGTTT+CGG + chr7_1:54253213-54253232 None:intergenic 40.0%
! CTAAACTTGCCACTTGTAAC+TGG - chr7_1:54253308-54253327 Msa1024650:intron 40.0%
GGTAAGGGAACACTAGATTA+CGG - chr7_1:54253539-54253558 Msa1024650:intron 40.0%
AAATGACGAGCATCTTCACA+AGG - chr7_1:54253601-54253620 Msa1024650:intron 40.0%
ATCAGTTCCATCTTCCATCA+AGG + chr7_1:54253687-54253706 None:intergenic 40.0%
GGCTATGATGAAAACTGGAA+CGG - chr7_1:54253865-54253884 Msa1024650:intron 40.0%
AGGAGGACTATTACACTATG+TGG + chr7_1:54254023-54254042 None:intergenic 40.0%
GTAATAGTCCTCCTAAATCC+TGG - chr7_1:54254029-54254048 Msa1024650:intron 40.0%
TCAGACAACAACAGGTGAAA+AGG + chr7_1:54254101-54254120 None:intergenic 40.0%
CTTTCTTTGTTCTCTTGGGA+TGG + chr7_1:54254538-54254557 None:intergenic 40.0%
!!! AGCTTTTTCAGCGTTACTAG+GGG - chr7_1:54254599-54254618 Msa1024650:five_prime_UTR 40.0%
TCTGCAGCAGTTACCCATAT+CGG + chr7_1:54248955-54248974 None:intergenic 45.0%
TGGTTTCAGTTCGTTTAGGG+TGG + chr7_1:54249031-54249050 None:intergenic 45.0%
CGGTGGTTTCAGTTCGTTTA+GGG + chr7_1:54249034-54249053 None:intergenic 45.0%
! TTCCATGTTGTCGGAGGTTT+TGG + chr7_1:54249096-54249115 None:intergenic 45.0%
GTAACGGTCTTCCATGTTGT+CGG + chr7_1:54249105-54249124 None:intergenic 45.0%
!! CCTGCAAAAGCATCTCCAAA+CGG - chr7_1:54249204-54249223 Msa1024650:three_prime_UTR 45.0%
TACTCGAACTCTTGGGCAAA+TGG + chr7_1:54249286-54249305 None:intergenic 45.0%
! GTTATGGAGCTTTGTGAAGG+TGG - chr7_1:54249353-54249372 Msa1024650:three_prime_UTR 45.0%
! TATGGAGCTTTGTGAAGGTG+GGG - chr7_1:54249355-54249374 Msa1024650:three_prime_UTR 45.0%
! AAGGTGGGGAGCTTTTTGAT+CGG - chr7_1:54249369-54249388 Msa1024650:three_prime_UTR 45.0%
! GTGCAGCTTTGTCATAAGCA+TGG - chr7_1:54249458-54249477 Msa1024650:three_prime_UTR 45.0%
GATTCATCGCGATCTTAAGC+CGG - chr7_1:54249484-54249503 Msa1024650:three_prime_UTR 45.0%
! AGCTGAATCTGAGGTGTAGT+GGG - chr7_1:54249594-54249613 Msa1024650:CDS 45.0%
!! AGTTGGTGGGTCTAGCATAT+TGG - chr7_1:54249760-54249779 Msa1024650:CDS 45.0%
GTGGGTCTAGCATATTGGAT+AGG - chr7_1:54249765-54249784 Msa1024650:CDS 45.0%
! GCTTTTTGTGATTCAGGGTG+AGG - chr7_1:54249967-54249986 Msa1024650:CDS 45.0%
! TTTTGTGATTCAGGGTGAGG+GGG - chr7_1:54249970-54249989 Msa1024650:CDS 45.0%
!! TGCTGGTTTCCTGTTTGCTA+GGG - chr7_1:54249998-54250017 Msa1024650:intron 45.0%
! TTTTCTGTATGGAGATGGGC+TGG - chr7_1:54250046-54250065 Msa1024650:intron 45.0%
CTTTGTAAGCTGCAGGTGAA+GGG - chr7_1:54250117-54250136 Msa1024650:intron 45.0%
CCCCGTTTCTACATTGCTAA+TGG - chr7_1:54250419-54250438 Msa1024650:intron 45.0%
ATTATTGGGCCTGACTGACT+TGG + chr7_1:54250635-54250654 None:intergenic 45.0%
TGCACATGTACATGTAGAGG+GGG + chr7_1:54251787-54251806 None:intergenic 45.0%
GCATACTCTATCCATTCCTG+TGG - chr7_1:54251804-54251823 Msa1024650:CDS 45.0%
AGTGGGATAATAAGGCTTGG+TGG - chr7_1:54251840-54251859 Msa1024650:CDS 45.0%
AGATGCTCATGCACATGTAG+AGG + chr7_1:54251946-54251965 None:intergenic 45.0%
CCTTGCTCAGATTCTGCATT+AGG + chr7_1:54252305-54252324 None:intergenic 45.0%
CCTAATGCAGAATCTGAGCA+AGG - chr7_1:54252302-54252321 Msa1024650:intron 45.0%
GTTGCACAAGCTATTCTTCG+AGG - chr7_1:54252326-54252345 Msa1024650:intron 45.0%
CTTTCAGAAATACTGGGCCA+AGG + chr7_1:54252374-54252393 None:intergenic 45.0%
GTTAATCGAAGCTTAGGGTC+TGG + chr7_1:54252428-54252447 None:intergenic 45.0%
TGGCCGTTAATCGAAGCTTA+GGG + chr7_1:54252433-54252452 None:intergenic 45.0%
TTGGCCGTTAATCGAAGCTT+AGG + chr7_1:54252434-54252453 None:intergenic 45.0%
TTAACGGCCAAACAAGTGCT+TGG - chr7_1:54252443-54252462 Msa1024650:intron 45.0%
ACACTGATGGTTGAAGGAGA+TGG - chr7_1:54252755-54252774 Msa1024650:intron 45.0%
CACTGATGGTTGAAGGAGAT+GGG - chr7_1:54252756-54252775 Msa1024650:intron 45.0%
!! TTCTTAGCATTCTGGAGCCA+AGG + chr7_1:54252908-54252927 None:intergenic 45.0%
TTGGCTCCAGAATGCTAAGA+AGG - chr7_1:54252907-54252926 Msa1024650:intron 45.0%
TTGGAGCCTTCTTAGCATTC+TGG + chr7_1:54252916-54252935 None:intergenic 45.0%
AAGGCTCCAAATGTTCCTCT+TGG - chr7_1:54252926-54252945 Msa1024650:intron 45.0%
GACTTGACAACATCACCAAG+AGG + chr7_1:54252944-54252963 None:intergenic 45.0%
! ACTCAGCAAGTTGAGACTGA+TGG + chr7_1:54253219-54253238 None:intergenic 45.0%
AGAACAAGCCCAGTTACAAG+TGG + chr7_1:54253320-54253339 None:intergenic 45.0%
!!! GGCCTTCTCCTATTTTGACA+AGG - chr7_1:54253622-54253641 Msa1024650:intron 45.0%
CCTTGTCTGTGTCTACTTCT+TGG + chr7_1:54253739-54253758 None:intergenic 45.0%
CCAAGAAGTAGACACAGACA+AGG - chr7_1:54253736-54253755 Msa1024650:intron 45.0%
AGAAGCCAAGTCCAGGATTT+AGG + chr7_1:54254043-54254062 None:intergenic 45.0%
ATCACAAAGAAGCCAAGTCC+AGG + chr7_1:54254050-54254069 None:intergenic 45.0%
GAAAAGGACCCTATCTAACG+AGG + chr7_1:54254085-54254104 None:intergenic 45.0%
TTCGTGACTCAGACAACAAC+AGG + chr7_1:54254109-54254128 None:intergenic 45.0%
TGTTGTTGTCTGAGTCACGA+AGG - chr7_1:54254108-54254127 Msa1024650:intron 45.0%
TAACATCCAGCCTTCTCTTG+TGG - chr7_1:54254224-54254243 Msa1024650:intron 45.0%
CATTCCCAAACCACAAGAGA+AGG + chr7_1:54254237-54254256 None:intergenic 45.0%
GCAGTCTGATTGTTTATCCG+AGG - chr7_1:54254277-54254296 Msa1024650:intron 45.0%
TGGAATACACAGCCATTCTC+TGG + chr7_1:54254378-54254397 None:intergenic 45.0%
!! AAATAATTAAAATAGTAATT+GGG + chr7_1:54251047-54251066 None:intergenic 5.0%
!! TTCTTTAATTAAATTTAAAT+AGG - chr7_1:54252726-54252745 Msa1024650:intron 5.0%
!! TCTTTAATTAAATTTAAATA+GGG - chr7_1:54252727-54252746 Msa1024650:intron 5.0%
TACCCATATCGGAGGTGGAT+CGG + chr7_1:54248944-54248963 None:intergenic 50.0%
TTTGACATCTTCGCGTGCGA+CGG + chr7_1:54248988-54249007 None:intergenic 50.0%
GCGGTGGTTTCAGTTCGTTT+AGG + chr7_1:54249035-54249054 None:intergenic 50.0%
!!! AGGGGATTTTTTGTTGGCGG+TGG + chr7_1:54249051-54249070 None:intergenic 50.0%
!!! CGGAGGGGATTTTTTGTTGG+CGG + chr7_1:54249054-54249073 None:intergenic 50.0%
CGCCAACAAAAAATCCCCTC+CGG - chr7_1:54249052-54249071 Msa1024650:three_prime_UTR 50.0%
!!! GACCGGAGGGGATTTTTTGT+TGG + chr7_1:54249057-54249076 None:intergenic 50.0%
!! CATGTTGTCGGAGGTTTTGG+TGG + chr7_1:54249093-54249112 None:intergenic 50.0%
CACCAAAACCTCCGACAACA+TGG - chr7_1:54249091-54249110 Msa1024650:three_prime_UTR 50.0%
GTTCACGGTCGATGAGGTAA+CGG + chr7_1:54249121-54249140 None:intergenic 50.0%
TACCTCATCGACCGTGAACT+CGG - chr7_1:54249122-54249141 Msa1024650:three_prime_UTR 50.0%
GTCACGGTCGATACAGAGAT+AGG + chr7_1:54249168-54249187 None:intergenic 50.0%
! CCGTTTGGAGATGCTTTTGC+AGG + chr7_1:54249207-54249226 None:intergenic 50.0%
GGCGCATGATAGCAACTTCA+CGG + chr7_1:54249265-54249284 None:intergenic 50.0%
! AGGGCATTATACGGAGAGAG+CGG - chr7_1:54249403-54249422 Msa1024650:three_prime_UTR 50.0%
CTCAGATTCAGCTCCATACC+TGG + chr7_1:54249587-54249606 None:intergenic 50.0%
CAGGTATGGAGCTGAATCTG+AGG - chr7_1:54249585-54249604 Msa1024650:CDS 50.0%
! GAGCTGAATCTGAGGTGTAG+TGG - chr7_1:54249593-54249612 Msa1024650:CDS 50.0%
TAGGTGGCTGCTGAGGATAA+AGG - chr7_1:54249862-54249881 Msa1024650:CDS 50.0%
TTTGTGATTCAGGGTGAGGG+GGG - chr7_1:54249971-54249990 Msa1024650:CDS 50.0%
!! GTGCTGGTTTCCTGTTTGCT+AGG - chr7_1:54249997-54250016 Msa1024650:intron 50.0%
! GTTTCCTGTTTGCTAGGGTG+AGG - chr7_1:54250003-54250022 Msa1024650:intron 50.0%
GCTTTGTAAGCTGCAGGTGA+AGG - chr7_1:54250116-54250135 Msa1024650:intron 50.0%
AGAGAATGGCCAAGTCAGTC+AGG - chr7_1:54250623-54250642 Msa1024650:intron 50.0%
GCACATGTACATGTAGAGGG+GGG + chr7_1:54251786-54251805 None:intergenic 50.0%
ACTAAATGGGGGAACACCAC+AGG + chr7_1:54251823-54251842 None:intergenic 50.0%
TGTGGTGTTCCCCCATTTAG+TGG - chr7_1:54251822-54251841 Msa1024650:CDS 50.0%
GTGGTGTTCCCCCATTTAGT+GGG - chr7_1:54251823-54251842 Msa1024650:CDS 50.0%
!! GTTGTTTCCCCATTTTGGGC+TGG - chr7_1:54251865-54251884 Msa1024650:CDS 50.0%
GCTCATGCACATGTAGAGGA+GGG + chr7_1:54251942-54251961 None:intergenic 50.0%
TGCTCATGCACATGTAGAGG+AGG + chr7_1:54251943-54251962 None:intergenic 50.0%
GAAGGAGATGGGTCTATGTG+TGG - chr7_1:54252767-54252786 Msa1024650:intron 50.0%
! CTTGTCTTGCAGAGCATCCT+TGG - chr7_1:54252888-54252907 Msa1024650:intron 50.0%
CTTCTCGGCATTACTCACGT+GGG - chr7_1:54253900-54253919 Msa1024650:intron 50.0%
GTCCTCCTAAATCCTGGACT+TGG - chr7_1:54254035-54254054 Msa1024650:intron 50.0%
AGCCAAGTCCAGGATTTAGG+AGG + chr7_1:54254040-54254059 None:intergenic 50.0%
TGTCTGAGTCACGAAGGAAG+AGG - chr7_1:54254114-54254133 Msa1024650:intron 50.0%
TTGTGTGAAACACGGTGCCT+TGG - chr7_1:54254166-54254185 Msa1024650:intron 50.0%
!! ATGTCACACCATTGGCTCCA+AGG + chr7_1:54254186-54254205 None:intergenic 50.0%
TCCAGCCTTCTCTTGTGGTT+TGG - chr7_1:54254229-54254248 Msa1024650:intron 50.0%
CCAGCCTTCTCTTGTGGTTT+GGG - chr7_1:54254230-54254249 Msa1024650:intron 50.0%
!! GAGAAGTGGTGGTGGTGGTT+GGG + chr7_1:54248922-54248941 None:intergenic 55.0%
TCTCCGATCCACCTCCGATA+TGG - chr7_1:54248938-54248957 Msa1024650:intron 55.0%
CTCCGATCCACCTCCGATAT+GGG - chr7_1:54248939-54248958 Msa1024650:intron 55.0%
GCAGTTACCCATATCGGAGG+TGG + chr7_1:54248949-54248968 None:intergenic 55.0%
GCAGCAGTTACCCATATCGG+AGG + chr7_1:54248952-54248971 None:intergenic 55.0%
GGGTAACTGCTGCAGATCTC+CGG - chr7_1:54248959-54248978 Msa1024650:intron 55.0%
GTGGTCGTGGTTGGAGAAAG+AGG + chr7_1:54249012-54249031 None:intergenic 55.0%
! TCGTTTAGGGTGGTCGTGGT+TGG + chr7_1:54249021-54249040 None:intergenic 55.0%
! CAGTTCGTTTAGGGTGGTCG+TGG + chr7_1:54249025-54249044 None:intergenic 55.0%
!! GTTGTCGGAGGTTTTGGTGG+CGG + chr7_1:54249090-54249109 None:intergenic 55.0%
ACGGTCTTCCATGTTGTCGG+AGG + chr7_1:54249102-54249121 None:intergenic 55.0%
AGGTTACTCCGAATTCGCCG+CGG + chr7_1:54249148-54249167 None:intergenic 55.0%
GACTCTTCGTGAAGCGTGTG+AGG - chr7_1:54249310-54249329 Msa1024650:three_prime_UTR 55.0%
GCATTATACGGAGAGAGCGG+CGG - chr7_1:54249406-54249425 Msa1024650:three_prime_UTR 55.0%
GGAGATTTAGGTGGCTGCTG+AGG - chr7_1:54249855-54249874 Msa1024650:CDS 55.0%
TTGTGATTCAGGGTGAGGGG+GGG - chr7_1:54249972-54249991 Msa1024650:intron 55.0%
! TCCTGTTTGCTAGGGTGAGG+AGG - chr7_1:54250006-54250025 Msa1024650:intron 55.0%
! CCTGTTTGCTAGGGTGAGGA+GGG - chr7_1:54250007-54250026 Msa1024650:intron 55.0%
TAGTTCCGCTTGAGCACCTC+TGG + chr7_1:54251634-54251653 None:intergenic 55.0%
! GAGGTGCTCAAGCGGAACTA+TGG - chr7_1:54251634-54251653 Msa1024650:intron 55.0%
! TGTGCGGTGTTCCCCCATTT+TGG - chr7_1:54251704-54251723 Msa1024650:intron 55.0%
! GTGCGGTGTTCCCCCATTTT+GGG - chr7_1:54251705-54251724 Msa1024650:intron 55.0%
ATGGGGGAACACCACAGGAA+TGG + chr7_1:54251818-54251837 None:intergenic 55.0%
! AAGGCACTCCGTAGCTCTTC+TGG + chr7_1:54253668-54253687 None:intergenic 55.0%
! AGAGCTACGGAGTGCCTTGA+TGG - chr7_1:54253670-54253689 Msa1024650:intron 55.0%
! CGGAGTGCCTTGATGGAAGA+TGG - chr7_1:54253677-54253696 Msa1024650:intron 55.0%
GCTTCTCGGCATTACTCACG+TGG - chr7_1:54253899-54253918 Msa1024650:intron 55.0%
CCCAAACCACAAGAGAAGGC+TGG + chr7_1:54254233-54254252 None:intergenic 55.0%
!! GGAGAAGTGGTGGTGGTGGT+TGG + chr7_1:54248923-54248942 None:intergenic 60.0%
!! GATCGGAGAAGTGGTGGTGG+TGG + chr7_1:54248927-54248946 None:intergenic 60.0%
GTGGATCGGAGAAGTGGTGG+TGG + chr7_1:54248930-54248949 None:intergenic 60.0%
GAGGTGGATCGGAGAAGTGG+TGG + chr7_1:54248933-54248952 None:intergenic 60.0%
TCGGAGGTGGATCGGAGAAG+TGG + chr7_1:54248936-54248955 None:intergenic 60.0%
CGAGTAGCTCGCGAGTGTCA+CGG + chr7_1:54249184-54249203 None:intergenic 60.0%
GGCGGTTCGTAGCTTCCGTT+TGG + chr7_1:54249222-54249241 None:intergenic 60.0%
TGCGGTTGCGAGGACGATTG+TGG - chr7_1:54249430-54249449 Msa1024650:three_prime_UTR 60.0%
GGTTGCGAGGACGATTGTGG+AGG - chr7_1:54249433-54249452 Msa1024650:three_prime_UTR 60.0%
CCCTCCTCACCCTAGCAAAC+AGG + chr7_1:54250010-54250029 None:intergenic 60.0%
! GTTTGCTAGGGTGAGGAGGG+AGG - chr7_1:54250010-54250029 Msa1024650:intron 60.0%
!! TGGCTCCAGAGGTGCTCAAG+CGG - chr7_1:54251626-54251645 Msa1024650:intron 60.0%
! GGTGTTCCCCCATTTTGGGC+TGG - chr7_1:54251709-54251728 Msa1024650:intron 60.0%
ACACGGTGCCTTGGAGCCAA+TGG - chr7_1:54254175-54254194 Msa1024650:intron 60.0%
GACATCTTCGCGTGCGACGG+CGG + chr7_1:54248985-54249004 None:intergenic 65.0%
!!! GGTTTTGGTGGCGGCGAGGA+CGG + chr7_1:54249081-54249100 None:intergenic 65.0%
GGCCGAGTTCACGGTCGATG+AGG + chr7_1:54249127-54249146 None:intergenic 65.0%
ATCGACCGTGAACTCGGCCG+CGG - chr7_1:54249128-54249147 Msa1024650:three_prime_UTR 65.0%
ATTCGCCGCGGCCGAGTTCA+CGG + chr7_1:54249136-54249155 None:intergenic 65.0%
GAACTCGGCCGCGGCGAATT+CGG - chr7_1:54249137-54249156 Msa1024650:three_prime_UTR 65.0%
! TAGGGTGAGGAGGGAGGTGC+TGG - chr7_1:54250016-54250035 Msa1024650:intron 65.0%
!!! CGGAGGTTTTGGTGGCGGCG+AGG + chr7_1:54249085-54249104 None:intergenic 70.0%
TACGGAGAGAGCGGCGGCTG+CGG - chr7_1:54249412-54249431 Msa1024650:three_prime_UTR 70.0%
! AGGGTGAGGGGGGGAAGTGC+TGG - chr7_1:54249981-54250000 Msa1024650:intron 70.0%
TCTTCGCGTGCGACGGCGGC+CGG + chr7_1:54248981-54249000 None:intergenic 75.0%
GGCGAGGACGGTGACCGGAG+GGG + chr7_1:54249069-54249088 None:intergenic 75.0%
CGGCGAGGACGGTGACCGGA+GGG + chr7_1:54249070-54249089 None:intergenic 75.0%
GTGGCGGCGAGGACGGTGAC+CGG + chr7_1:54249074-54249093 None:intergenic 75.0%
! GCGGCGAGGACGGTGACCGG+AGG + chr7_1:54249071-54249090 None:intergenic 80.0%
! GAGCGGCGGCTGCGGTTGCG+AGG - chr7_1:54249420-54249439 Msa1024650:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 54248890 54254627 54248890 ID=Msa1024650;Name=Msa1024650
chr7_1 mRNA 54248890 54254627 54248890 ID=Msa1024650-mRNA-1;Parent=Msa1024650;Name=Msa1024650-mRNA-1;_AED=0.21;_eAED=0.24;_QI=67|0.71|0.62|1|0.71|0.5|8|572|360
chr7_1 exon 54248890 54248916 54248890 ID=Msa1024650-mRNA-1:exon:10779;Parent=Msa1024650-mRNA-1
chr7_1 exon 54248987 54249681 54248987 ID=Msa1024650-mRNA-1:exon:10778;Parent=Msa1024650-mRNA-1
chr7_1 exon 54249760 54249990 54249760 ID=Msa1024650-mRNA-1:exon:10777;Parent=Msa1024650-mRNA-1
chr7_1 exon 54250244 54250420 54250244 ID=Msa1024650-mRNA-1:exon:10776;Parent=Msa1024650-mRNA-1
chr7_1 exon 54250502 54250617 54250502 ID=Msa1024650-mRNA-1:exon:10775;Parent=Msa1024650-mRNA-1
chr7_1 exon 54251053 54251205 54251053 ID=Msa1024650-mRNA-1:exon:10774;Parent=Msa1024650-mRNA-1
chr7_1 exon 54251787 54251925 54251787 ID=Msa1024650-mRNA-1:exon:10773;Parent=Msa1024650-mRNA-1
chr7_1 exon 54254444 54254627 54254444 ID=Msa1024650-mRNA-1:exon:10772;Parent=Msa1024650-mRNA-1
chr7_1 five_prime_UTR 54254561 54254627 54254561 ID=Msa1024650-mRNA-1:five_prime_utr;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54254444 54254560 54254444 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54251787 54251925 54251787 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54251053 54251205 54251053 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54250502 54250617 54250502 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54250244 54250420 54250244 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54249760 54249990 54249760 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 CDS 54249532 54249681 54249532 ID=Msa1024650-mRNA-1:cds;Parent=Msa1024650-mRNA-1
chr7_1 three_prime_UTR 54248987 54249531 54248987 ID=Msa1024650-mRNA-1:three_prime_utr;Parent=Msa1024650-mRNA-1
chr7_1 three_prime_UTR 54248890 54248916 54248890 ID=Msa1024650-mRNA-1:three_prime_utr;Parent=Msa1024650-mRNA-1
Gene Sequence

>Msa1024650

ATGGGTAACTGCTGCAGATCTCCGGCCGCCGTCGCACGCGAAGATGTCAAATCCTCTTTCTCCAACCACGACCACCCTAAACGAACTGAAACCACCGCCAACAAAAAATCCCCTCCGAAATTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGACCTGAAATAGATATATGGAGTGCAGGAGTGATACTCTATATCTTATTGTGCGGTGTTCCCCCATTTTGGGCTGAATCTGAGCAAGGAGTTGCACAAGCTATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCTAAAAGTCTTGTTAAGCAAATGTTGGAACCAGACCCTAAGCTTCGATTAACGGCCAAACAAGTGCTTGAGCATCCTTGGCTCCAGAATGCTAAGAAGGCTCCAAATGTTCCTCTTGGTGATGTTGTCAAGTCAAGGCTTAAGCAATTCTCAATGATGAATAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATCAAAGAGATGTTCAAGAAGATGGATACTGATAATGATGGTATTGTTTCCATTGAAGAACTAAAAGTTGGATTCCGAAACCATCAGTCTCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTGAGTATGGTAGATAATAATGGTAAGGGAACACTAGATTACGGAGAATTTGTTGCCATTTCCCTTCATTTAAAAAGGATGGCAAATGACGAGCATCTTCACAAGGCCTTCTCCTATTTTGACAAGGATGGGAATGGATATATTGAACCAGAAGAGCTACGGAGTGCCTTGATGGAAGATGGAACTGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACAGACAAGGATGGAAAAATCAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAGGCTTCTCGGCATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTAATGAAAGATGGTTCTTTAAACTTAGGAAATGAGTAG
Protein sequence

>Msa1024650

MGNCCRSPAAVAREDVKSSFSNHDHPKRTETTANKKSPPKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKEMFKKMDTDNDGIVSIEELKVGFRNHQSQLAESEVQMFIEAVSMVDNNGKGTLDYGEFVAISLHLKRMANDEHLHKAFSYFDKDGNGYIEPEELRSALMEDGTDDCTDVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE*