Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026210 | XP_003623570.1 | 93.162 | 585 | 24 | 2 | 1 | 585 | 1 | 569 | 0.0 | 1076 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026210 | sp|F4ISY0|Y2837_ARATH | 41.217 | 575 | 245 | 16 | 14 | 571 | 6 | 504 | 5.55e-102 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026210 | G7KX28 | 93.162 | 585 | 24 | 2 | 1 | 585 | 1 | 569 | 0.0 | 1076 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0751570 | Msa1026210 | 0.817251 | 3.633682e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026210 | MtrunA17_Chr7g0244501 | 93.162 | 585 | 24 | 2 | 1 | 585 | 1 | 569 | 0.0 | 1076 |
| Msa1026210 | MtrunA17_Chr4g0013151 | 63.475 | 564 | 162 | 13 | 12 | 568 | 76 | 602 | 0.0 | 585 |
| Msa1026210 | MtrunA17_Chr3g0114551 | 34.146 | 615 | 320 | 11 | 16 | 573 | 10 | 596 | 4.34e-73 | 246 |
| Msa1026210 | MtrunA17_Chr5g0438111 | 35.777 | 573 | 282 | 14 | 27 | 578 | 27 | 534 | 2.15e-70 | 237 |
| Msa1026210 | MtrunA17_Chr3g0133891 | 30.325 | 277 | 189 | 2 | 192 | 464 | 595 | 871 | 3.32e-24 | 108 |
| Msa1026210 | MtrunA17_Chr1g0153431 | 29.710 | 276 | 166 | 5 | 192 | 450 | 576 | 840 | 1.05e-18 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026210 | AT2G38370.1 | 41.217 | 575 | 245 | 16 | 14 | 571 | 6 | 504 | 5.64e-103 | 323 |
| Msa1026210 | AT2G38370.2 | 41.217 | 575 | 245 | 16 | 14 | 571 | 23 | 521 | 6.46e-103 | 323 |
| Msa1026210 | AT2G40480.1 | 35.044 | 565 | 251 | 15 | 27 | 578 | 54 | 515 | 1.49e-62 | 216 |
| Msa1026210 | AT3G51720.1 | 36.116 | 551 | 176 | 19 | 27 | 571 | 8 | 388 | 3.15e-58 | 201 |
| Msa1026210 | AT3G56270.1 | 31.388 | 497 | 230 | 15 | 16 | 502 | 25 | 420 | 1.77e-37 | 145 |
| Msa1026210 | AT2G26570.1 | 31.834 | 289 | 185 | 4 | 183 | 460 | 453 | 740 | 5.66e-25 | 110 |
| Msa1026210 | AT2G26570.1 | 38.760 | 129 | 59 | 4 | 11 | 139 | 145 | 253 | 2.02e-12 | 70.9 |
| Msa1026210 | AT2G26570.2 | 31.834 | 289 | 185 | 4 | 183 | 460 | 453 | 740 | 5.66e-25 | 110 |
| Msa1026210 | AT2G26570.2 | 38.760 | 129 | 59 | 4 | 11 | 139 | 145 | 253 | 2.02e-12 | 70.9 |
| Msa1026210 | AT5G42880.1 | 33.203 | 256 | 157 | 4 | 209 | 450 | 413 | 668 | 1.84e-18 | 90.1 |
| Msa1026210 | AT4G33390.1 | 31.461 | 267 | 179 | 2 | 192 | 454 | 460 | 726 | 2.62e-18 | 89.7 |
| Msa1026210 | AT4G33390.1 | 41.406 | 128 | 52 | 4 | 16 | 139 | 136 | 244 | 1.53e-13 | 74.7 |
| Msa1026210 | AT1G45545.1 | 28.185 | 259 | 161 | 2 | 192 | 448 | 443 | 678 | 2.55e-15 | 80.1 |
| Msa1026210 | AT1G45545.2 | 28.185 | 259 | 161 | 2 | 192 | 448 | 444 | 679 | 2.66e-15 | 80.1 |
Find 116 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGACGAATGTTGGAAAATT+TGG | 0.087836 | 7_1:+57843959 | Msa1026210:CDS |
| TAGAAGTTGAAGAGGCTTTA+AGG | 0.138410 | 7_1:+57845519 | Msa1026210:CDS |
| TTCTTCAAGGGCCTTCTTGC+AGG | 0.218507 | 7_1:-57845459 | None:intergenic |
| ATTAGGCTACTTGATGTAAA+TGG | 0.234789 | 7_1:+57845632 | Msa1026210:CDS |
| ATCTCTCACTTCTCATTCTA+AGG | 0.237177 | 7_1:+57843189 | Msa1026210:CDS |
| TGATGTAAATGGATTGAATT+TGG | 0.242394 | 7_1:+57845643 | Msa1026210:CDS |
| CAAATCTTCAACAAGCCTTT+TGG | 0.268546 | 7_1:-57844589 | None:intergenic |
| AGCAATATCATGAGTAGTTT+TGG | 0.271575 | 7_1:-57844826 | None:intergenic |
| TCTGCAAAGAGAAAGAAATT+TGG | 0.279965 | 7_1:+57845890 | Msa1026210:CDS |
| CTGCAAAGAGAAAGAAATTT+GGG | 0.287593 | 7_1:+57845891 | Msa1026210:CDS |
| TTGTGTCGTGTTGGAGTGTT+TGG | 0.292270 | 7_1:-57842912 | None:intergenic |
| TGCCACTTGCAGTCTTAATC+TGG | 0.293211 | 7_1:-57844979 | None:intergenic |
| TGATAAGAACTGCCGAAATT+AGG | 0.313654 | 7_1:+57845147 | Msa1026210:CDS |
| TTCAAAGAACAACAACAAAA+TGG | 0.319037 | 7_1:+57843060 | Msa1026210:CDS |
| TGACGAATGTTGGAAAATTT+GGG | 0.324646 | 7_1:+57843960 | Msa1026210:CDS |
| CTTGCAGTCTTAATCTGGTT+TGG | 0.345195 | 7_1:-57844974 | None:intergenic |
| CTGATCAAAGGAGAGATATT+AGG | 0.356827 | 7_1:+57845615 | Msa1026210:CDS |
| TGCCGCAACCAACCTAATTT+CGG | 0.360596 | 7_1:-57845159 | None:intergenic |
| GTGGCAAAAGGTGCTGCTTC+TGG | 0.361274 | 7_1:+57844996 | Msa1026210:CDS |
| CGCTTCTGCATACACTCTTC+TGG | 0.362210 | 7_1:-57845263 | None:intergenic |
| GCTTCGGTGGTGTTGGCTAC+TGG | 0.376012 | 7_1:+57843146 | Msa1026210:CDS |
| TTCTCCAGACTTGATACTAA+TGG | 0.384913 | 7_1:+57844776 | Msa1026210:CDS |
| GAGCAAACTGAGAAAGAAAA+TGG | 0.397534 | 7_1:+57845851 | Msa1026210:CDS |
| CCCTTTGTAGAGCTTCTTCA+AGG | 0.399161 | 7_1:-57845472 | None:intergenic |
| GATAGAGTCGGCTTTAAAAC+AGG | 0.402456 | 7_1:-57845683 | None:intergenic |
| TTTGGTTTAGCTCTTCTTCA+AGG | 0.406542 | 7_1:-57844956 | None:intergenic |
| AGTTCTGCTGTAACATCTAT+AGG | 0.410243 | 7_1:-57845023 | None:intergenic |
| ATCGGTTCTTCAAACTCTTC+TGG | 0.412083 | 7_1:-57845740 | None:intergenic |
| TTAAAGCCGACTCTATCAAT+AGG | 0.421757 | 7_1:+57845689 | Msa1026210:CDS |
| CAAATTCACTCACTTGAAGA+TGG | 0.431269 | 7_1:+57842988 | Msa1026210:exon |
| AATTCCATTAGTATCAAGTC+TGG | 0.436262 | 7_1:-57844780 | None:intergenic |
| CTGAATCAATATTGAATCTC+GGG | 0.436844 | 7_1:+57844637 | Msa1026210:CDS |
| GACGACGTATCAAGCTGAAC+CGG | 0.439494 | 7_1:+57843030 | Msa1026210:CDS |
| AAGAACTGATCTTAAAAGAA+AGG | 0.452126 | 7_1:+57844532 | Msa1026210:CDS |
| AAACAGCAGAAGGTGTCATT+AGG | 0.452154 | 7_1:+57845788 | Msa1026210:CDS |
| GCTTCTTTCACAGATTCAAA+TGG | 0.467986 | 7_1:-57843115 | None:intergenic |
| ATAAGAAACTAGAGAAAGAA+AGG | 0.469803 | 7_1:+57844877 | Msa1026210:CDS |
| GAGAGATGAAAGATTGTGAA+AGG | 0.470849 | 7_1:-57843173 | None:intergenic |
| TGTAGATGAGAAAGAAGTAA+AGG | 0.480056 | 7_1:+57844686 | Msa1026210:CDS |
| AATTCACATTCTACATCTCA+TGG | 0.482374 | 7_1:+57846882 | Msa1026210:CDS |
| TCTGAATCAATATTGAATCT+CGG | 0.485961 | 7_1:+57844636 | Msa1026210:CDS |
| AGAACTGATCTTAAAAGAAA+GGG | 0.491872 | 7_1:+57844533 | Msa1026210:CDS |
| ATATCTCTCCTTTGATCAGA+TGG | 0.492574 | 7_1:-57845611 | None:intergenic |
| AAGAATTAGAAAAGACCAAA+AGG | 0.492625 | 7_1:+57844574 | Msa1026210:CDS |
| AAAGAAGCTGTTAACCGCTT+CGG | 0.493823 | 7_1:+57843130 | Msa1026210:CDS |
| CAAGGAGAAACTAGAGGAGC+AGG | 0.495153 | 7_1:+57844494 | Msa1026210:CDS |
| CCTTGTCAAGCTCTTCTATG+TGG | 0.495621 | 7_1:-57844476 | None:intergenic |
| AGAGATGAAAGATTGTGAAA+GGG | 0.497699 | 7_1:-57843172 | None:intergenic |
| TTGAAGAGGCTTTAAGGAAG+TGG | 0.497849 | 7_1:+57845525 | Msa1026210:CDS |
| AGTCGGCTTTAAAACAGGCT+TGG | 0.498226 | 7_1:-57845678 | None:intergenic |
| TGCCGAAATTAGGTTGGTTG+CGG | 0.498655 | 7_1:+57845157 | Msa1026210:CDS |
| ATTCACCTCAAGTTCAGCAT+TGG | 0.505619 | 7_1:-57845965 | None:intergenic |
| AGGGAAGTTAGAAGTTGAAG+AGG | 0.506157 | 7_1:+57845511 | Msa1026210:CDS |
| GTTAACCGCTTCGGTGGTGT+TGG | 0.512875 | 7_1:+57843139 | Msa1026210:CDS |
| AGAGGAGCAGGCAAGAGCGT+TGG | 0.517338 | 7_1:+57844506 | Msa1026210:CDS |
| GGCATAGAACATTCCTTCAC+GGG | 0.519289 | 7_1:-57844741 | None:intergenic |
| GGGTTGAGGCTGCAGATAGA+GGG | 0.519601 | 7_1:+57845492 | Msa1026210:CDS |
| TGCTTCATCAACTTCAAGCA+TGG | 0.520566 | 7_1:-57845378 | None:intergenic |
| CAATAGGACAAATACTGAGC+AGG | 0.522093 | 7_1:+57845705 | Msa1026210:CDS |
| AGGGTTGAGGCTGCAGATAG+AGG | 0.522185 | 7_1:+57845491 | Msa1026210:CDS |
| GATACTAATGGAATTGAAGC+AGG | 0.525759 | 7_1:+57844788 | Msa1026210:CDS |
| TACTCTGACTCGTAAAGCTC+AGG | 0.530716 | 7_1:+57845319 | Msa1026210:CDS |
| TTAAGACTGCAAGTGGCAAA+AGG | 0.531244 | 7_1:+57844984 | Msa1026210:CDS |
| TGTGTCGTGTTGGAGTGTTT+GGG | 0.531540 | 7_1:-57842911 | None:intergenic |
| AATGTTGATTGCTTGTATTG+TGG | 0.534758 | 7_1:-57846825 | None:intergenic |
| GGATTGCCTACATGTTGAGT+TGG | 0.536457 | 7_1:-57846804 | None:intergenic |
| TGAAGCAAATTCTTCGCAGA+TGG | 0.539271 | 7_1:+57845394 | Msa1026210:CDS |
| TCAGTTTGCTCGTCAAACAA+TGG | 0.549642 | 7_1:-57845839 | None:intergenic |
| AAGAACTGCCGAAATTAGGT+TGG | 0.552434 | 7_1:+57845151 | Msa1026210:CDS |
| ATTTGTCCTATTGATAGAGT+CGG | 0.552627 | 7_1:-57845695 | None:intergenic |
| CGGCCTCTGAACTCAATCGA+TGG | 0.552819 | 7_1:-57845046 | None:intergenic |
| ACTCTGGTCCATCTGATCAA+AGG | 0.554367 | 7_1:+57845603 | Msa1026210:CDS |
| GAACCTCAGACGGACTCGAT+TGG | 0.556300 | 7_1:-57844713 | None:intergenic |
| TTTGAAGAACCGATGGTGCA+TGG | 0.559513 | 7_1:+57845749 | Msa1026210:CDS |
| TGATTGTAGATGACGAATGT+TGG | 0.559540 | 7_1:+57843950 | Msa1026210:CDS |
| AACCAGATTAAGACTGCAAG+TGG | 0.562004 | 7_1:+57844977 | Msa1026210:CDS |
| TTGTTCTTTGAAGATGAACC+CGG | 0.568935 | 7_1:-57843049 | None:intergenic |
| ACTCTTCTGGTGTATCCTCA+TGG | 0.571729 | 7_1:-57845250 | None:intergenic |
| ACAATACAAGCAATCAACAT+TGG | 0.572179 | 7_1:+57846827 | Msa1026210:CDS |
| CAATGCGTTAATTTCTGCAA+GGG | 0.572501 | 7_1:-57845222 | None:intergenic |
| TTAAGGAAGTGGCGATCTGA+CGG | 0.579749 | 7_1:+57845536 | Msa1026210:CDS |
| AGAAGTTCAAACCTGCAAGA+AGG | 0.580057 | 7_1:+57845448 | Msa1026210:CDS |
| AGGCATAGAACATTCCTTCA+CGG | 0.582187 | 7_1:-57844742 | None:intergenic |
| CCTTGAAGAAGCTCTACAAA+GGG | 0.582325 | 7_1:+57845472 | Msa1026210:CDS |
| GTGAAGATGTTGTGTCGTGT+TGG | 0.585533 | 7_1:-57842921 | None:intergenic |
| TTTGAAATCAAAGCTGCAGA+AGG | 0.585814 | 7_1:+57844608 | Msa1026210:CDS |
| GTGTCATTAGGTCATATGCT+TGG | 0.589947 | 7_1:+57845800 | Msa1026210:CDS |
| CCCTTGAAGAAGCTCTACAA+AGG | 0.590773 | 7_1:+57845471 | Msa1026210:CDS |
| TGTAGAATGTGAATTTCGAA+AGG | 0.590797 | 7_1:-57846874 | None:intergenic |
| ACGGGTTGAAGAACCTCAGA+CGG | 0.594605 | 7_1:-57844723 | None:intergenic |
| TGACAAAATCACAGTCGCAA+AGG | 0.594987 | 7_1:+57846762 | Msa1026210:intron |
| CCTTTGTAGAGCTTCTTCAA+GGG | 0.596110 | 7_1:-57845471 | None:intergenic |
| TGAGGTTCTTCAACCCGTGA+AGG | 0.596859 | 7_1:+57844728 | Msa1026210:CDS |
| ACAATGCGTTAATTTCTGCA+AGG | 0.601615 | 7_1:-57845223 | None:intergenic |
| AGAAACCAATGCTGAACTTG+AGG | 0.604096 | 7_1:+57845960 | Msa1026210:CDS |
| ACTATTTCTCCATGCACCAT+CGG | 0.609425 | 7_1:-57845758 | None:intergenic |
| ACGACGTATCAAGCTGAACC+GGG | 0.613614 | 7_1:+57843031 | Msa1026210:CDS |
| GGTTGCGGCAAGGAAAATGA+AGG | 0.614865 | 7_1:+57845172 | Msa1026210:CDS |
| AAATTAGGTTGGTTGCGGCA+AGG | 0.614952 | 7_1:+57845162 | Msa1026210:CDS |
| AGAAGCTCTACAAAGGGTTG+AGG | 0.617257 | 7_1:+57845478 | Msa1026210:CDS |
| GAAACACCAACTCAACATGT+AGG | 0.618579 | 7_1:+57846798 | Msa1026210:CDS |
| GAAGCTGTTAACCGCTTCGG+TGG | 0.621394 | 7_1:+57843133 | Msa1026210:CDS |
| AAACCAATCGAGTCCGTCTG+AGG | 0.623782 | 7_1:+57844710 | Msa1026210:CDS |
| TCGTAAAGCTCAGGCCGCAG+AGG | 0.635871 | 7_1:+57845328 | Msa1026210:CDS |
| AGAAGAGTTTGAAGAACCGA+TGG | 0.638252 | 7_1:+57845742 | Msa1026210:CDS |
| TCAAGTCTGGAGAAGATACA+CGG | 0.640414 | 7_1:-57844767 | None:intergenic |
| AGTCTCAGTGAAACAGCAGA+AGG | 0.650329 | 7_1:+57845778 | Msa1026210:CDS |
| CACTTGAGAAAACCCGTGAG+AGG | 0.664946 | 7_1:+57844904 | Msa1026210:CDS |
| AGTAGCCAACACCACCGAAG+CGG | 0.669268 | 7_1:-57843144 | None:intergenic |
| CCACATAGAAGAGCTTGACA+AGG | 0.669604 | 7_1:+57844476 | Msa1026210:CDS |
| ACTCCATCGATTGAGTTCAG+AGG | 0.670068 | 7_1:+57845043 | Msa1026210:CDS |
| CAAGTCTGGAGAAGATACAC+GGG | 0.678628 | 7_1:-57844766 | None:intergenic |
| GCTTGACAAGGAGAAACTAG+AGG | 0.679130 | 7_1:+57844488 | Msa1026210:CDS |
| TAACGCATTGTCTAGCCATG+AGG | 0.691726 | 7_1:+57845235 | Msa1026210:CDS |
| TCTGGAGAAGATACACGGGA+AGG | 0.691888 | 7_1:-57844762 | None:intergenic |
| AGAGTGTATGCAGAAGCGCG+AGG | 0.725141 | 7_1:+57845268 | Msa1026210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr7_1:57843261-57843280 | Msa1026210:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr7_1:57843262-57843281 | Msa1026210:intron | 0.0% |
| !!! | AATCTAATTTTTGATATATA+TGG | - | chr7_1:57844123-57844142 | None:intergenic | 10.0% |
| !!! | TTAAAATTCATAAGATTTTA+AGG | - | chr7_1:57846372-57846391 | None:intergenic | 10.0% |
| !!! | TTAAAATCTTATGAATTTTA+AGG | + | chr7_1:57846371-57846390 | Msa1026210:intron | 10.0% |
| !!! | ATTTGTTGCATTTTATTTTA+TGG | + | chr7_1:57843570-57843589 | Msa1026210:intron | 15.0% |
| !!! | TTTGTTGCATTTTATTTTAT+GGG | + | chr7_1:57843571-57843590 | Msa1026210:intron | 15.0% |
| !! | TATATATATACATAGAGAAA+TGG | + | chr7_1:57843746-57843765 | Msa1026210:intron | 15.0% |
| !!! | AATTGACATTTTTTCATTTT+GGG | - | chr7_1:57844183-57844202 | None:intergenic | 15.0% |
| !!! | GATTTTGTTTTCAAAATTTT+GGG | + | chr7_1:57844285-57844304 | Msa1026210:intron | 15.0% |
| !!! | ATTTTGTTTTCAAAATTTTG+GGG | + | chr7_1:57844286-57844305 | Msa1026210:intron | 15.0% |
| !!! | ATTTTGCTATACATTTTTTA+TGG | + | chr7_1:57846172-57846191 | Msa1026210:intron | 15.0% |
| !!! | ATCAAATTGATAAGATTTTA+AGG | - | chr7_1:57846447-57846466 | None:intergenic | 15.0% |
| !! | AAACTATTTGTGTGATTAAT+TGG | + | chr7_1:57843602-57843621 | Msa1026210:intron | 20.0% |
| !! | TTAACTTAACGTATATAGAA+TGG | - | chr7_1:57844046-57844065 | None:intergenic | 20.0% |
| !!! | GAATTGACATTTTTTCATTT+TGG | - | chr7_1:57844184-57844203 | None:intergenic | 20.0% |
| !!! | CGATTTTGTTTTCAAAATTT+TGG | + | chr7_1:57844284-57844303 | Msa1026210:intron | 20.0% |
| !!! | AAAGTATTGGTATAAGATAT+GGG | + | chr7_1:57844332-57844351 | Msa1026210:intron | 20.0% |
| !!! | TTTTAAAACTTCTGATTTTG+CGG | - | chr7_1:57845096-57845115 | None:intergenic | 20.0% |
| !!! | ATACATTTTTTATGGTATTC+AGG | + | chr7_1:57846180-57846199 | Msa1026210:intron | 20.0% |
| !! | TTATAACACTACTTACAATA+AGG | - | chr7_1:57846260-57846279 | None:intergenic | 20.0% |
| !!! | ACTTTTGGAAGAAAAAAAAT+CGG | + | chr7_1:57846653-57846672 | Msa1026210:intron | 20.0% |
| ! | TTCAAAGAACAACAACAAAA+TGG | + | chr7_1:57843060-57843079 | Msa1026210:CDS | 25.0% |
| ! | ATAAAAGACACATTCACAAA+AGG | - | chr7_1:57843353-57843372 | None:intergenic | 25.0% |
| !!! | AAAATTTTGTTTTGAGTGCT+AGG | + | chr7_1:57843685-57843704 | Msa1026210:intron | 25.0% |
| !!! | AAATTTTGTTTTGAGTGCTA+GGG | + | chr7_1:57843686-57843705 | Msa1026210:intron | 25.0% |
| !!! | GACTATCAAAATTTTGATAC+CGG | + | chr7_1:57843775-57843794 | Msa1026210:intron | 25.0% |
| ! | ATTGCAAATTTGATACATTC+AGG | - | chr7_1:57843828-57843847 | None:intergenic | 25.0% |
| !!! | ATTTTGATGTTCAGATAACA+CGG | + | chr7_1:57843926-57843945 | Msa1026210:intron | 25.0% |
| ! | TATAGTTACATTGTTTGTGA+AGG | + | chr7_1:57844010-57844029 | Msa1026210:intron | 25.0% |
| ! | GAAAACAAAATCGATATGTT+TGG | - | chr7_1:57844277-57844296 | None:intergenic | 25.0% |
| !! | TGATATGTATCTGAAAGTAT+TGG | + | chr7_1:57844319-57844338 | Msa1026210:intron | 25.0% |
| !!! | GAAAGTATTGGTATAAGATA+TGG | + | chr7_1:57844331-57844350 | Msa1026210:intron | 25.0% |
| ! | AAGAACTGATCTTAAAAGAA+AGG | + | chr7_1:57844532-57844551 | Msa1026210:CDS | 25.0% |
| ! | AGAACTGATCTTAAAAGAAA+GGG | + | chr7_1:57844533-57844552 | Msa1026210:CDS | 25.0% |
| ! | AAGAATTAGAAAAGACCAAA+AGG | + | chr7_1:57844574-57844593 | Msa1026210:CDS | 25.0% |
| ! | TCTGAATCAATATTGAATCT+CGG | + | chr7_1:57844636-57844655 | Msa1026210:CDS | 25.0% |
| ! | ATAAGAAACTAGAGAAAGAA+AGG | + | chr7_1:57844877-57844896 | Msa1026210:CDS | 25.0% |
| !!! | GCAGATGGATATTTTTAAAA+GGG | + | chr7_1:57845409-57845428 | Msa1026210:CDS | 25.0% |
| ! | TGTATGAAGTTTAAAAACTC+TGG | + | chr7_1:57845587-57845606 | Msa1026210:CDS | 25.0% |
| !!! | TGATGTAAATGGATTGAATT+TGG | + | chr7_1:57845643-57845662 | Msa1026210:CDS | 25.0% |
| ! | AAAATGTATAGCAAAATGCT+GGG | - | chr7_1:57846169-57846188 | None:intergenic | 25.0% |
| ! | AAAAATGTATAGCAAAATGC+TGG | - | chr7_1:57846170-57846189 | None:intergenic | 25.0% |
| ! | ACTTAGTTAATGTAAAACCA+GGG | - | chr7_1:57846213-57846232 | None:intergenic | 25.0% |
| ! | TACTTAGTTAATGTAAAACC+AGG | - | chr7_1:57846214-57846233 | None:intergenic | 25.0% |
| !! | TTCATTCTCTTATGTTTTCA+AGG | + | chr7_1:57846282-57846301 | Msa1026210:intron | 25.0% |
| !!! | CTTTTGGAAGAAAAAAAATC+GGG | + | chr7_1:57846654-57846673 | Msa1026210:intron | 25.0% |
| AAAAAAGAGAGAGATAGAAC+AGG | - | chr7_1:57842968-57842987 | None:intergenic | 30.0% | |
| AGAGATGAAAGATTGTGAAA+GGG | - | chr7_1:57843175-57843194 | None:intergenic | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr7_1:57843415-57843434 | None:intergenic | 30.0% | |
| AAAGTGAAAATCACACCTTA+AGG | + | chr7_1:57843450-57843469 | Msa1026210:intron | 30.0% | |
| ! | TTTTATCAAGCAACACCTTA+AGG | - | chr7_1:57843468-57843487 | None:intergenic | 30.0% |
| !!! | TTTTTTTACAAGACACCCTT+TGG | - | chr7_1:57843498-57843517 | None:intergenic | 30.0% |
| TCACACAAATAGTTTCAACT+AGG | - | chr7_1:57843597-57843616 | None:intergenic | 30.0% | |
| CTATTTGTGTGATTAATTGG+TGG | + | chr7_1:57843605-57843624 | Msa1026210:intron | 30.0% | |
| ATACATAGAGAAATGGTGTT+TGG | + | chr7_1:57843753-57843772 | Msa1026210:intron | 30.0% | |
| !! | TGCAATTTTGATGTCGAATA+TGG | + | chr7_1:57843842-57843861 | Msa1026210:intron | 30.0% |
| ATGACGAATGTTGGAAAATT+TGG | + | chr7_1:57843959-57843978 | Msa1026210:CDS | 30.0% | |
| TGACGAATGTTGGAAAATTT+GGG | + | chr7_1:57843960-57843979 | Msa1026210:CDS | 30.0% | |
| ACATTTGTGACATACATACT+AGG | - | chr7_1:57844151-57844170 | None:intergenic | 30.0% | |
| ! | ATCATAAAGTATCATCGAAG+AGG | + | chr7_1:57844247-57844266 | Msa1026210:intron | 30.0% |
| CTGAATCAATATTGAATCTC+GGG | + | chr7_1:57844637-57844656 | Msa1026210:CDS | 30.0% | |
| TGTAGATGAGAAAGAAGTAA+AGG | + | chr7_1:57844686-57844705 | Msa1026210:CDS | 30.0% | |
| AATTCCATTAGTATCAAGTC+TGG | - | chr7_1:57844783-57844802 | None:intergenic | 30.0% | |
| !!! | TATCATGAGTAGTTTTGGTT+AGG | - | chr7_1:57844824-57844843 | None:intergenic | 30.0% |
| ! | AGCAATATCATGAGTAGTTT+TGG | - | chr7_1:57844829-57844848 | None:intergenic | 30.0% |
| !! | AATTTTGAGTAAACCTCTCA+CGG | - | chr7_1:57844920-57844939 | None:intergenic | 30.0% |
| !!! | TCTCTTTTTTCTGAAATGCT+CGG | - | chr7_1:57845069-57845088 | None:intergenic | 30.0% |
| !! | CGCAGATGGATATTTTTAAA+AGG | + | chr7_1:57845408-57845427 | Msa1026210:CDS | 30.0% |
| !! | GGATATTTTTAAAAGGGTAG+AGG | + | chr7_1:57845415-57845434 | Msa1026210:CDS | 30.0% |
| ATTAGGCTACTTGATGTAAA+TGG | + | chr7_1:57845632-57845651 | Msa1026210:CDS | 30.0% | |
| ATTTGTCCTATTGATAGAGT+CGG | - | chr7_1:57845698-57845717 | None:intergenic | 30.0% | |
| TCTGCAAAGAGAAAGAAATT+TGG | + | chr7_1:57845890-57845909 | Msa1026210:CDS | 30.0% | |
| CTGCAAAGAGAAAGAAATTT+GGG | + | chr7_1:57845891-57845910 | Msa1026210:CDS | 30.0% | |
| AAATAAAAAACAGCACCTAG+GGG | - | chr7_1:57846054-57846073 | None:intergenic | 30.0% | |
| GAAATAAAAAACAGCACCTA+GGG | - | chr7_1:57846055-57846074 | None:intergenic | 30.0% | |
| TGAAATAAAAAACAGCACCT+AGG | - | chr7_1:57846056-57846075 | None:intergenic | 30.0% | |
| !! | TTCACTCTTTTTAGAGAAAC+TGG | + | chr7_1:57846072-57846091 | Msa1026210:intron | 30.0% |
| AAAGTATACTTTCAGAGACA+TGG | - | chr7_1:57846638-57846657 | None:intergenic | 30.0% | |
| !! | TGTCTCTGAAAGTATACTTT+TGG | + | chr7_1:57846638-57846657 | Msa1026210:intron | 30.0% |
| ! | AATGTTGATTGCTTGTATTG+TGG | - | chr7_1:57846828-57846847 | None:intergenic | 30.0% |
| ACAATACAAGCAATCAACAT+TGG | + | chr7_1:57846827-57846846 | Msa1026210:CDS | 30.0% | |
| TGTAGAATGTGAATTTCGAA+AGG | - | chr7_1:57846877-57846896 | None:intergenic | 30.0% | |
| AATTCACATTCTACATCTCA+TGG | + | chr7_1:57846882-57846901 | Msa1026210:CDS | 30.0% | |
| CAAATTCACTCACTTGAAGA+TGG | + | chr7_1:57842988-57843007 | Msa1026210:exon | 35.0% | |
| ! | TTGTTCTTTGAAGATGAACC+CGG | - | chr7_1:57843052-57843071 | None:intergenic | 35.0% |
| GCTTCTTTCACAGATTCAAA+TGG | - | chr7_1:57843118-57843137 | None:intergenic | 35.0% | |
| GAGAGATGAAAGATTGTGAA+AGG | - | chr7_1:57843176-57843195 | None:intergenic | 35.0% | |
| ATCTCTCACTTCTCATTCTA+AGG | + | chr7_1:57843189-57843208 | Msa1026210:CDS | 35.0% | |
| ! | ACACCAACTTCCTTTTATGA+AGG | + | chr7_1:57843402-57843421 | Msa1026210:intron | 35.0% |
| ACACCTTCATAAAAGGAAGT+TGG | - | chr7_1:57843408-57843427 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr7_1:57843479-57843498 | Msa1026210:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr7_1:57843480-57843499 | Msa1026210:intron | 35.0% | |
| !! | TTTTGAGTGCTAGGGTTTTT+AGG | + | chr7_1:57843694-57843713 | Msa1026210:intron | 35.0% |
| TGATTGTAGATGACGAATGT+TGG | + | chr7_1:57843950-57843969 | Msa1026210:CDS | 35.0% | |
| ! | CAAATCTTCAACAAGCCTTT+TGG | - | chr7_1:57844592-57844611 | None:intergenic | 35.0% |
| ! | TTTGAAATCAAAGCTGCAGA+AGG | + | chr7_1:57844608-57844627 | Msa1026210:CDS | 35.0% |
| TTCTCCAGACTTGATACTAA+TGG | + | chr7_1:57844776-57844795 | Msa1026210:CDS | 35.0% | |
| GATACTAATGGAATTGAAGC+AGG | + | chr7_1:57844788-57844807 | Msa1026210:CDS | 35.0% | |
| !!! | AGTTTTGGTTAGGTTCAACT+TGG | - | chr7_1:57844814-57844833 | None:intergenic | 35.0% |
| !! | ATTTTGAGTAAACCTCTCAC+GGG | - | chr7_1:57844919-57844938 | None:intergenic | 35.0% |
| !! | TTTGGTTTAGCTCTTCTTCA+AGG | - | chr7_1:57844959-57844978 | None:intergenic | 35.0% |
| AGTTCTGCTGTAACATCTAT+AGG | - | chr7_1:57845026-57845045 | None:intergenic | 35.0% | |
| TGATAAGAACTGCCGAAATT+AGG | + | chr7_1:57845147-57845166 | Msa1026210:CDS | 35.0% | |
| CAATGCGTTAATTTCTGCAA+GGG | - | chr7_1:57845225-57845244 | None:intergenic | 35.0% | |
| ACAATGCGTTAATTTCTGCA+AGG | - | chr7_1:57845226-57845245 | None:intergenic | 35.0% | |
| !! | CTTTTTCATTTGTTCCTCTG+CGG | - | chr7_1:57845345-57845364 | None:intergenic | 35.0% |
| TAGAAGTTGAAGAGGCTTTA+AGG | + | chr7_1:57845519-57845538 | Msa1026210:CDS | 35.0% | |
| ATATCTCTCCTTTGATCAGA+TGG | - | chr7_1:57845614-57845633 | None:intergenic | 35.0% | |
| CTGATCAAAGGAGAGATATT+AGG | + | chr7_1:57845615-57845634 | Msa1026210:CDS | 35.0% | |
| ! | TTAAAGCCGACTCTATCAAT+AGG | + | chr7_1:57845689-57845708 | Msa1026210:CDS | 35.0% |
| GAGCAAACTGAGAAAGAAAA+TGG | + | chr7_1:57845851-57845870 | Msa1026210:CDS | 35.0% | |
| TTTAGAGAAACTGGAATGCA+TGG | + | chr7_1:57846081-57846100 | Msa1026210:intron | 35.0% | |
| !!! | CAAACGAACTTGCTTTTTTC+AGG | - | chr7_1:57846493-57846512 | None:intergenic | 35.0% |
| ACTATCTAATATGTGCATGC+AGG | + | chr7_1:57846533-57846552 | Msa1026210:intron | 35.0% | |
| CTATCTAATATGTGCATGCA+GGG | + | chr7_1:57846534-57846553 | Msa1026210:intron | 35.0% | |
| AATCCTTGTCTTGCTTATCT+TGG | - | chr7_1:57846571-57846590 | None:intergenic | 35.0% | |
| !!! | ATGGGTTTTTTTTAGGACCT+GGG | - | chr7_1:57846615-57846634 | None:intergenic | 35.0% |
| !!! | GACATGGATGGGTTTTTTTT+AGG | - | chr7_1:57846622-57846641 | None:intergenic | 35.0% |
| ATACTTTCAGAGACATGGAT+GGG | - | chr7_1:57846633-57846652 | None:intergenic | 35.0% | |
| TATACTTTCAGAGACATGGA+TGG | - | chr7_1:57846634-57846653 | None:intergenic | 35.0% | |
| ! | TCTGAAAGTATACTTCCGAA+GGG | + | chr7_1:57846683-57846702 | Msa1026210:intron | 35.0% |
| ! | ATAAGAGTCTTTTTGCCCTT+CGG | - | chr7_1:57846701-57846720 | None:intergenic | 35.0% |
| AAAGAAGCTGTTAACCGCTT+CGG | + | chr7_1:57843130-57843149 | Msa1026210:CDS | 40.0% | |
| ! | TTTTACAAGACACCCTTTGG+TGG | - | chr7_1:57843495-57843514 | None:intergenic | 40.0% |
| ! | GTGTGATTAATTGGTGGCTT+TGG | + | chr7_1:57843611-57843630 | Msa1026210:intron | 40.0% |
| TGTGTGTGAATTGTCACGTA+CGG | + | chr7_1:57843896-57843915 | Msa1026210:intron | 40.0% | |
| GACCAACTGTCATGAAAATC+TGG | + | chr7_1:57844360-57844379 | Msa1026210:intron | 40.0% | |
| ! | TGCCAGATTTTCATGACAGT+TGG | - | chr7_1:57844365-57844384 | None:intergenic | 40.0% |
| AGGCATAGAACATTCCTTCA+CGG | - | chr7_1:57844745-57844764 | None:intergenic | 40.0% | |
| TCAAGTCTGGAGAAGATACA+CGG | - | chr7_1:57844770-57844789 | None:intergenic | 40.0% | |
| CTTGCAGTCTTAATCTGGTT+TGG | - | chr7_1:57844977-57844996 | None:intergenic | 40.0% | |
| AACCAGATTAAGACTGCAAG+TGG | + | chr7_1:57844977-57844996 | Msa1026210:CDS | 40.0% | |
| TTAAGACTGCAAGTGGCAAA+AGG | + | chr7_1:57844984-57845003 | Msa1026210:CDS | 40.0% | |
| AAGAACTGCCGAAATTAGGT+TGG | + | chr7_1:57845151-57845170 | Msa1026210:CDS | 40.0% | |
| TGCTTCATCAACTTCAAGCA+TGG | - | chr7_1:57845381-57845400 | None:intergenic | 40.0% | |
| TGAAGCAAATTCTTCGCAGA+TGG | + | chr7_1:57845394-57845413 | Msa1026210:CDS | 40.0% | |
| AGAAGTTCAAACCTGCAAGA+AGG | + | chr7_1:57845448-57845467 | Msa1026210:CDS | 40.0% | |
| CCTTTGTAGAGCTTCTTCAA+GGG | - | chr7_1:57845474-57845493 | None:intergenic | 40.0% | |
| CCTTGAAGAAGCTCTACAAA+GGG | + | chr7_1:57845472-57845491 | Msa1026210:CDS | 40.0% | |
| AGGGAAGTTAGAAGTTGAAG+AGG | + | chr7_1:57845511-57845530 | Msa1026210:CDS | 40.0% | |
| !! | TTGAAGAGGCTTTAAGGAAG+TGG | + | chr7_1:57845525-57845544 | Msa1026210:CDS | 40.0% |
| !! | GATAGAGTCGGCTTTAAAAC+AGG | - | chr7_1:57845686-57845705 | None:intergenic | 40.0% |
| CAATAGGACAAATACTGAGC+AGG | + | chr7_1:57845705-57845724 | Msa1026210:CDS | 40.0% | |
| ! | ATCGGTTCTTCAAACTCTTC+TGG | - | chr7_1:57845743-57845762 | None:intergenic | 40.0% |
| AGAAGAGTTTGAAGAACCGA+TGG | + | chr7_1:57845742-57845761 | Msa1026210:CDS | 40.0% | |
| ! | ACTATTTCTCCATGCACCAT+CGG | - | chr7_1:57845761-57845780 | None:intergenic | 40.0% |
| !! | AAACAGCAGAAGGTGTCATT+AGG | + | chr7_1:57845788-57845807 | Msa1026210:CDS | 40.0% |
| ! | GTGTCATTAGGTCATATGCT+TGG | + | chr7_1:57845800-57845819 | Msa1026210:CDS | 40.0% |
| ! | TCAGTTTGCTCGTCAAACAA+TGG | - | chr7_1:57845842-57845861 | None:intergenic | 40.0% |
| AGAAACCAATGCTGAACTTG+AGG | + | chr7_1:57845960-57845979 | Msa1026210:CDS | 40.0% | |
| ATTCACCTCAAGTTCAGCAT+TGG | - | chr7_1:57845968-57845987 | None:intergenic | 40.0% | |
| TAGCTCTTGTCATTGGTAGA+TGG | - | chr7_1:57846015-57846034 | None:intergenic | 40.0% | |
| !! | TTGAGTCTAGCTCTTGTCAT+TGG | - | chr7_1:57846022-57846041 | None:intergenic | 40.0% |
| !!! | TGGGTTTTTTTTAGGACCTG+GGG | - | chr7_1:57846614-57846633 | None:intergenic | 40.0% |
| !!! | GATGGGTTTTTTTTAGGACC+TGG | - | chr7_1:57846616-57846635 | None:intergenic | 40.0% |
| ! | GTCTGAAAGTATACTTCCGA+AGG | + | chr7_1:57846682-57846701 | Msa1026210:intron | 40.0% |
| TGACAAAATCACAGTCGCAA+AGG | + | chr7_1:57846762-57846781 | Msa1026210:intron | 40.0% | |
| GAAACACCAACTCAACATGT+AGG | + | chr7_1:57846798-57846817 | Msa1026210:CDS | 40.0% | |
| ! | TGTGTCGTGTTGGAGTGTTT+GGG | - | chr7_1:57842914-57842933 | None:intergenic | 45.0% |
| ! | TTGTGTCGTGTTGGAGTGTT+TGG | - | chr7_1:57842915-57842934 | None:intergenic | 45.0% |
| GTGAAGATGTTGTGTCGTGT+TGG | - | chr7_1:57842924-57842943 | None:intergenic | 45.0% | |
| CGACAACGTCTTACACATTC+CGG | - | chr7_1:57843797-57843816 | None:intergenic | 45.0% | |
| !! | TGGTGCTGCAAACAAACAAG+AGG | - | chr7_1:57844459-57844478 | None:intergenic | 45.0% |
| CCTTGTCAAGCTCTTCTATG+TGG | - | chr7_1:57844479-57844498 | None:intergenic | 45.0% | |
| CCACATAGAAGAGCTTGACA+AGG | + | chr7_1:57844476-57844495 | Msa1026210:CDS | 45.0% | |
| GCTTGACAAGGAGAAACTAG+AGG | + | chr7_1:57844488-57844507 | Msa1026210:CDS | 45.0% | |
| GGCATAGAACATTCCTTCAC+GGG | - | chr7_1:57844744-57844763 | None:intergenic | 45.0% | |
| CAAGTCTGGAGAAGATACAC+GGG | - | chr7_1:57844769-57844788 | None:intergenic | 45.0% | |
| ! | TGCCACTTGCAGTCTTAATC+TGG | - | chr7_1:57844982-57845001 | None:intergenic | 45.0% |
| ! | ACTCCATCGATTGAGTTCAG+AGG | + | chr7_1:57845043-57845062 | Msa1026210:CDS | 45.0% |
| !! | TGCCGAAATTAGGTTGGTTG+CGG | + | chr7_1:57845157-57845176 | Msa1026210:CDS | 45.0% |
| TGCCGCAACCAACCTAATTT+CGG | - | chr7_1:57845162-57845181 | None:intergenic | 45.0% | |
| !! | AAATTAGGTTGGTTGCGGCA+AGG | + | chr7_1:57845162-57845181 | Msa1026210:CDS | 45.0% |
| TAACGCATTGTCTAGCCATG+AGG | + | chr7_1:57845235-57845254 | Msa1026210:CDS | 45.0% | |
| ACTCTTCTGGTGTATCCTCA+TGG | - | chr7_1:57845253-57845272 | None:intergenic | 45.0% | |
| ! | TACTCTGACTCGTAAAGCTC+AGG | + | chr7_1:57845319-57845338 | Msa1026210:CDS | 45.0% |
| CCCTTGAAGAAGCTCTACAA+AGG | + | chr7_1:57845471-57845490 | Msa1026210:CDS | 45.0% | |
| CCCTTTGTAGAGCTTCTTCA+AGG | - | chr7_1:57845475-57845494 | None:intergenic | 45.0% | |
| AGAAGCTCTACAAAGGGTTG+AGG | + | chr7_1:57845478-57845497 | Msa1026210:CDS | 45.0% | |
| TTAAGGAAGTGGCGATCTGA+CGG | + | chr7_1:57845536-57845555 | Msa1026210:CDS | 45.0% | |
| ACTCTGGTCCATCTGATCAA+AGG | + | chr7_1:57845603-57845622 | Msa1026210:CDS | 45.0% | |
| !! | AGTCGGCTTTAAAACAGGCT+TGG | - | chr7_1:57845681-57845700 | None:intergenic | 45.0% |
| TTTGAAGAACCGATGGTGCA+TGG | + | chr7_1:57845749-57845768 | Msa1026210:CDS | 45.0% | |
| AGTCTCAGTGAAACAGCAGA+AGG | + | chr7_1:57845778-57845797 | Msa1026210:CDS | 45.0% | |
| ACTCAAAAGTAGCATCCCCT+AGG | + | chr7_1:57846036-57846055 | Msa1026210:intron | 45.0% | |
| GAAAACTGAGAGCTTCTGTG+TGG | + | chr7_1:57846413-57846432 | Msa1026210:intron | 45.0% | |
| CTAATATGTGCATGCAGGGT+TGG | + | chr7_1:57846538-57846557 | Msa1026210:intron | 45.0% | |
| ! | GTCTTGCTTATCTTGGCCTT+AGG | - | chr7_1:57846564-57846583 | None:intergenic | 45.0% |
| AGGCCAAGATAAGCAAGACA+AGG | + | chr7_1:57846565-57846584 | Msa1026210:intron | 45.0% | |
| !!! | GTTTTTTTTAGGACCTGGGG+TGG | - | chr7_1:57846611-57846630 | None:intergenic | 45.0% |
| GGATTGCCTACATGTTGAGT+TGG | - | chr7_1:57846807-57846826 | None:intergenic | 45.0% | |
| !! | TACATATATATATATATATA+GGG | - | chr7_1:57843521-57843540 | None:intergenic | 5.0% |
| !! | ATACATATATATATATATAT+AGG | - | chr7_1:57843522-57843541 | None:intergenic | 5.0% |
| GACGACGTATCAAGCTGAAC+CGG | + | chr7_1:57843030-57843049 | Msa1026210:CDS | 50.0% | |
| ACGACGTATCAAGCTGAACC+GGG | + | chr7_1:57843031-57843050 | Msa1026210:CDS | 50.0% | |
| CAAGGAGAAACTAGAGGAGC+AGG | + | chr7_1:57844494-57844513 | Msa1026210:CDS | 50.0% | |
| AAACCAATCGAGTCCGTCTG+AGG | + | chr7_1:57844710-57844729 | Msa1026210:CDS | 50.0% | |
| ! | ACGGGTTGAAGAACCTCAGA+CGG | - | chr7_1:57844726-57844745 | None:intergenic | 50.0% |
| TGAGGTTCTTCAACCCGTGA+AGG | + | chr7_1:57844728-57844747 | Msa1026210:CDS | 50.0% | |
| TCTGGAGAAGATACACGGGA+AGG | - | chr7_1:57844765-57844784 | None:intergenic | 50.0% | |
| CACTTGAGAAAACCCGTGAG+AGG | + | chr7_1:57844904-57844923 | Msa1026210:CDS | 50.0% | |
| GGTTGCGGCAAGGAAAATGA+AGG | + | chr7_1:57845172-57845191 | Msa1026210:CDS | 50.0% | |
| CGCTTCTGCATACACTCTTC+TGG | - | chr7_1:57845266-57845285 | None:intergenic | 50.0% | |
| TTCTTCAAGGGCCTTCTTGC+AGG | - | chr7_1:57845462-57845481 | None:intergenic | 50.0% | |
| GGCGATCTGACGGTCAAAAA+AGG | + | chr7_1:57845546-57845565 | Msa1026210:CDS | 50.0% | |
| !!! | GAGCTTCTTTTTTCCACCCC+AGG | + | chr7_1:57846595-57846614 | Msa1026210:intron | 50.0% |
| GAAGCTGTTAACCGCTTCGG+TGG | + | chr7_1:57843133-57843152 | Msa1026210:CDS | 55.0% | |
| GTTAACCGCTTCGGTGGTGT+TGG | + | chr7_1:57843139-57843158 | Msa1026210:CDS | 55.0% | |
| AGTAGCCAACACCACCGAAG+CGG | - | chr7_1:57843147-57843166 | None:intergenic | 55.0% | |
| ! | GAACCTCAGACGGACTCGAT+TGG | - | chr7_1:57844716-57844735 | None:intergenic | 55.0% |
| !! | GTGGCAAAAGGTGCTGCTTC+TGG | + | chr7_1:57844996-57845015 | Msa1026210:CDS | 55.0% |
| CGGCCTCTGAACTCAATCGA+TGG | - | chr7_1:57845049-57845068 | None:intergenic | 55.0% | |
| ! | AGAGTGTATGCAGAAGCGCG+AGG | + | chr7_1:57845268-57845287 | Msa1026210:CDS | 55.0% |
| AGGGTTGAGGCTGCAGATAG+AGG | + | chr7_1:57845491-57845510 | Msa1026210:CDS | 55.0% | |
| GGGTTGAGGCTGCAGATAGA+GGG | + | chr7_1:57845492-57845511 | Msa1026210:CDS | 55.0% | |
| !! | GGTATTCAGGTTGCAGTCCC+TGG | + | chr7_1:57846193-57846212 | Msa1026210:intron | 55.0% |
| !! | GCTTCGGTGGTGTTGGCTAC+TGG | + | chr7_1:57843146-57843165 | Msa1026210:CDS | 60.0% |
| ! | AGAGGAGCAGGCAAGAGCGT+TGG | + | chr7_1:57844506-57844525 | Msa1026210:CDS | 60.0% |
| TCGTAAAGCTCAGGCCGCAG+AGG | + | chr7_1:57845328-57845347 | Msa1026210:CDS | 60.0% | |
| !! | GTGCATGCAGGGTTGGCCTA+AGG | + | chr7_1:57846545-57846564 | Msa1026210:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 57842903 | 57846938 | 57842903 | ID=Msa1026210;Name=Msa1026210 |
| chr7_1 | mRNA | 57842903 | 57846938 | 57842903 | ID=Msa1026210-mRNA-1;Parent=Msa1026210;Name=Msa1026210-mRNA-1;_AED=0.09;_eAED=0.09;_QI=104|0|0.25|0.5|1|1|4|0|639 |
| chr7_1 | exon | 57842903 | 57843210 | 57842903 | ID=Msa1026210-mRNA-1:exon:11545;Parent=Msa1026210-mRNA-1 |
| chr7_1 | exon | 57843940 | 57843984 | 57843940 | ID=Msa1026210-mRNA-1:exon:11546;Parent=Msa1026210-mRNA-1 |
| chr7_1 | exon | 57844474 | 57845981 | 57844474 | ID=Msa1026210-mRNA-1:exon:11547;Parent=Msa1026210-mRNA-1 |
| chr7_1 | exon | 57846776 | 57846938 | 57846776 | ID=Msa1026210-mRNA-1:exon:11548;Parent=Msa1026210-mRNA-1 |
| chr7_1 | five_prime_UTR | 57842903 | 57843006 | 57842903 | ID=Msa1026210-mRNA-1:five_prime_utr;Parent=Msa1026210-mRNA-1 |
| chr7_1 | CDS | 57843007 | 57843210 | 57843007 | ID=Msa1026210-mRNA-1:cds;Parent=Msa1026210-mRNA-1 |
| chr7_1 | CDS | 57843940 | 57843984 | 57843940 | ID=Msa1026210-mRNA-1:cds;Parent=Msa1026210-mRNA-1 |
| chr7_1 | CDS | 57844474 | 57845981 | 57844474 | ID=Msa1026210-mRNA-1:cds;Parent=Msa1026210-mRNA-1 |
| chr7_1 | CDS | 57846776 | 57846938 | 57846776 | ID=Msa1026210-mRNA-1:cds;Parent=Msa1026210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
