AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0751570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751570 MtrunA17_Chr5g0394391 96.497 314 11 0 38 351 259 572 0.0 624
Msa0751570 MtrunA17_Chr5g0442171 82.955 264 37 2 35 297 67 323 4.44e-155 438
Msa0751570 MtrunA17_Chr4g0064621 66.463 328 101 4 27 350 368 690 1.33e-136 404
Msa0751570 MtrunA17_Chr4g0060241 58.228 316 111 9 38 348 246 545 2.53e-107 325
Msa0751570 MtrunA17_Chr4g0031321 39.068 279 154 5 32 302 226 496 3.92e-58 199
Msa0751570 MtrunA17_Chr4g0031301 39.068 279 154 5 32 302 226 496 4.67e-58 198
Msa0751570 MtrunA17_Chr7g0223181 39.068 279 154 5 32 302 226 496 7.32e-58 198
Msa0751570 MtrunA17_Chr4g0073741 38.043 276 161 4 32 302 225 495 1.04e-57 197
Msa0751570 MtrunA17_Chr7g0223291 39.068 279 154 5 32 302 226 496 1.88e-57 197
Msa0751570 MtrunA17_Chr7g0262821 38.710 279 155 5 32 302 226 496 6.68e-57 195
Msa0751570 MtrunA17_Chr2g0298851 37.113 291 169 6 29 309 218 504 1.22e-49 175
Msa0751570 MtrunA17_Chr7g0223831 38.305 295 159 9 29 309 190 475 2.89e-48 171
Msa0751570 MtrunA17_Chr7g0223621 33.439 314 196 6 28 336 224 529 5.12e-48 171
Msa0751570 MtrunA17_Chr8g0350731 35.088 285 170 7 32 310 256 531 1.11e-47 171
Msa0751570 MtrunA17_Chr8g0388761 35.357 280 170 5 27 302 250 522 1.61e-47 170
Msa0751570 MtrunA17_Chr8g0388671 35.955 267 163 4 40 302 260 522 1.87e-47 170
Msa0751570 MtrunA17_Chr7g0223711 36.594 276 163 5 32 302 228 496 2.07e-47 169
Msa0751570 MtrunA17_Chr7g0233311 37.500 272 167 2 40 310 236 505 3.36e-47 169
Msa0751570 MtrunA17_Chr7g0223631 36.301 292 173 6 32 318 214 497 4.33e-47 168
Msa0751570 MtrunA17_Chr4g0064651 67.480 123 40 0 174 296 1 123 4.40e-47 155
Msa0751570 MtrunA17_Chr2g0293581 36.823 277 162 5 32 302 229 498 1.21e-45 164
Msa0751570 MtrunA17_Chr2g0296391 35.563 284 170 5 32 309 228 504 3.86e-45 162
Msa0751570 MtrunA17_Chr7g0223721 34.130 293 174 6 29 309 218 503 5.61e-45 162
Msa0751570 MtrunA17_Chr7g0223851 36.071 280 173 5 32 309 237 512 1.20e-44 162
Msa0751570 MtrunA17_Chr7g0223541 36.823 277 161 6 32 302 185 453 1.49e-44 161
Msa0751570 MtrunA17_Chr7g0223751 33.784 296 183 6 28 318 224 511 1.51e-44 161
Msa0751570 MtrunA17_Chr2g0287631 37.324 284 165 5 32 309 228 504 1.79e-44 161
Msa0751570 MtrunA17_Chr7g0223681 34.926 272 172 4 32 302 139 406 4.64e-44 159
Msa0751570 MtrunA17_Chr2g0298861 33.788 293 178 7 29 310 229 516 7.04e-44 160
Msa0751570 MtrunA17_Chr7g0223801 33.449 287 182 6 32 314 227 508 2.70e-43 158
Msa0751570 MtrunA17_Chr5g0427901 35.740 277 164 6 32 302 239 507 3.33e-43 158
Msa0751570 MtrunA17_Chr2g0284681 33.333 282 172 5 32 302 225 501 3.39e-43 157
Msa0751570 MtrunA17_Chr8g0390821 34.122 296 180 7 20 309 255 541 1.16e-42 156
Msa0751570 MtrunA17_Chr7g0223781 32.704 318 195 6 27 333 223 532 1.18e-42 156
Msa0751570 MtrunA17_Chr7g0221661 36.940 268 157 5 40 302 236 496 1.99e-42 155
Msa0751570 MtrunA17_Chr4g0012541 35.231 281 174 6 32 309 219 494 2.11e-42 155
Msa0751570 MtrunA17_Chr2g0279901 33.824 272 161 5 40 302 272 533 3.25e-42 155
Msa0751570 MtrunA17_Chr7g0223741 34.058 276 170 5 40 310 236 504 5.94e-42 154
Msa0751570 MtrunA17_Chr7g0223731 34.296 277 167 7 40 310 236 503 1.75e-41 153
Msa0751570 MtrunA17_Chr7g0245531 39.234 209 122 3 107 314 1 205 2.01e-41 147
Msa0751570 MtrunA17_Chr4g0049501 33.088 272 163 5 40 302 270 531 3.33e-41 152
Msa0751570 MtrunA17_Chr7g0248151 37.276 279 157 9 32 302 228 496 1.13e-40 150
Msa0751570 MtrunA17_Chr7g0215261 34.915 295 153 9 29 309 200 469 1.15e-40 150
Msa0751570 MtrunA17_Chr7g0225671 35.254 295 167 10 29 309 225 509 2.46e-40 150
Msa0751570 MtrunA17_Chr7g0223031 33.935 277 168 7 40 310 236 503 2.61e-39 147
Msa0751570 MtrunA17_Chr7g0217971 32.646 291 189 5 21 309 193 478 2.80e-39 146
Msa0751570 MtrunA17_Chr6g0462601 32.270 282 180 6 26 302 220 495 3.87e-39 146
Msa0751570 MtrunA17_Chr6g0462611 32.482 274 180 3 28 300 172 441 3.99e-39 146
Msa0751570 MtrunA17_Chr7g0223821 35.473 296 165 10 29 308 218 503 4.96e-39 147
Msa0751570 MtrunA17_Chr7g0248131 35.125 279 163 9 32 302 230 498 1.86e-38 144
Msa0751570 MtrunA17_Chr6g0462681 32.000 275 182 4 28 300 222 493 1.23e-37 142
Msa0751570 MtrunA17_Chr4g0040931 32.491 277 173 6 32 302 228 496 1.61e-37 142
Msa0751570 MtrunA17_Chr2g0277021 33.916 286 165 9 27 302 279 550 1.69e-36 139
Msa0751570 MtrunA17_Chr7g0233301 34.182 275 145 5 38 310 234 474 5.76e-36 137
Msa0751570 MtrunA17_Chr7g0223701 32.258 279 179 5 32 302 228 504 6.87e-35 134
Msa0751570 MtrunA17_Chr6g0462711 31.985 272 167 7 40 300 236 500 2.48e-34 133
Msa0751570 MtrunA17_Chr1g0152001 38.021 192 112 5 119 309 2 187 2.70e-34 128
Msa0751570 MtrunA17_Chr6g0462771 30.224 268 177 5 40 300 234 498 1.26e-33 131
Msa0751570 MtrunA17_Chr6g0462641 31.365 271 170 7 40 300 234 498 4.24e-31 124
Msa0751570 MtrunA17_Chr1g0188611 36.216 185 113 3 127 310 3 183 1.50e-28 112
Msa0751570 MtrunA17_Chr2g0293601 30.545 275 144 7 32 300 228 461 2.48e-28 115
Msa0751570 MtrunA17_Chr4g0057741 60.227 88 33 1 38 123 26 113 1.46e-27 104
Msa0751570 MtrunA17_Chr7g0223761 33.161 193 117 6 49 235 7 193 2.72e-26 107
Msa0751570 MtrunA17_Chr6g0462861 29.545 264 174 5 38 300 221 473 1.34e-25 107
Msa0751570 MtrunA17_Chr2g0331381 29.577 284 152 7 32 310 199 439 2.34e-25 106
Msa0751570 MtrunA17_Chr5g0394221 31.863 204 131 3 108 309 75 272 5.38e-25 103
Msa0751570 MtrunA17_Chr1g0166551 28.517 263 142 6 40 300 160 378 5.30e-23 99.8
Msa0751570 MtrunA17_Chr5g0442181 85.106 47 7 0 305 351 1 47 9.10e-22 87.0
Msa0751570 MtrunA17_Chr2g0299791 33.333 162 97 4 38 193 1263 1419 1.53e-21 96.3
Msa0751570 MtrunA17_Chr2g0299851 34.177 158 95 4 40 192 1261 1414 3.26e-20 92.4
Msa0751570 MtrunA17_Chr2g0299821 28.395 243 144 8 40 265 236 465 5.49e-20 90.9
Msa0751570 MtrunA17_Chr6g0462691 36.232 138 87 1 130 267 6 142 3.07e-19 83.6
Msa0751570 MtrunA17_Chr2g0299921 31.707 164 103 3 32 190 1244 1403 1.64e-18 87.4
Msa0751570 MtrunA17_Chr2g0299921 31.579 152 95 3 32 178 1629 1776 3.36e-16 80.1
Msa0751570 MtrunA17_Chr7g0245541 46.667 90 47 1 225 314 4 92 2.70e-17 79.3
Msa0751570 MtrunA17_Chr2g0299881 32.500 160 97 4 40 193 1265 1419 1.09e-16 81.6
Msa0751570 MtrunA17_Chr2g0293561 31.507 146 99 1 32 176 228 373 5.52e-16 78.6
Msa0751570 MtrunA17_Chr2g0293271 28.111 217 103 5 53 262 239 409 4.36e-13 69.7
Msa0751570 MtrunA17_Chr6g0462751 28.758 153 105 3 64 215 152 301 7.75e-13 68.6
Msa0751570 MtrunA17_Chr4g0046871 38.000 100 58 2 142 240 9 105 1.56e-12 63.5
Msa0751570 MtrunA17_Chr6g0462631 23.834 193 127 3 28 219 122 295 4.14e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0751570 AT2G32120.1 66.134 313 95 1 38 350 260 561 6.96e-156 449
Msa0751570 AT2G32120.2 66.134 313 95 1 38 350 260 561 6.96e-156 449
Msa0751570 AT5G02500.1 39.068 279 154 5 32 302 226 496 1.04e-58 201
Msa0751570 AT3G12580.1 39.068 279 154 5 32 302 226 496 3.87e-58 199
Msa0751570 AT3G09440.1 39.427 279 153 5 32 302 226 496 4.58e-57 196
Msa0751570 AT3G09440.4 39.427 279 153 5 32 302 226 496 4.58e-57 196
Msa0751570 AT3G09440.2 39.427 279 153 5 32 302 226 496 4.58e-57 196
Msa0751570 AT3G09440.3 39.427 279 153 5 32 302 226 496 4.58e-57 196
Msa0751570 AT1G56410.1 38.710 279 155 5 32 302 226 496 1.93e-55 191
Msa0751570 AT5G02490.1 37.276 279 159 5 32 302 226 496 8.22e-54 187
Msa0751570 AT1G16030.1 36.029 272 172 2 32 302 225 495 1.58e-53 187
Msa0751570 AT1G09080.2 35.379 277 174 3 27 302 253 525 1.93e-47 170
Msa0751570 AT1G09080.1 35.379 277 174 3 27 302 263 535 2.19e-47 170
Msa0751570 AT5G42020.1 34.296 277 177 3 27 302 249 521 1.00e-46 168
Msa0751570 AT5G42020.3 34.296 277 177 3 27 302 254 526 1.17e-46 168
Msa0751570 AT5G28540.1 34.657 277 176 3 27 302 249 521 2.04e-46 167
Msa0751570 AT5G42020.2 34.672 274 173 4 27 298 249 518 2.92e-45 164
Msa0751570 AT5G09590.1 32.601 273 163 5 40 302 276 537 1.16e-39 149
Msa0751570 AT5G49910.1 33.333 285 168 8 27 302 288 559 7.41e-36 138
Msa0751570 AT4G37910.1 33.574 277 155 6 40 302 271 532 8.94e-36 138
Msa0751570 AT4G37910.2 33.574 277 155 6 40 302 271 532 8.94e-36 138
Msa0751570 AT4G24280.1 33.916 286 165 9 27 302 288 559 1.76e-35 137
Msa0751570 AT5G02500.2 33.533 167 102 3 32 193 226 388 2.30e-23 101

Find 110 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGGATATTTCAAGATAA+TGG 0.182846 5_2:-5034753 Msa0751570:CDS
TGGCACCATAGGTCCTATTT+AGG 0.200225 5_2:+5034552 None:intergenic
TCCATGCACACACTGATTTC+AGG 0.246998 5_2:+5034704 None:intergenic
CAGTGATCCCTTTGGAAACT+TGG 0.262026 5_2:-5034972 Msa0751570:CDS
GTGGTGTTCCTTGGAATTAC+AGG 0.282170 5_2:+5034884 None:intergenic
CTGATTTCAGGAACTCCTTT+TGG 0.283375 5_2:+5034716 None:intergenic
TGTTCAGGTTGATGTAGATT+TGG 0.316072 5_2:-5035281 Msa0751570:CDS
CTATGGTGCCACAATGGATT+TGG 0.318656 5_2:-5034540 Msa0751570:CDS
TTAGGATATTTCAAGATAAT+GGG 0.332403 5_2:-5034752 Msa0751570:CDS
TAACAGGCACCACAGGTATA+CGG 0.347738 5_2:+5034627 None:intergenic
AACTTCTGTTATTATGCATA+AGG 0.352864 5_2:+5035066 None:intergenic
GGCACCATAGGTCCTATTTA+GGG 0.356331 5_2:+5034553 None:intergenic
TACCATCGGTGGAGAAGATT+TGG 0.359082 5_2:-5035440 Msa0751570:CDS
GTTCAGGTTGATGTAGATTT+GGG 0.369664 5_2:-5035280 Msa0751570:CDS
GGCATCCTCACTTCCATAAC+AGG 0.369992 5_2:+5034611 None:intergenic
ATCAACCTGAACACTGCTTT+GGG 0.377089 5_2:+5035291 None:intergenic
ATGGAAGGAGCTGTTGCTTC+AGG 0.378268 5_2:-5034998 Msa0751570:CDS
CATCAACCTGAACACTGCTT+TGG 0.383070 5_2:+5035290 None:intergenic
TTCCACCCAAAGCAGTGTTC+AGG 0.388302 5_2:-5035296 Msa0751570:CDS
TATACCTGTGGTGCCTGTTA+TGG 0.395756 5_2:-5034624 Msa0751570:CDS
CATGTAAACATTGGATGATA+AGG 0.397163 5_2:+5035176 None:intergenic
GCAGAAGAAAACCACTTGTT+AGG 0.403341 5_2:-5034770 Msa0751570:CDS
TTATAAAGGTATAAACCCTT+TGG 0.418915 5_2:-5035044 Msa0751570:CDS
CATGATGCAAAGGTAGAAGT+TGG 0.434870 5_2:-5035157 Msa0751570:CDS
CCTTTGGAAGGTGCGGTTTG+TGG 0.435575 5_2:-5035028 Msa0751570:CDS
ATAATAACAGAAGTTTATAA+AGG 0.443225 5_2:-5035058 Msa0751570:CDS
GGTGTGCTGAGGCCCTAAAT+AGG 0.444919 5_2:-5034565 Msa0751570:CDS
ATGATGCAAAGGTAGAAGTT+GGG 0.448859 5_2:-5035156 Msa0751570:CDS
GCTGGCATTGTGGTGTTCCT+TGG 0.449119 5_2:+5034875 None:intergenic
ATCAATTTATGCCTTCTTGA+GGG 0.450343 5_2:+5034514 None:intergenic
TCAGGCATCAGTGATCCCTT+TGG 0.456587 5_2:-5034980 Msa0751570:CDS
TGTTGACAGGGCGGAGTTTG+AGG 0.457797 5_2:-5035233 Msa0751570:CDS
GCCATTGGAATTCGAGCTGA+TGG 0.458770 5_2:-5034920 Msa0751570:CDS
AAAATATATTCAAGCGTCAT+GGG 0.460640 5_2:-5035381 Msa0751570:CDS
ATAAATGATGTGATACTTGT+TGG 0.460986 5_2:-5035130 Msa0751570:CDS
GTAACAAGATTCTCCACCCT+TGG 0.466538 5_2:+5035091 None:intergenic
TTAGCCGGTGTTGTGATGCC+TGG 0.471501 5_2:-5034653 Msa0751570:CDS
GAGAGAAGCATTAACTAGAA+AGG 0.472950 5_2:-5037984 Msa0751570:CDS
CAAGAGAAGAGCAATGTAGC+TGG 0.473578 5_2:-5038046 Msa0751570:CDS
CAAGCCACTCCTCTTGCCAT+TGG 0.482744 5_2:-5034935 Msa0751570:CDS
AGAGAAGCATTAACTAGAAA+GGG 0.484078 5_2:-5037983 Msa0751570:CDS
GTTGATGTAGATTTGGGAGA+TGG 0.485617 5_2:-5035274 Msa0751570:CDS
GGTCAAAGAAATTAAATCAA+TGG 0.491607 5_2:-5035359 Msa0751570:CDS
TAACAAGATTCTCCACCCTT+GGG 0.492275 5_2:+5035092 None:intergenic
GAAAATATATTCAAGCGTCA+TGG 0.496398 5_2:-5035382 Msa0751570:CDS
CAAATCCATTGTGGCACCAT+AGG 0.497810 5_2:+5034541 None:intergenic
AAAGCTGATGAATTGCATCC+TGG 0.503417 5_2:+5035317 None:intergenic
AACAAGTCCAAGTTTCCAAA+GGG 0.511681 5_2:+5034965 None:intergenic
AGATATGCAAGGTTGTTGAC+AGG 0.512232 5_2:-5035246 Msa0751570:CDS
TATCAATTTATGCCTTCTTG+AGG 0.516603 5_2:+5034513 None:intergenic
AACAGGCACCACAGGTATAC+GGG 0.517047 5_2:+5034628 None:intergenic
GGAATACCTGCAGCACCAAA+AGG 0.524506 5_2:-5034731 Msa0751570:CDS
CACAAACCGCACCTTCCAAA+GGG 0.529952 5_2:+5035029 None:intergenic
CCTTTGCATCATGTAAACAT+TGG 0.531721 5_2:+5035167 None:intergenic
GAGGCCCTAAATAGGACCTA+TGG 0.533257 5_2:-5034557 Msa0751570:CDS
TGCGGTTTGTGGTGCAGCAA+TGG 0.533347 5_2:-5035017 Msa0751570:CDS
ACCACAGGTATACGGGATCC+AGG 0.535468 5_2:+5034635 None:intergenic
TCCTGAAATCAGTGTGTGCA+TGG 0.540172 5_2:-5034705 Msa0751570:CDS
TCTTGAAATATCCTAACAAG+TGG 0.545629 5_2:+5034759 None:intergenic
AAAAGTAGATCTTTACGTGC+TGG 0.548488 5_2:+5034857 None:intergenic
AGAGCAATGTAGCTGGAGAA+TGG 0.549773 5_2:-5038039 Msa0751570:CDS
AGCTGGAGAATGGTGGAAGA+AGG 0.551496 5_2:-5038029 Msa0751570:CDS
AACCTGAACACTGCTTTGGG+TGG 0.551609 5_2:+5035294 None:intergenic
GGATTTGGTTACCCTCAAGA+AGG 0.565408 5_2:-5034525 Msa0751570:CDS
AACCAAATCTTCTCCACCGA+TGG 0.568389 5_2:+5035438 None:intergenic
GTACGAAGGTGAGGGAAAGA+AGG 0.571023 5_2:-5034792 Msa0751570:CDS
GATACTTGTGTACGAAGGTG+AGG 0.578994 5_2:-5034801 Msa0751570:CDS
AAAGGTATAAACCCTTTGGA+AGG 0.581870 5_2:-5035040 Msa0751570:CDS
CCCATCAGCTCGAATTCCAA+TGG 0.583989 5_2:+5034919 None:intergenic
TAACAAGTCCAAGTTTCCAA+AGG 0.584586 5_2:+5034964 None:intergenic
GAGGATGTTCTTATATCCCA+AGG 0.584781 5_2:-5035108 Msa0751570:CDS
CCATGACCATCATCAACCAT+TGG 0.585720 5_2:+5034590 None:intergenic
AAGCTGATGAATTGCATCCT+GGG 0.587754 5_2:+5035318 None:intergenic
ATTGCTTCGAGTTGCAACCC+AGG 0.590200 5_2:-5035335 Msa0751570:CDS
CCACAAACCGCACCTTCCAA+AGG 0.591096 5_2:+5035028 None:intergenic
TGATGCAAAGGTAGAAGTTG+GGG 0.591780 5_2:-5035155 Msa0751570:CDS
ACTTCCATAACAGGCACCAC+AGG 0.592348 5_2:+5034620 None:intergenic
CCAATGTTTACATGATGCAA+AGG 0.592560 5_2:-5035167 Msa0751570:CDS
CCATTGGAATTCGAGCTGAT+GGG 0.601553 5_2:-5034919 Msa0751570:CDS
AGTTTGTACCTGTAATTCCA+AGG 0.609145 5_2:-5034892 Msa0751570:CDS
ATCTTTACGTGCTGGCATTG+TGG 0.613475 5_2:+5034865 None:intergenic
AATTCCAATGGCAAGAGGAG+TGG 0.613750 5_2:+5034931 None:intergenic
GTTTGTGGTGCAGCAATGGA+AGG 0.619096 5_2:-5035013 Msa0751570:CDS
TGGTCATGGTTGGTGTGCTG+AGG 0.620833 5_2:-5034576 Msa0751570:CDS
AATGATGTGATACTTGTTGG+AGG 0.629718 5_2:-5035127 Msa0751570:CDS
TAGGACCTATGGTGCCACAA+TGG 0.630018 5_2:-5034546 Msa0751570:CDS
TGGTGCCTGTTATGGAAGTG+AGG 0.631903 5_2:-5034616 Msa0751570:CDS
TGACAGGGCGGAGTTTGAGG+AGG 0.633647 5_2:-5035230 Msa0751570:CDS
TATAAACCCTTTGGAAGGTG+CGG 0.634750 5_2:-5035035 Msa0751570:CDS
GCATTGGCAGGAAGTACCAT+CGG 0.637875 5_2:-5035454 Msa0751570:intron
AGGATGCCAATGGTTGATGA+TGG 0.639984 5_2:-5034596 Msa0751570:CDS
GGATCCAGGCATCACAACAC+CGG 0.644727 5_2:+5034649 None:intergenic
GATATGCAAGGTTGTTGACA+GGG 0.644837 5_2:-5035245 Msa0751570:CDS
ATACTTGTGTACGAAGGTGA+GGG 0.646011 5_2:-5034800 Msa0751570:CDS
AGGATGTTCTTATATCCCAA+GGG 0.646556 5_2:-5035107 Msa0751570:CDS
GTTTGAGGAGGTGAACAAAG+AGG 0.649304 5_2:-5035218 Msa0751570:CDS
GCTCGAATTCCAATGGCAAG+AGG 0.649760 5_2:+5034926 None:intergenic
TGGTTGATGATGGTCATGGT+TGG 0.651359 5_2:-5034586 Msa0751570:CDS
GCCTGGATCCCGTATACCTG+TGG 0.656774 5_2:-5034636 Msa0751570:CDS
CCAATGGTTGATGATGGTCA+TGG 0.660629 5_2:-5034590 Msa0751570:CDS
ATGTTCTTATATCCCAAGGG+TGG 0.662483 5_2:-5035104 Msa0751570:CDS
GCAATGTAGCTGGAGAATGG+TGG 0.674492 5_2:-5038036 Msa0751570:CDS
GAGGGTAACCAAATCCATTG+TGG 0.675212 5_2:+5034532 None:intergenic
TATTCATGATAATCAAACTG+AGG 0.679559 5_2:-5034828 Msa0751570:CDS
AAATATATTCAAGCGTCATG+GGG 0.682975 5_2:-5035380 Msa0751570:CDS
AGATGGTTTGAAGATATGCA+AGG 0.687926 5_2:-5035257 Msa0751570:CDS
TTGGCAGGAAGTACCATCGG+TGG 0.690515 5_2:-5035451 Msa0751570:intron
ATGCAAGGTTGTTGACAGGG+CGG 0.708122 5_2:-5035242 Msa0751570:CDS
TATGGAAGTGAGGATGCCAA+TGG 0.723950 5_2:-5034606 Msa0751570:CDS
GCATTGATACTTGTGTACGA+AGG 0.792141 5_2:-5034806 Msa0751570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATATATATATATA+TGG + chr5_2:5034778-5034797 None:intergenic 0.0%
!! AAAATTGAAAAGTAATAATT+TGG + chr5_2:5034828-5034847 None:intergenic 10.0%
!! TAAAAATTATTATTATACAC+GGG - chr5_2:5035107-5035126 Msa0751570:CDS 10.0%
!! AATTAATTTATAAACACAAT+TGG + chr5_2:5035967-5035986 None:intergenic 10.0%
!! TAAAAAAGATAATAACTAAA+TGG + chr5_2:5036347-5036366 None:intergenic 10.0%
!! TTAAAACATTAAAAAATTCA+GGG + chr5_2:5036529-5036548 None:intergenic 10.0%
!!! TTTAAAACATTAAAAAATTC+AGG + chr5_2:5036530-5036549 None:intergenic 10.0%
!!! ATTGTAACTTTTAAAATATA+GGG - chr5_2:5036662-5036681 Msa0751570:intron 10.0%
!!! ATAATAAGTTTTAATAAGGA+AGG + chr5_2:5035020-5035039 None:intergenic 15.0%
!!! GAAGATAATAAGTTTTAATA+AGG + chr5_2:5035024-5035043 None:intergenic 15.0%
!!! TCTAGCAAAAAATTTTTTTT+AGG - chr5_2:5035178-5035197 Msa0751570:CDS 15.0%
!!! CTAGCAAAAAATTTTTTTTA+GGG - chr5_2:5035179-5035198 Msa0751570:CDS 15.0%
!! TTATAATTAATTACGGATAA+TGG - chr5_2:5035302-5035321 Msa0751570:CDS 15.0%
!! TTGGAAAAATTATGATAAAT+GGG + chr5_2:5035948-5035967 None:intergenic 15.0%
!! ATTGGAAAAATTATGATAAA+TGG + chr5_2:5035949-5035968 None:intergenic 15.0%
!!! TCAATTCTTCTTTTTTATTA+TGG - chr5_2:5036423-5036442 Msa0751570:intron 15.0%
!! TTTAAAAGTTACAATCAATT+TGG + chr5_2:5036657-5036676 None:intergenic 15.0%
!!! GATTGTAACTTTTAAAATAT+AGG - chr5_2:5036661-5036680 Msa0751570:intron 15.0%
!! AGATTATAAGAAATTCAAAA+AGG + chr5_2:5036751-5036770 None:intergenic 15.0%
!! ATAATAACAGAAGTTTATAA+AGG - chr5_2:5037520-5037539 Msa0751570:intron 15.0%
!!! AATAATTTGGGATAAGATTT+TGG + chr5_2:5034693-5034712 None:intergenic 20.0%
!! AAAAGATTGGAGAATAATTT+GGG + chr5_2:5034705-5034724 None:intergenic 20.0%
!! GTATAAAAGTAATTGTTGAA+TGG + chr5_2:5034901-5034920 None:intergenic 20.0%
!!! TCAACAATTACTTTTATACA+CGG - chr5_2:5034902-5034921 Msa0751570:CDS 20.0%
!! AGAAAATTTAAATTGCATCT+TGG + chr5_2:5035503-5035522 None:intergenic 20.0%
!! TTTGTGTATTATATGTTTGA+TGG + chr5_2:5035728-5035747 None:intergenic 20.0%
!! TCTAATTAATACAAACAACA+GGG + chr5_2:5036074-5036093 None:intergenic 20.0%
!! TTCTAATTAATACAAACAAC+AGG + chr5_2:5036075-5036094 None:intergenic 20.0%
!! TTGAATTTCTTATAATCTCA+AGG - chr5_2:5036753-5036772 Msa0751570:intron 20.0%
!! AAATTTGAGTATGTAATGTT+TGG + chr5_2:5036966-5036985 None:intergenic 20.0%
!!! TTGAATATATTTTCAGAATC+TGG + chr5_2:5037190-5037209 None:intergenic 20.0%
!! TTAGGATATTTCAAGATAAT+GGG - chr5_2:5037826-5037845 Msa0751570:intron 20.0%
! TTATAGTGAGTAATTGAGAA+AGG - chr5_2:5034642-5034661 Msa0751570:CDS 25.0%
! GAAAAGATTGGAGAATAATT+TGG + chr5_2:5034706-5034725 None:intergenic 25.0%
! ATCTGTACTAAAGAAAAGAT+TGG + chr5_2:5034718-5034737 None:intergenic 25.0%
!! ATCAGCACTCTAAAAATTAT+TGG + chr5_2:5034747-5034766 None:intergenic 25.0%
!!! CAACAATTACTTTTATACAC+GGG - chr5_2:5034903-5034922 Msa0751570:CDS 25.0%
!! TAAGGAAGGTTATGAAATTT+TGG + chr5_2:5035006-5035025 None:intergenic 25.0%
! CATTATCTCCATATAATATG+AGG + chr5_2:5035379-5035398 None:intergenic 25.0%
! CTCATATTATATGGAGATAA+TGG - chr5_2:5035377-5035396 Msa0751570:CDS 25.0%
!! TGACAATGATGTTGAAATTT+TGG + chr5_2:5035409-5035428 None:intergenic 25.0%
!!! TAATGCATTGGTACAATTTT+TGG + chr5_2:5035599-5035618 None:intergenic 25.0%
! ATGATAAATGGGTATGAATT+TGG + chr5_2:5035937-5035956 None:intergenic 25.0%
! AATATGAGAGAGAAAACAAA+CGG + chr5_2:5036143-5036162 None:intergenic 25.0%
! TTTAAATCAACTTGCCTTAT+AGG - chr5_2:5036363-5036382 Msa0751570:intron 25.0%
! TCAAATTCAAACAATATGCT+AGG - chr5_2:5036592-5036611 Msa0751570:intron 25.0%
! CAAATTCAAACAATATGCTA+GGG - chr5_2:5036593-5036612 Msa0751570:intron 25.0%
!!! TTGACAAGTTTAAAAGTGTT+AGG - chr5_2:5036723-5036742 Msa0751570:intron 25.0%
!!! TGACAAGTTTAAAAGTGTTA+GGG - chr5_2:5036724-5036743 Msa0751570:intron 25.0%
! ATGTTACTGTGTATAATTTG+TGG - chr5_2:5036847-5036866 Msa0751570:intron 25.0%
!! TGTGTATAATTTGTGGTATT+TGG - chr5_2:5036854-5036873 Msa0751570:intron 25.0%
! ACAGTTGTTAAAACAATTAC+AGG + chr5_2:5036924-5036943 None:intergenic 25.0%
!!! TGTTTTAACAACTGTGAAAA+TGG - chr5_2:5036929-5036948 Msa0751570:intron 25.0%
! AAAATATATTCAAGCGTCAT+GGG - chr5_2:5037197-5037216 Msa0751570:intron 25.0%
! GGTCAAAGAAATTAAATCAA+TGG - chr5_2:5037219-5037238 Msa0751570:intron 25.0%
! ATAAATGATGTGATACTTGT+TGG - chr5_2:5037448-5037467 Msa0751570:intron 25.0%
! AACTTCTGTTATTATGCATA+AGG + chr5_2:5037515-5037534 None:intergenic 25.0%
!! TTATAAAGGTATAAACCCTT+TGG - chr5_2:5037534-5037553 Msa0751570:intron 25.0%
! TATTCATGATAATCAAACTG+AGG - chr5_2:5037750-5037769 Msa0751570:intron 25.0%
! GTTAGGATATTTCAAGATAA+TGG - chr5_2:5037825-5037844 Msa0751570:intron 25.0%
!! AGAGAAGCATTAACTAGAAA+GGG - chr5_2:5034595-5034614 Msa0751570:CDS 30.0%
GTACAGTATATTTCAAGGAA+TGG + chr5_2:5034668-5034687 None:intergenic 30.0%
! TGGAAGTACAGTATATTTCA+AGG + chr5_2:5034673-5034692 None:intergenic 30.0%
TAATTGTTGAATGGTAGAGA+TGG + chr5_2:5034892-5034911 None:intergenic 30.0%
ATGTCAGTAGATTTGTATCA+GGG + chr5_2:5034938-5034957 None:intergenic 30.0%
!! GAAGGTTATGAAATTTTGGT+GGG + chr5_2:5035002-5035021 None:intergenic 30.0%
CCATTATGCACATGAAATTA+AGG + chr5_2:5035252-5035271 None:intergenic 30.0%
CCTTAATTTCATGTGCATAA+TGG - chr5_2:5035249-5035268 Msa0751570:CDS 30.0%
TGTGACAACCTCATATTATA+TGG - chr5_2:5035368-5035387 Msa0751570:CDS 30.0%
CGCAAATTAACTACACAAAT+TGG - chr5_2:5035437-5035456 Msa0751570:CDS 30.0%
! TTGGTCGAAATTCATTGATT+CGG + chr5_2:5035484-5035503 None:intergenic 30.0%
TCATATAAAGTATGACTACG+TGG - chr5_2:5035552-5035571 Msa0751570:intron 30.0%
CATATAAAGTATGACTACGT+GGG - chr5_2:5035553-5035572 Msa0751570:intron 30.0%
! AAAGTGTGAGAATGTTTTCT+GGG - chr5_2:5036032-5036051 Msa0751570:intron 30.0%
ATATGAGAGAGAAAACAAAC+GGG + chr5_2:5036142-5036161 None:intergenic 30.0%
TAATAACTAAATGGCACTGT+TGG + chr5_2:5036338-5036357 None:intergenic 30.0%
AGTAGTTACAAACACCTATA+AGG + chr5_2:5036380-5036399 None:intergenic 30.0%
!! TGATGATGGATCATAAACTT+AGG - chr5_2:5036623-5036642 Msa0751570:intron 30.0%
!! GATGATGGATCATAAACTTA+GGG - chr5_2:5036624-5036643 Msa0751570:intron 30.0%
! CACTTTTAAACTTGTCAAGT+TGG + chr5_2:5036721-5036740 None:intergenic 30.0%
ATTTGGTCAGATATGTACTT+TGG - chr5_2:5036871-5036890 Msa0751570:intron 30.0%
TTTAACAACTGTGAAAATGG+AGG - chr5_2:5036932-5036951 Msa0751570:intron 30.0%
GAAAATATATTCAAGCGTCA+TGG - chr5_2:5037196-5037215 Msa0751570:intron 30.0%
AAATATATTCAAGCGTCATG+GGG - chr5_2:5037198-5037217 Msa0751570:intron 30.0%
CATGTAAACATTGGATGATA+AGG + chr5_2:5037405-5037424 None:intergenic 30.0%
TCTTGAAATATCCTAACAAG+TGG + chr5_2:5037822-5037841 None:intergenic 30.0%
!! GAGAGAAGCATTAACTAGAA+AGG - chr5_2:5034594-5034613 Msa0751570:CDS 35.0%
GATGTCAGTAGATTTGTATC+AGG + chr5_2:5034939-5034958 None:intergenic 35.0%
! GGAAGGTTATGAAATTTTGG+TGG + chr5_2:5035003-5035022 None:intergenic 35.0%
!! TGGTCGAAATTCATTGATTC+GGG + chr5_2:5035483-5035502 None:intergenic 35.0%
!! GAAAGTGTGAGAATGTTTTC+TGG - chr5_2:5036031-5036050 Msa0751570:intron 35.0%
! AAGTGTGAGAATGTTTTCTG+GGG - chr5_2:5036033-5036052 Msa0751570:intron 35.0%
CATGCATGACACTTTCAATT+TGG - chr5_2:5036502-5036521 Msa0751570:intron 35.0%
TGGATCATAAACTTAGGGTT+AGG - chr5_2:5036629-5036648 Msa0751570:intron 35.0%
GGATCATAAACTTAGGGTTA+GGG - chr5_2:5036630-5036649 Msa0751570:intron 35.0%
! GGGACTAAATTGATAGTAAG+TGG - chr5_2:5036682-5036701 Msa0751570:intron 35.0%
AATCCCTGACTTTCTCAAAT+AGG + chr5_2:5036780-5036799 None:intergenic 35.0%
! AGTATCCCAGATAAAAGCAT+TGG - chr5_2:5037108-5037127 Msa0751570:intron 35.0%
!! TGTTCAGGTTGATGTAGATT+TGG - chr5_2:5037297-5037316 Msa0751570:intron 35.0%
!! GTTCAGGTTGATGTAGATTT+GGG - chr5_2:5037298-5037317 Msa0751570:intron 35.0%
AGATGGTTTGAAGATATGCA+AGG - chr5_2:5037321-5037340 Msa0751570:intron 35.0%
CCTTTGCATCATGTAAACAT+TGG + chr5_2:5037414-5037433 None:intergenic 35.0%
CCAATGTTTACATGATGCAA+AGG - chr5_2:5037411-5037430 Msa0751570:intron 35.0%
ATGATGCAAAGGTAGAAGTT+GGG - chr5_2:5037422-5037441 Msa0751570:intron 35.0%
! AATGATGTGATACTTGTTGG+AGG - chr5_2:5037451-5037470 Msa0751570:intron 35.0%
AGGATGTTCTTATATCCCAA+GGG - chr5_2:5037471-5037490 Msa0751570:intron 35.0%
! AAAGGTATAAACCCTTTGGA+AGG - chr5_2:5037538-5037557 Msa0751570:intron 35.0%
AACAAGTCCAAGTTTCCAAA+GGG + chr5_2:5037616-5037635 None:intergenic 35.0%
TAACAAGTCCAAGTTTCCAA+AGG + chr5_2:5037617-5037636 None:intergenic 35.0%
AGTTTGTACCTGTAATTCCA+AGG - chr5_2:5037686-5037705 Msa0751570:intron 35.0%
AAAAGTAGATCTTTACGTGC+TGG + chr5_2:5037724-5037743 None:intergenic 35.0%
GAGATGCAATGCTAATGCAT+TGG + chr5_2:5035611-5035630 None:intergenic 40.0%
ACAAGAGTAGCAGAAGAAGA+AGG + chr5_2:5036248-5036267 None:intergenic 40.0%
AACTAAATGGCACTGTTGGT+TGG + chr5_2:5036334-5036353 None:intergenic 40.0%
TGACATTTGATTGATGCAGC+AGG + chr5_2:5036403-5036422 None:intergenic 40.0%
GCTAGGGACTAAATTGATGA+TGG - chr5_2:5036609-5036628 Msa0751570:intron 40.0%
AGGACCTATTTGAGAAAGTC+AGG - chr5_2:5036773-5036792 Msa0751570:intron 40.0%
GGACCTATTTGAGAAAGTCA+GGG - chr5_2:5036774-5036793 Msa0751570:intron 40.0%
GAGAAAGTCAGGGATTATGT+TGG - chr5_2:5036784-5036803 Msa0751570:intron 40.0%
! TCCTGCCAATGCTTTTATCT+GGG + chr5_2:5037116-5037135 None:intergenic 40.0%
! TTCCTGCCAATGCTTTTATC+TGG + chr5_2:5037117-5037136 None:intergenic 40.0%
AAGCTGATGAATTGCATCCT+GGG + chr5_2:5037263-5037282 None:intergenic 40.0%
AAAGCTGATGAATTGCATCC+TGG + chr5_2:5037264-5037283 None:intergenic 40.0%
ATCAACCTGAACACTGCTTT+GGG + chr5_2:5037290-5037309 None:intergenic 40.0%
GTTGATGTAGATTTGGGAGA+TGG - chr5_2:5037304-5037323 Msa0751570:intron 40.0%
AGATATGCAAGGTTGTTGAC+AGG - chr5_2:5037332-5037351 Msa0751570:intron 40.0%
GATATGCAAGGTTGTTGACA+GGG - chr5_2:5037333-5037352 Msa0751570:intron 40.0%
CATGATGCAAAGGTAGAAGT+TGG - chr5_2:5037421-5037440 Msa0751570:intron 40.0%
TGATGCAAAGGTAGAAGTTG+GGG - chr5_2:5037423-5037442 Msa0751570:intron 40.0%
GAGGATGTTCTTATATCCCA+AGG - chr5_2:5037470-5037489 Msa0751570:intron 40.0%
ATGTTCTTATATCCCAAGGG+TGG - chr5_2:5037474-5037493 Msa0751570:intron 40.0%
TAACAAGATTCTCCACCCTT+GGG + chr5_2:5037489-5037508 None:intergenic 40.0%
! TATAAACCCTTTGGAAGGTG+CGG - chr5_2:5037543-5037562 Msa0751570:intron 40.0%
! GCATTGATACTTGTGTACGA+AGG - chr5_2:5037772-5037791 Msa0751570:intron 40.0%
ATACTTGTGTACGAAGGTGA+GGG - chr5_2:5037778-5037797 Msa0751570:intron 40.0%
GCAGAAGAAAACCACTTGTT+AGG - chr5_2:5037808-5037827 Msa0751570:intron 40.0%
! CTGATTTCAGGAACTCCTTT+TGG + chr5_2:5037865-5037884 None:intergenic 40.0%
CAAGAGAAGAGCAATGTAGC+TGG - chr5_2:5034532-5034551 Msa0751570:CDS 45.0%
AGAGCAATGTAGCTGGAGAA+TGG - chr5_2:5034539-5034558 Msa0751570:CDS 45.0%
!! TCCCAGATAAAAGCATTGGC+AGG - chr5_2:5037112-5037131 Msa0751570:intron 45.0%
TACCATCGGTGGAGAAGATT+TGG - chr5_2:5037138-5037157 Msa0751570:intron 45.0%
AACCAAATCTTCTCCACCGA+TGG + chr5_2:5037143-5037162 None:intergenic 45.0%
CATCAACCTGAACACTGCTT+TGG + chr5_2:5037291-5037310 None:intergenic 45.0%
GTTTGAGGAGGTGAACAAAG+AGG - chr5_2:5037360-5037379 Msa0751570:intron 45.0%
GTAACAAGATTCTCCACCCT+TGG + chr5_2:5037490-5037509 None:intergenic 45.0%
! CAGTGATCCCTTTGGAAACT+TGG - chr5_2:5037606-5037625 Msa0751570:intron 45.0%
AATTCCAATGGCAAGAGGAG+TGG + chr5_2:5037650-5037669 None:intergenic 45.0%
CCATTGGAATTCGAGCTGAT+GGG - chr5_2:5037659-5037678 Msa0751570:intron 45.0%
GTGGTGTTCCTTGGAATTAC+AGG + chr5_2:5037697-5037716 None:intergenic 45.0%
! ATCTTTACGTGCTGGCATTG+TGG + chr5_2:5037716-5037735 None:intergenic 45.0%
GATACTTGTGTACGAAGGTG+AGG - chr5_2:5037777-5037796 Msa0751570:intron 45.0%
TCCTGAAATCAGTGTGTGCA+TGG - chr5_2:5037873-5037892 Msa0751570:intron 45.0%
!! TCCATGCACACACTGATTTC+AGG + chr5_2:5037877-5037896 None:intergenic 45.0%
TAACAGGCACCACAGGTATA+CGG + chr5_2:5037954-5037973 None:intergenic 45.0%
TATACCTGTGGTGCCTGTTA+TGG - chr5_2:5037954-5037973 Msa0751570:intron 45.0%
TATGGAAGTGAGGATGCCAA+TGG - chr5_2:5037972-5037991 Msa0751570:CDS 45.0%
!! AGGATGCCAATGGTTGATGA+TGG - chr5_2:5037982-5038001 Msa0751570:CDS 45.0%
CCATGACCATCATCAACCAT+TGG + chr5_2:5037991-5038010 None:intergenic 45.0%
!! CCAATGGTTGATGATGGTCA+TGG - chr5_2:5037988-5038007 Msa0751570:CDS 45.0%
!! TGGTTGATGATGGTCATGGT+TGG - chr5_2:5037992-5038011 Msa0751570:CDS 45.0%
GGCACCATAGGTCCTATTTA+GGG + chr5_2:5038028-5038047 None:intergenic 45.0%
TGGCACCATAGGTCCTATTT+AGG + chr5_2:5038029-5038048 None:intergenic 45.0%
CAAATCCATTGTGGCACCAT+AGG + chr5_2:5038040-5038059 None:intergenic 45.0%
!! CTATGGTGCCACAATGGATT+TGG - chr5_2:5038038-5038057 Msa0751570:CDS 45.0%
GAGGGTAACCAAATCCATTG+TGG + chr5_2:5038049-5038068 None:intergenic 45.0%
! GGATTTGGTTACCCTCAAGA+AGG - chr5_2:5038053-5038072 Msa0751570:CDS 45.0%
!! TTAAAAATTATTATTATACA+CGG - chr5_2:5035106-5035125 Msa0751570:CDS 5.0%
!!! TTGTTATTTATAATTAATTA+CGG - chr5_2:5035295-5035314 Msa0751570:CDS 5.0%
!!! ATTTTTTAATGTTTTAAAAA+TGG - chr5_2:5036532-5036551 Msa0751570:intron 5.0%
GCAATGTAGCTGGAGAATGG+TGG - chr5_2:5034542-5034561 Msa0751570:CDS 50.0%
! AGCTGGAGAATGGTGGAAGA+AGG - chr5_2:5034549-5034568 Msa0751570:CDS 50.0%
ACTCACTCACTCACTCACTC+AGG - chr5_2:5036209-5036228 Msa0751570:intron 50.0%
!! GCATTGGCAGGAAGTACCAT+CGG - chr5_2:5037124-5037143 Msa0751570:intron 50.0%
!! ATTGCTTCGAGTTGCAACCC+AGG - chr5_2:5037243-5037262 Msa0751570:intron 50.0%
TTCCACCCAAAGCAGTGTTC+AGG - chr5_2:5037282-5037301 Msa0751570:intron 50.0%
! AACCTGAACACTGCTTTGGG+TGG + chr5_2:5037287-5037306 None:intergenic 50.0%
ATGCAAGGTTGTTGACAGGG+CGG - chr5_2:5037336-5037355 Msa0751570:intron 50.0%
CACAAACCGCACCTTCCAAA+GGG + chr5_2:5037552-5037571 None:intergenic 50.0%
GTTTGTGGTGCAGCAATGGA+AGG - chr5_2:5037565-5037584 Msa0751570:intron 50.0%
! ATGGAAGGAGCTGTTGCTTC+AGG - chr5_2:5037580-5037599 Msa0751570:intron 50.0%
TCAGGCATCAGTGATCCCTT+TGG - chr5_2:5037598-5037617 Msa0751570:intron 50.0%
GCTCGAATTCCAATGGCAAG+AGG + chr5_2:5037655-5037674 None:intergenic 50.0%
GCCATTGGAATTCGAGCTGA+TGG - chr5_2:5037658-5037677 Msa0751570:intron 50.0%
CCCATCAGCTCGAATTCCAA+TGG + chr5_2:5037662-5037681 None:intergenic 50.0%
GTACGAAGGTGAGGGAAAGA+AGG - chr5_2:5037786-5037805 Msa0751570:intron 50.0%
GGAATACCTGCAGCACCAAA+AGG - chr5_2:5037847-5037866 Msa0751570:intron 50.0%
!! AACGTGCTGCGAGTTTTAGC+CGG - chr5_2:5037910-5037929 Msa0751570:intron 50.0%
AACAGGCACCACAGGTATAC+GGG + chr5_2:5037953-5037972 None:intergenic 50.0%
ACTTCCATAACAGGCACCAC+AGG + chr5_2:5037961-5037980 None:intergenic 50.0%
TGGTGCCTGTTATGGAAGTG+AGG - chr5_2:5037962-5037981 Msa0751570:intron 50.0%
GGCATCCTCACTTCCATAAC+AGG + chr5_2:5037970-5037989 None:intergenic 50.0%
GAGGCCCTAAATAGGACCTA+TGG - chr5_2:5038021-5038040 Msa0751570:CDS 50.0%
!! TAGGACCTATGGTGCCACAA+TGG - chr5_2:5038032-5038051 Msa0751570:CDS 50.0%
! AACAAACCCGTGCTGACGCA+CGG + chr5_2:5035849-5035868 None:intergenic 55.0%
TGAGTGAGTGAGTGAGCGAG+CGG + chr5_2:5036202-5036221 None:intergenic 55.0%
!! TTGGCAGGAAGTACCATCGG+TGG - chr5_2:5037127-5037146 Msa0751570:intron 55.0%
TGTTGACAGGGCGGAGTTTG+AGG - chr5_2:5037345-5037364 Msa0751570:intron 55.0%
CCACAAACCGCACCTTCCAA+AGG + chr5_2:5037553-5037572 None:intergenic 55.0%
! CCTTTGGAAGGTGCGGTTTG+TGG - chr5_2:5037550-5037569 Msa0751570:intron 55.0%
TGCGGTTTGTGGTGCAGCAA+TGG - chr5_2:5037561-5037580 Msa0751570:intron 55.0%
CAAGCCACTCCTCTTGCCAT+TGG - chr5_2:5037643-5037662 Msa0751570:intron 55.0%
GCTGGCATTGTGGTGTTCCT+TGG + chr5_2:5037706-5037725 None:intergenic 55.0%
!!! GGAACTCCTTTTGGTGCTGC+AGG + chr5_2:5037856-5037875 None:intergenic 55.0%
!! TTAGCCGGTGTTGTGATGCC+TGG - chr5_2:5037925-5037944 Msa0751570:intron 55.0%
GGATCCAGGCATCACAACAC+CGG + chr5_2:5037932-5037951 None:intergenic 55.0%
ACCACAGGTATACGGGATCC+AGG + chr5_2:5037946-5037965 None:intergenic 55.0%
! TGGTCATGGTTGGTGTGCTG+AGG - chr5_2:5038002-5038021 Msa0751570:CDS 55.0%
GGTGTGCTGAGGCCCTAAAT+AGG - chr5_2:5038013-5038032 Msa0751570:CDS 55.0%
ACTGTACCCGTGCGTCAGCA+CGG - chr5_2:5035839-5035858 Msa0751570:intron 60.0%
! ACAAACCCGTGCTGACGCAC+GGG + chr5_2:5035848-5035867 None:intergenic 60.0%
TGACAGGGCGGAGTTTGAGG+AGG - chr5_2:5037348-5037367 Msa0751570:intron 60.0%
GCCTGGATCCCGTATACCTG+TGG - chr5_2:5037942-5037961 Msa0751570:intron 60.0%
CTGTACCCGTGCGTCAGCAC+GGG - chr5_2:5035840-5035859 Msa0751570:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 5034520 5038080 5034520 ID=Msa0751570;Name=Msa0751570
chr5_2 mRNA 5034520 5038080 5034520 ID=Msa0751570-mRNA-1;Parent=Msa0751570;Name=Msa0751570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.5|1|1|2|0|351
chr5_2 exon 5037972 5038080 5037972 ID=Msa0751570-mRNA-1:exon:1995;Parent=Msa0751570-mRNA-1
chr5_2 exon 5034520 5035466 5034520 ID=Msa0751570-mRNA-1:exon:1994;Parent=Msa0751570-mRNA-1
chr5_2 CDS 5037972 5038080 5037972 ID=Msa0751570-mRNA-1:cds;Parent=Msa0751570-mRNA-1
chr5_2 CDS 5034520 5035466 5034520 ID=Msa0751570-mRNA-1:cds;Parent=Msa0751570-mRNA-1
Gene Sequence

>Msa0751570

ATGGTTTTTCAGCAAGAGAAGAGCAATGTAGCTGGAGAATGGTGGAAGAAGGAACGTTTTAAGAGAAAAGAATTGAGAGAAGCATTAACTAGAAAGGGAGAAGTGTCACGAAGTACCATCGGTGGAGAAGATTTGGTTCAGAATATGATGTGTTATCTCTTACCAGATTCTGAAAATATATTCAAGCGTCATGGGGTCAAAGAAATTAAATCAATGGCATTGCTTCGAGTTGCAACCCAGGATGCAATTCATCAGCTTTCCACCCAAAGCAGTGTTCAGGTTGATGTAGATTTGGGAGATGGTTTGAAGATATGCAAGGTTGTTGACAGGGCGGAGTTTGAGGAGGTGAACAAAGAGGTGTTCGAAAAGTGTGAAAGCCTTATCATCCAATGTTTACATGATGCAAAGGTAGAAGTTGGGGATATAAATGATGTGATACTTGTTGGAGGATGTTCTTATATCCCAAGGGTGGAGAATCTTGTTACAACCTTATGCATAATAACAGAAGTTTATAAAGGTATAAACCCTTTGGAAGGTGCGGTTTGTGGTGCAGCAATGGAAGGAGCTGTTGCTTCAGGCATCAGTGATCCCTTTGGAAACTTGGACTTGTTAACGATTCAAGCCACTCCTCTTGCCATTGGAATTCGAGCTGATGGGAACAAGTTTGTACCTGTAATTCCAAGGAACACCACAATGCCAGCACGTAAAGATCTACTTTTCACAACTATTCATGATAATCAAACTGAGGCATTGATACTTGTGTACGAAGGTGAGGGAAAGAAGGCAGAAGAAAACCACTTGTTAGGATATTTCAAGATAATGGGAATACCTGCAGCACCAAAAGGAGTTCCTGAAATCAGTGTGTGCATGGACATAGATGCTGCAAACGTGCTGCGAGTTTTAGCCGGTGTTGTGATGCCTGGATCCCGTATACCTGTGGTGCCTGTTATGGAAGTGAGGATGCCAATGGTTGATGATGGTCATGGTTGGTGTGCTGAGGCCCTAAATAGGACCTATGGTGCCACAATGGATTTGGTTACCCTCAAGAAGGCATAA
Protein sequence

>Msa0751570

MVFQQEKSNVAGEWWKKERFKRKELREALTRKGEVSRSTIGGEDLVQNMMCYLLPDSENIFKRHGVKEIKSMALLRVATQDAIHQLSTQSSVQVDVDLGDGLKICKVVDRAEFEEVNKEVFEKCESLIIQCLHDAKVEVGDINDVILVGGCSYIPRVENLVTTLCIITEVYKGINPLEGAVCGAAMEGAVASGISDPFGNLDLLTIQATPLAIGIRADGNKFVPVIPRNTTMPARKDLLFTTIHDNQTEALILVYEGEGKKAEENHLLGYFKIMGIPAAPKGVPEISVCMDIDAANVLRVLAGVVMPGSRIPVVPVMEVRMPMVDDGHGWCAEALNRTYGATMDLVTLKKA*