Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026300 | XP_039684190.1 | 92.749 | 331 | 24 | 0 | 1 | 331 | 1 | 331 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026300 | sp|F4HNU8|OFP4_ARATH | 31.436 | 369 | 157 | 15 | 1 | 333 | 1 | 309 | 3.94e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026300 | A0A072U1F0 | 90.029 | 341 | 24 | 1 | 1 | 331 | 1 | 341 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1026300 | TF | OFP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0546490 | Msa1026300 | 0.808221 | 3.445461e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026300 | MtrunA17_Chr7g0244571 | 90.029 | 341 | 24 | 1 | 1 | 331 | 1 | 341 | 0.0 | 574 |
| Msa1026300 | MtrunA17_Chr4g0013081 | 45.387 | 401 | 122 | 15 | 1 | 331 | 1 | 374 | 1.05e-76 | 241 |
| Msa1026300 | MtrunA17_Chr5g0432531 | 47.396 | 192 | 84 | 6 | 128 | 319 | 60 | 234 | 5.12e-40 | 142 |
| Msa1026300 | MtrunA17_Chr8g0379681 | 49.315 | 73 | 33 | 1 | 271 | 339 | 258 | 330 | 9.60e-15 | 74.3 |
| Msa1026300 | MtrunA17_Chr1g0157251 | 56.522 | 69 | 20 | 2 | 286 | 354 | 362 | 420 | 1.58e-14 | 74.3 |
| Msa1026300 | MtrunA17_Chr2g0284471 | 57.143 | 49 | 21 | 0 | 271 | 319 | 247 | 295 | 1.29e-13 | 70.9 |
| Msa1026300 | MtrunA17_Chr8g0390531 | 45.588 | 68 | 33 | 1 | 271 | 334 | 258 | 325 | 4.20e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1026300 | AT1G06920.1 | 31.436 | 369 | 157 | 15 | 1 | 333 | 1 | 309 | 4.00e-30 | 117 |
| Msa1026300 | AT2G30400.1 | 30.495 | 364 | 168 | 9 | 1 | 331 | 1 | 312 | 6.07e-29 | 114 |
| Msa1026300 | AT5G58360.1 | 29.714 | 350 | 155 | 12 | 1 | 328 | 5 | 285 | 1.21e-25 | 105 |
| Msa1026300 | AT5G01840.1 | 31.548 | 336 | 147 | 10 | 1 | 331 | 1 | 258 | 2.60e-23 | 98.2 |
| Msa1026300 | AT4G18830.1 | 34.286 | 105 | 61 | 1 | 235 | 331 | 238 | 342 | 1.42e-12 | 68.6 |
Find 54 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACGGTCTGTTCTGATTTC+TGG | 0.132362 | 7_1:+58019956 | None:intergenic |
| AATGATGAACACAACGTTAA+AGG | 0.235673 | 7_1:-58019731 | Msa1026300:CDS |
| TTCTTCCTTTGTTGTGTTGT+TGG | 0.243928 | 7_1:+58020229 | None:intergenic |
| CAGATCACCTATTAGGATTC+TGG | 0.295667 | 7_1:-58015606 | Msa1026300:intron |
| CATTAGAACATCAAAGGATT+TGG | 0.325611 | 7_1:-58019426 | Msa1026300:CDS |
| AGTGTCCATTCCCTCCCAAT+TGG | 0.326550 | 7_1:+58015509 | None:intergenic |
| AACGTTTACTCTGCAATCAT+TGG | 0.347567 | 7_1:-58015572 | Msa1026300:CDS |
| TTTGTTGTGTTGTTGGTGTT+TGG | 0.367246 | 7_1:+58020236 | None:intergenic |
| TGTAGATTCTAGTGCTTGTT+TGG | 0.386092 | 7_1:+58020107 | None:intergenic |
| ATGATGAACACAACGTTAAA+GGG | 0.389606 | 7_1:-58019730 | Msa1026300:CDS |
| GATGGTTCATGGAGCCCAAT+TGG | 0.392293 | 7_1:-58015524 | Msa1026300:CDS |
| TACGTCTTCCACCATCGTTT+CGG | 0.400519 | 7_1:-58019555 | Msa1026300:CDS |
| CCATCGTTTCGGCTGGCAAC+CGG | 0.420330 | 7_1:-58019544 | Msa1026300:CDS |
| GTGTCCATTCCCTCCCAATT+GGG | 0.422900 | 7_1:+58015510 | None:intergenic |
| ACGTTTACTCTGCAATCATT+GGG | 0.428746 | 7_1:-58015571 | Msa1026300:CDS |
| GTTCACCAGGTGTGAAACTT+AGG | 0.443025 | 7_1:-58019631 | Msa1026300:CDS |
| TCTGTTCTGATTTCTGGCTC+AGG | 0.447190 | 7_1:+58019962 | None:intergenic |
| TCTGGTTTGGTCACAATTGG+TGG | 0.452293 | 7_1:+58019821 | None:intergenic |
| TTTCTTGGATTGCTTTGGTA+GGG | 0.457667 | 7_1:+58020157 | None:intergenic |
| GGAGATGATGATGAAGTCTT+TGG | 0.474574 | 7_1:+58020028 | None:intergenic |
| CAGACATGATGCCTAATGCT+TGG | 0.484513 | 7_1:-58020294 | Msa1026300:CDS |
| CTGTTCTGATTTCTGGCTCA+GGG | 0.485970 | 7_1:+58019963 | None:intergenic |
| ATGGTTCATGGAGCCCAATT+GGG | 0.486106 | 7_1:-58015523 | Msa1026300:CDS |
| AGCTTGTAAAACCAAGCATT+AGG | 0.493200 | 7_1:+58020283 | None:intergenic |
| TGAAGATTGAAGATGGTTCA+TGG | 0.498084 | 7_1:-58015535 | Msa1026300:CDS |
| TGCAGAGTAAACGTTGTGAT+TGG | 0.503378 | 7_1:+58015580 | None:intergenic |
| GGAGCCCAATTGGGAGGGAA+TGG | 0.509644 | 7_1:-58015514 | Msa1026300:CDS |
| AGATTCTCTGTTAGTTCACC+AGG | 0.512695 | 7_1:-58019644 | Msa1026300:CDS |
| ATTCACCAAGAATTTCAAAC+CGG | 0.519789 | 7_1:-58019604 | Msa1026300:CDS |
| TCTTCCACCATCGTTTCGGC+TGG | 0.529072 | 7_1:-58019551 | Msa1026300:CDS |
| CTATCAAGTGGAGAATCAAA+TGG | 0.529685 | 7_1:+58020007 | None:intergenic |
| ACTCATCTGAATTCAAAGAA+AGG | 0.530280 | 7_1:+58019384 | None:intergenic |
| CTAACAGAGAATCTTCTACT+TGG | 0.532521 | 7_1:+58019653 | None:intergenic |
| AGGAGATTTCAGAGAATCAA+TGG | 0.535981 | 7_1:-58019471 | Msa1026300:CDS |
| CTTCACAATTGCAAAACTAT+CGG | 0.538926 | 7_1:+58019511 | None:intergenic |
| GAACAACATTAGAACATCAA+AGG | 0.551741 | 7_1:-58019432 | Msa1026300:CDS |
| GGAAAATTCAAACACATGGC+CGG | 0.552191 | 7_1:-58019583 | Msa1026300:CDS |
| AACTATCGGAAAGACTTCTC+CGG | 0.559644 | 7_1:+58019525 | None:intergenic |
| AAACACCAACAACACAACAA+AGG | 0.563217 | 7_1:-58020234 | Msa1026300:CDS |
| TCGATTATGATGTCGTTCGT+CGG | 0.569783 | 7_1:+58019926 | None:intergenic |
| GTTGCCAGCCGAAACGATGG+TGG | 0.586748 | 7_1:+58019547 | None:intergenic |
| CCGGTTGCCAGCCGAAACGA+TGG | 0.591822 | 7_1:+58019544 | None:intergenic |
| GTTCATGGAGCCCAATTGGG+AGG | 0.610714 | 7_1:-58015520 | Msa1026300:CDS |
| AACCGGAAAATTCAAACACA+TGG | 0.611341 | 7_1:-58019587 | Msa1026300:CDS |
| GATTCTGCAGAGCTATCAAG+TGG | 0.613063 | 7_1:+58019995 | None:intergenic |
| GTGTGCATGAAGATTGAAGA+TGG | 0.613954 | 7_1:-58015542 | Msa1026300:CDS |
| TTCATGGAGCCCAATTGGGA+GGG | 0.619183 | 7_1:-58015519 | Msa1026300:CDS |
| CGTTTACTCTGCAATCATTG+GGG | 0.626460 | 7_1:-58015570 | Msa1026300:CDS |
| GATTCTCTGAAATCTCCTTG+CGG | 0.628215 | 7_1:+58019476 | None:intergenic |
| AAGTCATCATTGAATCCGCA+AGG | 0.629438 | 7_1:-58019491 | Msa1026300:CDS |
| TTGATCCTAAGTTTCACACC+TGG | 0.631177 | 7_1:+58019626 | None:intergenic |
| AGATTTCAGAGAATCAATGG+TGG | 0.652480 | 7_1:-58019468 | Msa1026300:CDS |
| ATCACCTATTAGGATTCTGG+AGG | 0.686114 | 7_1:-58015603 | Msa1026300:intron |
| CGTTCGTCGGAAGAAGAACA+CGG | 0.706093 | 7_1:+58019939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTCAAAAAAAAAAAAA+TGG | - | chr7_1:58016824-58016843 | Msa1026300:intron | 10.0% |
| !! | TAAATATATTTACGTAAAAA+TGG | + | chr7_1:58017144-58017163 | None:intergenic | 10.0% |
| !!! | TAAAGTTATACTTTTTTAAA+AGG | - | chr7_1:58017323-58017342 | Msa1026300:intron | 10.0% |
| !!! | AAAGTTATACTTTTTTAAAA+GGG | - | chr7_1:58017324-58017343 | Msa1026300:intron | 10.0% |
| !!! | AACTTTTTTTTTTTTTGAAT+CGG | + | chr7_1:58018309-58018328 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTAAGTTTTAAAT+AGG | - | chr7_1:58018390-58018409 | Msa1026300:intron | 10.0% |
| !! | CATTAAATAATTTATGTATT+TGG | + | chr7_1:58019030-58019049 | None:intergenic | 10.0% |
| !!! | TACATAAATTTTAAATTTGA+GGG | + | chr7_1:58020040-58020059 | None:intergenic | 10.0% |
| !!! | TATAAGTTATAAATTTTATG+GGG | + | chr7_1:58020070-58020089 | None:intergenic | 10.0% |
| !!! | CATATAAGTTATAAATTTTA+TGG | + | chr7_1:58020072-58020091 | None:intergenic | 10.0% |
| !! | AATATATAATTTACTATATG+TGG | - | chr7_1:58020176-58020195 | Msa1026300:CDS | 10.0% |
| !! | TTTCAATTCTTTACTTAAAA+TGG | - | chr7_1:58016719-58016738 | Msa1026300:intron | 15.0% |
| !! | CAAAAAAAAAAAAATGGAAT+TGG | - | chr7_1:58016830-58016849 | Msa1026300:intron | 15.0% |
| !!! | AAGTTATACTTTTTTAAAAG+GGG | - | chr7_1:58017325-58017344 | Msa1026300:intron | 15.0% |
| !! | TTATTACTAATAAGAAAATG+TGG | - | chr7_1:58017388-58017407 | Msa1026300:intron | 15.0% |
| !! | TTGTAAAAATTGATCAAAAT+TGG | - | chr7_1:58017669-58017688 | Msa1026300:intron | 15.0% |
| !! | AAAAAGTTTGACAAAAATAT+TGG | - | chr7_1:58018321-58018340 | Msa1026300:intron | 15.0% |
| !! | CTTTCATTCAAAAATTTAAA+AGG | - | chr7_1:58018841-58018860 | Msa1026300:intron | 15.0% |
| !!! | TTGTAGATTTTTTTTTCTTT+TGG | - | chr7_1:58019220-58019239 | Msa1026300:intron | 15.0% |
| !!! | ACATAAATTTTAAATTTGAG+GGG | + | chr7_1:58020039-58020058 | None:intergenic | 15.0% |
| !!! | CTACATAAATTTTAAATTTG+AGG | + | chr7_1:58020041-58020060 | None:intergenic | 15.0% |
| !!! | TTACATATAAGTTTTAACTT+TGG | + | chr7_1:58020107-58020126 | None:intergenic | 15.0% |
| !! | TTCTTTACTTAAAATGGAAA+AGG | - | chr7_1:58016725-58016744 | Msa1026300:intron | 20.0% |
| !! | TCTTTACTTAAAATGGAAAA+GGG | - | chr7_1:58016726-58016745 | Msa1026300:intron | 20.0% |
| !! | AATTTAATGTAGAATGTCAA+AGG | - | chr7_1:58016777-58016796 | Msa1026300:intron | 20.0% |
| !! | CTATAACTTAGTCTAAATTA+GGG | + | chr7_1:58016883-58016902 | None:intergenic | 20.0% |
| !! | ACTATAACTTAGTCTAAATT+AGG | + | chr7_1:58016884-58016903 | None:intergenic | 20.0% |
| !!! | TAAGTTATAGTTGATACATA+TGG | - | chr7_1:58016893-58016912 | Msa1026300:intron | 20.0% |
| !!! | TTTGAAATAAGTATTTGTGA+CGG | - | chr7_1:58017217-58017236 | Msa1026300:intron | 20.0% |
| !! | ATCTCAAATAAGATTATCTT+TGG | - | chr7_1:58017509-58017528 | Msa1026300:intron | 20.0% |
| !!! | GAAAATAAAGTGTTAGAAAT+GGG | - | chr7_1:58017727-58017746 | Msa1026300:intron | 20.0% |
| !!! | AAAATAAAGTGTTAGAAATG+GGG | - | chr7_1:58017728-58017747 | Msa1026300:intron | 20.0% |
| !! | TTCATATTCATTAATTCAAG+AGG | - | chr7_1:58017766-58017785 | Msa1026300:intron | 20.0% |
| !!! | TTTTTTCTTATATTTGAGAC+CGG | + | chr7_1:58017829-58017848 | None:intergenic | 20.0% |
| !!! | TACGAAAATATTCCTTTTTT+AGG | + | chr7_1:58017928-58017947 | None:intergenic | 20.0% |
| !! | TGACAATAGAAATAAAACAA+TGG | + | chr7_1:58018064-58018083 | None:intergenic | 20.0% |
| !!! | GTTTGTTATAAGTTTTCAAT+AGG | - | chr7_1:58018357-58018376 | Msa1026300:intron | 20.0% |
| !! | GAAACTTAAAAACTTCTAAT+AGG | + | chr7_1:58018441-58018460 | None:intergenic | 20.0% |
| !!! | GAAGTTTTTAAGTTTCAAAT+AGG | - | chr7_1:58018445-58018464 | Msa1026300:intron | 20.0% |
| !! | TTGAAACATGAAAAACTTAA+AGG | - | chr7_1:58018494-58018513 | Msa1026300:intron | 20.0% |
| !! | GAAAAACTTAAAGGATTAAA+TGG | - | chr7_1:58018503-58018522 | Msa1026300:intron | 20.0% |
| !!! | TTTTATTTTTCACAAACAAG+AGG | + | chr7_1:58019179-58019198 | None:intergenic | 20.0% |
| !!! | TTTGATTTTCAAAAGCTAAA+GGG | - | chr7_1:58019442-58019461 | Msa1026300:CDS | 20.0% |
| !! | ACATAAATGTTAAATTTCAG+GGG | + | chr7_1:58019976-58019995 | None:intergenic | 20.0% |
| !! | CACATAAATGTTAAATTTCA+GGG | + | chr7_1:58019977-58019996 | None:intergenic | 20.0% |
| !! | ACATTAATGTTAAATTTCAG+GGG | + | chr7_1:58020008-58020027 | None:intergenic | 20.0% |
| !! | CACATTAATGTTAAATTTCA+GGG | + | chr7_1:58020009-58020028 | None:intergenic | 20.0% |
| !!! | CATAAATTTTAAATTTGAGG+GGG | + | chr7_1:58020038-58020057 | None:intergenic | 20.0% |
| !! | GTAAAGTAGTAAGATTTTCT+TGG | + | chr7_1:58015673-58015692 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGATGATTTTCT+TGG | + | chr7_1:58015742-58015761 | None:intergenic | 25.0% |
| !! | TTTGATGAATTTTTGCTTCT+GGG | + | chr7_1:58016063-58016082 | None:intergenic | 25.0% |
| !! | ATTTGATGAATTTTTGCTTC+TGG | + | chr7_1:58016064-58016083 | None:intergenic | 25.0% |
| !! | ACTAAAAGTCAAGATTTTGA+AGG | - | chr7_1:58016107-58016126 | Msa1026300:intron | 25.0% |
| !! | AGAATTGTTCTACTGATTAT+CGG | + | chr7_1:58016502-58016521 | None:intergenic | 25.0% |
| !!! | GGGATTATATTTTGAACTTA+AGG | - | chr7_1:58017345-58017364 | Msa1026300:intron | 25.0% |
| !!! | TCAACTTGAGTTTTTTATGA+CGG | + | chr7_1:58017613-58017632 | None:intergenic | 25.0% |
| !! | GGAAAATAAAGTGTTAGAAA+TGG | - | chr7_1:58017726-58017745 | Msa1026300:intron | 25.0% |
| !!! | TATTTTCGTATATTTGAGAC+CGG | - | chr7_1:58017938-58017957 | Msa1026300:intron | 25.0% |
| ! | GGAATATAAACGTGTAAAAA+TGG | - | chr7_1:58017963-58017982 | Msa1026300:intron | 25.0% |
| ! | TAAAAAAAGATTGCCACTAT+TGG | - | chr7_1:58018038-58018057 | Msa1026300:intron | 25.0% |
| ! | ACTTTAAATGGAAGAAATTG+TGG | + | chr7_1:58018232-58018251 | None:intergenic | 25.0% |
| ! | TTTCAAATAGGTCGATAAAA+GGG | - | chr7_1:58018457-58018476 | Msa1026300:intron | 25.0% |
| !!! | GGTATTTTTGTCAAACTTAA+AGG | - | chr7_1:58018524-58018543 | Msa1026300:intron | 25.0% |
| ! | ACAATTTGCACTTATAAGTT+AGG | - | chr7_1:58018691-58018710 | Msa1026300:intron | 25.0% |
| ! | TGTGTACTTCAAACTTAAAA+GGG | + | chr7_1:58018804-58018823 | None:intergenic | 25.0% |
| ! | TTGTGTACTTCAAACTTAAA+AGG | + | chr7_1:58018805-58018824 | None:intergenic | 25.0% |
| ! | AATGAAAGACGAAAAATCAA+AGG | + | chr7_1:58018829-58018848 | None:intergenic | 25.0% |
| !! | TTTTCTCTTGTAAATAAGAC+CGG | + | chr7_1:58018957-58018976 | None:intergenic | 25.0% |
| ! | GTAAATTGTCTCTTGTAAAT+AGG | - | chr7_1:58019060-58019079 | Msa1026300:intron | 25.0% |
| ! | TGAATTTCAAGGTTCTTATA+GGG | + | chr7_1:58019341-58019360 | None:intergenic | 25.0% |
| ! | TTGAATTTCAAGGTTCTTAT+AGG | + | chr7_1:58019342-58019361 | None:intergenic | 25.0% |
| ! | GTATAGCAATTTGAATTTCA+AGG | + | chr7_1:58019352-58019371 | None:intergenic | 25.0% |
| !!! | GTTTGATTTTCAAAAGCTAA+AGG | - | chr7_1:58019441-58019460 | Msa1026300:CDS | 25.0% |
| ! | ACTTCGTTTATTACAAAAGT+TGG | - | chr7_1:58019472-58019491 | Msa1026300:CDS | 25.0% |
| ! | TTGATATTTCGTTAACTACA+GGG | + | chr7_1:58019671-58019690 | None:intergenic | 25.0% |
| ! | ATTGATATTTCGTTAACTAC+AGG | + | chr7_1:58019672-58019691 | None:intergenic | 25.0% |
| ! | TGACTAACGTTTATCAATTT+CGG | + | chr7_1:58019702-58019721 | None:intergenic | 25.0% |
| !!! | CACAAATGTTGATTTTGAAA+AGG | + | chr7_1:58019929-58019948 | None:intergenic | 25.0% |
| ! | CATAAATGTTAAATTTCAGG+GGG | + | chr7_1:58019975-58019994 | None:intergenic | 25.0% |
| ! | GCACATAAATGTTAAATTTC+AGG | + | chr7_1:58019978-58019997 | None:intergenic | 25.0% |
| ! | ATTAATGTTAAATTTCAGGG+GGG | + | chr7_1:58020006-58020025 | None:intergenic | 25.0% |
| ! | CATTAATGTTAAATTTCAGG+GGG | + | chr7_1:58020007-58020026 | None:intergenic | 25.0% |
| ! | GCACATTAATGTTAAATTTC+AGG | + | chr7_1:58020010-58020029 | None:intergenic | 25.0% |
| !!! | TATAAGTTTTAACTTTGGAG+AGG | + | chr7_1:58020102-58020121 | None:intergenic | 25.0% |
| !!! | CATCAAAGTTTTATGATTCA+AGG | + | chr7_1:58020136-58020155 | None:intergenic | 25.0% |
| ! | CTTGAATCATAAAACTTTGA+TGG | - | chr7_1:58020134-58020153 | Msa1026300:CDS | 25.0% |
| ! | TTTTACAAGCTTAGAGACAT+GGG | - | chr7_1:58015541-58015560 | Msa1026300:CDS | 30.0% |
| !!! | CTTTGTTTTTGATGTGTTTG+AGG | + | chr7_1:58015632-58015651 | None:intergenic | 30.0% |
| ! | AAGATTTTCTTGGATTGCTT+TGG | + | chr7_1:58015663-58015682 | None:intergenic | 30.0% |
| !!! | TTTGATGATGATTTTCTTGG+TGG | + | chr7_1:58015739-58015758 | None:intergenic | 30.0% |
| ! | ATCAAGTAGTTGAACTTTTC+TGG | + | chr7_1:58016012-58016031 | None:intergenic | 30.0% |
| AATGATGAACACAACGTTAA+AGG | - | chr7_1:58016081-58016100 | Msa1026300:intron | 30.0% | |
| ATGATGAACACAACGTTAAA+GGG | - | chr7_1:58016082-58016101 | Msa1026300:intron | 30.0% | |
| ATTCACCAAGAATTTCAAAC+CGG | - | chr7_1:58016208-58016227 | Msa1026300:intron | 30.0% | |
| !! | ATTTTCCGGTTTGAAATTCT+TGG | + | chr7_1:58016216-58016235 | None:intergenic | 30.0% |
| CTTCACAATTGCAAAACTAT+CGG | + | chr7_1:58016304-58016323 | None:intergenic | 30.0% | |
| GAACAACATTAGAACATCAA+AGG | - | chr7_1:58016380-58016399 | Msa1026300:intron | 30.0% | |
| CATTAGAACATCAAAGGATT+TGG | - | chr7_1:58016386-58016405 | Msa1026300:intron | 30.0% | |
| ACTCATCTGAATTCAAAGAA+AGG | + | chr7_1:58016431-58016450 | None:intergenic | 30.0% | |
| ! | TCAAAGTGTTCAAGCAAATA+TGG | - | chr7_1:58016466-58016485 | Msa1026300:intron | 30.0% |
| !! | AATGTCAAAGGTGTTTGTAA+TGG | - | chr7_1:58016789-58016808 | Msa1026300:intron | 30.0% |
| !! | AAAGGTGTTTGTAATGGAAT+TGG | - | chr7_1:58016795-58016814 | Msa1026300:intron | 30.0% |
| ! | GTAGACAAATATAGTTGATG+CGG | - | chr7_1:58016979-58016998 | Msa1026300:intron | 30.0% |
| !!! | TCATAAGAGTCCATCTTTTT+TGG | + | chr7_1:58017439-58017458 | None:intergenic | 30.0% |
| !!! | TCTAACACTTTATTTTCCCA+TGG | + | chr7_1:58017724-58017743 | None:intergenic | 30.0% |
| CATTGAGTAGTTAATGTATC+TGG | + | chr7_1:58017903-58017922 | None:intergenic | 30.0% | |
| CTACTCAATGAACCTAAAAA+AGG | - | chr7_1:58017913-58017932 | Msa1026300:intron | 30.0% | |
| ! | GTACACAATTTAGCTTCATT+TGG | - | chr7_1:58017989-58018008 | Msa1026300:intron | 30.0% |
| CTTTCTAAACACACATGAAA+TGG | + | chr7_1:58018016-58018035 | None:intergenic | 30.0% | |
| AATAAAACAATGGCCAATAG+TGG | + | chr7_1:58018054-58018073 | None:intergenic | 30.0% | |
| GTTTCAAATAGGTCGATAAA+AGG | - | chr7_1:58018456-58018475 | Msa1026300:intron | 30.0% | |
| GTGTACTTCAAACTTAAAAG+GGG | + | chr7_1:58018803-58018822 | None:intergenic | 30.0% | |
| AAAAAGCTATATACTTCGTC+CGG | - | chr7_1:58018935-58018954 | Msa1026300:intron | 30.0% | |
| !!! | CTTGTACGCAATTTTTTAAG+AGG | - | chr7_1:58019137-58019156 | Msa1026300:intron | 30.0% |
| AATTTCAAGGTTCTTATAGG+GGG | + | chr7_1:58019339-58019358 | None:intergenic | 30.0% | |
| GAATTTCAAGGTTCTTATAG+GGG | + | chr7_1:58019340-58019359 | None:intergenic | 30.0% | |
| CATTAAACCCTATGAAACTT+TGG | - | chr7_1:58019384-58019403 | Msa1026300:intron | 30.0% | |
| TTCTCATCCAAAGTTTCATA+GGG | + | chr7_1:58019394-58019413 | None:intergenic | 30.0% | |
| TTTCTCATCCAAAGTTTCAT+AGG | + | chr7_1:58019395-58019414 | None:intergenic | 30.0% | |
| TGATATTTCGTTAACTACAG+GGG | + | chr7_1:58019670-58019689 | None:intergenic | 30.0% | |
| ACTAACGTTTATCAATTTCG+GGG | + | chr7_1:58019700-58019719 | None:intergenic | 30.0% | |
| GACTAACGTTTATCAATTTC+GGG | + | chr7_1:58019701-58019720 | None:intergenic | 30.0% | |
| ATCATAACAGATCACCTATT+AGG | - | chr7_1:58020199-58020218 | Msa1026300:CDS | 30.0% | |
| AGCTTGTAAAACCAAGCATT+AGG | + | chr7_1:58015532-58015551 | None:intergenic | 35.0% | |
| ! | GTTTTACAAGCTTAGAGACA+TGG | - | chr7_1:58015540-58015559 | Msa1026300:CDS | 35.0% |
| ! | TTTGTTGTGTTGTTGGTGTT+TGG | + | chr7_1:58015579-58015598 | None:intergenic | 35.0% |
| AAACACCAACAACACAACAA+AGG | - | chr7_1:58015578-58015597 | Msa1026300:CDS | 35.0% | |
| ! | TTCTTCCTTTGTTGTGTTGT+TGG | + | chr7_1:58015586-58015605 | None:intergenic | 35.0% |
| TTTCTTGGATTGCTTTGGTA+GGG | + | chr7_1:58015658-58015677 | None:intergenic | 35.0% | |
| ! | TTTTCTTGGATTGCTTTGGT+AGG | + | chr7_1:58015659-58015678 | None:intergenic | 35.0% |
| TGTAGATTCTAGTGCTTGTT+TGG | + | chr7_1:58015708-58015727 | None:intergenic | 35.0% | |
| !!! | GTCTTTGGTGTTCTTCTTTT+TGG | + | chr7_1:58015772-58015791 | None:intergenic | 35.0% |
| CTATCAAGTGGAGAATCAAA+TGG | + | chr7_1:58015808-58015827 | None:intergenic | 35.0% | |
| !!! | TTTTCTGGTTTGGTCACAAT+TGG | + | chr7_1:58015997-58016016 | None:intergenic | 35.0% |
| !!! | GTAGTTGAACTTTTCTGGTT+TGG | + | chr7_1:58016007-58016026 | None:intergenic | 35.0% |
| !! | AGATTTTGAAGGAAGAACAG+AGG | - | chr7_1:58016118-58016137 | Msa1026300:intron | 35.0% |
| CTAACAGAGAATCTTCTACT+TGG | + | chr7_1:58016162-58016181 | None:intergenic | 35.0% | |
| AACCGGAAAATTCAAACACA+TGG | - | chr7_1:58016225-58016244 | Msa1026300:intron | 35.0% | |
| AGGAGATTTCAGAGAATCAA+TGG | - | chr7_1:58016341-58016360 | Msa1026300:intron | 35.0% | |
| AGATTTCAGAGAATCAATGG+TGG | - | chr7_1:58016344-58016363 | Msa1026300:intron | 35.0% | |
| CTCAAGATCGACTAATCAAA+GGG | - | chr7_1:58016544-58016563 | Msa1026300:intron | 35.0% | |
| TCAAGATCGACTAATCAAAG+GGG | - | chr7_1:58016545-58016564 | Msa1026300:intron | 35.0% | |
| TGGAATTGGACTGTATGTAA+TGG | - | chr7_1:58016844-58016863 | Msa1026300:intron | 35.0% | |
| CAGACATATAATAGCACTCA+TGG | - | chr7_1:58017250-58017269 | Msa1026300:intron | 35.0% | |
| AGAAAATGTGGATACACCAA+TGG | - | chr7_1:58017400-58017419 | Msa1026300:intron | 35.0% | |
| GAAAATGTGGATACACCAAT+GGG | - | chr7_1:58017401-58017420 | Msa1026300:intron | 35.0% | |
| AAAATGTGGATACACCAATG+GGG | - | chr7_1:58017402-58017421 | Msa1026300:intron | 35.0% | |
| TTGAGTCTAGCCAAAAAAGA+TGG | - | chr7_1:58017426-58017445 | Msa1026300:intron | 35.0% | |
| ! | AAAGATGGACTCTTATGATG+TGG | - | chr7_1:58017441-58017460 | Msa1026300:intron | 35.0% |
| ACCATTTGTTTGATCGCAAT+AGG | - | chr7_1:58017561-58017580 | Msa1026300:intron | 35.0% | |
| CCATTTGTTTGATCGCAATA+GGG | - | chr7_1:58017562-58017581 | Msa1026300:intron | 35.0% | |
| CATTTGTTTGATCGCAATAG+GGG | - | chr7_1:58017563-58017582 | Msa1026300:intron | 35.0% | |
| GCTCTTAATTACTACTACCA+TGG | - | chr7_1:58017691-58017710 | Msa1026300:intron | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr7_1:58017825-58017844 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr7_1:58017826-58017845 | None:intergenic | 35.0% |
| TTACACGTTTATATTCCCTC+CGG | + | chr7_1:58017960-58017979 | None:intergenic | 35.0% | |
| TCATCTTCGACAACAATACT+TGG | - | chr7_1:58018081-58018100 | Msa1026300:intron | 35.0% | |
| TCTTATTCTGCAACCTCTTT+GGG | + | chr7_1:58018158-58018177 | None:intergenic | 35.0% | |
| GTTGCAGAATAAGACATAAC+TGG | - | chr7_1:58018164-58018183 | Msa1026300:intron | 35.0% | |
| TAGGTCGATAAAAGGGTAAT+AGG | - | chr7_1:58018464-58018483 | Msa1026300:intron | 35.0% | |
| AGGTCGATAAAAGGGTAATA+GGG | - | chr7_1:58018465-58018484 | Msa1026300:intron | 35.0% | |
| CATCGTAAATGCAGAGAAAA+AGG | - | chr7_1:58018619-58018638 | Msa1026300:intron | 35.0% | |
| TTGTCTCTTGTAAATAGGAC+CGG | - | chr7_1:58019065-58019084 | Msa1026300:intron | 35.0% | |
| !! | TTTTCTTTTGGTGACTTCGT+TGG | - | chr7_1:58019232-58019251 | Msa1026300:intron | 35.0% |
| GAACTATTTAACCCACTCTT+GGG | + | chr7_1:58019572-58019591 | None:intergenic | 35.0% | |
| TGAACTATTTAACCCACTCT+TGG | + | chr7_1:58019573-58019592 | None:intergenic | 35.0% | |
| ATATTTCGTTAACTACAGGG+GGG | + | chr7_1:58019668-58019687 | None:intergenic | 35.0% | |
| GATATTTCGTTAACTACAGG+GGG | + | chr7_1:58019669-58019688 | None:intergenic | 35.0% | |
| TAACGTTTATCAATTTCGGG+GGG | + | chr7_1:58019698-58019717 | None:intergenic | 35.0% | |
| CTAACGTTTATCAATTTCGG+GGG | + | chr7_1:58019699-58019718 | None:intergenic | 35.0% | |
| TGTTGGATGGAGGAAATTAA+CGG | + | chr7_1:58019736-58019755 | None:intergenic | 35.0% | |
| AACGTTTACTCTGCAATCAT+TGG | - | chr7_1:58020240-58020259 | Msa1026300:CDS | 35.0% | |
| ACGTTTACTCTGCAATCATT+GGG | - | chr7_1:58020241-58020260 | Msa1026300:CDS | 35.0% | |
| TGAAGATTGAAGATGGTTCA+TGG | - | chr7_1:58020277-58020296 | Msa1026300:CDS | 35.0% | |
| ! | GGAGATGATGATGAAGTCTT+TGG | + | chr7_1:58015787-58015806 | None:intergenic | 40.0% |
| TCGATTATGATGTCGTTCGT+CGG | + | chr7_1:58015889-58015908 | None:intergenic | 40.0% | |
| AGATTCTCTGTTAGTTCACC+AGG | - | chr7_1:58016168-58016187 | Msa1026300:intron | 40.0% | |
| TTGATCCTAAGTTTCACACC+TGG | + | chr7_1:58016189-58016208 | None:intergenic | 40.0% | |
| ! | GGCCATGTGTTTGAATTTTC+CGG | + | chr7_1:58016230-58016249 | None:intergenic | 40.0% |
| GGAAAATTCAAACACATGGC+CGG | - | chr7_1:58016229-58016248 | Msa1026300:intron | 40.0% | |
| AACTATCGGAAAGACTTCTC+CGG | + | chr7_1:58016290-58016309 | None:intergenic | 40.0% | |
| AAGTCATCATTGAATCCGCA+AGG | - | chr7_1:58016321-58016340 | Msa1026300:intron | 40.0% | |
| !! | GATTCTCTGAAATCTCCTTG+CGG | + | chr7_1:58016339-58016358 | None:intergenic | 40.0% |
| TCGATCTTGAGCGAAATACA+GGG | + | chr7_1:58016535-58016554 | None:intergenic | 40.0% | |
| GCTCAAGATCGACTAATCAA+AGG | - | chr7_1:58016543-58016562 | Msa1026300:intron | 40.0% | |
| ATTAAATGTGACCCCACTAG+TGG | + | chr7_1:58016585-58016604 | None:intergenic | 40.0% | |
| CCCTATTGCGATCAAACAAA+TGG | + | chr7_1:58017565-58017584 | None:intergenic | 40.0% | |
| ! | TTTCGTATATTTGAGACCGG+AGG | - | chr7_1:58017941-58017960 | Msa1026300:intron | 40.0% |
| ! | TTCGTATATTTGAGACCGGA+GGG | - | chr7_1:58017942-58017961 | Msa1026300:intron | 40.0% |
| ! | GTCTTATTCTGCAACCTCTT+TGG | + | chr7_1:58018159-58018178 | None:intergenic | 40.0% |
| ! | TTTCTAGTGAATACTCCCTC+CGG | + | chr7_1:58019087-58019106 | None:intergenic | 40.0% |
| !!! | GTGACTTCGTTGGTTTTCTT+CGG | - | chr7_1:58019242-58019261 | Msa1026300:intron | 40.0% |
| ! | TTCGGAGTTCTGATGAGATT+CGG | - | chr7_1:58019260-58019279 | Msa1026300:intron | 40.0% |
| ! | TTCACCTTGTCTTTTGCGAT+AGG | - | chr7_1:58019533-58019552 | Msa1026300:CDS | 40.0% |
| TAAGCCTATCGCAAAAGACA+AGG | + | chr7_1:58019540-58019559 | None:intergenic | 40.0% | |
| ! | TCTTTTGCGATAGGCTTACA+TGG | - | chr7_1:58019542-58019561 | Msa1026300:CDS | 40.0% |
| TATTTAACCCACTCTTGGGA+GGG | + | chr7_1:58019568-58019587 | None:intergenic | 40.0% | |
| AACGTTTATCAATTTCGGGG+GGG | + | chr7_1:58019697-58019716 | None:intergenic | 40.0% | |
| ATTTCAGGGGGATATTTGCA+AGG | + | chr7_1:58019963-58019982 | None:intergenic | 40.0% | |
| CAGATCACCTATTAGGATTC+TGG | - | chr7_1:58020206-58020225 | Msa1026300:CDS | 40.0% | |
| ATCACCTATTAGGATTCTGG+AGG | - | chr7_1:58020209-58020228 | Msa1026300:CDS | 40.0% | |
| TGCAGAGTAAACGTTGTGAT+TGG | + | chr7_1:58020235-58020254 | None:intergenic | 40.0% | |
| CGTTTACTCTGCAATCATTG+GGG | - | chr7_1:58020242-58020261 | Msa1026300:CDS | 40.0% | |
| GTGTGCATGAAGATTGAAGA+TGG | - | chr7_1:58020270-58020289 | Msa1026300:CDS | 40.0% | |
| CAGACATGATGCCTAATGCT+TGG | - | chr7_1:58015518-58015537 | Msa1026300:CDS | 45.0% | |
| GATTCTGCAGAGCTATCAAG+TGG | + | chr7_1:58015820-58015839 | None:intergenic | 45.0% | |
| !! | CTGTTCTGATTTCTGGCTCA+GGG | + | chr7_1:58015852-58015871 | None:intergenic | 45.0% |
| !! | TCTGTTCTGATTTCTGGCTC+AGG | + | chr7_1:58015853-58015872 | None:intergenic | 45.0% |
| ACACGGTCTGTTCTGATTTC+TGG | + | chr7_1:58015859-58015878 | None:intergenic | 45.0% | |
| !! | TCTGGTTTGGTCACAATTGG+TGG | + | chr7_1:58015994-58016013 | None:intergenic | 45.0% |
| GTTCACCAGGTGTGAAACTT+AGG | - | chr7_1:58016181-58016200 | Msa1026300:intron | 45.0% | |
| ! | TGGTGGAAGACGTACTTTTC+CGG | + | chr7_1:58016251-58016270 | None:intergenic | 45.0% |
| TACGTCTTCCACCATCGTTT+CGG | - | chr7_1:58016257-58016276 | Msa1026300:intron | 45.0% | |
| GTCGATCTTGAGCGAAATAC+AGG | + | chr7_1:58016536-58016555 | None:intergenic | 45.0% | |
| TGTTTGATCGCAATAGGGGT+CGG | - | chr7_1:58017567-58017586 | Msa1026300:intron | 45.0% | |
| !! | ACTACCATGGCTTTGATCCA+TGG | - | chr7_1:58017704-58017723 | Msa1026300:intron | 45.0% |
| !! | CTACCATGGCTTTGATCCAT+GGG | - | chr7_1:58017705-58017724 | Msa1026300:intron | 45.0% |
| TTTCCCATGGATCAAAGCCA+TGG | + | chr7_1:58017711-58017730 | None:intergenic | 45.0% | |
| !!! | TACCCTTTTTCAGTCCCTCA+TGG | - | chr7_1:58018131-58018150 | Msa1026300:intron | 45.0% |
| GTCCATGAGGGACTGAAAAA+GGG | + | chr7_1:58018136-58018155 | None:intergenic | 45.0% | |
| AAAAGCTGCATGCTCTGACA+AGG | + | chr7_1:58018874-58018893 | None:intergenic | 45.0% | |
| ! | TGTCAGAGCATGCAGCTTTT+AGG | - | chr7_1:58018874-58018893 | Msa1026300:intron | 45.0% |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr7_1:58019068-58019087 | Msa1026300:intron | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr7_1:58019069-58019088 | Msa1026300:intron | 45.0% | |
| GTTCTTATAGGGGGAGGTTA+GGG | + | chr7_1:58019330-58019349 | None:intergenic | 45.0% | |
| TTCAAGGTTCTTATAGGGGG+AGG | + | chr7_1:58019336-58019355 | None:intergenic | 45.0% | |
| GCGTCTCTCTGGTTAAAGTT+TGG | + | chr7_1:58019500-58019519 | None:intergenic | 45.0% | |
| AACTTTAACCAGAGAGACGC+AGG | - | chr7_1:58019500-58019519 | Msa1026300:CDS | 45.0% | |
| CTATTTAACCCACTCTTGGG+AGG | + | chr7_1:58019569-58019588 | None:intergenic | 45.0% | |
| ATTGACGCGCCTTGCAATTT+CGG | + | chr7_1:58019643-58019662 | None:intergenic | 45.0% | |
| ATGGAGGAAATTAACGGAGG+GGG | + | chr7_1:58019730-58019749 | None:intergenic | 45.0% | |
| GATGGAGGAAATTAACGGAG+GGG | + | chr7_1:58019731-58019750 | None:intergenic | 45.0% | |
| GGATGGAGGAAATTAACGGA+GGG | + | chr7_1:58019732-58019751 | None:intergenic | 45.0% | |
| TGGATGGAGGAAATTAACGG+AGG | + | chr7_1:58019733-58019752 | None:intergenic | 45.0% | |
| TAACTGCCACATCAGCATGT+TGG | + | chr7_1:58019753-58019772 | None:intergenic | 45.0% | |
| ATCAACATTTGTGCCACCCA+CGG | - | chr7_1:58019936-58019955 | Msa1026300:CDS | 45.0% | |
| TTGGCCTCCAGAATCCTAAT+AGG | + | chr7_1:58020216-58020235 | None:intergenic | 45.0% | |
| ATGGTTCATGGAGCCCAATT+GGG | - | chr7_1:58020289-58020308 | Msa1026300:CDS | 45.0% | |
| GGGAATGGACACTCAAAAAG+TGG | - | chr7_1:58020313-58020332 | Msa1026300:CDS | 45.0% | |
| !! | ATAATAAATATAACTTTAAA+TGG | + | chr7_1:58018244-58018263 | None:intergenic | 5.0% |
| !!! | AAAGTTATATTTATTATTTT+AGG | - | chr7_1:58018247-58018266 | Msa1026300:intron | 5.0% |
| !!! | AAAAAGTTAAATATATTTTT+TGG | + | chr7_1:58018551-58018570 | None:intergenic | 5.0% |
| !!! | ATATAAGTTATAAATTTTAT+GGG | + | chr7_1:58020071-58020090 | None:intergenic | 5.0% |
| CGTTCGTCGGAAGAAGAACA+CGG | + | chr7_1:58015876-58015895 | None:intergenic | 50.0% | |
| TCAATCTGACCGTCCACTAG+TGG | - | chr7_1:58016569-58016588 | Msa1026300:intron | 50.0% | |
| CAATCTGACCGTCCACTAGT+GGG | - | chr7_1:58016570-58016589 | Msa1026300:intron | 50.0% | |
| AATCTGACCGTCCACTAGTG+GGG | - | chr7_1:58016571-58016590 | Msa1026300:intron | 50.0% | |
| AATGTGACCCCACTAGTGGA+CGG | + | chr7_1:58016581-58016600 | None:intergenic | 50.0% | |
| TGGCTAGACTCAAACCCCAT+TGG | + | chr7_1:58017419-58017438 | None:intergenic | 50.0% | |
| GTTTGATCGCAATAGGGGTC+GGG | - | chr7_1:58017568-58017587 | Msa1026300:intron | 50.0% | |
| ! | GGGGTCGGGATTTTTACTGT+AGG | - | chr7_1:58017582-58017601 | Msa1026300:intron | 50.0% |
| TGTCACTGACATACTCCCTC+CGG | - | chr7_1:58017807-58017826 | Msa1026300:intron | 50.0% | |
| GGTCCATGAGGGACTGAAAA+AGG | + | chr7_1:58018137-58018156 | None:intergenic | 50.0% | |
| CAACCTCTTTGGGTCCATGA+GGG | + | chr7_1:58018148-58018167 | None:intergenic | 50.0% | |
| GGTTCTTATAGGGGGAGGTT+AGG | + | chr7_1:58019331-58019350 | None:intergenic | 50.0% | |
| !! | TGCAATTTCGGGGGGGTATT+TGG | + | chr7_1:58019631-58019650 | None:intergenic | 50.0% |
| AATACCCCCCCGAAATTGCA+AGG | - | chr7_1:58019631-58019650 | Msa1026300:CDS | 50.0% | |
| TTGACGCGCCTTGCAATTTC+GGG | + | chr7_1:58019642-58019661 | None:intergenic | 50.0% | |
| TGGAGGAAATTAACGGAGGG+GGG | + | chr7_1:58019729-58019748 | None:intergenic | 50.0% | |
| CACATCAGCATGTTGGATGG+AGG | + | chr7_1:58019746-58019765 | None:intergenic | 50.0% | |
| CTCCATCCAACATGCTGATG+TGG | - | chr7_1:58019744-58019763 | Msa1026300:CDS | 50.0% | |
| TGCCACATCAGCATGTTGGA+TGG | + | chr7_1:58019749-58019768 | None:intergenic | 50.0% | |
| CACTGCCACATGGTCAGAAA+AGG | - | chr7_1:58019786-58019805 | Msa1026300:CDS | 50.0% | |
| ! | GCATGCCTTTTCTGACCATG+TGG | + | chr7_1:58019794-58019813 | None:intergenic | 50.0% |
| ! | AAAAGGCATGCCACGTCAGA+GGG | - | chr7_1:58019803-58019822 | Msa1026300:CDS | 50.0% |
| ATATTTGCAAGGTCCGTGGG+TGG | + | chr7_1:58019952-58019971 | None:intergenic | 50.0% | |
| GGGATATTTGCAAGGTCCGT+GGG | + | chr7_1:58019955-58019974 | None:intergenic | 50.0% | |
| GATGGTTCATGGAGCCCAAT+TGG | - | chr7_1:58020288-58020307 | Msa1026300:CDS | 50.0% | |
| TTCATGGAGCCCAATTGGGA+GGG | - | chr7_1:58020293-58020312 | Msa1026300:CDS | 50.0% | |
| GTGTCCATTCCCTCCCAATT+GGG | + | chr7_1:58020305-58020324 | None:intergenic | 50.0% | |
| AGTGTCCATTCCCTCCCAAT+TGG | + | chr7_1:58020306-58020325 | None:intergenic | 50.0% | |
| TCTTCCACCATCGTTTCGGC+TGG | - | chr7_1:58016261-58016280 | Msa1026300:intron | 55.0% | |
| AGTCCCTCATGGACCCAAAG+AGG | - | chr7_1:58018142-58018161 | Msa1026300:intron | 55.0% | |
| GCAACCTCTTTGGGTCCATG+AGG | + | chr7_1:58018149-58018168 | None:intergenic | 55.0% | |
| TAAGCAAGCCTGCGTCTCTC+TGG | + | chr7_1:58019511-58019530 | None:intergenic | 55.0% | |
| TTACATGGCCCTCCCAAGAG+TGG | - | chr7_1:58019557-58019576 | Msa1026300:CDS | 55.0% | |
| TACATGGCCCTCCCAAGAGT+GGG | - | chr7_1:58019558-58019577 | Msa1026300:CDS | 55.0% | |
| TGACGCGCCTTGCAATTTCG+GGG | + | chr7_1:58019641-58019660 | None:intergenic | 55.0% | |
| ! | GAAAAGGCATGCCACGTCAG+AGG | - | chr7_1:58019802-58019821 | Msa1026300:CDS | 55.0% |
| ! | AAAGGCATGCCACGTCAGAG+GGG | - | chr7_1:58019804-58019823 | Msa1026300:CDS | 55.0% |
| TCAATTACCCCCCTCTGACG+TGG | + | chr7_1:58019816-58019835 | None:intergenic | 55.0% | |
| GGGGATATTTGCAAGGTCCG+TGG | + | chr7_1:58019956-58019975 | None:intergenic | 55.0% | |
| GTTCATGGAGCCCAATTGGG+AGG | - | chr7_1:58020292-58020311 | Msa1026300:CDS | 55.0% | |
| GTTGCCAGCCGAAACGATGG+TGG | + | chr7_1:58016268-58016287 | None:intergenic | 60.0% | |
| CCATCGTTTCGGCTGGCAAC+CGG | - | chr7_1:58016268-58016287 | Msa1026300:intron | 60.0% | |
| ACGCGCCTTGCAATTTCGGG+GGG | + | chr7_1:58019639-58019658 | None:intergenic | 60.0% | |
| GACGCGCCTTGCAATTTCGG+GGG | + | chr7_1:58019640-58019659 | None:intergenic | 60.0% | |
| GTGGCAGTTAACTGCCCACG+TGG | - | chr7_1:58019763-58019782 | Msa1026300:CDS | 60.0% | |
| ACCATGTGGCAGTGCCACGT+GGG | + | chr7_1:58019780-58019799 | None:intergenic | 60.0% | |
| AAGGCATGCCACGTCAGAGG+GGG | - | chr7_1:58019805-58019824 | Msa1026300:CDS | 60.0% | |
| GGAGCCCAATTGGGAGGGAA+TGG | - | chr7_1:58020298-58020317 | Msa1026300:CDS | 60.0% | |
| CCGGTTGCCAGCCGAAACGA+TGG | + | chr7_1:58016271-58016290 | None:intergenic | 65.0% | |
| CGCGCCTTGCAATTTCGGGG+GGG | + | chr7_1:58019638-58019657 | None:intergenic | 65.0% | |
| GACCATGTGGCAGTGCCACG+TGG | + | chr7_1:58019781-58019800 | None:intergenic | 65.0% | |
| AGGCATGCCACGTCAGAGGG+GGG | - | chr7_1:58019806-58019825 | Msa1026300:CDS | 65.0% | |
| GCCCACGTGGCACTGCCACA+TGG | - | chr7_1:58019776-58019795 | Msa1026300:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 58015493 | 58020341 | 58015493 | ID=Msa1026300;Name=Msa1026300 |
| chr7_1 | mRNA | 58015493 | 58020341 | 58015493 | ID=Msa1026300-mRNA-1;Parent=Msa1026300;Name=Msa1026300-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|358 |
| chr7_1 | exon | 58019386 | 58020341 | 58019386 | ID=Msa1026300-mRNA-1:exon:11613;Parent=Msa1026300-mRNA-1 |
| chr7_1 | exon | 58015493 | 58015613 | 58015493 | ID=Msa1026300-mRNA-1:exon:11612;Parent=Msa1026300-mRNA-1 |
| chr7_1 | CDS | 58019386 | 58020341 | 58019386 | ID=Msa1026300-mRNA-1:cds;Parent=Msa1026300-mRNA-1 |
| chr7_1 | CDS | 58015493 | 58015613 | 58015493 | ID=Msa1026300-mRNA-1:cds;Parent=Msa1026300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
