AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027050 MtrunA17_Chr7g0245591 99.526 422 2 0 1 422 1 422 0.0 870
Msa1027050 MtrunA17_Chr8g0389111 67.120 368 107 3 55 422 65 418 0.0 517
Msa1027050 MtrunA17_Chr2g0297021 40.000 145 79 3 50 190 11 151 3.93e-28 112
Msa1027050 MtrunA17_Chr2g0297021 32.051 156 101 3 258 411 18 170 4.49e-17 81.3
Msa1027050 MtrunA17_Chr3g0120311 39.437 142 78 3 53 190 16 153 6.74e-26 106
Msa1027050 MtrunA17_Chr3g0120311 32.927 164 103 4 251 410 11 171 2.48e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027050 AT2G38670.1 84.987 373 55 1 50 422 50 421 0.0 667
Msa1027050 AT2G32260.1 39.161 143 78 3 53 190 33 171 1.56e-27 112
Msa1027050 AT2G32260.1 34.969 163 99 4 250 408 28 187 3.80e-18 85.5
Msa1027050 AT2G32260.2 39.450 109 60 2 84 190 18 122 3.64e-18 84.7
Msa1027050 AT2G32260.2 32.800 125 81 2 284 408 17 138 1.56e-11 65.1

Find 136 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAGGACTATCTAAAATT+TGG 0.214901 7_1:-59282497 None:intergenic
AAAACCGATTCGTGTTTATA+TGG 0.236649 7_1:+59276851 Msa1027050:CDS
TGATGAAATTATTGCTAATA+AGG 0.259012 7_1:+59276968 Msa1027050:CDS
TATTCATCTTCTGGGCCATT+TGG 0.267914 7_1:+59276795 Msa1027050:CDS
AATTGAACCTTTCATGTAAA+GGG 0.279295 7_1:-59277004 None:intergenic
AACATCTCATTAGTTGTTCA+TGG 0.281650 7_1:+59282285 Msa1027050:CDS
TCATCGGTGAATGAACAAAA+TGG 0.285598 7_1:+59276686 Msa1027050:exon
ATAGATAAGATAGATAAATA+AGG 0.329188 7_1:-59284636 None:intergenic
TAACAACTACTACAATAATT+AGG 0.336813 7_1:+59282523 Msa1027050:CDS
TGCTTATGCTCATGCCAAAA+AGG 0.344791 7_1:+59278085 Msa1027050:CDS
CTTCTGGGCCATTTGGGTTG+TGG 0.345993 7_1:+59276802 Msa1027050:CDS
GTAATGGCATATGGAGCTTC+AGG 0.353572 7_1:-59277972 None:intergenic
ATCGTTGGTGTATCAGTATT+AGG 0.355171 7_1:+59276768 Msa1027050:CDS
TTGGAAGATGCCCAAGCTAA+TGG 0.360375 7_1:-59282478 None:intergenic
ATTCATCTTCTGGGCCATTT+GGG 0.367495 7_1:+59276796 Msa1027050:CDS
ACTGATTCATGTCTGTCATT+TGG 0.368297 7_1:+59284571 Msa1027050:exon
AAGCTAATGGGAACGGCATA+TGG 0.372204 7_1:-59282465 None:intergenic
CTTTCATGTAAAGGGGTAAC+AGG 0.373536 7_1:-59276996 None:intergenic
AATGGGGAGGAATAAGAAAA+AGG 0.380455 7_1:-59276572 None:intergenic
AATATAGATTACATTATTCA+TGG 0.380755 7_1:+59278029 Msa1027050:CDS
CTTGGTGATCAATTGATTGT+TGG 0.388238 7_1:+59276933 Msa1027050:CDS
GTGAAAAGAAGCAAAATATT+CGG 0.391402 7_1:-59276634 None:intergenic
TATAGATCCTGAGGCTTGCC+AGG 0.404602 7_1:+59281041 Msa1027050:intron
TTGGCTTTGCAGTGCAACTA+GGG 0.405701 7_1:+59281666 Msa1027050:intron
GTAGTAGTTGTTATATCTAA+AGG 0.412707 7_1:-59282513 None:intergenic
AAATTGAACCTTTCATGTAA+AGG 0.427115 7_1:-59277005 None:intergenic
ATGGGAAGTGTCCAAGGATA+TGG 0.427824 7_1:+59281777 Msa1027050:CDS
TTGCGTCAAGCTCGTGCTCT+TGG 0.428384 7_1:+59276915 Msa1027050:CDS
CATCGGTGAATGAACAAAAT+GGG 0.428841 7_1:+59276687 Msa1027050:exon
GAGAGCAAGACTCACGTGTC+TGG 0.432624 7_1:+59284546 Msa1027050:CDS
GCACGGATTGTATATATAGA+TGG 0.433231 7_1:+59279896 Msa1027050:CDS
TTTGGCTTTGCAGTGCAACT+AGG 0.439120 7_1:+59281665 Msa1027050:intron
TGGAAGATGCCCAAGCTAAT+GGG 0.439923 7_1:-59282477 None:intergenic
AATTGAATTGAATTGATGAA+TGG 0.442664 7_1:-59276590 None:intergenic
ACGTTTGCAACCTGACTGTC+TGG 0.445139 7_1:-59281102 None:intergenic
CATTTGGAGACATAAACATT+GGG 0.446540 7_1:+59284587 Msa1027050:three_prime_UTR
TTCAGCCATGAGCACGAGTT+AGG 0.448347 7_1:+59284711 Msa1027050:three_prime_UTR
ATATATACAATCCGTGCATC+AGG 0.448842 7_1:-59279890 None:intergenic
CACGATCCCTGGCAAGCCTC+AGG 0.449144 7_1:-59281048 None:intergenic
CCGATTCGTGTTTATATGGA+TGG 0.449331 7_1:+59276855 Msa1027050:CDS
AAGAAAATCTCCACGATCCC+TGG 0.449604 7_1:-59281059 None:intergenic
TGCTTGCTGTTCCAGAGTCC+AGG 0.450621 7_1:+59279866 Msa1027050:intron
AATTCCTCAGTAATGGCATA+TGG 0.452121 7_1:-59277981 None:intergenic
CTTCATGAATTCCTCAGTAA+TGG 0.452344 7_1:-59277988 None:intergenic
GATGAAATTATTGCTAATAA+GGG 0.453969 7_1:+59276969 Msa1027050:CDS
TCAACAATAATAACCTGAAA+AGG 0.456418 7_1:+59276527 Msa1027050:five_prime_UTR
TATGTGGATGAGGTTATAAT+TGG 0.457136 7_1:+59281748 Msa1027050:CDS
AGAATTGTTCAGTTCTCAAA+CGG 0.463855 7_1:+59278533 Msa1027050:CDS
TTATGGTGAATGCTGTGAAA+TGG 0.466073 7_1:+59277934 Msa1027050:CDS
CACTTAGACTTCTTTCATGA+AGG 0.468250 7_1:-59281711 None:intergenic
ATTGAATTGAATTGATGAAT+GGG 0.473853 7_1:-59276589 None:intergenic
TATGCCGTTCCCATTAGCTT+GGG 0.479975 7_1:+59282468 Msa1027050:CDS
CTGTTACCCCTTTACATGAA+AGG 0.486145 7_1:+59276997 Msa1027050:CDS
ACAATCCGTGCATCAGGTCC+TGG 0.490558 7_1:-59279884 None:intergenic
GTTTCCAGCACTGATATTGT+TGG 0.491631 7_1:+59278143 Msa1027050:CDS
AACAACGATGTCTGTATCAA+TGG 0.491664 7_1:+59276481 Msa1027050:five_prime_UTR
TATGGTGAATGCTGTGAAAT+GGG 0.494368 7_1:+59277935 Msa1027050:CDS
TGCGCTTTATCTGTTTATAA+CGG 0.494682 7_1:-59278112 None:intergenic
AATTAGACTGACCATATCCT+TGG 0.497284 7_1:-59281788 None:intergenic
GCAGAAACGCAATGAGAAGA+AGG 0.498107 7_1:+59284500 Msa1027050:intron
TACACACGGACCAGACAGTC+AGG 0.503363 7_1:+59281092 Msa1027050:CDS
TCTTTCATGAAGGCTCATGA+TGG 0.505520 7_1:-59281701 None:intergenic
ATATAGATTACATTATTCAT+GGG 0.507921 7_1:+59278030 Msa1027050:CDS
CCATCCATATAAACACGAAT+CGG 0.508010 7_1:-59276855 None:intergenic
TGCTTCTCTGTGTAAGAGAA+AGG 0.508525 7_1:+59278378 Msa1027050:CDS
TGTGTGTGACAGGTTGATTA+TGG 0.508667 7_1:+59277917 Msa1027050:intron
AAGACAGTTCAGCAATGGCC+GGG 0.509013 7_1:+59278436 Msa1027050:CDS
GAATTGTTCAGTTCTCAAAC+GGG 0.509341 7_1:+59278534 Msa1027050:CDS
ATATGCCGTTCCCATTAGCT+TGG 0.515291 7_1:+59282467 Msa1027050:CDS
TCATTTGGAGACATAAACAT+TGG 0.515865 7_1:+59284586 Msa1027050:three_prime_UTR
ATCAAATCACGAGGCATACC+AGG 0.519393 7_1:+59282554 Msa1027050:CDS
CTTTCATGAAGGCTCATGAT+GGG 0.522971 7_1:-59281700 None:intergenic
AAAGACAGTTCAGCAATGGC+CGG 0.523971 7_1:+59278435 Msa1027050:CDS
CTGACCAACAATATCAGTGC+TGG 0.528820 7_1:-59278147 None:intergenic
GCATAAGCATCAGTTCCATC+AGG 0.530923 7_1:-59278071 None:intergenic
ACGTTTATTCCCTTCGAATG+AGG 0.532059 7_1:+59276655 Msa1027050:five_prime_UTR
ATAAGGAGTGTGTGAAATCC+TGG 0.533627 7_1:-59284619 None:intergenic
CTGAGGCTTGCCAGGGATCG+TGG 0.539877 7_1:+59281049 Msa1027050:CDS
TTTAATAAATTATAAATCAG+AGG 0.548322 7_1:-59284748 None:intergenic
CATACGATGGGCTGCCTGTG+TGG 0.550562 7_1:+59276446 None:intergenic
TGAACAATTCTACGAGATGT+AGG 0.551872 7_1:-59278521 None:intergenic
GGTTATAATTGGTGCACCAT+GGG 0.552103 7_1:+59281759 Msa1027050:CDS
AATCTAATGCGGCGGTGAAG+TGG 0.557630 7_1:+59276730 Msa1027050:CDS
GTGGTCGGAGTTATCATCGT+TGG 0.560954 7_1:+59276753 Msa1027050:CDS
CGAGGCCTAACTCGTGCTCA+TGG 0.561628 7_1:-59284716 None:intergenic
GCGGCGGTGAAGTGGGTGGT+CGG 0.566706 7_1:+59276738 Msa1027050:CDS
ATCTAATGCGGCGGTGAAGT+GGG 0.571718 7_1:+59276731 Msa1027050:CDS
ATCGGTGAATGAACAAAATG+GGG 0.578092 7_1:+59276688 Msa1027050:exon
TGCACCATGGGAAGTGTCCA+AGG 0.578093 7_1:+59281771 Msa1027050:CDS
TGCTGTGAAATGGGTTGATG+AGG 0.579715 7_1:+59277944 Msa1027050:CDS
AGGTTATAATTGGTGCACCA+TGG 0.581761 7_1:+59281758 Msa1027050:CDS
TTACAAAGACAGTTCAGCAA+TGG 0.583914 7_1:+59278431 Msa1027050:CDS
TGGCTTTGCAGTGCAACTAG+GGG 0.586130 7_1:+59281667 Msa1027050:intron
GATCCTTGTGTTCTACCTGA+TGG 0.587679 7_1:+59278056 Msa1027050:CDS
ATTGAACCTTTCATGTAAAG+GGG 0.588992 7_1:-59277003 None:intergenic
GACGGTGGTGTTGTTGCTAG+TGG 0.591924 7_1:+59278476 Msa1027050:CDS
GATGCCCAAGCTAATGGGAA+CGG 0.592555 7_1:-59282472 None:intergenic
CTTTCATGCTGGACATGTAG+AGG 0.593297 7_1:+59279931 Msa1027050:CDS
AGACAGTTCAGCAATGGCCG+GGG 0.593488 7_1:+59278437 Msa1027050:CDS
AAACAGATAAAGCGCACGGA+AGG 0.598970 7_1:+59278119 Msa1027050:CDS
CAGAAACGCAATGAGAAGAA+GGG 0.603423 7_1:+59284501 Msa1027050:intron
AGAAGAATGATTATGAGTGT+CGG 0.605267 7_1:-59278408 None:intergenic
TTGAATTGAATTGATGAATG+GGG 0.607933 7_1:-59276588 None:intergenic
TTGTTCAGTTCTCAAACGGG+AGG 0.609678 7_1:+59278537 Msa1027050:CDS
CAACTACTACAATAATTAGG+AGG 0.612150 7_1:+59282526 Msa1027050:CDS
ATATCCTTGGACACTTCCCA+TGG 0.613148 7_1:-59281775 None:intergenic
TATAGATTACATTATTCATG+GGG 0.619764 7_1:+59278031 Msa1027050:CDS
ATTTGGAGACATAAACATTG+GGG 0.620339 7_1:+59284588 Msa1027050:three_prime_UTR
AGCATGTCGCTATGTGGATG+AGG 0.623388 7_1:+59281738 Msa1027050:CDS
ATAGATCCTGAGGCTTGCCA+GGG 0.626208 7_1:+59281042 Msa1027050:intron
TCTTCTTGTTGGAATACACA+CGG 0.626308 7_1:+59281078 Msa1027050:CDS
AGAGTCCAGGACCTGATGCA+CGG 0.628567 7_1:+59279879 Msa1027050:intron
TGTGCTAGCATGTCGCTATG+TGG 0.639131 7_1:+59281732 Msa1027050:CDS
TTGGAGACATAAACATTGGG+GGG 0.641280 7_1:+59284590 Msa1027050:three_prime_UTR
CTTCAAACTTCTGCTGACCC+CGG 0.641941 7_1:-59278454 None:intergenic
GTTCCATCAGGTAGAACACA+AGG 0.643125 7_1:-59278059 None:intergenic
TGTTCAGTTCTCAAACGGGA+GGG 0.645197 7_1:+59278538 Msa1027050:CDS
AATTGAATTGATGAATGGGG+AGG 0.650249 7_1:-59276585 None:intergenic
GGTCAGCAGAAGTTTGAAGA+CGG 0.660781 7_1:+59278458 Msa1027050:CDS
CAGTGTTGAATCTAATGCGG+CGG 0.663209 7_1:+59276722 Msa1027050:CDS
GAATGAGGAAGAAAACTCAT+CGG 0.665554 7_1:+59276670 Msa1027050:five_prime_UTR
AGGCAGAAAATGAGATACAC+GGG 0.667471 7_1:-59278501 None:intergenic
TAGGCAGAAAATGAGATACA+CGG 0.668725 7_1:-59278502 None:intergenic
TAATGCGGCGGTGAAGTGGG+TGG 0.671113 7_1:+59276734 Msa1027050:CDS
TTATAAACAGATAAAGCGCA+CGG 0.674873 7_1:+59278115 Msa1027050:CDS
TTTGGAGACATAAACATTGG+GGG 0.675348 7_1:+59284589 Msa1027050:three_prime_UTR
CAGCAGAAGTTTGAAGACGG+TGG 0.675930 7_1:+59278461 Msa1027050:CDS
TGAGCACGAGTTAGGCCTCG+TGG 0.677216 7_1:+59284719 Msa1027050:three_prime_UTR
CGGTGAATGAACAAAATGGG+GGG 0.680827 7_1:+59276690 Msa1027050:exon
TCATGTAAAGGGGTAACAGG+AGG 0.682525 7_1:-59276993 None:intergenic
TCGGTGAATGAACAAAATGG+GGG 0.684672 7_1:+59276689 Msa1027050:exon
TAGCAGTGTTGAATCTAATG+CGG 0.691391 7_1:+59276719 Msa1027050:CDS
AGCTCCATATGCCATTACTG+AGG 0.698360 7_1:+59277977 Msa1027050:CDS
GAGGATTGTATCAAATCACG+AGG 0.725632 7_1:+59282545 Msa1027050:CDS
TTGAGACATACAGACCACAC+AGG 0.735120 7_1:-59276460 None:intergenic
AGGAGTGTGTGAAATCCTGG+TGG 0.795352 7_1:-59284616 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGAACAAAAATATATTTTT+AGG - chr7_1:59280037-59280056 None:intergenic 10.0%
!! ATATTATATTTCAACATAAA+AGG - chr7_1:59281150-59281169 None:intergenic 10.0%
!! AATATTAATAATTAAAGCAA+AGG + chr7_1:59281910-59281929 Msa1027050:intron 10.0%
!! ATTCTAATTCTAATAAAAAT+AGG + chr7_1:59282875-59282894 Msa1027050:intron 10.0%
!!! CATAAAGATTTTAATTTAAA+TGG + chr7_1:59283129-59283148 Msa1027050:intron 10.0%
!!! ATGCTAATATATATTATTTT+TGG + chr7_1:59283501-59283520 Msa1027050:intron 10.0%
!!! ATATATATTATTTTTGGATT+TGG + chr7_1:59283507-59283526 Msa1027050:intron 10.0%
!! TTTAATAAATTATAAATCAG+AGG - chr7_1:59284751-59284770 None:intergenic 10.0%
!! AAAAAACAATAATACTAATA+CGG - chr7_1:59284919-59284938 None:intergenic 10.0%
!!! ATTTTTTTTATTTCCTTTTC+AGG - chr7_1:59276543-59276562 None:intergenic 15.0%
!!! TATTTTTAATTTACCATTTC+TGG + chr7_1:59277055-59277074 Msa1027050:intron 15.0%
!! TTGTTTAAATGAATTTATGA+TGG + chr7_1:59277180-59277199 Msa1027050:intron 15.0%
!! AATATAGATTACATTATTCA+TGG + chr7_1:59278029-59278048 Msa1027050:CDS 15.0%
!! ATATAGATTACATTATTCAT+GGG + chr7_1:59278030-59278049 Msa1027050:CDS 15.0%
!!! TTACGTTTATTTTTTTTAAC+AGG + chr7_1:59278893-59278912 Msa1027050:intron 15.0%
!! AAATACACATAATTCTAATT+TGG - chr7_1:59279811-59279830 None:intergenic 15.0%
!!! ATATATTTTTAGGTAATGAT+CGG - chr7_1:59280027-59280046 None:intergenic 15.0%
!! GAAATATAATATATTGTACT+TGG + chr7_1:59281158-59281177 Msa1027050:intron 15.0%
!!! TTTTTATTTTACATTAGAGT+TGG - chr7_1:59281358-59281377 None:intergenic 15.0%
!!! TTATTTGTTATGATATGTAA+TGG + chr7_1:59281886-59281905 Msa1027050:intron 15.0%
!! TAAAATAAAAACAAAACAGT+AGG - chr7_1:59284055-59284074 None:intergenic 15.0%
!! ATAGATAAGATAGATAAATA+AGG - chr7_1:59284639-59284658 None:intergenic 15.0%
!!! GTTTTTTATATTTTTGTTTG+TGG + chr7_1:59284671-59284690 Msa1027050:three_prime_UTR 15.0%
!! TAAAAACTTACATATTCATA+AGG - chr7_1:59284784-59284803 None:intergenic 15.0%
!!! TTTTTATCAGATAAAAATTG+TGG + chr7_1:59284798-59284817 Msa1027050:three_prime_UTR 15.0%
!! AGAGTGAAAAAAAATAGAAA+TGG - chr7_1:59276508-59276527 None:intergenic 20.0%
!! ATTGAATTGAATTGATGAAT+GGG - chr7_1:59276592-59276611 None:intergenic 20.0%
!! AATTGAATTGAATTGATGAA+TGG - chr7_1:59276593-59276612 None:intergenic 20.0%
!! TGATGAAATTATTGCTAATA+AGG + chr7_1:59276968-59276987 Msa1027050:CDS 20.0%
!! GATGAAATTATTGCTAATAA+GGG + chr7_1:59276969-59276988 Msa1027050:CDS 20.0%
!! TTAAATTGATTGTACTTACA+TGG + chr7_1:59277145-59277164 Msa1027050:intron 20.0%
!!! AACTTATTTTATTCTAGTGT+TGG - chr7_1:59277363-59277382 None:intergenic 20.0%
!! CTAGAATAAAATAAGTTTAG+CGG + chr7_1:59277366-59277385 Msa1027050:intron 20.0%
!!! TCTTTCTTAATAGTTTTTCT+AGG - chr7_1:59277602-59277621 None:intergenic 20.0%
!! TTCTTTCATAAACCATATTT+AGG - chr7_1:59277646-59277665 None:intergenic 20.0%
!!! TTTATTTTGTGATTTTGATG+TGG + chr7_1:59277844-59277863 Msa1027050:intron 20.0%
!!! GTTATTTTGATTTGTTTGTT+TGG + chr7_1:59277866-59277885 Msa1027050:intron 20.0%
!!! TTTTTCTGAGATTTTGATTA+TGG + chr7_1:59277891-59277910 Msa1027050:intron 20.0%
!! TATAGATTACATTATTCATG+GGG + chr7_1:59278031-59278050 Msa1027050:CDS 20.0%
!! TTTCATAAATTATTGCATAG+AGG + chr7_1:59278272-59278291 Msa1027050:intron 20.0%
!!! TTTATGAACTTGTTATTTAC+AGG + chr7_1:59278805-59278824 Msa1027050:intron 20.0%
!!! TTATGAACTTGTTATTTACA+GGG + chr7_1:59278806-59278825 Msa1027050:intron 20.0%
!!! CTAAATTTTTCTATTTCCTA+AGG - chr7_1:59278872-59278891 None:intergenic 20.0%
!!! CAATAGAAAATAAAGTGTTT+TGG + chr7_1:59280224-59280243 Msa1027050:intron 20.0%
!!! TGATCATTTTAATTCAAACA+CGG + chr7_1:59280451-59280470 Msa1027050:intron 20.0%
!!! ATAAATAATTGGGTCTTATT+TGG - chr7_1:59280807-59280826 None:intergenic 20.0%
!!! TAGAATAATTTGGAACTAAA+GGG - chr7_1:59280864-59280883 None:intergenic 20.0%
!!! ATAGAATAATTTGGAACTAA+AGG - chr7_1:59280865-59280884 None:intergenic 20.0%
!!! TTTTTCCTCATAGAATAATT+TGG - chr7_1:59280874-59280893 None:intergenic 20.0%
!!! AGAGTTTCTTTTAAAAGAAA+AGG - chr7_1:59280901-59280920 None:intergenic 20.0%
!! GTACAATAAGGAAAAATAAA+AGG - chr7_1:59280931-59280950 None:intergenic 20.0%
!! TATATTTCAACATAAAAGGT+AGG - chr7_1:59281146-59281165 None:intergenic 20.0%
!! AAGTTTGATATGGTAAAAAA+TGG - chr7_1:59281322-59281341 None:intergenic 20.0%
!!! TGACAATGTTCTATTTTTTT+TGG + chr7_1:59281647-59281666 Msa1027050:intron 20.0%
!! AATAATCTATCCAACTATTT+GGG - chr7_1:59282066-59282085 None:intergenic 20.0%
!! AAATTGTCACAAAATCTTAT+TGG - chr7_1:59282132-59282151 None:intergenic 20.0%
!! AATGTCAATAACAACTAATA+AGG - chr7_1:59282420-59282439 None:intergenic 20.0%
!! TAACAACTACTACAATAATT+AGG + chr7_1:59282523-59282542 Msa1027050:CDS 20.0%
!! AAATAGACATGTATTTCATA+CGG + chr7_1:59282804-59282823 Msa1027050:intron 20.0%
!! TCAATTAAAAAAAGAAGAAG+CGG - chr7_1:59282969-59282988 None:intergenic 20.0%
!! TAATACAGTTTAGTTAACTA+CGG + chr7_1:59283266-59283285 Msa1027050:intron 20.0%
!! TATGAAGTCTTCATATTAAA+TGG + chr7_1:59283819-59283838 Msa1027050:intron 20.0%
!!! GTTTGACAGTTTTTAAATAA+AGG + chr7_1:59284150-59284169 Msa1027050:intron 20.0%
!!! AGATTCTTTTAAGAGAAAAT+GGG - chr7_1:59284240-59284259 None:intergenic 20.0%
!!! AAGATTCTTTTAAGAGAAAA+TGG - chr7_1:59284241-59284260 None:intergenic 20.0%
! TCAACAATAATAACCTGAAA+AGG + chr7_1:59276527-59276546 Msa1027050:five_prime_UTR 25.0%
! TTGAATTGAATTGATGAATG+GGG - chr7_1:59276591-59276610 None:intergenic 25.0%
! GTGAAAAGAAGCAAAATATT+CGG - chr7_1:59276637-59276656 None:intergenic 25.0%
!! TTAGGTTTTTATTCATCTTC+TGG + chr7_1:59276786-59276805 Msa1027050:CDS 25.0%
!! TAGGTTTTTATTCATCTTCT+GGG + chr7_1:59276787-59276806 Msa1027050:CDS 25.0%
!!! TGTTTTGATATGATGCATTA+TGG + chr7_1:59276879-59276898 Msa1027050:CDS 25.0%
! AATTGAACCTTTCATGTAAA+GGG - chr7_1:59277007-59277026 None:intergenic 25.0%
! AAATTGAACCTTTCATGTAA+AGG - chr7_1:59277008-59277027 None:intergenic 25.0%
! AACACCTATAGTAGAATATA+TGG + chr7_1:59277469-59277488 Msa1027050:intron 25.0%
!! TAGAATATATGGTGGAAAAT+AGG + chr7_1:59277480-59277499 Msa1027050:intron 25.0%
! TGAAGTGACATTTCTTTATT+TGG + chr7_1:59278207-59278226 Msa1027050:intron 25.0%
!! TATTTGGTATTTGTGCTATT+CGG + chr7_1:59278223-59278242 Msa1027050:intron 25.0%
! TATACAAAATATTCATGTGC+AGG + chr7_1:59278350-59278369 Msa1027050:intron 25.0%
! ATGCAAAGCAAACATAATTT+AGG - chr7_1:59278628-59278647 None:intergenic 25.0%
! GTCAATTGGAATGATTATTT+GGG + chr7_1:59278699-59278718 Msa1027050:intron 25.0%
! ATGAATTTCTCAATGGTAAT+TGG - chr7_1:59278731-59278750 None:intergenic 25.0%
! AGACATAATGAATTTCTCAA+TGG - chr7_1:59278738-59278757 None:intergenic 25.0%
!!! AAATGATAATAGGTGTTGAT+TGG + chr7_1:59279029-59279048 Msa1027050:intron 25.0%
!!! ATATTGTTGGTAGTAGTAAA+TGG + chr7_1:59279052-59279071 Msa1027050:intron 25.0%
! TGTAGTTAACTAATACAGTA+TGG + chr7_1:59279136-59279155 Msa1027050:intron 25.0%
! GGAATCAGGTTATAAAAATT+TGG + chr7_1:59279157-59279176 Msa1027050:intron 25.0%
!! CTAAGAAATGAATTTTCAGA+GGG - chr7_1:59279241-59279260 None:intergenic 25.0%
! TGCATCAGATTATTAGAATT+AGG + chr7_1:59279440-59279459 Msa1027050:intron 25.0%
! AATTAGGAAAACATCAGAAT+GGG + chr7_1:59279456-59279475 Msa1027050:intron 25.0%
!! TTAAGAAATGAATTTCTGGA+GGG - chr7_1:59279523-59279542 None:intergenic 25.0%
! ATGCTTAAGAAATGAATTTC+TGG - chr7_1:59279527-59279546 None:intergenic 25.0%
!! TCTTAAGCATATCTTTTGTT+TGG + chr7_1:59279537-59279556 Msa1027050:intron 25.0%
!!! CTTAAGCATATCTTTTGTTT+GGG + chr7_1:59279538-59279557 Msa1027050:intron 25.0%
! CAATATATTTGTGTATGCAA+TGG - chr7_1:59279752-59279771 None:intergenic 25.0%
! TACTATCATCATGTTAATGA+GGG - chr7_1:59280064-59280083 None:intergenic 25.0%
! TTACTATCATCATGTTAATG+AGG - chr7_1:59280065-59280084 None:intergenic 25.0%
! TTATTGAATAAGAACACGAT+CGG - chr7_1:59280172-59280191 None:intergenic 25.0%
!!! GATCATTTTAATTCAAACAC+GGG + chr7_1:59280452-59280471 Msa1027050:intron 25.0%
! AACACCAGCAATAAATAATT+GGG - chr7_1:59280817-59280836 None:intergenic 25.0%
! TAACACCAGCAATAAATAAT+TGG - chr7_1:59280818-59280837 None:intergenic 25.0%
! TAGTTCCAAATTATTCTATG+AGG + chr7_1:59280866-59280885 Msa1027050:intron 25.0%
!! TACCATCAGATTTGTTTAAA+TGG + chr7_1:59280984-59281003 Msa1027050:intron 25.0%
! ATCCATTTAAACAAATCTGA+TGG - chr7_1:59280989-59281008 None:intergenic 25.0%
!!! AATGAAGAACAGTTGATAAA+AGG - chr7_1:59281018-59281037 None:intergenic 25.0%
!! TTCATTTTATATAGATCCTG+AGG + chr7_1:59281032-59281051 Msa1027050:intron 25.0%
!! GATAACTTGTATCGTAATTA+TGG + chr7_1:59281389-59281408 Msa1027050:intron 25.0%
! ATAGATAGATGCTCATATTA+AGG - chr7_1:59281598-59281617 None:intergenic 25.0%
! TAATGTTTATATAGTGCACA+AGG + chr7_1:59281624-59281643 Msa1027050:intron 25.0%
! ATAATCTATCCAACTATTTG+GGG - chr7_1:59282065-59282084 None:intergenic 25.0%
! CAATAATCTATCCAACTATT+TGG - chr7_1:59282067-59282086 None:intergenic 25.0%
! ATTAATGAATTATTGAGTCG+TGG + chr7_1:59282208-59282227 Msa1027050:intron 25.0%
!! ATTGACATTAATTTTCGTAC+AGG + chr7_1:59282431-59282450 Msa1027050:intron 25.0%
!! CTAAAGGACTATCTAAAATT+TGG - chr7_1:59282500-59282519 None:intergenic 25.0%
! GTAGTAGTTGTTATATCTAA+AGG - chr7_1:59282516-59282535 None:intergenic 25.0%
! CTAACCAAACAAAAATGAAA+AGG - chr7_1:59282590-59282609 None:intergenic 25.0%
!! TTAGTTCATTTTCATACAGT+TGG + chr7_1:59282606-59282625 Msa1027050:intron 25.0%
! AATCATTTATTCTCTATCTC+CGG + chr7_1:59282767-59282786 Msa1027050:intron 25.0%
!! CATGTCTATTTAGTGTTTTT+GGG - chr7_1:59282795-59282814 None:intergenic 25.0%
!! ACATGTCTATTTAGTGTTTT+TGG - chr7_1:59282796-59282815 None:intergenic 25.0%
! AATATATATGATCCATCTAG+TGG + chr7_1:59283188-59283207 Msa1027050:intron 25.0%
! ATATATATGATCCATCTAGT+GGG + chr7_1:59283189-59283208 Msa1027050:intron 25.0%
! ACTGTATTAACACAATTTAG+CGG - chr7_1:59283255-59283274 None:intergenic 25.0%
! TAGAAAAGTCAGAAAATCAA+TGG + chr7_1:59283549-59283568 Msa1027050:intron 25.0%
!!! ATTATTGATTTCTTCATCGA+TGG + chr7_1:59283622-59283641 Msa1027050:intron 25.0%
! AAGTCTTCATATTAAATGGA+AGG + chr7_1:59283823-59283842 Msa1027050:intron 25.0%
!!! AAACAGTAGGTTTTGTAATT+AGG - chr7_1:59284042-59284061 None:intergenic 25.0%
!!! TGTATTATTGCTTTTTCGAA+AGG + chr7_1:59284967-59284986 Msa1027050:three_prime_UTR 25.0%
!!! ATATTCGGTTTTGTTTGGAT+TGG - chr7_1:59276622-59276641 None:intergenic 30.0%
!!! GCAAAATATTCGGTTTTGTT+TGG - chr7_1:59276627-59276646 None:intergenic 30.0%
!! AAAACCGATTCGTGTTTATA+TGG + chr7_1:59276851-59276870 Msa1027050:CDS 30.0%
ATTGAACCTTTCATGTAAAG+GGG - chr7_1:59277006-59277025 None:intergenic 30.0%
! AACAGCTTTTTATCCAGAAA+TGG - chr7_1:59277071-59277090 None:intergenic 30.0%
TTGTACTTACATGGTATGTA+TGG + chr7_1:59277154-59277173 Msa1027050:intron 30.0%
ATCGTCAATCTTATAGTTGT+AGG - chr7_1:59277307-59277326 None:intergenic 30.0%
ATAAGATTGACGATGTTGTA+TGG + chr7_1:59277313-59277332 Msa1027050:intron 30.0%
AGATGTGATAGGATTAGAAA+TGG + chr7_1:59277424-59277443 Msa1027050:intron 30.0%
ACCTATAGTAGAATATATGG+TGG + chr7_1:59277472-59277491 Msa1027050:intron 30.0%
TCCACCATATATTCTACTAT+AGG - chr7_1:59277476-59277495 None:intergenic 30.0%
GATTTGTAGATTCTGTACTA+AGG + chr7_1:59277528-59277547 Msa1027050:intron 30.0%
TAATGAGCTGAACCTAAATA+TGG + chr7_1:59277631-59277650 Msa1027050:intron 30.0%
TGGCTACATGAATCAAATTA+CGG - chr7_1:59277676-59277695 None:intergenic 30.0%
AGTTGAACTCATTTCTGATT+TGG + chr7_1:59277812-59277831 Msa1027050:intron 30.0%
TGCGCTTTATCTGTTTATAA+CGG - chr7_1:59278115-59278134 None:intergenic 30.0%
TTATAAACAGATAAAGCGCA+CGG + chr7_1:59278115-59278134 Msa1027050:CDS 30.0%
AGAAGAATGATTATGAGTGT+CGG - chr7_1:59278411-59278430 None:intergenic 30.0%
AGAATTGTTCAGTTCTCAAA+CGG + chr7_1:59278533-59278552 Msa1027050:CDS 30.0%
GGTCAATTGGAATGATTATT+TGG + chr7_1:59278698-59278717 Msa1027050:intron 30.0%
AACAAGTTCATAAAACAAGC+CGG - chr7_1:59278799-59278818 None:intergenic 30.0%
!! AGTTGGTAGCAAATGATAAT+AGG + chr7_1:59279019-59279038 Msa1027050:intron 30.0%
TTTCAAAACAAACTCTACCT+TGG - chr7_1:59279102-59279121 None:intergenic 30.0%
!!! AAGGTAGAGTTTGTTTTGAA+AGG + chr7_1:59279101-59279120 Msa1027050:intron 30.0%
AACTAATACAGTATGGAATC+AGG + chr7_1:59279143-59279162 Msa1027050:intron 30.0%
AAATTTGGAAAACAGCAGAA+TGG + chr7_1:59279172-59279191 Msa1027050:intron 30.0%
! CCTAAGAAATGAATTTTCAG+AGG - chr7_1:59279242-59279261 None:intergenic 30.0%
! CCTCTGAAAATTCATTTCTT+AGG + chr7_1:59279239-59279258 Msa1027050:intron 30.0%
GCTCAAACATATATGCTATA+GGG + chr7_1:59279362-59279381 Msa1027050:intron 30.0%
AACATATATGCTATAGGGTT+TGG + chr7_1:59279367-59279386 Msa1027050:intron 30.0%
ACATATATGCTATAGGGTTT+GGG + chr7_1:59279368-59279387 Msa1027050:intron 30.0%
GAATTAGGAAAACATCAGAA+TGG + chr7_1:59279455-59279474 Msa1027050:intron 30.0%
ATTAGGAAAACATCAGAATG+GGG + chr7_1:59279457-59279476 Msa1027050:intron 30.0%
! CTTAAGAAATGAATTTCTGG+AGG - chr7_1:59279524-59279543 None:intergenic 30.0%
ACTGCTTTAACAATTACCAT+AGG - chr7_1:59279595-59279614 None:intergenic 30.0%
! CTACTGTGTAGTTCTTTTTA+CGG - chr7_1:59279633-59279652 None:intergenic 30.0%
CAATCACAGGTGTAAAAAAA+AGG - chr7_1:59279703-59279722 None:intergenic 30.0%
GGACAGAACAAAAATACTAT+AGG - chr7_1:59280006-59280025 None:intergenic 30.0%
TGATCAGAATCACAATTTCA+GGG - chr7_1:59280437-59280456 None:intergenic 30.0%
ATGATCAGAATCACAATTTC+AGG - chr7_1:59280438-59280457 None:intergenic 30.0%
ATAACCACTTTAAGCAACTT+TGG - chr7_1:59280487-59280506 None:intergenic 30.0%
! TTGCTTAAAGTGGTTATTTC+AGG + chr7_1:59280490-59280509 Msa1027050:intron 30.0%
! TTAAAGTGGTTATTTCAGGA+AGG + chr7_1:59280494-59280513 Msa1027050:intron 30.0%
TAAATTGGAAGGACACAAAT+AGG + chr7_1:59280540-59280559 Msa1027050:intron 30.0%
! ATAACGGAATTTGAACAAAC+TGG - chr7_1:59280617-59280636 None:intergenic 30.0%
GTTATAGCACTGTAGTATAA+CGG - chr7_1:59280633-59280652 None:intergenic 30.0%
ACAAATCGTTATTGTTCTGT+GGG - chr7_1:59280695-59280714 None:intergenic 30.0%
AACAAATCGTTATTGTTCTG+TGG - chr7_1:59280696-59280715 None:intergenic 30.0%
!! AATTGGGTCTTATTTGGATA+TGG - chr7_1:59280801-59280820 None:intergenic 30.0%
AAGACCCAATTATTTATTGC+TGG + chr7_1:59280810-59280829 Msa1027050:intron 30.0%
AATGACAGTCTAGTACAATA+AGG - chr7_1:59280943-59280962 None:intergenic 30.0%
TCGTTGTTATCAAAAGTGAA+TGG + chr7_1:59281183-59281202 Msa1027050:intron 30.0%
ATCTGCAATGGAATTATTGT+TGG + chr7_1:59281219-59281238 Msa1027050:intron 30.0%
! TCACTCTAAGAAGTTTGATA+TGG - chr7_1:59281332-59281351 None:intergenic 30.0%
! TATCGTAATTATGGAAGCAT+GGG + chr7_1:59281398-59281417 Msa1027050:intron 30.0%
TCACTCTTAATCCTATAAAC+TGG + chr7_1:59281426-59281445 Msa1027050:intron 30.0%
CACTCTTAATCCTATAAACT+GGG + chr7_1:59281427-59281446 Msa1027050:intron 30.0%
ACTCTTAATCCTATAAACTG+GGG + chr7_1:59281428-59281447 Msa1027050:intron 30.0%
GATGCTCATATTAAGGTAAA+TGG - chr7_1:59281591-59281610 None:intergenic 30.0%
TATGTGGATGAGGTTATAAT+TGG + chr7_1:59281748-59281767 Msa1027050:CDS 30.0%
TTAAGAAATGTAGCGAAAAC+TGG + chr7_1:59282093-59282112 Msa1027050:intron 30.0%
! AAGATTTTGTGACAATTTGC+TGG + chr7_1:59282134-59282153 Msa1027050:intron 30.0%
!! AATTTGCTGGTTGATTCAAT+CGG + chr7_1:59282147-59282166 Msa1027050:intron 30.0%
AACATCTCATTAGTTGTTCA+TGG + chr7_1:59282285-59282304 Msa1027050:CDS 30.0%
!!! AGAGAATACTGATTTTCAGA+AGG + chr7_1:59282317-59282336 Msa1027050:CDS 30.0%
CAACTACTACAATAATTAGG+AGG + chr7_1:59282526-59282545 Msa1027050:CDS 30.0%
!! CAGACCTTTTCATTTTTGTT+TGG + chr7_1:59282583-59282602 Msa1027050:intron 30.0%
! CACCATATTCAATACAGTTT+TGG + chr7_1:59282737-59282756 Msa1027050:intron 30.0%
AGCCAAAACTGTATTGAATA+TGG - chr7_1:59282742-59282761 None:intergenic 30.0%
ATCATTTATTCTCTATCTCC+GGG + chr7_1:59282768-59282787 Msa1027050:intron 30.0%
!! ATTATCAAGTTGAAGCAAGT+TGG - chr7_1:59283296-59283315 None:intergenic 30.0%
GTCATGATAATACAGAAAGT+GGG - chr7_1:59283412-59283431 None:intergenic 30.0%
AGTCATGATAATACAGAAAG+TGG - chr7_1:59283413-59283432 None:intergenic 30.0%
TGATTGTGGTAAGAATGTAT+AGG + chr7_1:59283449-59283468 Msa1027050:intron 30.0%
! ACTTTTCTAACTATGCACTT+CGG - chr7_1:59283538-59283557 None:intergenic 30.0%
TCTTCATATTAAATGGAAGG+TGG + chr7_1:59283826-59283845 Msa1027050:intron 30.0%
! AGTGTGGTTTTCTTCTTTAT+TGG + chr7_1:59283902-59283921 Msa1027050:intron 30.0%
! GTGTGGTTTTCTTCTTTATT+GGG + chr7_1:59283903-59283922 Msa1027050:intron 30.0%
! AAGAAGTACAATGGTTGAAA+AGG - chr7_1:59283969-59283988 None:intergenic 30.0%
! TCTCAAGAAAAGAAGTACAA+TGG - chr7_1:59283978-59283997 None:intergenic 30.0%
! ACTTCTTTTCTTGAGAGATT+TGG + chr7_1:59283982-59284001 Msa1027050:intron 30.0%
! TTCTTGAGAGATTTGGTATA+CGG + chr7_1:59283989-59284008 Msa1027050:intron 30.0%
! ATCTTGCAAAAAGGTCTTTT+TGG - chr7_1:59284306-59284325 None:intergenic 30.0%
TCATTTGGAGACATAAACAT+TGG + chr7_1:59284586-59284605 Msa1027050:three_prime_UTR 30.0%
CATTTGGAGACATAAACATT+GGG + chr7_1:59284587-59284606 Msa1027050:three_prime_UTR 30.0%
ATTTGGAGACATAAACATTG+GGG + chr7_1:59284588-59284607 Msa1027050:three_prime_UTR 30.0%
AACAACGATGTCTGTATCAA+TGG + chr7_1:59276481-59276500 Msa1027050:five_prime_UTR 35.0%
AATGGGGAGGAATAAGAAAA+AGG - chr7_1:59276575-59276594 None:intergenic 35.0%
AATTGAATTGATGAATGGGG+AGG - chr7_1:59276588-59276607 None:intergenic 35.0%
! AGTTTTCTTCCTCATTCGAA+GGG - chr7_1:59276667-59276686 None:intergenic 35.0%
GAATGAGGAAGAAAACTCAT+CGG + chr7_1:59276670-59276689 Msa1027050:five_prime_UTR 35.0%
TCATCGGTGAATGAACAAAA+TGG + chr7_1:59276686-59276705 Msa1027050:exon 35.0%
CATCGGTGAATGAACAAAAT+GGG + chr7_1:59276687-59276706 Msa1027050:exon 35.0%
ATCGGTGAATGAACAAAATG+GGG + chr7_1:59276688-59276707 Msa1027050:exon 35.0%
! TAGCAGTGTTGAATCTAATG+CGG + chr7_1:59276719-59276738 Msa1027050:CDS 35.0%
ATCGTTGGTGTATCAGTATT+AGG + chr7_1:59276768-59276787 Msa1027050:CDS 35.0%
! TTCTTTTTCCACAACCCAAA+TGG - chr7_1:59276813-59276832 None:intergenic 35.0%
!! TTTGGGTTGTGGAAAAAGAA+TGG + chr7_1:59276813-59276832 Msa1027050:CDS 35.0%
GGAAAAAGAATGGTAGAAGA+AGG + chr7_1:59276823-59276842 Msa1027050:CDS 35.0%
CCATCCATATAAACACGAAT+CGG - chr7_1:59276858-59276877 None:intergenic 35.0%
! CTTGGTGATCAATTGATTGT+TGG + chr7_1:59276933-59276952 Msa1027050:CDS 35.0%
ATCATTGAATTCAAGCTCAG+TGG + chr7_1:59277227-59277246 Msa1027050:intron 35.0%
! TTGATATAGTGTTGGATGTG+TGG + chr7_1:59277394-59277413 Msa1027050:intron 35.0%
!! ATTGATTGTGATTTGCTGAC+AGG + chr7_1:59277755-59277774 Msa1027050:intron 35.0%
TTATGGTGAATGCTGTGAAA+TGG + chr7_1:59277934-59277953 Msa1027050:CDS 35.0%
TATGGTGAATGCTGTGAAAT+GGG + chr7_1:59277935-59277954 Msa1027050:CDS 35.0%
AATTCCTCAGTAATGGCATA+TGG - chr7_1:59277984-59278003 None:intergenic 35.0%
CTTCATGAATTCCTCAGTAA+TGG - chr7_1:59277991-59278010 None:intergenic 35.0%
! CTTTGTTTGTCGTTGTTGTA+TGG + chr7_1:59278246-59278265 Msa1027050:intron 35.0%
TTACAAAGACAGTTCAGCAA+TGG + chr7_1:59278431-59278450 Msa1027050:CDS 35.0%
TAGGCAGAAAATGAGATACA+CGG - chr7_1:59278505-59278524 None:intergenic 35.0%
TGAACAATTCTACGAGATGT+AGG - chr7_1:59278524-59278543 None:intergenic 35.0%
GAATTGTTCAGTTCTCAAAC+GGG + chr7_1:59278534-59278553 Msa1027050:CDS 35.0%
TCAAGCATCACAAAGATTCA+AGG - chr7_1:59278651-59278670 None:intergenic 35.0%
TATGTTTCACGTCGTGATAT+TGG + chr7_1:59278677-59278696 Msa1027050:intron 35.0%
TGTCTTATGTCCTTGTCAAT+TGG + chr7_1:59278753-59278772 Msa1027050:intron 35.0%
! TCACTTGAGAATTTTTCGTC+CGG + chr7_1:59278777-59278796 Msa1027050:intron 35.0%
!! ACTTGTTATTTACAGGGACT+TGG + chr7_1:59278812-59278831 Msa1027050:intron 35.0%
!! CTTGTTATTTACAGGGACTT+GGG + chr7_1:59278813-59278832 Msa1027050:intron 35.0%
! TTTTCTATTTCCTAAGGCCT+AGG - chr7_1:59278866-59278885 None:intergenic 35.0%
GGTTTAAGCTAAGGGTTAAA+AGG - chr7_1:59278937-59278956 None:intergenic 35.0%
TAGCAACATGGCTAAATATG+GGG - chr7_1:59278979-59278998 None:intergenic 35.0%
CTAGCAACATGGCTAAATAT+GGG - chr7_1:59278980-59278999 None:intergenic 35.0%
ATTGATGTGGGGAATTAAGT+TGG + chr7_1:59279002-59279021 Msa1027050:intron 35.0%
!! AGGTGTTGATTGGATATTGT+TGG + chr7_1:59279039-59279058 Msa1027050:intron 35.0%
GTAGTAAATGGAACGATTCA+AGG + chr7_1:59279064-59279083 Msa1027050:intron 35.0%
CTTAGGTATGTCTGTTTCAT+TGG + chr7_1:59279256-59279275 Msa1027050:intron 35.0%
!! CTAAGCTGCTGATTTGTAAT+AGG + chr7_1:59279279-59279298 Msa1027050:intron 35.0%
! ATTAAGCAACTTGCTTCTAC+TGG + chr7_1:59279302-59279321 Msa1027050:intron 35.0%
! TTAAGCAACTTGCTTCTACT+GGG + chr7_1:59279303-59279322 Msa1027050:intron 35.0%
CGCTCAAACATATATGCTAT+AGG + chr7_1:59279361-59279380 Msa1027050:intron 35.0%
!! CATTTCCTTTTAGTTGCCTA+TGG + chr7_1:59279413-59279432 Msa1027050:intron 35.0%
ATACACCATAGGCAACTAAA+AGG - chr7_1:59279421-59279440 None:intergenic 35.0%
TAATCTGATGCATACACCAT+AGG - chr7_1:59279432-59279451 None:intergenic 35.0%
TTAGGAAAACATCAGAATGG+GGG + chr7_1:59279458-59279477 Msa1027050:intron 35.0%
! AAATGAATTTCTGGAGGGTT+AGG - chr7_1:59279518-59279537 None:intergenic 35.0%
!! ATATCTTTTGTTTGGGTTCG+TGG + chr7_1:59279545-59279564 Msa1027050:intron 35.0%
!! TATCTTTTGTTTGGGTTCGT+GGG + chr7_1:59279546-59279565 Msa1027050:intron 35.0%
AGGTGTAAAAAAAAGGAGAC+TGG - chr7_1:59279696-59279715 None:intergenic 35.0%
AACCATGAAAGTTCAATCAC+AGG - chr7_1:59279716-59279735 None:intergenic 35.0%
! GATTTCTTGCTACTTAGAGA+TGG + chr7_1:59279771-59279790 Msa1027050:intron 35.0%
ATATATACAATCCGTGCATC+AGG - chr7_1:59279893-59279912 None:intergenic 35.0%
! GCACGGATTGTATATATAGA+TGG + chr7_1:59279896-59279915 Msa1027050:CDS 35.0%
AGAGATAACAATCTGGCAAA+TGG - chr7_1:59280202-59280221 None:intergenic 35.0%
ATTTGCCAGATTGTTATCTC+TGG + chr7_1:59280201-59280220 Msa1027050:intron 35.0%
TATTGCCAGAGATAACAATC+TGG - chr7_1:59280209-59280228 None:intergenic 35.0%
GGTTATCAGATGAGTTTGTA+AGG + chr7_1:59280245-59280264 Msa1027050:intron 35.0%
TATCAGATGAGTTTGTAAGG+AGG + chr7_1:59280248-59280267 Msa1027050:intron 35.0%
ATCAGATGAGTTTGTAAGGA+GGG + chr7_1:59280249-59280268 Msa1027050:intron 35.0%
GAGGATAAGATGTTCACATT+AGG - chr7_1:59280324-59280343 None:intergenic 35.0%
ACTACCAAAGTTGCTTAAAG+TGG + chr7_1:59280480-59280499 Msa1027050:intron 35.0%
!! AATGGTGTCATGTGGTAAAT+TGG + chr7_1:59280525-59280544 Msa1027050:intron 35.0%
GACAAAGTGTAGTCAAATAG+CGG - chr7_1:59280657-59280676 None:intergenic 35.0%
! TATTGCTGGTGTTAACCTAT+AGG + chr7_1:59280824-59280843 Msa1027050:intron 35.0%
AAATCTGATGGTAACAAGCA+TGG - chr7_1:59280977-59280996 None:intergenic 35.0%
TCTTCTTGTTGGAATACACA+CGG + chr7_1:59281078-59281097 Msa1027050:CDS 35.0%
GTATCGTAATTATGGAAGCA+TGG + chr7_1:59281397-59281416 Msa1027050:intron 35.0%
CTCTTAATCCTATAAACTGG+GGG + chr7_1:59281429-59281448 Msa1027050:intron 35.0%
TCTTAATCCTATAAACTGGG+GGG + chr7_1:59281430-59281449 Msa1027050:intron 35.0%
AAGTTTCTTGTCTATCACTC+TGG - chr7_1:59281549-59281568 None:intergenic 35.0%
CACTTAGACTTCTTTCATGA+AGG - chr7_1:59281714-59281733 None:intergenic 35.0%
AATTAGACTGACCATATCCT+TGG - chr7_1:59281791-59281810 None:intergenic 35.0%
!!! ACCACTCTTTTAAGTTGTTC+TGG + chr7_1:59281982-59282001 Msa1027050:intron 35.0%
ACCAGAACAACTTAAAAGAG+TGG - chr7_1:59281986-59282005 None:intergenic 35.0%
!!! TTAGTGCTTTTTCTTGCAAG+AGG + chr7_1:59282360-59282379 Msa1027050:intron 35.0%
!!! TAGTGCTTTTTCTTGCAAGA+GGG + chr7_1:59282361-59282380 Msa1027050:intron 35.0%
TGAAAAGGTCTGAATTTACC+TGG - chr7_1:59282575-59282594 None:intergenic 35.0%
!!! TATTTAGTGTTTTTGGGTCC+CGG - chr7_1:59282789-59282808 None:intergenic 35.0%
ACATGTATTTCATACGGTGT+TGG + chr7_1:59282810-59282829 Msa1027050:intron 35.0%
CTTTGAGTGAAAAAGAGTCT+TGG - chr7_1:59282917-59282936 None:intergenic 35.0%
!! CTTGCTTCAACTTGATAATG+AGG + chr7_1:59283297-59283316 Msa1027050:intron 35.0%
! AATTTGCTTGGAGATGATGA+TGG + chr7_1:59283329-59283348 Msa1027050:intron 35.0%
TATTATATGCTGCGTGATTG+TGG + chr7_1:59283435-59283454 Msa1027050:intron 35.0%
! ATCGATGGTTGATACTTTAG+AGG + chr7_1:59283637-59283656 Msa1027050:intron 35.0%
! TGATTTGTGTGAAGTGTTAG+TGG + chr7_1:59283768-59283787 Msa1027050:intron 35.0%
! GATTTGTGTGAAGTGTTAGT+GGG + chr7_1:59283769-59283788 Msa1027050:intron 35.0%
GCAAATTGAAGAGTTGTGAT+TGG - chr7_1:59284122-59284141 None:intergenic 35.0%
AAATAAAGGCAGTTGTTGTG+TGG + chr7_1:59284164-59284183 Msa1027050:intron 35.0%
! AAAATTACACTGACTGTGCA+TGG + chr7_1:59284214-59284233 Msa1027050:intron 35.0%
!! TGCAAAAAGGTCTTTTTGGT+TGG - chr7_1:59284302-59284321 None:intergenic 35.0%
! AGACCTTTTTGCAAGATCTT+AGG + chr7_1:59284309-59284328 Msa1027050:intron 35.0%
! ACTGATTCATGTCTGTCATT+TGG + chr7_1:59284571-59284590 Msa1027050:exon 35.0%
TTTGGAGACATAAACATTGG+GGG + chr7_1:59284589-59284608 Msa1027050:three_prime_UTR 35.0%
ACGTTTATTCCCTTCGAATG+AGG + chr7_1:59276655-59276674 Msa1027050:five_prime_UTR 40.0%
! GAGTTTTCTTCCTCATTCGA+AGG - chr7_1:59276668-59276687 None:intergenic 40.0%
TCGGTGAATGAACAAAATGG+GGG + chr7_1:59276689-59276708 Msa1027050:exon 40.0%
TATTCATCTTCTGGGCCATT+TGG + chr7_1:59276795-59276814 Msa1027050:CDS 40.0%
ATTCATCTTCTGGGCCATTT+GGG + chr7_1:59276796-59276815 Msa1027050:CDS 40.0%
! CCGATTCGTGTTTATATGGA+TGG + chr7_1:59276855-59276874 Msa1027050:CDS 40.0%
CTTTCATGTAAAGGGGTAAC+AGG - chr7_1:59276999-59277018 None:intergenic 40.0%
CTGTTACCCCTTTACATGAA+AGG + chr7_1:59276997-59277016 Msa1027050:CDS 40.0%
AAGCTCAGTGGTTGAAACAT+AGG + chr7_1:59277239-59277258 Msa1027050:intron 40.0%
!! GAACAAAGTGTTGAACGATG+AGG + chr7_1:59277335-59277354 Msa1027050:intron 40.0%
CGGAGATCTTGATATAGTGT+TGG + chr7_1:59277386-59277405 Msa1027050:intron 40.0%
GTGGTAAGACTAGATGTGAT+AGG + chr7_1:59277413-59277432 Msa1027050:intron 40.0%
GGCAATATTAGAGAGAGTTG+AGG + chr7_1:59277445-59277464 Msa1027050:intron 40.0%
! ATATGGTGGAAAATAGGCTC+AGG + chr7_1:59277486-59277505 Msa1027050:intron 40.0%
ACTAAGGAGAGTAGATCAGA+TGG + chr7_1:59277544-59277563 Msa1027050:intron 40.0%
TAGATCAGATGGAGTTTAGC+CGG + chr7_1:59277555-59277574 Msa1027050:intron 40.0%
TTCCTCTATCTCTAGTGATC+CGG - chr7_1:59277577-59277596 None:intergenic 40.0%
CTTCGATACACTCACTATCA+GGG - chr7_1:59277794-59277813 None:intergenic 40.0%
ACTTCGATACACTCACTATC+AGG - chr7_1:59277795-59277814 None:intergenic 40.0%
! ATTATGGTGATGTGTGTGAC+AGG + chr7_1:59277907-59277926 Msa1027050:intron 40.0%
!! TGTGTGTGACAGGTTGATTA+TGG + chr7_1:59277917-59277936 Msa1027050:intron 40.0%
TGCTTATGCTCATGCCAAAA+AGG + chr7_1:59278085-59278104 Msa1027050:CDS 40.0%
! TTTATAACGGCCAGCCTTTT+TGG - chr7_1:59278102-59278121 None:intergenic 40.0%
!! GTTTCCAGCACTGATATTGT+TGG + chr7_1:59278143-59278162 Msa1027050:CDS 40.0%
TGCTTCTCTGTGTAAGAGAA+AGG + chr7_1:59278378-59278397 Msa1027050:CDS 40.0%
AGGCAGAAAATGAGATACAC+GGG - chr7_1:59278504-59278523 None:intergenic 40.0%
ACGTCGTGATATTGGTCAAT+TGG + chr7_1:59278685-59278704 Msa1027050:intron 40.0%
CTCAAGTGATCCAATTGACA+AGG - chr7_1:59278766-59278785 None:intergenic 40.0%
! GCTCAACTGGTTTAAGCTAA+GGG - chr7_1:59278945-59278964 None:intergenic 40.0%
! AGCTCAACTGGTTTAAGCTA+AGG - chr7_1:59278946-59278965 None:intergenic 40.0%
AACATGGCTAAATATGGGGA+GGG - chr7_1:59278975-59278994 None:intergenic 40.0%
CCTAGCAACATGGCTAAATA+TGG - chr7_1:59278981-59279000 None:intergenic 40.0%
CCATATTTAGCCATGTTGCT+AGG + chr7_1:59278978-59278997 Msa1027050:intron 40.0%
!! ATGTTGCTAGGCATTGATGT+GGG + chr7_1:59278990-59279009 Msa1027050:intron 40.0%
TTTCGAAATCTCTTGTGCCT+TGG - chr7_1:59279330-59279349 None:intergenic 40.0%
AAGGCACAAGAGATTTCGAA+AGG + chr7_1:59279329-59279348 Msa1027050:intron 40.0%
AGGCACAAGAGATTTCGAAA+GGG + chr7_1:59279330-59279349 Msa1027050:intron 40.0%
GAACATGTTGTGATCACCTA+TGG + chr7_1:59279576-59279595 Msa1027050:intron 40.0%
CACCTGTGATTGAACTTTCA+TGG + chr7_1:59279711-59279730 Msa1027050:intron 40.0%
! GCTTTTGATCTCTTTCATGC+TGG + chr7_1:59279920-59279939 Msa1027050:CDS 40.0%
! CACCTTGTTTCTCAAATGCT+AGG + chr7_1:59280120-59280139 Msa1027050:intron 40.0%
GACCTAGCATTTGAGAAACA+AGG - chr7_1:59280125-59280144 None:intergenic 40.0%
TCTCTAGACCATACATTGCT+GGG + chr7_1:59280342-59280361 Msa1027050:intron 40.0%
AAAGGACAGCCCATTAATTG+AGG - chr7_1:59280370-59280389 None:intergenic 40.0%
! GTGGTTATTTCAGGAAGGAA+TGG + chr7_1:59280499-59280518 Msa1027050:intron 40.0%
TTCAGGAAGGAATGGAAGAA+TGG + chr7_1:59280507-59280526 Msa1027050:intron 40.0%
!! AATGGAAGAATGGTGTCATG+TGG + chr7_1:59280517-59280536 Msa1027050:intron 40.0%
GTGTCATGTGGTAAATTGGA+AGG + chr7_1:59280529-59280548 Msa1027050:intron 40.0%
TTGGAAGGACACAAATAGGA+AGG + chr7_1:59280544-59280563 Msa1027050:intron 40.0%
GAAGGCAGTATTGTCAATCA+CGG + chr7_1:59280578-59280597 Msa1027050:intron 40.0%
! GTATTGTCAATCACGGATTG+TGG + chr7_1:59280585-59280604 Msa1027050:intron 40.0%
TACAACACTATAGCCACTGT+TGG + chr7_1:59280731-59280750 Msa1027050:intron 40.0%
!! GGTCTTATTTGGATATGGTC+AGG - chr7_1:59280796-59280815 None:intergenic 40.0%
! GCTCTAAGTCAAAGACCTAT+AGG - chr7_1:59280842-59280861 None:intergenic 40.0%
! CGTGGAGATTTTCTTCTTGT+TGG + chr7_1:59281067-59281086 Msa1027050:CDS 40.0%
ATTGTTGGACAGTGTTGTAC+TGG + chr7_1:59281234-59281253 Msa1027050:intron 40.0%
CTTTCATGAAGGCTCATGAT+GGG - chr7_1:59281703-59281722 None:intergenic 40.0%
TCTTTCATGAAGGCTCATGA+TGG - chr7_1:59281704-59281723 None:intergenic 40.0%
AGGTTATAATTGGTGCACCA+TGG + chr7_1:59281758-59281777 Msa1027050:CDS 40.0%
GGTTATAATTGGTGCACCAT+GGG + chr7_1:59281759-59281778 Msa1027050:CDS 40.0%
ATAGCAGAATTCAAAGCAGC+TGG - chr7_1:59282190-59282209 None:intergenic 40.0%
GAGGATTGTATCAAATCACG+AGG + chr7_1:59282545-59282564 Msa1027050:CDS 40.0%
AGTGAAAAAGAGTCTTGGCT+TGG - chr7_1:59282912-59282931 None:intergenic 40.0%
!! TTGCTCACTTTTCTCACACA+AGG - chr7_1:59283007-59283026 None:intergenic 40.0%
GAGAAAAGTGAGCAAGATGT+TGG + chr7_1:59283012-59283031 Msa1027050:intron 40.0%
AGTGATCGAGTAGGATTGTA+AGG + chr7_1:59283065-59283084 Msa1027050:intron 40.0%
AGTAGGATTGTAAGGAGTGA+TGG + chr7_1:59283073-59283092 Msa1027050:intron 40.0%
ATGATCCATCTAGTGGGATA+AGG + chr7_1:59283195-59283214 Msa1027050:intron 40.0%
TCAAACCTTATCCCACTAGA+TGG - chr7_1:59283203-59283222 None:intergenic 40.0%
!! CAACTTGATAATGAGGCAGT+TGG + chr7_1:59283304-59283323 Msa1027050:intron 40.0%
GATTAAGAGATCGTTGTGAC+TGG + chr7_1:59283359-59283378 Msa1027050:intron 40.0%
TGTGGTAAGAATGTATAGGC+TGG + chr7_1:59283453-59283472 Msa1027050:intron 40.0%
AGGCTGGAAACTAAACAAGA+AGG + chr7_1:59283469-59283488 Msa1027050:intron 40.0%
TACATGAAACCAGCAACACA+CGG - chr7_1:59283722-59283741 None:intergenic 40.0%
AAGAAAACCACACTCCACAA+GGG - chr7_1:59283896-59283915 None:intergenic 40.0%
TGTTATGTCCTCACTTTCCT+TGG + chr7_1:59283928-59283947 Msa1027050:intron 40.0%
GGAAAACATAATGTGTGCCA+AGG - chr7_1:59283948-59283967 None:intergenic 40.0%
GAGCCTAAGATCTTGCAAAA+AGG - chr7_1:59284315-59284334 None:intergenic 40.0%
ATTTCCAAGCTTCATGCACA+TGG - chr7_1:59284370-59284389 None:intergenic 40.0%
CAGAAACGCAATGAGAAGAA+GGG + chr7_1:59284501-59284520 Msa1027050:intron 40.0%
TTGGAGACATAAACATTGGG+GGG + chr7_1:59284590-59284609 Msa1027050:three_prime_UTR 40.0%
! ATAAGGAGTGTGTGAAATCC+TGG - chr7_1:59284622-59284641 None:intergenic 40.0%
CGGTGAATGAACAAAATGGG+GGG + chr7_1:59276690-59276709 Msa1027050:exon 45.0%
! CAGTGTTGAATCTAATGCGG+CGG + chr7_1:59276722-59276741 Msa1027050:CDS 45.0%
TCATGTAAAGGGGTAACAGG+AGG - chr7_1:59276996-59277015 None:intergenic 45.0%
CGTATCGCATAAAACACACG+AGG - chr7_1:59277269-59277288 None:intergenic 45.0%
ATGTAGCCATTCCCACTTAG+CGG + chr7_1:59277687-59277706 Msa1027050:intron 45.0%
!! TGCTGTGAAATGGGTTGATG+AGG + chr7_1:59277944-59277963 Msa1027050:CDS 45.0%
GTAATGGCATATGGAGCTTC+AGG - chr7_1:59277975-59277994 None:intergenic 45.0%
AGCTCCATATGCCATTACTG+AGG + chr7_1:59277977-59277996 Msa1027050:CDS 45.0%
GATCCTTGTGTTCTACCTGA+TGG + chr7_1:59278056-59278075 Msa1027050:CDS 45.0%
GTTCCATCAGGTAGAACACA+AGG - chr7_1:59278062-59278081 None:intergenic 45.0%
GCATAAGCATCAGTTCCATC+AGG - chr7_1:59278074-59278093 None:intergenic 45.0%
TATGCTCATGCCAAAAAGGC+TGG + chr7_1:59278089-59278108 Msa1027050:CDS 45.0%
AAACAGATAAAGCGCACGGA+AGG + chr7_1:59278119-59278138 Msa1027050:CDS 45.0%
CTGACCAACAATATCAGTGC+TGG - chr7_1:59278150-59278169 None:intergenic 45.0%
AAAGACAGTTCAGCAATGGC+CGG + chr7_1:59278435-59278454 Msa1027050:CDS 45.0%
GGTCAGCAGAAGTTTGAAGA+CGG + chr7_1:59278458-59278477 Msa1027050:CDS 45.0%
TTGTTCAGTTCTCAAACGGG+AGG + chr7_1:59278537-59278556 Msa1027050:CDS 45.0%
TGTTCAGTTCTCAAACGGGA+GGG + chr7_1:59278538-59278557 Msa1027050:CDS 45.0%
ATTTACAGGGACTTGGGTCA+TGG + chr7_1:59278819-59278838 Msa1027050:intron 45.0%
TCATGGAGCAGTAAACTGAC+CGG + chr7_1:59278836-59278855 Msa1027050:intron 45.0%
CAACATGGCTAAATATGGGG+AGG - chr7_1:59278976-59278995 None:intergenic 45.0%
CACATCAATGCCTAGCAACA+TGG - chr7_1:59278991-59279010 None:intergenic 45.0%
!! CATGTTGCTAGGCATTGATG+TGG + chr7_1:59278989-59279008 Msa1027050:intron 45.0%
!! TGTTGCTAGGCATTGATGTG+GGG + chr7_1:59278991-59279010 Msa1027050:intron 45.0%
CAAGGTTTAACCAAGTGCCA+AGG + chr7_1:59279082-59279101 Msa1027050:intron 45.0%
ACAAACTCTACCTTGGCACT+TGG - chr7_1:59279095-59279114 None:intergenic 45.0%
GGCACAAGAGATTTCGAAAG+GGG + chr7_1:59279331-59279350 Msa1027050:intron 45.0%
GTCTCAAAGCAAGCATGTCT+TGG - chr7_1:59279656-59279675 None:intergenic 45.0%
CTTTCATGCTGGACATGTAG+AGG + chr7_1:59279931-59279950 Msa1027050:CDS 45.0%
GATGAGTTTGTAAGGAGGGT+AGG + chr7_1:59280253-59280272 Msa1027050:intron 45.0%
CAGCAATGTATGGTCTAGAG+AGG - chr7_1:59280343-59280362 None:intergenic 45.0%
CTCTCTAGACCATACATTGC+TGG + chr7_1:59280341-59280360 Msa1027050:intron 45.0%
TTGCTGGGAGCCTCAATTAA+TGG + chr7_1:59280357-59280376 Msa1027050:intron 45.0%
TGCTGGGAGCCTCAATTAAT+GGG + chr7_1:59280358-59280377 Msa1027050:intron 45.0%
! ATGGGCTGTCCTTTGATAGA+TGG + chr7_1:59280376-59280395 Msa1027050:intron 45.0%
TGGGCTGTCCTTTGATAGAT+GGG + chr7_1:59280377-59280396 Msa1027050:intron 45.0%
CCAAGAACCCCATCTATCAA+AGG - chr7_1:59280388-59280407 None:intergenic 45.0%
CCTTTGATAGATGGGGTTCT+TGG + chr7_1:59280385-59280404 Msa1027050:intron 45.0%
!! GGTTCTTGGTAATGCCTTCA+GGG + chr7_1:59280399-59280418 Msa1027050:intron 45.0%
! CACAAATAGGAAGGAGTGCA+TGG + chr7_1:59280553-59280572 Msa1027050:intron 45.0%
! CTGTGGGCAATGCACTATTT+TGG - chr7_1:59280679-59280698 None:intergenic 45.0%
TTTCCATTCCTCTCCAACAG+TGG - chr7_1:59280747-59280766 None:intergenic 45.0%
TCTGATGGTAACAAGCATGG+AGG - chr7_1:59280974-59280993 None:intergenic 45.0%
AAGAAAATCTCCACGATCCC+TGG - chr7_1:59281062-59281081 None:intergenic 45.0%
AGCACGTCGAAAATCTGCAA+TGG + chr7_1:59281207-59281226 Msa1027050:intron 45.0%
ACTATTGCCCCCCAGTTTAT+AGG - chr7_1:59281440-59281459 None:intergenic 45.0%
!! TTTGGCTTTGCAGTGCAACT+AGG + chr7_1:59281665-59281684 Msa1027050:intron 45.0%
!! TTGGCTTTGCAGTGCAACTA+GGG + chr7_1:59281666-59281685 Msa1027050:intron 45.0%
ATATCCTTGGACACTTCCCA+TGG - chr7_1:59281778-59281797 None:intergenic 45.0%
!! ATGGGAAGTGTCCAAGGATA+TGG + chr7_1:59281777-59281796 Msa1027050:CDS 45.0%
TGTACCTGACCCCAAATAGT+TGG + chr7_1:59282053-59282072 Msa1027050:intron 45.0%
! CTATCCAACTATTTGGGGTC+AGG - chr7_1:59282060-59282079 None:intergenic 45.0%
!! TTCAAAGCAGCTGGTTTGAG+AGG - chr7_1:59282181-59282200 None:intergenic 45.0%
!! CTTGCAAGAGGGTGTTAAGT+TGG + chr7_1:59282372-59282391 Msa1027050:intron 45.0%
AAGCTAATGGGAACGGCATA+TGG - chr7_1:59282468-59282487 None:intergenic 45.0%
ATATGCCGTTCCCATTAGCT+TGG + chr7_1:59282467-59282486 Msa1027050:CDS 45.0%
! TATGCCGTTCCCATTAGCTT+GGG + chr7_1:59282468-59282487 Msa1027050:CDS 45.0%
TGGAAGATGCCCAAGCTAAT+GGG - chr7_1:59282480-59282499 None:intergenic 45.0%
TTGGAAGATGCCCAAGCTAA+TGG - chr7_1:59282481-59282500 None:intergenic 45.0%
ATCAAATCACGAGGCATACC+AGG + chr7_1:59282554-59282573 Msa1027050:CDS 45.0%
AAGTGAGCAAGATGTTGGAG+TGG + chr7_1:59283017-59283036 Msa1027050:intron 45.0%
AGTGGCACTTATTGAAGCGT+TGG + chr7_1:59283035-59283054 Msa1027050:intron 45.0%
GGTGAGAAAAGTGATCGAGT+AGG + chr7_1:59283056-59283075 Msa1027050:intron 45.0%
!! AGGCAGTTGGCTAATTTGCT+TGG + chr7_1:59283317-59283336 Msa1027050:intron 45.0%
! GGTTGATACTTTAGAGGAGC+TGG + chr7_1:59283643-59283662 Msa1027050:intron 45.0%
ACATGAAACCAGCAACACAC+GGG - chr7_1:59283721-59283740 None:intergenic 45.0%
CAAGGGAAAACTCTTGGTCT+TGG - chr7_1:59283879-59283898 None:intergenic 45.0%
! AGACCAAGAGTTTTCCCTTG+TGG + chr7_1:59283879-59283898 Msa1027050:intron 45.0%
ACTCCACAAGGGAAAACTCT+TGG - chr7_1:59283885-59283904 None:intergenic 45.0%
GAAGAAAACCACACTCCACA+AGG - chr7_1:59283897-59283916 None:intergenic 45.0%
AATGTGTGCCAAGGAAAGTG+AGG - chr7_1:59283939-59283958 None:intergenic 45.0%
TAGGCTCATTACTCCCCATT+AGG + chr7_1:59284328-59284347 Msa1027050:intron 45.0%
! AAAGGAGGTGCAACCTAATG+GGG - chr7_1:59284344-59284363 None:intergenic 45.0%
! CAAAGGAGGTGCAACCTAAT+GGG - chr7_1:59284345-59284364 None:intergenic 45.0%
GCAGAAACGCAATGAGAAGA+AGG + chr7_1:59284500-59284519 Msa1027050:intron 45.0%
AATCTAATGCGGCGGTGAAG+TGG + chr7_1:59276730-59276749 Msa1027050:CDS 50.0%
ATCTAATGCGGCGGTGAAGT+GGG + chr7_1:59276731-59276750 Msa1027050:CDS 50.0%
GTGGTCGGAGTTATCATCGT+TGG + chr7_1:59276753-59276772 Msa1027050:CDS 50.0%
TGGTGGAAAATAGGCTCAGG+TGG + chr7_1:59277489-59277508 Msa1027050:intron 50.0%
AGCCGGATCACTAGAGATAG+AGG + chr7_1:59277572-59277591 Msa1027050:intron 50.0%
TGTAGCCATTCCCACTTAGC+GGG + chr7_1:59277688-59277707 Msa1027050:intron 50.0%
CTAAGCCTTTCCCGCTAAGT+GGG - chr7_1:59277701-59277720 None:intergenic 50.0%
ACTAAGCCTTTCCCGCTAAG+TGG - chr7_1:59277702-59277721 None:intergenic 50.0%
AAGACAGTTCAGCAATGGCC+GGG + chr7_1:59278436-59278455 Msa1027050:CDS 50.0%
CTTCAAACTTCTGCTGACCC+CGG - chr7_1:59278457-59278476 None:intergenic 50.0%
CAGCAGAAGTTTGAAGACGG+TGG + chr7_1:59278461-59278480 Msa1027050:CDS 50.0%
CATGGAGCAGTAAACTGACC+GGG + chr7_1:59278837-59278856 Msa1027050:intron 50.0%
AGTAAGCTGCATTCATCGCG+AGG - chr7_1:59279215-59279234 None:intergenic 50.0%
ACTTGCTTCTACTGGGTCCA+AGG + chr7_1:59279310-59279329 Msa1027050:intron 50.0%
ACATCAGAATGGGGGATGTG+CGG + chr7_1:59279466-59279485 Msa1027050:intron 50.0%
CTGGAACAGCAAGCATGAGT+AGG - chr7_1:59279861-59279880 None:intergenic 50.0%
TGAGAAACAAGGTGCGTGCT+TGG - chr7_1:59280114-59280133 None:intergenic 50.0%
AGCAACCTCCAGTTGCATCT+TGG - chr7_1:59280279-59280298 None:intergenic 50.0%
TTGAGGCTCCCAGCAATGTA+TGG - chr7_1:59280353-59280372 None:intergenic 50.0%
GGGCTGTCCTTTGATAGATG+GGG + chr7_1:59280378-59280397 Msa1027050:intron 50.0%
!! GGGTTCTTGGTAATGCCTTC+AGG + chr7_1:59280398-59280417 Msa1027050:intron 50.0%
GGATGCTTGAGTAACCCTGA+AGG - chr7_1:59280416-59280435 None:intergenic 50.0%
! AGGAAGGAGTGCATGGTTGA+AGG + chr7_1:59280560-59280579 Msa1027050:intron 50.0%
CACTATAGCCACTGTTGGAG+AGG + chr7_1:59280736-59280755 Msa1027050:intron 50.0%
TAGCCACTGTTGGAGAGGAA+TGG + chr7_1:59280741-59280760 Msa1027050:intron 50.0%
TATGGTCAGGCAGACTCAAG+AGG - chr7_1:59280783-59280802 None:intergenic 50.0%
TATAGATCCTGAGGCTTGCC+AGG + chr7_1:59281041-59281060 Msa1027050:intron 50.0%
ATAGATCCTGAGGCTTGCCA+GGG + chr7_1:59281042-59281061 Msa1027050:intron 50.0%
ACGTTTGCAACCTGACTGTC+TGG - chr7_1:59281105-59281124 None:intergenic 50.0%
! TGGCTTTGCAGTGCAACTAG+GGG + chr7_1:59281667-59281686 Msa1027050:intron 50.0%
TGTGCTAGCATGTCGCTATG+TGG + chr7_1:59281732-59281751 Msa1027050:CDS 50.0%
AGCATGTCGCTATGTGGATG+AGG + chr7_1:59281738-59281757 Msa1027050:CDS 50.0%
GATGCCCAAGCTAATGGGAA+CGG - chr7_1:59282475-59282494 None:intergenic 50.0%
!! CGGTGTTGGCTATACAGTGT+CGG + chr7_1:59282824-59282843 Msa1027050:intron 50.0%
!! AGAGTCTTGGCTTGGTACAC+AGG - chr7_1:59282904-59282923 None:intergenic 50.0%
GAGATCGTTGTGACTGGAGT+TGG + chr7_1:59283365-59283384 Msa1027050:intron 50.0%
ACGGGAACAAGCAGGAAAGA+GGG - chr7_1:59283703-59283722 None:intergenic 50.0%
! GAGTTTTCCCTTGTGGAGTG+TGG + chr7_1:59283886-59283905 Msa1027050:intron 50.0%
GTTGTGTGGCAAGCTGTGAT+TGG + chr7_1:59284178-59284197 Msa1027050:intron 50.0%
! GGCAAGCTGTGATTGGTTGT+CGG + chr7_1:59284185-59284204 Msa1027050:intron 50.0%
! GCAAAGGAGGTGCAACCTAA+TGG - chr7_1:59284346-59284365 None:intergenic 50.0%
TCATGCACATGGTGCAAAGG+AGG - chr7_1:59284359-59284378 None:intergenic 50.0%
GCTTCATGCACATGGTGCAA+AGG - chr7_1:59284362-59284381 None:intergenic 50.0%
TGCACCATGTGCATGAAGCT+TGG + chr7_1:59284363-59284382 Msa1027050:intron 50.0%
! AGGAGTGTGTGAAATCCTGG+TGG - chr7_1:59284619-59284638 None:intergenic 50.0%
TTCAGCCATGAGCACGAGTT+AGG + chr7_1:59284711-59284730 Msa1027050:three_prime_UTR 50.0%
!! CTTCTGGGCCATTTGGGTTG+TGG + chr7_1:59276802-59276821 Msa1027050:CDS 55.0%
TTGCGTCAAGCTCGTGCTCT+TGG + chr7_1:59276915-59276934 Msa1027050:CDS 55.0%
CCTTTCCCGCTAAGTGGGAA+TGG - chr7_1:59277696-59277715 None:intergenic 55.0%
CCATTCCCACTTAGCGGGAA+AGG + chr7_1:59277693-59277712 Msa1027050:intron 55.0%
AGACAGTTCAGCAATGGCCG+GGG + chr7_1:59278437-59278456 Msa1027050:CDS 55.0%
!! GACGGTGGTGTTGTTGCTAG+TGG + chr7_1:59278476-59278495 Msa1027050:CDS 55.0%
GTAAACTGACCGGGAAGCCT+AGG + chr7_1:59278846-59278865 Msa1027050:intron 55.0%
TTCCTAAGGCCTAGGCTTCC+CGG - chr7_1:59278858-59278877 None:intergenic 55.0%
GGAGGGTTGAGTAGCTCAAC+TGG - chr7_1:59278958-59278977 None:intergenic 55.0%
!! TGCTTGCTGTTCCAGAGTCC+AGG + chr7_1:59279866-59279885 Msa1027050:intron 55.0%
AGAGTCCAGGACCTGATGCA+CGG + chr7_1:59279879-59279898 Msa1027050:intron 55.0%
ACAATCCGTGCATCAGGTCC+TGG - chr7_1:59279887-59279906 None:intergenic 55.0%
AGGGTAGGCCAAGATGCAAC+TGG + chr7_1:59280268-59280287 Msa1027050:intron 55.0%
GTAGGCCAAGATGCAACTGG+AGG + chr7_1:59280271-59280290 Msa1027050:intron 55.0%
TACACACGGACCAGACAGTC+AGG + chr7_1:59281092-59281111 Msa1027050:CDS 55.0%
!! TGCACCATGGGAAGTGTCCA+AGG + chr7_1:59281771-59281790 Msa1027050:CDS 55.0%
CACGGGAACAAGCAGGAAAG+AGG - chr7_1:59283704-59283723 None:intergenic 55.0%
AGCAACACACGGGAACAAGC+AGG - chr7_1:59283711-59283730 None:intergenic 55.0%
TGCTTGTTCCCGTGTGTTGC+TGG + chr7_1:59283710-59283729 Msa1027050:intron 55.0%
GAGAGCAAGACTCACGTGTC+TGG + chr7_1:59284546-59284565 Msa1027050:CDS 55.0%
TAATGCGGCGGTGAAGTGGG+TGG + chr7_1:59276734-59276753 Msa1027050:CDS 60.0%
GTGCATCAGGTCCTGGACTC+TGG - chr7_1:59279880-59279899 None:intergenic 60.0%
AACATTGGGGGGTCACCACC+AGG + chr7_1:59284601-59284620 Msa1027050:three_prime_UTR 60.0%
CGAGGCCTAACTCGTGCTCA+TGG - chr7_1:59284719-59284738 None:intergenic 60.0%
TGAGCACGAGTTAGGCCTCG+TGG + chr7_1:59284719-59284738 Msa1027050:three_prime_UTR 60.0%
! AATCAGAGGCGCGAACCACG+AGG - chr7_1:59284737-59284756 None:intergenic 60.0%
GACCGGGAAGCCTAGGCCTT+AGG + chr7_1:59278853-59278872 Msa1027050:intron 65.0%
CACGATCCCTGGCAAGCCTC+AGG - chr7_1:59281051-59281070 None:intergenic 65.0%
CTGAGGCTTGCCAGGGATCG+TGG + chr7_1:59281049-59281068 Msa1027050:CDS 65.0%
GCGGCGGTGAAGTGGGTGGT+CGG + chr7_1:59276738-59276757 Msa1027050:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 59276461 59284993 59276461 ID=Msa1027050;Name=Msa1027050
chr7_1 mRNA 59276461 59284993 59276461 ID=Msa1027050-mRNA-1;Parent=Msa1027050;Name=Msa1027050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=235|1|1|1|1|1|9|418|422
chr7_1 exon 59276461 59277018 59276461 ID=Msa1027050-mRNA-1:exon:12001;Parent=Msa1027050-mRNA-1
chr7_1 exon 59277929 59278164 59277929 ID=Msa1027050-mRNA-1:exon:12002;Parent=Msa1027050-mRNA-1
chr7_1 exon 59278372 59278559 59278372 ID=Msa1027050-mRNA-1:exon:12003;Parent=Msa1027050-mRNA-1
chr7_1 exon 59279881 59279952 59279881 ID=Msa1027050-mRNA-1:exon:12004;Parent=Msa1027050-mRNA-1
chr7_1 exon 59281046 59281113 59281046 ID=Msa1027050-mRNA-1:exon:12005;Parent=Msa1027050-mRNA-1
chr7_1 exon 59281678 59281798 59281678 ID=Msa1027050-mRNA-1:exon:12006;Parent=Msa1027050-mRNA-1
chr7_1 exon 59282273 59282338 59282273 ID=Msa1027050-mRNA-1:exon:12007;Parent=Msa1027050-mRNA-1
chr7_1 exon 59282453 59282575 59282453 ID=Msa1027050-mRNA-1:exon:12008;Parent=Msa1027050-mRNA-1
chr7_1 exon 59284504 59284993 59284504 ID=Msa1027050-mRNA-1:exon:12009;Parent=Msa1027050-mRNA-1
chr7_1 five_prime_UTR 59276461 59276695 59276461 ID=Msa1027050-mRNA-1:five_prime_utr;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59276696 59277018 59276696 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59277929 59278164 59277929 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59278372 59278559 59278372 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59279881 59279952 59279881 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59281046 59281113 59281046 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59281678 59281798 59281678 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59282273 59282338 59282273 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59282453 59282575 59282453 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 CDS 59284504 59284575 59284504 ID=Msa1027050-mRNA-1:cds;Parent=Msa1027050-mRNA-1
chr7_1 three_prime_UTR 59284576 59284993 59284576 ID=Msa1027050-mRNA-1:three_prime_utr;Parent=Msa1027050-mRNA-1
Gene Sequence

>Msa1027050

ATGAACAAAATGGGGGGTATCACTAGCAGTGTTGAATCTAATGCGGCGGTGAAGTGGGTGGTCGGAGTTATCATCGTTGGTGTATCAGTATTAGGTTTTTATTCATCTTCTGGGCCATTTGGGTTGTGGAAAAAGAATGGTAGAAGAAGGAATAAAAAACCGATTCGTGTTTATATGGATGGTTGTTTTGATATGATGCATTATGGTCATTGTAATGCTTTGCGTCAAGCTCGTGCTCTTGGTGATCAATTGATTGTTGGTGTTGTTAGTGATGATGAAATTATTGCTAATAAGGGTCCTCCTGTTACCCCTTTACATGAAAGGTTGATTATGGTGAATGCTGTGAAATGGGTTGATGAGGTTATTCCTGAAGCTCCATATGCCATTACTGAGGAATTCATGAAGAAGCTTTTCGATGAGTATAATATAGATTACATTATTCATGGGGATGATCCTTGTGTTCTACCTGATGGAACTGATGCTTATGCTCATGCCAAAAAGGCTGGCCGTTATAAACAGATAAAGCGCACGGAAGGAGTTTCCAGCACTGATATTGTTGGTCGAATGCTTCTCTGTGTAAGAGAAAGGAATATTGCCGACACTCATAATCATTCTTCTTTACAAAGACAGTTCAGCAATGGCCGGGGTCAGCAGAAGTTTGAAGACGGTGGTGTTGTTGCTAGTGGAACCCGTGTATCTCATTTTCTGCCTACATCTCGTAGAATTGTTCAGTTCTCAAACGGGAGGAGTCCAGGACCTGATGCACGGATTGTATATATAGATGGCGCTTTTGATCTCTTTCATGCTGGACATGTAGAGATCCTGAGGCTTGCCAGGGATCGTGGAGATTTTCTTCTTGTTGGAATACACACGGACCAGACAGTCAGTGCAACTAGGGGATTGCATCGTCCCATCATGAGCCTTCATGAAAGAAGTCTAAGTGTGCTAGCATGTCGCTATGTGGATGAGGTTATAATTGGTGCACCATGGGAAGTGTCCAAGGATATGATCACAACATTTAACATCTCATTAGTTGTTCATGGAACAACTGCAGAGAATACTGATTTTCAGAAGGAACAATCAAATCCATATGCCGTTCCCATTAGCTTGGGCATCTTCCAAATTTTAGATAGTCCTTTAGATATAACAACTACTACAATAATTAGGAGGATTGTATCAAATCACGAGGCATACCAGAAACGCAATGAGAAGAAGGGTGAAAGTGAGAAAAAATACTATGAGAGCAAGACTCACGTGTCTGGAGACTGA

Protein sequence

>Msa1027050

MNKMGGITSSVESNAAVKWVVGVIIVGVSVLGFYSSSGPFGLWKKNGRRRNKKPIRVYMDGCFDMMHYGHCNALRQARALGDQLIVGVVSDDEIIANKGPPVTPLHERLIMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYNIDYIIHGDDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERNIADTHNHSSLQRQFSNGRGQQKFEDGGVVASGTRVSHFLPTSRRIVQFSNGRSPGPDARIVYIDGAFDLFHAGHVEILRLARDRGDFLLVGIHTDQTVSATRGLHRPIMSLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTTAENTDFQKEQSNPYAVPISLGIFQILDSPLDITTTTIIRRIVSNHEAYQKRNEKKGESEKKYYESKTHVSGD*