Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1027730 | XP_003623876.2 | 95.612 | 547 | 14 | 2 | 1 | 537 | 1 | 547 | 0.0 | 1067 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1027730 | sp|Q43088|RBCMT_PEA | 27.027 | 296 | 167 | 10 | 8 | 300 | 54 | 303 | 2.74e-13 | 75.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1027730 | G7L2K0 | 95.612 | 547 | 14 | 2 | 1 | 537 | 1 | 547 | 0.0 | 1067 |
Gene ID | Type | Classification |
---|---|---|
Msa1027730 | TR | SET |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0898500 | Msa1027730 | 0.820421 | 6.920828e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1027730 | MtrunA17_Chr7g0246961 | 95.612 | 547 | 14 | 2 | 1 | 537 | 1 | 547 | 0.0 | 1067 |
Msa1027730 | MtrunA17_Chr4g0042701 | 28.302 | 318 | 162 | 12 | 2 | 308 | 49 | 311 | 4.83e-15 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1027730 | AT1G01920.2 | 61.818 | 550 | 187 | 7 | 1 | 533 | 3 | 546 | 0.0 | 677 |
Msa1027730 | AT1G01920.1 | 59.826 | 575 | 183 | 9 | 1 | 533 | 3 | 571 | 0.0 | 664 |
Msa1027730 | AT1G01920.5 | 61.538 | 507 | 177 | 6 | 1 | 490 | 3 | 508 | 0.0 | 620 |
Msa1027730 | AT1G01920.4 | 61.677 | 501 | 171 | 6 | 48 | 533 | 8 | 502 | 0.0 | 618 |
Msa1027730 | AT1G01920.3 | 63.869 | 429 | 137 | 6 | 5 | 416 | 7 | 434 | 0.0 | 548 |
Msa1027730 | AT1G14030.1 | 25.566 | 309 | 154 | 12 | 8 | 300 | 49 | 297 | 6.21e-11 | 65.1 |
Find 113 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCACTGCATTTAAGGTTAA+TGG | 0.142609 | 7_1:-60286227 | Msa1027730:intron |
CTAGGGCAAATTCAGTATTT+TGG | 0.177551 | 7_1:-60289337 | Msa1027730:intron |
CTCATTGTCAATTCAGTTCT+TGG | 0.200060 | 7_1:-60285747 | Msa1027730:three_prime_UTR |
GTCTCTATGTATCTTCTTTC+CGG | 0.208032 | 7_1:-60288526 | Msa1027730:intron |
TCCATTATCTAGCAGAGTTT+TGG | 0.240722 | 7_1:+60287236 | None:intergenic |
GATATGCTTCCAACCACTTT+TGG | 0.251963 | 7_1:-60290752 | Msa1027730:CDS |
TGGGAGGTTTGCGGTGATTC+TGG | 0.254285 | 7_1:-60286538 | Msa1027730:CDS |
TCCCTTGTTGCCATAACTAA+TGG | 0.277594 | 7_1:+60288292 | None:intergenic |
CATACTGTTTGCTATCTTCC+TGG | 0.278315 | 7_1:+60286134 | None:intergenic |
CCCAAAACTCTGCTAGATAA+TGG | 0.281902 | 7_1:-60287237 | Msa1027730:CDS |
AAAGTTTCGAGCTTTGCTTC+TGG | 0.300512 | 7_1:+60291868 | None:intergenic |
TCAACTTCCCATGTTGCTAT+TGG | 0.310003 | 7_1:+60288577 | None:intergenic |
GATAATTGTCTCTCCCCTTC+AGG | 0.314552 | 7_1:+60286586 | None:intergenic |
TATAATTCTTATACTCTATT+CGG | 0.319903 | 7_1:-60285642 | Msa1027730:three_prime_UTR |
CGAGAAATTTCCATTAGTTA+TGG | 0.330983 | 7_1:-60288302 | Msa1027730:CDS |
ATGGACCTTGAAGAGCATTC+TGG | 0.342337 | 7_1:-60286208 | Msa1027730:CDS |
CTGTTCCAGAATGCTCTTCA+AGG | 0.349550 | 7_1:+60286203 | None:intergenic |
AAGTTTCGAGCTTTGCTTCT+GGG | 0.351126 | 7_1:+60291869 | None:intergenic |
CTGTATGGTTTCGTCATTGA+TGG | 0.361585 | 7_1:-60287633 | Msa1027730:CDS |
TTCTGTCACATGAAGCTTGT+TGG | 0.362729 | 7_1:-60286610 | Msa1027730:intron |
ATATCGTGCAACTGAATTAC+AGG | 0.370351 | 7_1:-60290675 | Msa1027730:intron |
CAGTGCAAGGAGACACTGTT+TGG | 0.372176 | 7_1:-60288994 | Msa1027730:CDS |
TAGATGTCCAGTCAGCAATA+TGG | 0.372524 | 7_1:-60286558 | Msa1027730:CDS |
TGATTGCTTCTGAAGGATAA+TGG | 0.373461 | 7_1:+60287474 | None:intergenic |
ACAAAGTTTGCAACTATAGT+TGG | 0.373492 | 7_1:-60287167 | Msa1027730:CDS |
TGTGCTGTGTGTGGTTTCCT+TGG | 0.380688 | 7_1:+60289015 | None:intergenic |
GGAGACACTGTTTGGGTTGA+GGG | 0.388987 | 7_1:-60288986 | Msa1027730:CDS |
AACTTTCTTGCAGTGGCTAC+AGG | 0.393679 | 7_1:-60291851 | Msa1027730:intron |
TGGGTTGAGGGTCTTGTCCC+TGG | 0.398663 | 7_1:-60288974 | Msa1027730:CDS |
TGATGAACATCTTGCATCTC+AGG | 0.399499 | 7_1:+60289272 | None:intergenic |
AAGTACTGTGATTCCAGAAA+AGG | 0.405051 | 7_1:-60291660 | Msa1027730:CDS |
CTTCCTGGCTATCAATGATA+AGG | 0.405078 | 7_1:+60286149 | None:intergenic |
GGATCTTGCAATACCCTCAT+TGG | 0.414764 | 7_1:+60290978 | None:intergenic |
CCAAAGTGTATTTCCAAAAG+TGG | 0.431664 | 7_1:+60290739 | None:intergenic |
CAGGAACTTCTATATCTGTA+TGG | 0.433043 | 7_1:-60287648 | Msa1027730:CDS |
AGGAGACACTGTTTGGGTTG+AGG | 0.441525 | 7_1:-60288987 | Msa1027730:CDS |
TAGTTTCATACAAATTCAAC+AGG | 0.442700 | 7_1:+60289942 | None:intergenic |
AGATGTCCAGTCAGCAATAT+GGG | 0.462315 | 7_1:-60286557 | Msa1027730:CDS |
GGCCCTTATCATTGATAGCC+AGG | 0.463013 | 7_1:-60286152 | Msa1027730:CDS |
GTTTGCGCAAGGATTCTCTA+TGG | 0.464632 | 7_1:-60290872 | Msa1027730:CDS |
ACAAGCTTGTCTACATAAGA+TGG | 0.465464 | 7_1:+60287126 | None:intergenic |
GATGGAACTGGCTTAACAAC+AGG | 0.466483 | 7_1:-60288556 | Msa1027730:CDS |
TTCCTGGCTATCAATGATAA+GGG | 0.467148 | 7_1:+60286150 | None:intergenic |
ACATGGGAAGTTGATGGAAC+TGG | 0.472230 | 7_1:-60288568 | Msa1027730:CDS |
CTCATCCTCTTGCATGGCTA+TGG | 0.472389 | 7_1:+60287071 | None:intergenic |
ACAATGTGACATGGTTATCA+AGG | 0.476735 | 7_1:+60285815 | None:intergenic |
TGTGATTCCAGAAAAGGGTT+TGG | 0.479557 | 7_1:-60291654 | Msa1027730:CDS |
ATGAAGCTTGTTGGACCTGA+AGG | 0.484251 | 7_1:-60286601 | Msa1027730:intron |
TCAAACAATGCTCTACATTC+CGG | 0.484562 | 7_1:+60290945 | None:intergenic |
CTACATTCCGGTCCTAGAAA+AGG | 0.484582 | 7_1:+60290957 | None:intergenic |
AGTACTGTGATTCCAGAAAA+GGG | 0.485791 | 7_1:-60291659 | Msa1027730:CDS |
AGTGTATTTCCAAAAGTGGT+TGG | 0.489103 | 7_1:+60290743 | None:intergenic |
AAGGTAGCCATAAATTTCTC+AGG | 0.491005 | 7_1:+60287099 | None:intergenic |
ATAGCAACATGGGAAGTTGA+TGG | 0.495904 | 7_1:-60288574 | Msa1027730:CDS |
TGACTTTGAATTGCTCAAGA+AGG | 0.498742 | 7_1:-60286173 | Msa1027730:CDS |
AAGCCAGCTTCTTGAAGTGC+AGG | 0.498998 | 7_1:-60287426 | Msa1027730:intron |
ACCACACACAGCACAGTGCA+AGG | 0.499409 | 7_1:-60289007 | Msa1027730:CDS |
TACACTTTGGTTTAGTGAAG+AGG | 0.503980 | 7_1:-60290726 | Msa1027730:CDS |
GAATGTAGAGCATTGTTTGA+AGG | 0.509677 | 7_1:-60290942 | Msa1027730:CDS |
TCTAACTTGGACTAAAGATC+AGG | 0.510257 | 7_1:+60285776 | None:intergenic |
AGTGCAAGGAGACACTGTTT+GGG | 0.515525 | 7_1:-60288993 | Msa1027730:CDS |
TGATTGCAAAAGTCAATGCC+AGG | 0.518483 | 7_1:+60288956 | None:intergenic |
GGAGTAATTGATAATTCTAG+TGG | 0.523042 | 7_1:+60290999 | None:intergenic |
CATTGATGTCTAGAAACAAA+TGG | 0.527412 | 7_1:-60285940 | Msa1027730:CDS |
TCCATTAGTTATGGCAACAA+GGG | 0.530233 | 7_1:-60288293 | Msa1027730:CDS |
TTGCATGGCTATGGTTCTCA+AGG | 0.534689 | 7_1:+60287080 | None:intergenic |
AGTTTACATGATTATTCGAA+GGG | 0.537196 | 7_1:-60285723 | Msa1027730:three_prime_UTR |
AGCTCGAAACTTTCTTGCAG+TGG | 0.538099 | 7_1:-60291858 | Msa1027730:CDS |
GACAGTGGAGCGTTTGCGCA+AGG | 0.539091 | 7_1:-60290883 | Msa1027730:CDS |
ATACCTGCACTTCAAGAAGC+TGG | 0.540029 | 7_1:+60287423 | None:intergenic |
TTCCATTAGTTATGGCAACA+AGG | 0.540060 | 7_1:-60288294 | Msa1027730:CDS |
TGAAGAGCATTCTGGAACAG+AGG | 0.546626 | 7_1:-60286200 | Msa1027730:CDS |
TCCTTGCACTGTGCTGTGTG+TGG | 0.554281 | 7_1:+60289006 | None:intergenic |
ACTCCAAAAGCTGATGAAAA+CGG | 0.554851 | 7_1:-60289242 | Msa1027730:intron |
CAGTTTACATGATTATTCGA+AGG | 0.559107 | 7_1:-60285724 | Msa1027730:three_prime_UTR |
GAGGAACTTCAAGAGCTAAG+AGG | 0.559109 | 7_1:-60290707 | Msa1027730:CDS |
TTGAATTCAGGCAAATGGGG+TGG | 0.561077 | 7_1:-60291703 | Msa1027730:intron |
CGCAAATCAAGAGGTAGCAA+TGG | 0.561397 | 7_1:-60291896 | Msa1027730:exon |
AAGTGGTTGGAAGCATATCA+AGG | 0.561594 | 7_1:+60290756 | None:intergenic |
TGAAGCTTGTTGGACCTGAA+GGG | 0.564184 | 7_1:-60286600 | Msa1027730:intron |
TTATGGCAACAAGGGAAATG+AGG | 0.564716 | 7_1:-60288285 | Msa1027730:intron |
ATAGTATTGATTGCTTCTGA+AGG | 0.567549 | 7_1:+60287467 | None:intergenic |
TTGAAGGAGATGTAGATGAC+AGG | 0.571307 | 7_1:-60290926 | Msa1027730:CDS |
TCAGCAATATGGGAGGTTTG+CGG | 0.572266 | 7_1:-60286547 | Msa1027730:CDS |
ATTATCAATTACTCCAATGA+GGG | 0.574443 | 7_1:-60290991 | Msa1027730:CDS |
TTTGTATGAAACTAAAGTGA+AGG | 0.575323 | 7_1:-60289933 | Msa1027730:CDS |
ATCTGAAGCCAATAGCAACA+TGG | 0.576295 | 7_1:-60288585 | Msa1027730:CDS |
GAAAGAAGATACATAGAGAC+GGG | 0.578087 | 7_1:+60288529 | None:intergenic |
AATGATGTTGTTATTGACAG+TGG | 0.579816 | 7_1:-60290898 | Msa1027730:CDS |
TCAGGAAATACATAAGAACT+AGG | 0.580619 | 7_1:+60289290 | None:intergenic |
AATACATAAGAACTAGGCAA+TGG | 0.581027 | 7_1:+60289296 | None:intergenic |
TGTGATAAAGATGTTTCTGA+TGG | 0.581741 | 7_1:-60291624 | Msa1027730:intron |
GAAGCTTGTTGGACCTGAAG+GGG | 0.592425 | 7_1:-60286599 | Msa1027730:intron |
GAAAAGCTCATCCTCTTGCA+TGG | 0.596233 | 7_1:+60287065 | None:intergenic |
GTTTGCAACTATAGTTGGAG+TGG | 0.596685 | 7_1:-60287162 | Msa1027730:CDS |
AAACCTCCCATATTGCTGAC+TGG | 0.603393 | 7_1:+60286551 | None:intergenic |
TCTGAAGCCAATAGCAACAT+GGG | 0.609278 | 7_1:-60288584 | Msa1027730:CDS |
AATTATCAATTACTCCAATG+AGG | 0.609295 | 7_1:-60290992 | Msa1027730:CDS |
ATTTCTCGATCAATCTGCAA+GGG | 0.618905 | 7_1:+60288317 | None:intergenic |
AATTTCTCGATCAATCTGCA+AGG | 0.619449 | 7_1:+60288316 | None:intergenic |
CAAAGTAGGCGCAAATCAAG+AGG | 0.619679 | 7_1:-60291905 | Msa1027730:five_prime_UTR |
GAGAACCATAGCCATGCAAG+AGG | 0.619836 | 7_1:-60287076 | Msa1027730:CDS |
GGAAAGAAGATACATAGAGA+CGG | 0.629227 | 7_1:+60288528 | None:intergenic |
GCAATGGAGTGTTCAAAGCA+CGG | 0.636367 | 7_1:+60289312 | None:intergenic |
CAGAATGGTAAATGACTCAG+AGG | 0.637679 | 7_1:-60285969 | Msa1027730:CDS |
GGTTTCGTCAATGCTAGAAG+AGG | 0.649846 | 7_1:-60287040 | Msa1027730:intron |
GATTGCAAAAGTCAATGCCA+GGG | 0.652587 | 7_1:+60288957 | None:intergenic |
TAACACAGATGACTACCTCA+TGG | 0.656026 | 7_1:-60287610 | Msa1027730:intron |
AAGAACTTTACAATGTGACA+TGG | 0.672070 | 7_1:+60285806 | None:intergenic |
AAAATCTGACGATCTAACCA+AGG | 0.681796 | 7_1:-60289032 | Msa1027730:CDS |
GCAAATGGGGTGGAGCTACG+AGG | 0.694142 | 7_1:-60291693 | Msa1027730:CDS |
TCTGCTATTGTATATAGACG+AGG | 0.714826 | 7_1:-60285917 | Msa1027730:CDS |
TGTCCAGTCAGCAATATGGG+AGG | 0.717026 | 7_1:-60286554 | Msa1027730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTATTTTATTTTACTTTA+TGG | - | chr7_1:60286761-60286780 | Msa1027730:intron | 10.0% |
!!! | AGAATGTTTTTTAAAATTTT+GGG | + | chr7_1:60287077-60287096 | None:intergenic | 10.0% |
!!! | AAGAATGTTTTTTAAAATTT+TGG | + | chr7_1:60287078-60287097 | None:intergenic | 10.0% |
!! | TTAAAATTGATATTAAAGTA+AGG | - | chr7_1:60288514-60288533 | Msa1027730:intron | 10.0% |
!!! | TCATATAAAAAGTATATAAA+GGG | + | chr7_1:60288762-60288781 | None:intergenic | 10.0% |
!!! | ATCATATAAAAAGTATATAA+AGG | + | chr7_1:60288763-60288782 | None:intergenic | 10.0% |
!! | TACTTTGACAATAAAAAAAA+TGG | + | chr7_1:60285678-60285697 | None:intergenic | 15.0% |
!!! | ATTTTTTTTATTGTCAAAGT+AGG | - | chr7_1:60285677-60285696 | Msa1027730:three_prime_UTR | 15.0% |
!!! | AAAATTGTTTTCAAAAAGTA+AGG | + | chr7_1:60286481-60286500 | None:intergenic | 15.0% |
!!! | TTTGTTTTTCTTTGAAAAAA+AGG | - | chr7_1:60286558-60286577 | Msa1027730:CDS | 15.0% |
!!! | TTGTTTTTCTTTGAAAAAAA+GGG | - | chr7_1:60286559-60286578 | Msa1027730:CDS | 15.0% |
!! | AATAAAATAAACCATACATA+CGG | + | chr7_1:60286753-60286772 | None:intergenic | 15.0% |
!!! | AAATTAACTATTTTTACTCA+AGG | + | chr7_1:60287150-60287169 | None:intergenic | 15.0% |
!!! | TTTTTAAGTTTATACATTCA+AGG | - | chr7_1:60287998-60288017 | Msa1027730:intron | 15.0% |
!! | AAAAATCAGTGAAATATAAA+CGG | + | chr7_1:60288490-60288509 | None:intergenic | 15.0% |
!!! | CATATAAAAAGTATATAAAG+GGG | + | chr7_1:60288761-60288780 | None:intergenic | 15.0% |
!! | ATTAATGACCAATATTTATA+AGG | + | chr7_1:60288812-60288831 | None:intergenic | 15.0% |
!!! | TTTCTTACTTAATTTCATTT+TGG | - | chr7_1:60289158-60289177 | Msa1027730:intron | 15.0% |
!! | AAGAAAAACAATGAATTAAA+GGG | + | chr7_1:60289238-60289257 | None:intergenic | 15.0% |
!! | AATATATATATTTGATGTAC+AGG | + | chr7_1:60289540-60289559 | None:intergenic | 15.0% |
!!! | TTAGACACTAAATATATTTT+AGG | + | chr7_1:60291188-60291207 | None:intergenic | 15.0% |
!! | TATAATTCTTATACTCTATT+CGG | - | chr7_1:60291954-60291973 | Msa1027730:five_prime_UTR | 15.0% |
!!! | CATAGTTTTGAATTTTGATT+TGG | - | chr7_1:60285868-60285887 | Msa1027730:CDS | 20.0% |
!! | TGTACTAATATCAATATGAA+TGG | - | chr7_1:60286001-60286020 | Msa1027730:intron | 20.0% |
!!! | TTTTCATAAGCTCAAAAATA+AGG | - | chr7_1:60286258-60286277 | Msa1027730:intron | 20.0% |
!! | TTAAATTAGCAATAAAACAC+AGG | + | chr7_1:60286999-60287018 | None:intergenic | 20.0% |
!!! | GAGTAAAAATAGTTAATTTG+AGG | - | chr7_1:60287151-60287170 | Msa1027730:CDS | 20.0% |
!!! | TAAAAATAGTTAATTTGAGG+CGG | - | chr7_1:60287154-60287173 | Msa1027730:CDS | 20.0% |
!! | AGATTTATATTAGAAAACCT+AGG | + | chr7_1:60287462-60287481 | None:intergenic | 20.0% |
!!! | TTTTCTAATATAAATCTCCA+TGG | - | chr7_1:60287465-60287484 | Msa1027730:CDS | 20.0% |
!!! | TTCTAGTTTATGTTTTTAAG+TGG | - | chr7_1:60287765-60287784 | Msa1027730:intron | 20.0% |
!!! | CGTTTGATTTAAATATTGTT+AGG | - | chr7_1:60287834-60287853 | Msa1027730:intron | 20.0% |
!! | TTATGTCAATCATGTTAATT+TGG | - | chr7_1:60287858-60287877 | Msa1027730:intron | 20.0% |
!! | TAGTATATTTAGTGCAATAA+TGG | + | chr7_1:60287958-60287977 | None:intergenic | 20.0% |
!! | ACTAAACACCTTATAAATAT+TGG | - | chr7_1:60288801-60288820 | Msa1027730:intron | 20.0% |
!!! | ATTTTATGAAACTACCTAAA+TGG | + | chr7_1:60289195-60289214 | None:intergenic | 20.0% |
!! | AGAAAAACAATGAATTAAAG+GGG | + | chr7_1:60289237-60289256 | None:intergenic | 20.0% |
!! | CAAGAAAAACAATGAATTAA+AGG | + | chr7_1:60289239-60289258 | None:intergenic | 20.0% |
!!! | CTTTAATTCATTGTTTTTCT+TGG | - | chr7_1:60289237-60289256 | Msa1027730:intron | 20.0% |
!! | TCATATCATATCATGTAAAT+AGG | + | chr7_1:60289508-60289527 | None:intergenic | 20.0% |
!!! | TTAGGTATAAATTTTAGTCT+TGG | + | chr7_1:60290039-60290058 | None:intergenic | 20.0% |
!! | TAAAGCTGAAGATAAATTAT+TGG | + | chr7_1:60290200-60290219 | None:intergenic | 20.0% |
!!! | AAATTCACTTTCTGTTATTT+TGG | - | chr7_1:60290300-60290319 | Msa1027730:intron | 20.0% |
!!! | CTATGCAACATTTTTTTTAA+TGG | - | chr7_1:60290587-60290606 | Msa1027730:intron | 20.0% |
!!! | GATGTATTTTTTATGCTATT+TGG | - | chr7_1:60290710-60290729 | Msa1027730:CDS | 20.0% |
!! | TATTTCTTCAATAAGTGAAA+TGG | + | chr7_1:60291287-60291306 | None:intergenic | 20.0% |
!! | TTTCACTTATTGAAGAAATA+AGG | - | chr7_1:60291287-60291306 | Msa1027730:intron | 20.0% |
!! | AAAAGAGTTTTACATCATCA+CGG | - | chr7_1:60285584-60285603 | Msa1027730:three_prime_UTR | 25.0% |
!!! | AAAAAAATGGTGATGGTTTA+AGG | + | chr7_1:60285665-60285684 | None:intergenic | 25.0% |
! | GACAATAAAAAAAATGGTGA+TGG | + | chr7_1:60285672-60285691 | None:intergenic | 25.0% |
!! | TAACTCTGGTTTGTAATTTA+AGG | - | chr7_1:60285773-60285792 | Msa1027730:three_prime_UTR | 25.0% |
!!! | TTAGCTTTTATACCATTCTT+TGG | - | chr7_1:60285814-60285833 | Msa1027730:exon | 25.0% |
!!! | TTTGATTTGGTTTTGAATTC+AGG | - | chr7_1:60285881-60285900 | Msa1027730:CDS | 25.0% |
!!! | TGAATGGATTTTATTGTAGT+TGG | - | chr7_1:60286017-60286036 | Msa1027730:intron | 25.0% |
! | TAAGTTATCACTAACGAAAA+TGG | + | chr7_1:60286200-60286219 | None:intergenic | 25.0% |
!!! | TGACTTTTTTTTTGCTTCAT+TGG | + | chr7_1:60286414-60286433 | None:intergenic | 25.0% |
! | ATAGCAATAAACACTATTCA+GGG | + | chr7_1:60286506-60286525 | None:intergenic | 25.0% |
!! | TTCTCTGTTTTCAAAAAGTA+AGG | + | chr7_1:60286532-60286551 | None:intergenic | 25.0% |
! | AATTATCAATTACTCCAATG+AGG | - | chr7_1:60286604-60286623 | Msa1027730:intron | 25.0% |
! | ATTATCAATTACTCCAATGA+GGG | - | chr7_1:60286605-60286624 | Msa1027730:intron | 25.0% |
! | TATTGCTAATTTAAAGATGC+TGG | - | chr7_1:60287005-60287024 | Msa1027730:intron | 25.0% |
! | TTGTTATATAGAGTCAATTG+CGG | - | chr7_1:60287310-60287329 | Msa1027730:intron | 25.0% |
! | ATTACATAAAAGCTAAACCT+AGG | - | chr7_1:60287442-60287461 | Msa1027730:CDS | 25.0% |
!!! | AACAAATTTAGGCTGTTTTA+CGG | - | chr7_1:60287538-60287557 | Msa1027730:intron | 25.0% |
! | TCAAATACTGCTAAATACAA+TGG | + | chr7_1:60287607-60287626 | None:intergenic | 25.0% |
! | TAGTTTCATACAAATTCAAC+AGG | + | chr7_1:60287657-60287676 | None:intergenic | 25.0% |
! | TTTGTATGAAACTAAAGTGA+AGG | - | chr7_1:60287663-60287682 | Msa1027730:intron | 25.0% |
! | AACGATGTCAAAATTTCAAT+AGG | + | chr7_1:60287818-60287837 | None:intergenic | 25.0% |
!!! | CAATCATGTTAATTTGGTTT+TGG | - | chr7_1:60287864-60287883 | Msa1027730:intron | 25.0% |
! | GTTTCAATTTATAATCCTGA+AGG | + | chr7_1:60288043-60288062 | None:intergenic | 25.0% |
! | TTTCAAACATACATTTACGA+TGG | - | chr7_1:60288102-60288121 | Msa1027730:intron | 25.0% |
! | TCACAATCAATGAAAAAACA+AGG | + | chr7_1:60288726-60288745 | None:intergenic | 25.0% |
!! | ATTTATAAGGTGTTTAGTGA+AGG | + | chr7_1:60288799-60288818 | None:intergenic | 25.0% |
!! | CAGTGAATTCGATTTTATAT+AGG | - | chr7_1:60289441-60289460 | Msa1027730:intron | 25.0% |
!! | TTGATAGCATCATAACATAT+TGG | + | chr7_1:60289584-60289603 | None:intergenic | 25.0% |
! | ATTCAAATTGACTGAACAAA+AGG | - | chr7_1:60289686-60289705 | Msa1027730:intron | 25.0% |
! | AACAAAAGGTTTAATAGAAC+TGG | - | chr7_1:60289700-60289719 | Msa1027730:intron | 25.0% |
! | ACAGAAAGTGAATTTACAAA+AGG | + | chr7_1:60290295-60290314 | None:intergenic | 25.0% |
!!! | ATTTTGGTTTTGTTTACAGA+AGG | - | chr7_1:60290316-60290335 | Msa1027730:intron | 25.0% |
!! | TGTTTTTCCTGAGAAATTTA+TGG | - | chr7_1:60290490-60290509 | Msa1027730:intron | 25.0% |
! | TATAGTTGTTAAGTAATTCC+TGG | + | chr7_1:60291127-60291146 | None:intergenic | 25.0% |
! | GTGAAAATATGAAAGCAATT+AGG | + | chr7_1:60291354-60291373 | None:intergenic | 25.0% |
!! | TCATATTTTCACTGCATTTA+AGG | - | chr7_1:60291362-60291381 | Msa1027730:intron | 25.0% |
!! | AGAAATGCAAGTTTTACTTA+AGG | + | chr7_1:60291546-60291565 | None:intergenic | 25.0% |
! | CAAAGACATCAATATATTGT+AGG | + | chr7_1:60291579-60291598 | None:intergenic | 25.0% |
! | CTCAAAGGAAATTAAGAAAA+AGG | + | chr7_1:60291607-60291626 | None:intergenic | 25.0% |
! | CAATGAGTAAAAATCTAACT+TGG | + | chr7_1:60291836-60291855 | None:intergenic | 25.0% |
! | AGTTTACATGATTATTCGAA+GGG | - | chr7_1:60291873-60291892 | Msa1027730:CDS | 25.0% |
! | AACTTTCCACACTAAAAAAT+TGG | + | chr7_1:60291909-60291928 | None:intergenic | 25.0% |
!! | ATTTTCACCCCAATTTTTAA+GGG | + | chr7_1:60291984-60292003 | None:intergenic | 25.0% |
! | GTTTGTAATTTAAGGCCTAA+TGG | - | chr7_1:60285781-60285800 | Msa1027730:three_prime_UTR | 30.0% |
TTTGAAAACTCACCAAAGAA+TGG | + | chr7_1:60285829-60285848 | None:intergenic | 30.0% | |
! | TCTTTGGTGAGTTTTCAAAA+TGG | - | chr7_1:60285830-60285849 | Msa1027730:exon | 30.0% |
! | TGTGATAAAGATGTTTCTGA+TGG | - | chr7_1:60285972-60285991 | Msa1027730:intron | 30.0% |
CATAGCAATAAACACTATTC+AGG | + | chr7_1:60286507-60286526 | None:intergenic | 30.0% | |
TTGAAAAAAAGGGATTCTGT+TGG | - | chr7_1:60286569-60286588 | Msa1027730:CDS | 30.0% | |
! | GGAGTAATTGATAATTCTAG+TGG | + | chr7_1:60286600-60286619 | None:intergenic | 30.0% |
! | AATGATGTTGTTATTGACAG+TGG | - | chr7_1:60286698-60286717 | Msa1027730:intron | 30.0% |
TTGTAGTAAATAACGTATCG+TGG | + | chr7_1:60287286-60287305 | None:intergenic | 30.0% | |
! | GTTGACTCTATATAACATTC+TGG | + | chr7_1:60287422-60287441 | None:intergenic | 30.0% |
TATAAATCTCCATGGTGTAA+TGG | - | chr7_1:60287473-60287492 | Msa1027730:CDS | 30.0% | |
ATAAATCTCCATGGTGTAAT+GGG | - | chr7_1:60287474-60287493 | Msa1027730:CDS | 30.0% | |
!!! | ATGACTTTTTTGAACCTTTC+AGG | - | chr7_1:60287513-60287532 | Msa1027730:intron | 30.0% |
!! | ACAAATTTAGGCTGTTTTAC+GGG | - | chr7_1:60287539-60287558 | Msa1027730:intron | 30.0% |
! | GATAGAAAGAATGTCATTTC+TGG | - | chr7_1:60287568-60287587 | Msa1027730:intron | 30.0% |
!! | AAGAAACTTTTGACTCTTGA+CGG | - | chr7_1:60287694-60287713 | Msa1027730:intron | 30.0% |
!! | AGATTCTAAGATGTATGTGT+TGG | - | chr7_1:60287717-60287736 | Msa1027730:intron | 30.0% |
!! | GATTCTAAGATGTATGTGTT+GGG | - | chr7_1:60287718-60287737 | Msa1027730:intron | 30.0% |
AATACATAAGAACTAGGCAA+TGG | + | chr7_1:60288303-60288322 | None:intergenic | 30.0% | |
TCAGGAAATACATAAGAACT+AGG | + | chr7_1:60288309-60288328 | None:intergenic | 30.0% | |
AAGTAAGGAAGTTATATTGC+AGG | - | chr7_1:60288529-60288548 | Msa1027730:CDS | 30.0% | |
ATATCAGCTGTTTGATCATA+GGG | + | chr7_1:60288855-60288874 | None:intergenic | 30.0% | |
AATATCAGCTGTTTGATCAT+AGG | + | chr7_1:60288856-60288875 | None:intergenic | 30.0% | |
CATACATATACATGAATGTC+TGG | - | chr7_1:60288882-60288901 | Msa1027730:intron | 30.0% | |
ATTACCTTTCTTGCCATATA+CGG | - | chr7_1:60288921-60288940 | Msa1027730:intron | 30.0% | |
GTAAATCACATATTCTCATG+AGG | + | chr7_1:60288970-60288989 | None:intergenic | 30.0% | |
TGTGATTTACCTTGATTACA+TGG | - | chr7_1:60288980-60288999 | Msa1027730:CDS | 30.0% | |
! | ACATTCTTTTTGTGCGTTTT+TGG | - | chr7_1:60289095-60289114 | Msa1027730:intron | 30.0% |
CGAGAAATTTCCATTAGTTA+TGG | - | chr7_1:60289294-60289313 | Msa1027730:CDS | 30.0% | |
! | ATGAGGTACTTTATATTCTG+TGG | - | chr7_1:60289328-60289347 | Msa1027730:CDS | 30.0% |
ATGTTATGATGCTATCAAAG+AGG | - | chr7_1:60289586-60289605 | Msa1027730:intron | 30.0% | |
AGAACTGGATCCATAATTTA+CGG | - | chr7_1:60289715-60289734 | Msa1027730:intron | 30.0% | |
! | TTTTATTGGCCCGTAAATTA+TGG | + | chr7_1:60289728-60289747 | None:intergenic | 30.0% |
! | ATGCCTTGATGGAATTTTAT+TGG | + | chr7_1:60289742-60289761 | None:intergenic | 30.0% |
! | GCTTATTTCAAGTGTTAACA+TGG | - | chr7_1:60289902-60289921 | Msa1027730:CDS | 30.0% |
AGGAATGGAAGTAATATGTT+AGG | + | chr7_1:60290057-60290076 | None:intergenic | 30.0% | |
!! | ATAGTATTGATTGCTTCTGA+AGG | + | chr7_1:60290132-60290151 | None:intergenic | 30.0% |
GAAAGTGAATTTACAAAAGG+AGG | + | chr7_1:60290292-60290311 | None:intergenic | 30.0% | |
!!! | GATAATGGATTTTTTCCATC+AGG | - | chr7_1:60290374-60290393 | Msa1027730:intron | 30.0% |
!! | GTTATTTTCTCCACTGTTTT+TGG | + | chr7_1:60290402-60290421 | None:intergenic | 30.0% |
ACAAAGTTTGCAACTATAGT+TGG | - | chr7_1:60290429-60290448 | Msa1027730:intron | 30.0% | |
AGTAGACAAGTGATGAAAAA+GGG | + | chr7_1:60290684-60290703 | None:intergenic | 30.0% | |
TATTTGATTATGCCAGTAGA+TGG | - | chr7_1:60290777-60290796 | Msa1027730:intron | 30.0% | |
TTTCAAAGACAAAATAGACC+TGG | - | chr7_1:60290896-60290915 | Msa1027730:CDS | 30.0% | |
CAAATGAAAACATAATTGCC+AGG | + | chr7_1:60290917-60290936 | None:intergenic | 30.0% | |
! | CTGGCAATTATGTTTTCATT+TGG | - | chr7_1:60290915-60290934 | Msa1027730:CDS | 30.0% |
! | TTCACTGCATTTAAGGTTAA+TGG | - | chr7_1:60291369-60291388 | Msa1027730:intron | 30.0% |
TTAATTTCCTTTGAGCAGAA+TGG | - | chr7_1:60291612-60291631 | Msa1027730:intron | 30.0% | |
CATTGATGTCTAGAAACAAA+TGG | - | chr7_1:60291656-60291675 | Msa1027730:CDS | 30.0% | |
AAGAACTTTACAATGTGACA+TGG | + | chr7_1:60291793-60291812 | None:intergenic | 30.0% | |
CAGTTTACATGATTATTCGA+AGG | - | chr7_1:60291872-60291891 | Msa1027730:CDS | 30.0% | |
!!! | TTAGCTCCAATTTTTTAGTG+TGG | - | chr7_1:60291900-60291919 | Msa1027730:five_prime_UTR | 30.0% |
! | CATTTTCACCCCAATTTTTA+AGG | + | chr7_1:60291985-60292004 | None:intergenic | 30.0% |
! | GCTAAACACGTTTTACCATT+AGG | + | chr7_1:60285799-60285818 | None:intergenic | 35.0% |
!!! | TGGTTTTGAATTCAGGCAAA+TGG | - | chr7_1:60285888-60285907 | Msa1027730:CDS | 35.0% |
!!! | GGTTTTGAATTCAGGCAAAT+GGG | - | chr7_1:60285889-60285908 | Msa1027730:CDS | 35.0% |
!! | GTTTTGAATTCAGGCAAATG+GGG | - | chr7_1:60285890-60285909 | Msa1027730:CDS | 35.0% |
! | AAGTACTGTGATTCCAGAAA+AGG | - | chr7_1:60285936-60285955 | Msa1027730:CDS | 35.0% |
AGTACTGTGATTCCAGAAAA+GGG | - | chr7_1:60285937-60285956 | Msa1027730:CDS | 35.0% | |
! | AAATATGCCAAACCCTTTTC+TGG | + | chr7_1:60285952-60285971 | None:intergenic | 35.0% |
CAAAAATAAGGCAATCCGAA+CGG | - | chr7_1:60286270-60286289 | Msa1027730:intron | 35.0% | |
! | GTATTGCAAGATCCTTTTCT+AGG | - | chr7_1:60286627-60286646 | Msa1027730:intron | 35.0% |
TCAAACAATGCTCTACATTC+CGG | + | chr7_1:60286654-60286673 | None:intergenic | 35.0% | |
!! | GAATGTAGAGCATTGTTTGA+AGG | - | chr7_1:60286654-60286673 | Msa1027730:intron | 35.0% |
TTCAGAACTTCAGATTGTGT+TGG | - | chr7_1:60286784-60286803 | Msa1027730:intron | 35.0% | |
TCAGAACTTCAGATTGTGTT+GGG | - | chr7_1:60286785-60286804 | Msa1027730:intron | 35.0% | |
!! | CTCACTTGTGGAATTTTAAC+AGG | - | chr7_1:60286815-60286834 | Msa1027730:intron | 35.0% |
AGTGTATTTCCAAAAGTGGT+TGG | + | chr7_1:60286856-60286875 | None:intergenic | 35.0% | |
CCAAAGTGTATTTCCAAAAG+TGG | + | chr7_1:60286860-60286879 | None:intergenic | 35.0% | |
!! | CCACTTTTGGAAATACACTT+TGG | - | chr7_1:60286857-60286876 | Msa1027730:intron | 35.0% |
! | TACACTTTGGTTTAGTGAAG+AGG | - | chr7_1:60286870-60286889 | Msa1027730:intron | 35.0% |
ATATCGTGCAACTGAATTAC+AGG | - | chr7_1:60286921-60286940 | Msa1027730:intron | 35.0% | |
! | GGTTTACTCAGATTGGTTAA+TGG | + | chr7_1:60286978-60286997 | None:intergenic | 35.0% |
AAACACAGGTTTACTCAGAT+TGG | + | chr7_1:60286985-60287004 | None:intergenic | 35.0% | |
GCTAATTTAAAGATGCTGGT+TGG | - | chr7_1:60287009-60287028 | Msa1027730:intron | 35.0% | |
CCTCATATAACATTCTAGTG+TGG | + | chr7_1:60287391-60287410 | None:intergenic | 35.0% | |
CCACACTAGAATGTTATATG+AGG | - | chr7_1:60287388-60287407 | Msa1027730:intron | 35.0% | |
!!! | GGTTTTGGAATTGAGAACTA+CGG | - | chr7_1:60287879-60287898 | Msa1027730:intron | 35.0% |
!! | TGTGCTTTGAAGATTTCCTT+TGG | - | chr7_1:60288158-60288177 | Msa1027730:intron | 35.0% |
! | TCACTAGAAGTACATACCAA+AGG | + | chr7_1:60288177-60288196 | None:intergenic | 35.0% |
TATGACTTCAACTAACTCCT+TGG | - | chr7_1:60288210-60288229 | Msa1027730:intron | 35.0% | |
! | CTAGGGCAAATTCAGTATTT+TGG | - | chr7_1:60288259-60288278 | Msa1027730:intron | 35.0% |
ACTCCAAAAGCTGATGAAAA+CGG | - | chr7_1:60288354-60288373 | Msa1027730:intron | 35.0% | |
! | TAACCGTTTTCATCAGCTTT+TGG | + | chr7_1:60288360-60288379 | None:intergenic | 35.0% |
AAAATCTGACGATCTAACCA+AGG | - | chr7_1:60288564-60288583 | Msa1027730:CDS | 35.0% | |
TACATGAATGTCTGGATTTG+TGG | - | chr7_1:60288890-60288909 | Msa1027730:intron | 35.0% | |
ATCTACCATACTACCGTATA+TGG | + | chr7_1:60288937-60288956 | None:intergenic | 35.0% | |
GAAAGAAGATACATAGAGAC+GGG | + | chr7_1:60289070-60289089 | None:intergenic | 35.0% | |
GGAAAGAAGATACATAGAGA+CGG | + | chr7_1:60289071-60289090 | None:intergenic | 35.0% | |
GTCTCTATGTATCTTCTTTC+CGG | - | chr7_1:60289070-60289089 | Msa1027730:intron | 35.0% | |
ACGCACAAAAAGAATGTTAC+CGG | + | chr7_1:60289092-60289111 | None:intergenic | 35.0% | |
TGGTTTCTCTCTTTCCATTT+AGG | - | chr7_1:60289178-60289197 | Msa1027730:intron | 35.0% | |
ATTTCTCGATCAATCTGCAA+GGG | + | chr7_1:60289282-60289301 | None:intergenic | 35.0% | |
AATTTCTCGATCAATCTGCA+AGG | + | chr7_1:60289283-60289302 | None:intergenic | 35.0% | |
TTCCATTAGTTATGGCAACA+AGG | - | chr7_1:60289302-60289321 | Msa1027730:CDS | 35.0% | |
TCCATTAGTTATGGCAACAA+GGG | - | chr7_1:60289303-60289322 | Msa1027730:CDS | 35.0% | |
GAACTGGATCCATAATTTAC+GGG | - | chr7_1:60289716-60289735 | Msa1027730:intron | 35.0% | |
CTGCATCAAGTGGAAAAATA+TGG | + | chr7_1:60289931-60289950 | None:intergenic | 35.0% | |
! | CATATTTTTCCACTTGATGC+AGG | - | chr7_1:60289929-60289948 | Msa1027730:CDS | 35.0% |
CAGGAACTTCTATATCTGTA+TGG | - | chr7_1:60289948-60289967 | Msa1027730:CDS | 35.0% | |
!!! | AAATTTTAGTCTTGGTGCAC+AGG | + | chr7_1:60290031-60290050 | None:intergenic | 35.0% |
CAACAGAAACAACTAAGGAA+TGG | + | chr7_1:60290072-60290091 | None:intergenic | 35.0% | |
!! | CATTCCTTAGTTGTTTCTGT+TGG | - | chr7_1:60290070-60290089 | Msa1027730:intron | 35.0% |
CATACCAACAGAAACAACTA+AGG | + | chr7_1:60290077-60290096 | None:intergenic | 35.0% | |
! | TGATTGCTTCTGAAGGATAA+TGG | + | chr7_1:60290125-60290144 | None:intergenic | 35.0% |
! | CCATTATCTAGCAGAGTTTT+GGG | + | chr7_1:60290362-60290381 | None:intergenic | 35.0% |
! | TCCATTATCTAGCAGAGTTT+TGG | + | chr7_1:60290363-60290382 | None:intergenic | 35.0% |
ACAAGCTTGTCTACATAAGA+TGG | + | chr7_1:60290473-60290492 | None:intergenic | 35.0% | |
AAGGTAGCCATAAATTTCTC+AGG | + | chr7_1:60290500-60290519 | None:intergenic | 35.0% | |
!! | GAAAAAGGGTATCATGTTTG+TGG | + | chr7_1:60290670-60290689 | None:intergenic | 35.0% |
CAGTAGACAAGTGATGAAAA+AGG | + | chr7_1:60290685-60290704 | None:intergenic | 35.0% | |
!!! | CATTTTAGCTTTCCATCTAC+TGG | + | chr7_1:60290792-60290811 | None:intergenic | 35.0% |
TACATATCAATGGTCTGCTT+GGG | + | chr7_1:60290821-60290840 | None:intergenic | 35.0% | |
TTACATATCAATGGTCTGCT+TGG | + | chr7_1:60290822-60290841 | None:intergenic | 35.0% | |
! | AGCAGAGTGTTACATATCAA+TGG | + | chr7_1:60290831-60290850 | None:intergenic | 35.0% |
! | CAATTAGAAGCATGTAGTGT+AGG | + | chr7_1:60291213-60291232 | None:intergenic | 35.0% |
TGACTTTGAATTGCTCAAGA+AGG | - | chr7_1:60291423-60291442 | Msa1027730:intron | 35.0% | |
TTCCTGGCTATCAATGATAA+GGG | + | chr7_1:60291449-60291468 | None:intergenic | 35.0% | |
TCATTTACCATTCTGCTCAA+AGG | + | chr7_1:60291622-60291641 | None:intergenic | 35.0% | |
TCTGCTATTGTATATAGACG+AGG | - | chr7_1:60291679-60291698 | Msa1027730:CDS | 35.0% | |
ACAATGTGACATGGTTATCA+AGG | + | chr7_1:60291784-60291803 | None:intergenic | 35.0% | |
TCTAACTTGGACTAAAGATC+AGG | + | chr7_1:60291823-60291842 | None:intergenic | 35.0% | |
CTCATTGTCAATTCAGTTCT+TGG | - | chr7_1:60291849-60291868 | Msa1027730:intron | 35.0% | |
AAGTTTCGAGCTTTGCTTCT+GGG | + | chr7_1:60285730-60285749 | None:intergenic | 40.0% | |
AAAGTTTCGAGCTTTGCTTC+TGG | + | chr7_1:60285731-60285750 | None:intergenic | 40.0% | |
TGTGATTCCAGAAAAGGGTT+TGG | - | chr7_1:60285942-60285961 | Msa1027730:CDS | 40.0% | |
!!! | TCCATCAGTTGCTGTTTTCA+GGG | + | chr7_1:60286296-60286315 | None:intergenic | 40.0% |
TTGAAGGAGATGTAGATGAC+AGG | - | chr7_1:60286670-60286689 | Msa1027730:intron | 40.0% | |
CTCTATGGAAACCGTATGTA+TGG | - | chr7_1:60286739-60286758 | Msa1027730:intron | 40.0% | |
! | AAGTGGTTGGAAGCATATCA+AGG | + | chr7_1:60286843-60286862 | None:intergenic | 40.0% |
! | GATATGCTTCCAACCACTTT+TGG | - | chr7_1:60286844-60286863 | Msa1027730:intron | 40.0% |
AAAGCACAGAAACCAACACA+TGG | + | chr7_1:60287046-60287065 | None:intergenic | 40.0% | |
TGGTCAATCACGGAAAATAG+CGG | + | chr7_1:60287371-60287390 | None:intergenic | 40.0% | |
CATTCTAGTGTGGTCAATCA+CGG | + | chr7_1:60287381-60287400 | None:intergenic | 40.0% | |
! | CCTAAATTTGTTCGCCTGAA+AGG | + | chr7_1:60287530-60287549 | None:intergenic | 40.0% |
CCTTTCAGGCGAACAAATTT+AGG | - | chr7_1:60287527-60287546 | Msa1027730:intron | 40.0% | |
!! | TTAGGCTGTTTTACGGGAAT+TGG | - | chr7_1:60287545-60287564 | Msa1027730:intron | 40.0% |
!! | TAGGCTGTTTTACGGGAATT+GGG | - | chr7_1:60287546-60287565 | Msa1027730:intron | 40.0% |
ATACCTTCTCAACTACCTTC+AGG | - | chr7_1:60288025-60288044 | Msa1027730:intron | 40.0% | |
AATCCTGAAGGTAGTTGAGA+AGG | + | chr7_1:60288031-60288050 | None:intergenic | 40.0% | |
!! | TATGACCTGTTTTTCCAGAG+AGG | - | chr7_1:60288135-60288154 | Msa1027730:intron | 40.0% |
AAGTCAGATATCAACCTCCA+AGG | + | chr7_1:60288230-60288249 | None:intergenic | 40.0% | |
! | ATCTGACTTGCATTCATGCT+AGG | - | chr7_1:60288241-60288260 | Msa1027730:intron | 40.0% |
! | TCTGACTTGCATTCATGCTA+GGG | - | chr7_1:60288242-60288261 | Msa1027730:intron | 40.0% |
TGATGAACATCTTGCATCTC+AGG | + | chr7_1:60288327-60288346 | None:intergenic | 40.0% | |
TGTCAGGAGACAATCTTTAC+AGG | + | chr7_1:60288447-60288466 | None:intergenic | 40.0% | |
! | GATCGTCAGATTTTGTGACT+TGG | + | chr7_1:60288558-60288577 | None:intergenic | 40.0% |
GATTGCAAAAGTCAATGCCA+GGG | + | chr7_1:60288642-60288661 | None:intergenic | 40.0% | |
TGATTGCAAAAGTCAATGCC+AGG | + | chr7_1:60288643-60288662 | None:intergenic | 40.0% | |
!!! | GGCATTGACTTTTGCAATCA+TGG | - | chr7_1:60288643-60288662 | Msa1027730:intron | 40.0% |
ACTACCGTATATGGCAAGAA+AGG | + | chr7_1:60288928-60288947 | None:intergenic | 40.0% | |
TCTTGCCATATACGGTAGTA+TGG | - | chr7_1:60288929-60288948 | Msa1027730:intron | 40.0% | |
! | TCTGATTGGCCATGTAATCA+AGG | + | chr7_1:60288992-60289011 | None:intergenic | 40.0% |
!! | CTATTGGCTTCAGATCTGAT+TGG | + | chr7_1:60289006-60289025 | None:intergenic | 40.0% |
! | ATCTGAAGCCAATAGCAACA+TGG | - | chr7_1:60289011-60289030 | Msa1027730:CDS | 40.0% |
! | TCTGAAGCCAATAGCAACAT+GGG | - | chr7_1:60289012-60289031 | Msa1027730:CDS | 40.0% |
TCAACTTCCCATGTTGCTAT+TGG | + | chr7_1:60289022-60289041 | None:intergenic | 40.0% | |
ATAGCAACATGGGAAGTTGA+TGG | - | chr7_1:60289022-60289041 | Msa1027730:CDS | 40.0% | |
TCCCTTGTTGCCATAACTAA+TGG | + | chr7_1:60289307-60289326 | None:intergenic | 40.0% | |
TTATGGCAACAAGGGAAATG+AGG | - | chr7_1:60289311-60289330 | Msa1027730:CDS | 40.0% | |
! | TGTTGAATGAGTGAGAGCAT+AGG | - | chr7_1:60289390-60289409 | Msa1027730:intron | 40.0% |
! | TGCTATCAAAGAGGTATGCA+AGG | - | chr7_1:60289595-60289614 | Msa1027730:intron | 40.0% |
! | GCTATCAAAGAGGTATGCAA+GGG | - | chr7_1:60289596-60289615 | Msa1027730:intron | 40.0% |
!! | GTTCTGGTTCAATGCTTTGT+TGG | - | chr7_1:60289657-60289676 | Msa1027730:intron | 40.0% |
GGGCCAATAAAATTCCATCA+AGG | - | chr7_1:60289736-60289755 | Msa1027730:intron | 40.0% | |
TAAGCTAAAAGGCCTAGTGT+AGG | + | chr7_1:60289770-60289789 | None:intergenic | 40.0% | |
CAACAACAGAAGTTCCACTT+GGG | + | chr7_1:60289856-60289875 | None:intergenic | 40.0% | |
TCAACAACAGAAGTTCCACT+TGG | + | chr7_1:60289857-60289876 | None:intergenic | 40.0% | |
AGTGGAACTTCTGTTGTTGA+AGG | - | chr7_1:60289857-60289876 | Msa1027730:intron | 40.0% | |
ATAGAAGTTCCTGCATCAAG+TGG | + | chr7_1:60289941-60289960 | None:intergenic | 40.0% | |
CTGTATGGTTTCGTCATTGA+TGG | - | chr7_1:60289963-60289982 | Msa1027730:intron | 40.0% | |
TAACACAGATGACTACCTCA+TGG | - | chr7_1:60289986-60290005 | Msa1027730:intron | 40.0% | |
AGATGACTACCTCATGGTAA+TGG | - | chr7_1:60289992-60290011 | Msa1027730:intron | 40.0% | |
AAGTGTAAGCCATTACCATG+AGG | + | chr7_1:60290004-60290023 | None:intergenic | 40.0% | |
CCCAAAACTCTGCTAGATAA+TGG | - | chr7_1:60290359-60290378 | Msa1027730:intron | 40.0% | |
GTTTGCAACTATAGTTGGAG+TGG | - | chr7_1:60290434-60290453 | Msa1027730:intron | 40.0% | |
CTAAGACTGGAGCTAAGTAA+GGG | + | chr7_1:60290615-60290634 | None:intergenic | 40.0% | |
ACTAAGACTGGAGCTAAGTA+AGG | + | chr7_1:60290616-60290635 | None:intergenic | 40.0% | |
! | ATTTTCAGATGCTGTCCTGA+TGG | + | chr7_1:60290859-60290878 | None:intergenic | 40.0% |
TTCTGTCACATGAAGCTTGT+TGG | - | chr7_1:60290986-60291005 | Msa1027730:CDS | 40.0% | |
TAGATGTCCAGTCAGCAATA+TGG | - | chr7_1:60291038-60291057 | Msa1027730:intron | 40.0% | |
AGATGTCCAGTCAGCAATAT+GGG | - | chr7_1:60291039-60291058 | Msa1027730:intron | 40.0% | |
ATGGCGCATCGGATATAAAA+AGG | + | chr7_1:60291268-60291287 | None:intergenic | 40.0% | |
CAATAAGTGAAATGGCGCAT+CGG | + | chr7_1:60291279-60291298 | None:intergenic | 40.0% | |
CTTCCTGGCTATCAATGATA+AGG | + | chr7_1:60291450-60291469 | None:intergenic | 40.0% | |
!! | CATACTGTTTGCTATCTTCC+TGG | + | chr7_1:60291465-60291484 | None:intergenic | 40.0% |
CAGAATGGTAAATGACTCAG+AGG | - | chr7_1:60291627-60291646 | Msa1027730:CDS | 40.0% | |
CAAAGTAGGCGCAAATCAAG+AGG | - | chr7_1:60285691-60285710 | Msa1027730:three_prime_UTR | 45.0% | |
CGCAAATCAAGAGGTAGCAA+TGG | - | chr7_1:60285700-60285719 | Msa1027730:three_prime_UTR | 45.0% | |
AGCTCGAAACTTTCTTGCAG+TGG | - | chr7_1:60285738-60285757 | Msa1027730:three_prime_UTR | 45.0% | |
AACTTTCTTGCAGTGGCTAC+AGG | - | chr7_1:60285745-60285764 | Msa1027730:three_prime_UTR | 45.0% | |
!! | GGCTACAGGTTTGTTAACTC+TGG | - | chr7_1:60285759-60285778 | Msa1027730:three_prime_UTR | 45.0% |
TTGAATTCAGGCAAATGGGG+TGG | - | chr7_1:60285893-60285912 | Msa1027730:CDS | 45.0% | |
!!! | GTCCATCAGTTGCTGTTTTC+AGG | + | chr7_1:60286297-60286316 | None:intergenic | 45.0% |
GGATCTTGCAATACCCTCAT+TGG | + | chr7_1:60286621-60286640 | None:intergenic | 45.0% | |
!!! | GCAAGATCCTTTTCTAGGAC+CGG | - | chr7_1:60286632-60286651 | Msa1027730:intron | 45.0% |
CTACATTCCGGTCCTAGAAA+AGG | + | chr7_1:60286642-60286661 | None:intergenic | 45.0% | |
GTTTGCGCAAGGATTCTCTA+TGG | - | chr7_1:60286724-60286743 | Msa1027730:intron | 45.0% | |
TTGGGAGTTTCACTCACTTG+TGG | - | chr7_1:60286803-60286822 | Msa1027730:intron | 45.0% | |
GAGGAACTTCAAGAGCTAAG+AGG | - | chr7_1:60286889-60286908 | Msa1027730:intron | 45.0% | |
GCTACATACCCATTACACCA+TGG | + | chr7_1:60287485-60287504 | None:intergenic | 45.0% | |
ATCTTCAAAGCACACCTCTC+TGG | + | chr7_1:60288152-60288171 | None:intergenic | 45.0% | |
GACTTCAACTAACTCCTTGG+AGG | - | chr7_1:60288213-60288232 | Msa1027730:intron | 45.0% | |
! | GCAATGGAGTGTTCAAAGCA+CGG | + | chr7_1:60288287-60288306 | None:intergenic | 45.0% |
CTGACATGTGTCCAATGGAT+GGG | - | chr7_1:60288461-60288480 | Msa1027730:intron | 45.0% | |
ATAAACGGAGACCCATCCAT+TGG | + | chr7_1:60288475-60288494 | None:intergenic | 45.0% | |
AGTGCAAGGAGACACTGTTT+GGG | - | chr7_1:60288603-60288622 | Msa1027730:intron | 45.0% | |
TGAATGTCTGGATTTGTGGC+TGG | - | chr7_1:60288894-60288913 | Msa1027730:intron | 45.0% | |
!! | ACATGGGAAGTTGATGGAAC+TGG | - | chr7_1:60289028-60289047 | Msa1027730:CDS | 45.0% |
! | GATGGAACTGGCTTAACAAC+AGG | - | chr7_1:60289040-60289059 | Msa1027730:CDS | 45.0% |
! | AGGTATGCAAGGGAAGCATA+CGG | - | chr7_1:60289606-60289625 | Msa1027730:intron | 45.0% |
TGTAGGATGCAATGCCTTGA+TGG | + | chr7_1:60289753-60289772 | None:intergenic | 45.0% | |
!! | AAGGCATTGCATCCTACACT+AGG | - | chr7_1:60289755-60289774 | Msa1027730:intron | 45.0% |
!!! | CACTAGGCCTTTTAGCTTAC+TGG | - | chr7_1:60289771-60289790 | Msa1027730:intron | 45.0% |
AGCGAGTCCAGTAAGCTAAA+AGG | + | chr7_1:60289781-60289800 | None:intergenic | 45.0% | |
ACTAAATGCATGAGCCCAAG+TGG | - | chr7_1:60289839-60289858 | Msa1027730:intron | 45.0% | |
TTCAGTTTCTGTTGTCCCTC+AGG | - | chr7_1:60290098-60290117 | Msa1027730:intron | 45.0% | |
!! | CTGAAGGATAATGGACCTGA+GGG | + | chr7_1:60290116-60290135 | None:intergenic | 45.0% |
!! | TCTGAAGGATAATGGACCTG+AGG | + | chr7_1:60290117-60290136 | None:intergenic | 45.0% |
ATACCTGCACTTCAAGAAGC+TGG | + | chr7_1:60290176-60290195 | None:intergenic | 45.0% | |
TTGCATGGCTATGGTTCTCA+AGG | + | chr7_1:60290519-60290538 | None:intergenic | 45.0% | |
GAAAAGCTCATCCTCTTGCA+TGG | + | chr7_1:60290534-60290553 | None:intergenic | 45.0% | |
! | GCAAGAGGATGAGCTTTTCA+AGG | - | chr7_1:60290535-60290554 | Msa1027730:intron | 45.0% |
GGTTTCGTCAATGCTAGAAG+AGG | - | chr7_1:60290556-60290575 | Msa1027730:intron | 45.0% | |
GCAGTTTCAGTGACTAAGAC+TGG | + | chr7_1:60290628-60290647 | None:intergenic | 45.0% | |
!!! | ACACTCTGCTTTTTGCCATC+AGG | - | chr7_1:60290841-60290860 | Msa1027730:intron | 45.0% |
!! | ATGAAGCTTGTTGGACCTGA+AGG | - | chr7_1:60290995-60291014 | Msa1027730:CDS | 45.0% |
!! | TGAAGCTTGTTGGACCTGAA+GGG | - | chr7_1:60290996-60291015 | Msa1027730:CDS | 45.0% |
GATAATTGTCTCTCCCCTTC+AGG | + | chr7_1:60291013-60291032 | None:intergenic | 45.0% | |
AAACCTCCCATATTGCTGAC+TGG | + | chr7_1:60291048-60291067 | None:intergenic | 45.0% | |
TCAGCAATATGGGAGGTTTG+CGG | - | chr7_1:60291049-60291068 | Msa1027730:intron | 45.0% | |
!! | ATGGACCTTGAAGAGCATTC+TGG | - | chr7_1:60291388-60291407 | Msa1027730:intron | 45.0% |
CTGTTCCAGAATGCTCTTCA+AGG | + | chr7_1:60291396-60291415 | None:intergenic | 45.0% | |
!! | TGAAGAGCATTCTGGAACAG+AGG | - | chr7_1:60291396-60291415 | Msa1027730:intron | 45.0% |
TTCGGCACGCCCTTAAAAAT+TGG | - | chr7_1:60291972-60291991 | Msa1027730:five_prime_UTR | 45.0% | |
TCGGCACGCCCTTAAAAATT+GGG | - | chr7_1:60291973-60291992 | Msa1027730:five_prime_UTR | 45.0% | |
!!! | TTGCTGTTTTCAGGGCCGTT+CGG | + | chr7_1:60286288-60286307 | None:intergenic | 50.0% |
GCCCTGAAAACAGCAACTGA+TGG | - | chr7_1:60286292-60286311 | Msa1027730:intron | 50.0% | |
AAGCACCTGTGACGCTGTTT+GGG | + | chr7_1:60286347-60286366 | None:intergenic | 50.0% | |
TAAGCACCTGTGACGCTGTT+TGG | + | chr7_1:60286348-60286367 | None:intergenic | 50.0% | |
! | TAAAGATGCTGGTTGGCCAG+TGG | - | chr7_1:60287016-60287035 | Msa1027730:intron | 50.0% |
ACCAACACATGGATGACCAC+TGG | + | chr7_1:60287035-60287054 | None:intergenic | 50.0% | |
ATTGCGGCTCTATATCGCTG+TGG | - | chr7_1:60287326-60287345 | Msa1027730:intron | 50.0% | |
! | GCACACCTCTCTGGAAAAAC+AGG | + | chr7_1:60288143-60288162 | None:intergenic | 50.0% |
GAGAGAGAGAGAGAGAGAGA+CGG | + | chr7_1:60288385-60288404 | None:intergenic | 50.0% | |
GTCTCCTGACATGTGTCCAA+TGG | - | chr7_1:60288456-60288475 | Msa1027730:intron | 50.0% | |
CCATCCATTGGACACATGTC+AGG | + | chr7_1:60288463-60288482 | None:intergenic | 50.0% | |
CCTGACATGTGTCCAATGGA+TGG | - | chr7_1:60288460-60288479 | Msa1027730:intron | 50.0% | |
TGTGCTGTGTGTGGTTTCCT+TGG | + | chr7_1:60288584-60288603 | None:intergenic | 50.0% | |
CAGTGCAAGGAGACACTGTT+TGG | - | chr7_1:60288602-60288621 | Msa1027730:intron | 50.0% | |
!! | AGGAGACACTGTTTGGGTTG+AGG | - | chr7_1:60288609-60288628 | Msa1027730:intron | 50.0% |
!! | GGAGACACTGTTTGGGTTGA+GGG | - | chr7_1:60288610-60288629 | Msa1027730:intron | 50.0% |
GAGCACGTGGAAAGCTCATA+TGG | + | chr7_1:60289636-60289655 | None:intergenic | 50.0% | |
TTGAACCAGAACTGAGCACG+TGG | + | chr7_1:60289649-60289668 | None:intergenic | 50.0% | |
AAGCCAGCTTCTTGAAGTGC+AGG | - | chr7_1:60290170-60290189 | Msa1027730:intron | 50.0% | |
!!! | CCACTGTTTTTGGTGCCTGA+TGG | + | chr7_1:60290392-60290411 | None:intergenic | 50.0% |
CCATCAGGCACCAAAAACAG+TGG | - | chr7_1:60290389-60290408 | Msa1027730:intron | 50.0% | |
GAGAACCATAGCCATGCAAG+AGG | - | chr7_1:60290520-60290539 | Msa1027730:intron | 50.0% | |
CTCATCCTCTTGCATGGCTA+TGG | + | chr7_1:60290528-60290547 | None:intergenic | 50.0% | |
!! | GAAGCTTGTTGGACCTGAAG+GGG | - | chr7_1:60290997-60291016 | Msa1027730:CDS | 50.0% |
TGTCCAGTCAGCAATATGGG+AGG | - | chr7_1:60291042-60291061 | Msa1027730:intron | 50.0% | |
CTTCATGTCAAGTGAGTGCC+AGG | - | chr7_1:60291106-60291125 | Msa1027730:intron | 50.0% | |
! | GGCCCTTATCATTGATAGCC+AGG | - | chr7_1:60291444-60291463 | Msa1027730:intron | 50.0% |
CGGCACGCCCTTAAAAATTG+GGG | - | chr7_1:60291974-60291993 | Msa1027730:five_prime_UTR | 50.0% | |
GCCAGTGGTCATCCATGTGT+TGG | - | chr7_1:60287031-60287050 | Msa1027730:intron | 55.0% | |
ACCACACACAGCACAGTGCA+AGG | - | chr7_1:60288589-60288608 | Msa1027730:intron | 55.0% | |
TCCTTGCACTGTGCTGTGTG+TGG | + | chr7_1:60288593-60288612 | None:intergenic | 55.0% | |
GCTTTCCACGTGCTCAGTTC+TGG | - | chr7_1:60289641-60289660 | Msa1027730:intron | 55.0% | |
TGGGAGGTTTGCGGTGATTC+TGG | - | chr7_1:60291058-60291077 | Msa1027730:intron | 55.0% | |
GCAAATGGGGTGGAGCTACG+AGG | - | chr7_1:60285903-60285922 | Msa1027730:CDS | 60.0% | |
GCTCTCCCAAACAGCGTCAC+AGG | - | chr7_1:60286339-60286358 | Msa1027730:intron | 60.0% | |
! | GACAGTGGAGCGTTTGCGCA+AGG | - | chr7_1:60286713-60286732 | Msa1027730:intron | 60.0% |
! | TGGGTTGAGGGTCTTGTCCC+TGG | - | chr7_1:60288622-60288641 | Msa1027730:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 60285565 | 60292053 | 60285565 | ID=Msa1027730;Name=Msa1027730 |
chr7_1 | mRNA | 60285565 | 60292053 | 60285565 | ID=Msa1027730-mRNA-1;Parent=Msa1027730;Name=Msa1027730-mRNA-1;_AED=0.10;_eAED=0.10;_QI=154|0.92|1|1|0.92|0.93|15|267|537 |
chr7_1 | exon | 60285565 | 60285988 | 60285565 | ID=Msa1027730-mRNA-1:exon:12485;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60286139 | 60286234 | 60286139 | ID=Msa1027730-mRNA-1:exon:12484;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60286502 | 60286617 | 60286502 | ID=Msa1027730-mRNA-1:exon:12483;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60287041 | 60287283 | 60287041 | ID=Msa1027730-mRNA-1:exon:12482;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60287427 | 60287498 | 60287427 | ID=Msa1027730-mRNA-1:exon:12481;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60287611 | 60287667 | 60287611 | ID=Msa1027730-mRNA-1:exon:12480;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60288286 | 60288350 | 60288286 | ID=Msa1027730-mRNA-1:exon:12479;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60288527 | 60288607 | 60288527 | ID=Msa1027730-mRNA-1:exon:12478;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60288954 | 60289067 | 60288954 | ID=Msa1027730-mRNA-1:exon:12477;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60289243 | 60289355 | 60289243 | ID=Msa1027730-mRNA-1:exon:12476;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60289890 | 60289972 | 60289890 | ID=Msa1027730-mRNA-1:exon:12475;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60290676 | 60290781 | 60290676 | ID=Msa1027730-mRNA-1:exon:12474;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60290867 | 60291038 | 60290867 | ID=Msa1027730-mRNA-1:exon:12473;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60291625 | 60291715 | 60291625 | ID=Msa1027730-mRNA-1:exon:12472;Parent=Msa1027730-mRNA-1 |
chr7_1 | exon | 60291852 | 60292053 | 60291852 | ID=Msa1027730-mRNA-1:exon:12471;Parent=Msa1027730-mRNA-1 |
chr7_1 | five_prime_UTR | 60291900 | 60292053 | 60291900 | ID=Msa1027730-mRNA-1:five_prime_utr;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60291852 | 60291899 | 60291852 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60291625 | 60291715 | 60291625 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60290867 | 60291038 | 60290867 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60290676 | 60290781 | 60290676 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60289890 | 60289972 | 60289890 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60289243 | 60289355 | 60289243 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60288954 | 60289067 | 60288954 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60288527 | 60288607 | 60288527 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60288286 | 60288350 | 60288286 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60287611 | 60287667 | 60287611 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60287427 | 60287498 | 60287427 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60287041 | 60287283 | 60287041 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60286502 | 60286617 | 60286502 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60286139 | 60286234 | 60286139 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | CDS | 60285832 | 60285988 | 60285832 | ID=Msa1027730-mRNA-1:cds;Parent=Msa1027730-mRNA-1 |
chr7_1 | three_prime_UTR | 60285565 | 60285831 | 60285565 | ID=Msa1027730-mRNA-1:three_prime_utr;Parent=Msa1027730-mRNA-1 |
Gene Sequence |
Protein sequence |