Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898500 | RYQ87513.1 | 60.000 | 100 | 18 | 2 | 28 | 107 | 111 | 208 | 1.69e-27 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898500 | sp|Q43839|G6PDC_SOLTU | 55.914 | 93 | 21 | 1 | 28 | 100 | 102 | 194 | 1.13e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898500 | A0A444XDI8 | 60.000 | 100 | 18 | 2 | 28 | 107 | 111 | 208 | 8.07e-28 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0633060 | Msa0898500 | 0.809130 | 2.203006e-50 | -8.615850e-47 |
| Msa0644620 | Msa0898500 | 0.803750 | 3.003032e-49 | -8.615850e-47 |
| Msa0691380 | Msa0898500 | 0.802825 | 4.667894e-49 | -8.615850e-47 |
| Msa0417270 | Msa0898500 | 0.802541 | 5.343277e-49 | -8.615850e-47 |
| Msa0898500 | Msa0898510 | 0.852107 | 5.734013e-61 | -8.615850e-47 |
| Msa0898500 | Msa1027730 | 0.820421 | 6.920828e-53 | -8.615850e-47 |
| Msa0898500 | Msa1044420 | 0.818086 | 2.355338e-52 | -8.615850e-47 |
| Msa0898500 | Msa1048660 | 0.862258 | 5.754204e-64 | -8.615850e-47 |
| Msa0898500 | Msa1186060 | 0.810870 | 9.297364e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898500 | MtrunA17_Chr8g0341321 | 67.033 | 91 | 10 | 1 | 28 | 98 | 107 | 197 | 1.75e-31 | 119 |
| Msa0898500 | MtrunA17_Chr2g0333721 | 61.628 | 86 | 21 | 1 | 69 | 154 | 497 | 570 | 7.25e-26 | 103 |
| Msa0898500 | MtrunA17_Chr2g0304941 | 67.143 | 70 | 20 | 1 | 88 | 154 | 504 | 573 | 3.42e-23 | 95.5 |
| Msa0898500 | MtrunA17_Chr1g0148031 | 54.651 | 86 | 27 | 1 | 69 | 154 | 499 | 572 | 1.24e-22 | 94.0 |
| Msa0898500 | MtrunA17_Chr4g0059961 | 54.651 | 86 | 27 | 1 | 69 | 154 | 503 | 576 | 1.24e-22 | 94.0 |
| Msa0898500 | MtrunA17_Chr3g0138931 | 53.488 | 86 | 28 | 1 | 69 | 154 | 499 | 572 | 1.84e-22 | 93.6 |
| Msa0898500 | MtrunA17_Chr4g0065481 | 65.714 | 70 | 21 | 1 | 88 | 154 | 504 | 573 | 3.07e-22 | 92.8 |
| Msa0898500 | MtrunA17_Chr2g0298031 | 52.326 | 86 | 29 | 1 | 69 | 154 | 505 | 578 | 1.88e-21 | 90.5 |
| Msa0898500 | MtrunA17_Chr1g0147981 | 70.175 | 57 | 17 | 0 | 98 | 154 | 533 | 589 | 2.96e-21 | 90.1 |
| Msa0898500 | MtrunA17_Chr4g0072131 | 70.175 | 57 | 17 | 0 | 98 | 154 | 519 | 575 | 3.86e-21 | 89.7 |
| Msa0898500 | MtrunA17_Chr6g0452721 | 52.326 | 86 | 29 | 1 | 69 | 154 | 501 | 574 | 9.38e-21 | 88.6 |
| Msa0898500 | MtrunA17_Chr8g0365021 | 66.667 | 57 | 19 | 0 | 98 | 154 | 586 | 642 | 1.00e-19 | 85.9 |
| Msa0898500 | MtrunA17_Chr7g0276551 | 71.930 | 57 | 15 | 1 | 98 | 154 | 282 | 337 | 4.32e-19 | 84.0 |
| Msa0898500 | MtrunA17_Chr7g0222441 | 46.078 | 102 | 32 | 2 | 28 | 109 | 119 | 217 | 6.23e-19 | 83.2 |
| Msa0898500 | MtrunA17_Chr8g0335291 | 58.571 | 70 | 25 | 2 | 88 | 154 | 511 | 579 | 7.74e-18 | 80.1 |
| Msa0898500 | MtrunA17_Chr7g0271531 | 52.941 | 51 | 24 | 0 | 28 | 78 | 140 | 190 | 6.80e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898500 | AT4G30190.2 | 57.831 | 83 | 23 | 1 | 69 | 151 | 497 | 567 | 8.10e-24 | 97.8 |
| Msa0898500 | AT4G30190.1 | 55.814 | 86 | 26 | 1 | 69 | 154 | 497 | 570 | 2.15e-23 | 96.7 |
| Msa0898500 | AT1G80660.2 | 68.571 | 70 | 19 | 1 | 88 | 154 | 377 | 446 | 4.88e-23 | 95.5 |
| Msa0898500 | AT1G80660.1 | 68.571 | 70 | 19 | 1 | 88 | 154 | 506 | 575 | 5.55e-23 | 95.5 |
| Msa0898500 | AT1G80660.3 | 68.571 | 70 | 19 | 1 | 88 | 154 | 506 | 575 | 6.32e-23 | 95.1 |
| Msa0898500 | AT1G80660.4 | 68.571 | 70 | 19 | 1 | 88 | 154 | 506 | 575 | 6.38e-23 | 95.1 |
| Msa0898500 | AT5G62670.1 | 53.488 | 86 | 28 | 1 | 69 | 154 | 501 | 574 | 7.13e-23 | 95.1 |
| Msa0898500 | AT5G57350.3 | 65.714 | 70 | 21 | 1 | 88 | 154 | 240 | 309 | 2.27e-22 | 93.6 |
| Msa0898500 | AT3G47950.1 | 73.684 | 57 | 15 | 0 | 98 | 154 | 522 | 578 | 2.57e-22 | 93.6 |
| Msa0898500 | AT3G47950.2 | 73.684 | 57 | 15 | 0 | 98 | 154 | 522 | 578 | 2.57e-22 | 93.6 |
| Msa0898500 | AT5G57350.4 | 65.714 | 70 | 21 | 1 | 88 | 154 | 502 | 571 | 4.57e-22 | 92.8 |
| Msa0898500 | AT5G57350.2 | 65.714 | 70 | 21 | 1 | 88 | 154 | 502 | 571 | 4.57e-22 | 92.8 |
| Msa0898500 | AT5G57350.1 | 65.714 | 70 | 21 | 1 | 88 | 154 | 502 | 571 | 4.57e-22 | 92.8 |
| Msa0898500 | AT2G24520.4 | 53.488 | 86 | 28 | 1 | 69 | 154 | 236 | 309 | 6.37e-22 | 92.4 |
| Msa0898500 | AT2G24520.3 | 53.488 | 86 | 28 | 1 | 69 | 154 | 479 | 552 | 1.01e-21 | 91.7 |
| Msa0898500 | AT2G24520.1 | 53.488 | 86 | 28 | 1 | 69 | 154 | 479 | 552 | 1.01e-21 | 91.7 |
| Msa0898500 | AT2G24520.2 | 53.488 | 86 | 28 | 1 | 69 | 154 | 542 | 615 | 1.06e-21 | 91.7 |
| Msa0898500 | AT2G18960.3 | 53.488 | 86 | 28 | 1 | 69 | 154 | 433 | 506 | 1.50e-21 | 91.3 |
| Msa0898500 | AT2G18960.2 | 53.488 | 86 | 28 | 1 | 69 | 154 | 433 | 506 | 1.50e-21 | 91.3 |
| Msa0898500 | AT2G18960.1 | 53.488 | 86 | 28 | 1 | 69 | 154 | 497 | 570 | 1.57e-21 | 91.3 |
| Msa0898500 | AT5G35790.1 | 51.000 | 100 | 27 | 2 | 28 | 107 | 102 | 199 | 4.40e-21 | 89.7 |
| Msa0898500 | AT5G13110.1 | 48.913 | 92 | 27 | 1 | 28 | 99 | 121 | 212 | 1.20e-20 | 88.6 |
| Msa0898500 | AT3G42640.1 | 68.421 | 57 | 18 | 0 | 98 | 154 | 517 | 573 | 4.74e-20 | 87.0 |
| Msa0898500 | AT1G24280.1 | 49.451 | 91 | 26 | 1 | 28 | 98 | 124 | 214 | 6.71e-20 | 86.7 |
| Msa0898500 | AT2G07560.1 | 62.857 | 70 | 22 | 2 | 88 | 154 | 504 | 572 | 6.25e-19 | 84.0 |
| Msa0898500 | AT1G17260.1 | 68.421 | 57 | 17 | 1 | 98 | 154 | 522 | 577 | 3.48e-17 | 79.0 |
| Msa0898500 | AT3G60330.4 | 61.404 | 57 | 19 | 1 | 98 | 154 | 517 | 570 | 5.58e-15 | 72.4 |
| Msa0898500 | AT3G60330.3 | 61.404 | 57 | 19 | 1 | 98 | 154 | 517 | 570 | 5.58e-15 | 72.4 |
| Msa0898500 | AT3G60330.2 | 61.404 | 57 | 19 | 1 | 98 | 154 | 517 | 570 | 5.64e-15 | 72.4 |
| Msa0898500 | AT3G60330.1 | 61.404 | 57 | 19 | 1 | 98 | 154 | 517 | 570 | 5.64e-15 | 72.4 |
| Msa0898500 | AT1G09420.1 | 49.020 | 51 | 26 | 0 | 28 | 78 | 165 | 215 | 2.04e-12 | 65.1 |
| Msa0898500 | AT1G09420.2 | 49.020 | 51 | 26 | 0 | 28 | 78 | 165 | 215 | 2.21e-12 | 64.7 |
Find 51 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACAGAACTCATGTTTAA+AGG | 0.221139 | 6_1:-92627230 | Msa0898500:three_prime_UTR |
| TAACTCTTCATCAGTCATTT+TGG | 0.241437 | 6_1:+92628556 | None:intergenic |
| TGAGGAAGACTTTCTAGATT+TGG | 0.286859 | 6_1:-92628033 | Msa0898500:CDS |
| ATAGTTCTTGATGCCTCATT+TGG | 0.308689 | 6_1:+92627140 | None:intergenic |
| ATATTAACTGAAACCATTAA+AGG | 0.329851 | 6_1:+92627107 | None:intergenic |
| ATGAATAGATGAGGGAAATA+TGG | 0.357324 | 6_1:-92627311 | Msa0898500:exon |
| CTACAGAACTCATGTTTAAA+GGG | 0.363715 | 6_1:-92627229 | Msa0898500:three_prime_UTR |
| GTCTGTATTGGAAAGGAAAC+TGG | 0.409085 | 6_1:-92627806 | Msa0898500:CDS |
| GGCGTTGAGCAGTAGGATAC+TGG | 0.437103 | 6_1:-92627290 | Msa0898500:three_prime_UTR |
| GGATTTGTTGGTGTCTTCCC+TGG | 0.438451 | 6_1:-92627671 | Msa0898500:CDS |
| GGCTGCAATGGTGGCTGCAA+TGG | 0.454503 | 6_1:-92628868 | Msa0898500:CDS |
| GAGAAGGCTGATGGATTTGT+TGG | 0.455540 | 6_1:-92627683 | Msa0898500:CDS |
| ACCGGTGATCAGGTCTGTAT+TGG | 0.470048 | 6_1:-92627818 | Msa0898500:intron |
| GAAATATGGCGTTGAGCAGT+AGG | 0.481183 | 6_1:-92627297 | Msa0898500:three_prime_UTR |
| AACTGGTCGCAGGCTCGGCA+TGG | 0.489073 | 6_1:-92627789 | Msa0898500:CDS |
| TGATTCTGCATGTTAAAGTC+TGG | 0.492401 | 6_1:+92628519 | None:intergenic |
| AAATGACTGATGAAGAGTTA+AGG | 0.494086 | 6_1:-92628553 | Msa0898500:CDS |
| TTTGTATTATCAATTTACTC+TGG | 0.494897 | 6_1:-92627632 | Msa0898500:CDS |
| AATTGTATGTATATATTACC+AGG | 0.495220 | 6_1:+92627653 | None:intergenic |
| AAGGAAACTGGTCGCAGGCT+CGG | 0.496256 | 6_1:-92627794 | Msa0898500:CDS |
| AACAACAGTTATACTAAGGT+TGG | 0.501460 | 6_1:+92628810 | None:intergenic |
| GAACTTATTGAGAAGGCTGA+TGG | 0.506893 | 6_1:-92627692 | Msa0898500:CDS |
| TAGAAAAGAGCAAAGAGTGC+TGG | 0.507946 | 6_1:+92628750 | None:intergenic |
| TATCCATCATCCTCCCTCCT+TGG | 0.517757 | 6_1:-92627755 | Msa0898500:CDS |
| ACTGGTCGCAGGCTCGGCAT+GGG | 0.525330 | 6_1:-92627788 | Msa0898500:CDS |
| TTCCAAGCTAAAAGAGAAAG+AGG | 0.537849 | 6_1:-92628009 | Msa0898500:intron |
| GTTCTATAGAGTGCATGAGC+AGG | 0.538940 | 6_1:+92627260 | None:intergenic |
| TATACTAAGGTTGGATCCTG+TGG | 0.540104 | 6_1:+92628819 | None:intergenic |
| ATCCTTGTGCTTGCCAAGGA+GGG | 0.542106 | 6_1:+92627742 | None:intergenic |
| TTCTCAATAAGTTCATCGAC+CGG | 0.549212 | 6_1:+92627701 | None:intergenic |
| CTCCCTCCTTGGCAAGCACA+AGG | 0.551626 | 6_1:-92627744 | Msa0898500:CDS |
| GAAACTGTTATGAATAGATG+AGG | 0.566329 | 6_1:-92627320 | Msa0898500:exon |
| GGTCGATGAACTTATTGAGA+AGG | 0.577418 | 6_1:-92627699 | Msa0898500:CDS |
| CATCCTTGTGCTTGCCAAGG+AGG | 0.577904 | 6_1:+92627741 | None:intergenic |
| TGCATCGATTGCTTCACCTC+CGG | 0.579732 | 6_1:-92627720 | Msa0898500:CDS |
| TTGTCAGACTCTGAATCCAC+AGG | 0.589255 | 6_1:-92628835 | Msa0898500:CDS |
| ATGCATCCTTGTGCTTGCCA+AGG | 0.596619 | 6_1:+92627738 | None:intergenic |
| CATTGAGGAAATGGCTGCAA+TGG | 0.598365 | 6_1:-92628880 | None:intergenic |
| TTGGAAAGGAAACTGGTCGC+AGG | 0.601739 | 6_1:-92627799 | Msa0898500:CDS |
| CTATGAAGATTGGTTACCCG+AGG | 0.607456 | 6_1:-92628730 | Msa0898500:intron |
| TGAGGAAATGGCTGCAATGG+TGG | 0.607777 | 6_1:-92628877 | None:intergenic |
| TGATCAGGTCTGTATTGGAA+AGG | 0.610575 | 6_1:-92627813 | Msa0898500:intron |
| CTTGTGCTTGCCAAGGAGGG+AGG | 0.613362 | 6_1:+92627745 | None:intergenic |
| AAACTGTTATGAATAGATGA+GGG | 0.613750 | 6_1:-92627319 | Msa0898500:exon |
| TGGAAAATACTAAGCAGAGG+AGG | 0.621630 | 6_1:+92627160 | None:intergenic |
| TTGCCAAGGAGGGAGGATGA+TGG | 0.623656 | 6_1:+92627752 | None:intergenic |
| TAACATGCAGAATCAACAAG+AGG | 0.635487 | 6_1:-92628511 | Msa0898500:intron |
| ATTTGGAAAATACTAAGCAG+AGG | 0.665581 | 6_1:+92627157 | None:intergenic |
| ATTGTATGTATATATTACCA+GGG | 0.683381 | 6_1:+92627654 | None:intergenic |
| TCAATAAGTTCATCGACCGG+AGG | 0.693726 | 6_1:+92627704 | None:intergenic |
| TTCTTGTCCGTACAGCTCTG+AGG | 0.705556 | 6_1:-92628051 | Msa0898500:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAAGATTTTATGATTAAA+TGG | - | chr6_1:92628867-92628886 | Msa0898500:CDS | 15.0% |
| !!! | ATCAAGATTTTATGATTAAA+TGG | - | chr6_1:92628867-92628886 | Msa0898500:CDS | 15.0% |
| !! | GGTTAATGAATATTACAATT+TGG | + | chr6_1:92627562-92627581 | None:intergenic | 20.0% |
| !! | TCTTACTAACAACTTAAAAA+AGG | + | chr6_1:92627676-92627695 | None:intergenic | 20.0% |
| !! | TTGAAAGAATATTACATACA+GGG | + | chr6_1:92628037-92628056 | None:intergenic | 20.0% |
| !! | ATTGAAAGAATATTACATAC+AGG | + | chr6_1:92628038-92628057 | None:intergenic | 20.0% |
| !! | ATGTAATATTCTTTCAATCT+CGG | - | chr6_1:92628040-92628059 | Msa0898500:intron | 20.0% |
| !! | ATTGTATGTATATATTACCA+GGG | + | chr6_1:92628249-92628268 | None:intergenic | 20.0% |
| !! | AATTGTATGTATATATTACC+AGG | + | chr6_1:92628250-92628269 | None:intergenic | 20.0% |
| !! | TTTGTATTATCAATTTACTC+TGG | - | chr6_1:92628268-92628287 | Msa0898500:intron | 20.0% |
| !! | ATATTAACTGAAACCATTAA+AGG | + | chr6_1:92628796-92628815 | None:intergenic | 20.0% |
| !!! | AAGATTTTATGATTAAATGG+CGG | - | chr6_1:92628870-92628889 | Msa0898500:CDS | 20.0% |
| !! | GGTTAATGAATATTACAATT+TGG | + | chr6_1:92627562-92627581 | None:intergenic | 20.0% |
| !! | TCTTACTAACAACTTAAAAA+AGG | + | chr6_1:92627676-92627695 | None:intergenic | 20.0% |
| !! | TTGAAAGAATATTACATACA+GGG | + | chr6_1:92628037-92628056 | None:intergenic | 20.0% |
| !! | ATTGAAAGAATATTACATAC+AGG | + | chr6_1:92628038-92628057 | None:intergenic | 20.0% |
| !! | ATGTAATATTCTTTCAATCT+CGG | - | chr6_1:92628040-92628059 | Msa0898500:intron | 20.0% |
| !! | ATTGTATGTATATATTACCA+GGG | + | chr6_1:92628249-92628268 | None:intergenic | 20.0% |
| !! | AATTGTATGTATATATTACC+AGG | + | chr6_1:92628250-92628269 | None:intergenic | 20.0% |
| !! | TTTGTATTATCAATTTACTC+TGG | - | chr6_1:92628268-92628287 | Msa0898500:intron | 20.0% |
| !! | ATATTAACTGAAACCATTAA+AGG | + | chr6_1:92628796-92628815 | None:intergenic | 20.0% |
| !!! | AAAAAATCTTCTTTTTGGCA+AGG | + | chr6_1:92627130-92627149 | None:intergenic | 25.0% |
| ! | CTGTAGATGATTTAAATGTT+TGG | - | chr6_1:92627252-92627271 | Msa0898500:three_prime_UTR | 25.0% |
| !! | TGTTTGGAACAATATATCTA+AGG | - | chr6_1:92627268-92627287 | Msa0898500:three_prime_UTR | 25.0% |
| !! | ATGCAGAATTTTATTGTGTT+TGG | - | chr6_1:92627310-92627329 | Msa0898500:exon | 25.0% |
| ! | TTGTACAAAAGTTGCTAAAA+AGG | - | chr6_1:92627451-92627470 | Msa0898500:intron | 25.0% |
| !! | AATTTTCGTGAAATGACAAT+TGG | + | chr6_1:92627615-92627634 | None:intergenic | 25.0% |
| ! | TCATTTCACGAAAATTCAAT+AGG | - | chr6_1:92627619-92627638 | Msa0898500:CDS | 25.0% |
| ! | ACGAAAATTCAATAGGTAAT+TGG | - | chr6_1:92627626-92627645 | Msa0898500:CDS | 25.0% |
| !! | TCACATTTTTCATGTTATTG+TGG | - | chr6_1:92627711-92627730 | Msa0898500:CDS | 25.0% |
| !! | ATGAGTTCTTTTGAATTGTA+GGG | - | chr6_1:92627777-92627796 | Msa0898500:CDS | 25.0% |
| ! | GTAAATGTTAAGATGATTAC+CGG | - | chr6_1:92628064-92628083 | Msa0898500:intron | 25.0% |
| ! | CAAAATAAACAACAGAAATG+AGG | + | chr6_1:92628466-92628485 | None:intergenic | 25.0% |
| !!! | TTTATTTTGACTTGAATGTG+TGG | - | chr6_1:92628477-92628496 | Msa0898500:intron | 25.0% |
| ! | CAACAGAAAAAATCATGTAA+TGG | + | chr6_1:92628553-92628572 | None:intergenic | 25.0% |
| ! | AAACTGTTATGAATAGATGA+GGG | - | chr6_1:92628581-92628600 | Msa0898500:CDS | 25.0% |
| !!! | TATTTTGTTGGTTCCTTTAA+TGG | - | chr6_1:92628780-92628799 | Msa0898500:CDS | 25.0% |
| !!! | AAAAAATCTTCTTTTTGGCA+AGG | + | chr6_1:92627130-92627149 | None:intergenic | 25.0% |
| ! | CTGTAGATGATTTAAATGTT+TGG | - | chr6_1:92627252-92627271 | Msa0898500:three_prime_UTR | 25.0% |
| !! | TGTTTGGAACAATATATCTA+AGG | - | chr6_1:92627268-92627287 | Msa0898500:three_prime_UTR | 25.0% |
| !! | ATGCAGAATTTTATTGTGTT+TGG | - | chr6_1:92627310-92627329 | Msa0898500:exon | 25.0% |
| ! | TTGTACAAAAGTTGCTAAAA+AGG | - | chr6_1:92627451-92627470 | Msa0898500:intron | 25.0% |
| !! | AATTTTCGTGAAATGACAAT+TGG | + | chr6_1:92627615-92627634 | None:intergenic | 25.0% |
| ! | TCATTTCACGAAAATTCAAT+AGG | - | chr6_1:92627619-92627638 | Msa0898500:CDS | 25.0% |
| ! | ACGAAAATTCAATAGGTAAT+TGG | - | chr6_1:92627626-92627645 | Msa0898500:CDS | 25.0% |
| !! | TCACATTTTTCATGTTATTG+TGG | - | chr6_1:92627711-92627730 | Msa0898500:CDS | 25.0% |
| !! | ATGAGTTCTTTTGAATTGTA+GGG | - | chr6_1:92627777-92627796 | Msa0898500:CDS | 25.0% |
| ! | GTAAATGTTAAGATGATTAC+CGG | - | chr6_1:92628064-92628083 | Msa0898500:intron | 25.0% |
| ! | CAAAATAAACAACAGAAATG+AGG | + | chr6_1:92628466-92628485 | None:intergenic | 25.0% |
| !!! | TTTATTTTGACTTGAATGTG+TGG | - | chr6_1:92628477-92628496 | Msa0898500:intron | 25.0% |
| ! | CAACAGAAAAAATCATGTAA+TGG | + | chr6_1:92628553-92628572 | None:intergenic | 25.0% |
| ! | AAACTGTTATGAATAGATGA+GGG | - | chr6_1:92628581-92628600 | Msa0898500:CDS | 25.0% |
| !!! | TATTTTGTTGGTTCCTTTAA+TGG | - | chr6_1:92628780-92628799 | Msa0898500:CDS | 25.0% |
| AACAACAGTTATACTAAGGT+TGG | + | chr6_1:92627093-92627112 | None:intergenic | 30.0% | |
| AACCTTAGTATAACTGTTGT+TGG | - | chr6_1:92627092-92627111 | Msa0898500:three_prime_UTR | 30.0% | |
| ! | GCTGGAAAAAATCTTCTTTT+TGG | + | chr6_1:92627135-92627154 | None:intergenic | 30.0% |
| ! | TTGCTCTTTTCTATGAAGAT+TGG | - | chr6_1:92627160-92627179 | Msa0898500:three_prime_UTR | 30.0% |
| ! | TAACTCTTCATCAGTCATTT+TGG | + | chr6_1:92627347-92627366 | None:intergenic | 30.0% |
| AAATGACTGATGAAGAGTTA+AGG | - | chr6_1:92627347-92627366 | Msa0898500:intron | 30.0% | |
| GAACTATTCATGATAGTAGA+GGG | - | chr6_1:92627483-92627502 | Msa0898500:intron | 30.0% | |
| AAATGACAATTGGCAAATAG+GGG | + | chr6_1:92627605-92627624 | None:intergenic | 30.0% | |
| GAAATGACAATTGGCAAATA+GGG | + | chr6_1:92627606-92627625 | None:intergenic | 30.0% | |
| TGAAATGACAATTGGCAAAT+AGG | + | chr6_1:92627607-92627626 | None:intergenic | 30.0% | |
| AAAAGAACTCATCAGTATAG+GGG | + | chr6_1:92627769-92627788 | None:intergenic | 30.0% | |
| CAAAAGAACTCATCAGTATA+GGG | + | chr6_1:92627770-92627789 | None:intergenic | 30.0% | |
| TCAAAAGAACTCATCAGTAT+AGG | + | chr6_1:92627771-92627790 | None:intergenic | 30.0% | |
| ! | GATGAGTTCTTTTGAATTGT+AGG | - | chr6_1:92627776-92627795 | Msa0898500:CDS | 30.0% |
| CAGAAAAGAAGAAATGTAGT+TGG | - | chr6_1:92628294-92628313 | Msa0898500:intron | 30.0% | |
| ! | ATATCTTTGATGGCATCATT+CGG | - | chr6_1:92628503-92628522 | Msa0898500:intron | 30.0% |
| AAAAATCATGTAATGGTCTC+AGG | + | chr6_1:92628546-92628565 | None:intergenic | 30.0% | |
| GAAACTGTTATGAATAGATG+AGG | - | chr6_1:92628580-92628599 | Msa0898500:CDS | 30.0% | |
| ATGAATAGATGAGGGAAATA+TGG | - | chr6_1:92628589-92628608 | Msa0898500:intron | 30.0% | |
| ACTACAGAACTCATGTTTAA+AGG | - | chr6_1:92628670-92628689 | Msa0898500:intron | 30.0% | |
| CTACAGAACTCATGTTTAAA+GGG | - | chr6_1:92628671-92628690 | Msa0898500:intron | 30.0% | |
| ATTTGGAAAATACTAAGCAG+AGG | + | chr6_1:92628746-92628765 | None:intergenic | 30.0% | |
| ! | TGCTTAGTATTTTCCAAATG+AGG | - | chr6_1:92628747-92628766 | Msa0898500:CDS | 30.0% |
| AACAACAGTTATACTAAGGT+TGG | + | chr6_1:92627093-92627112 | None:intergenic | 30.0% | |
| AACCTTAGTATAACTGTTGT+TGG | - | chr6_1:92627092-92627111 | Msa0898500:three_prime_UTR | 30.0% | |
| ! | GCTGGAAAAAATCTTCTTTT+TGG | + | chr6_1:92627135-92627154 | None:intergenic | 30.0% |
| ! | TTGCTCTTTTCTATGAAGAT+TGG | - | chr6_1:92627160-92627179 | Msa0898500:three_prime_UTR | 30.0% |
| ! | TAACTCTTCATCAGTCATTT+TGG | + | chr6_1:92627347-92627366 | None:intergenic | 30.0% |
| AAATGACTGATGAAGAGTTA+AGG | - | chr6_1:92627347-92627366 | Msa0898500:intron | 30.0% | |
| GAACTATTCATGATAGTAGA+GGG | - | chr6_1:92627483-92627502 | Msa0898500:intron | 30.0% | |
| AAATGACAATTGGCAAATAG+GGG | + | chr6_1:92627605-92627624 | None:intergenic | 30.0% | |
| GAAATGACAATTGGCAAATA+GGG | + | chr6_1:92627606-92627625 | None:intergenic | 30.0% | |
| TGAAATGACAATTGGCAAAT+AGG | + | chr6_1:92627607-92627626 | None:intergenic | 30.0% | |
| AAAAGAACTCATCAGTATAG+GGG | + | chr6_1:92627769-92627788 | None:intergenic | 30.0% | |
| CAAAAGAACTCATCAGTATA+GGG | + | chr6_1:92627770-92627789 | None:intergenic | 30.0% | |
| TCAAAAGAACTCATCAGTAT+AGG | + | chr6_1:92627771-92627790 | None:intergenic | 30.0% | |
| ! | GATGAGTTCTTTTGAATTGT+AGG | - | chr6_1:92627776-92627795 | Msa0898500:CDS | 30.0% |
| CAGAAAAGAAGAAATGTAGT+TGG | - | chr6_1:92628294-92628313 | Msa0898500:intron | 30.0% | |
| ! | ATATCTTTGATGGCATCATT+CGG | - | chr6_1:92628503-92628522 | Msa0898500:intron | 30.0% |
| AAAAATCATGTAATGGTCTC+AGG | + | chr6_1:92628546-92628565 | None:intergenic | 30.0% | |
| GAAACTGTTATGAATAGATG+AGG | - | chr6_1:92628580-92628599 | Msa0898500:CDS | 30.0% | |
| ATGAATAGATGAGGGAAATA+TGG | - | chr6_1:92628589-92628608 | Msa0898500:intron | 30.0% | |
| ACTACAGAACTCATGTTTAA+AGG | - | chr6_1:92628670-92628689 | Msa0898500:intron | 30.0% | |
| CTACAGAACTCATGTTTAAA+GGG | - | chr6_1:92628671-92628690 | Msa0898500:intron | 30.0% | |
| ATTTGGAAAATACTAAGCAG+AGG | + | chr6_1:92628746-92628765 | None:intergenic | 30.0% | |
| ! | TGCTTAGTATTTTCCAAATG+AGG | - | chr6_1:92628747-92628766 | Msa0898500:CDS | 30.0% |
| CTCCAACAACAGTTATACTA+AGG | + | chr6_1:92627097-92627116 | None:intergenic | 35.0% | |
| TACTATCACAATTCAGACCT+CGG | + | chr6_1:92627190-92627209 | None:intergenic | 35.0% | |
| TGATTCTGCATGTTAAAGTC+TGG | + | chr6_1:92627384-92627403 | None:intergenic | 35.0% | |
| TAACATGCAGAATCAACAAG+AGG | - | chr6_1:92627389-92627408 | Msa0898500:intron | 35.0% | |
| CAACAAGAGGTAAGTGTTAT+AGG | - | chr6_1:92627402-92627421 | Msa0898500:intron | 35.0% | |
| GTTATAGGAGCAATTCTCTT+TGG | - | chr6_1:92627417-92627436 | Msa0898500:intron | 35.0% | |
| CGAACTATTCATGATAGTAG+AGG | - | chr6_1:92627482-92627501 | Msa0898500:intron | 35.0% | |
| GTAGAGGGAAAAAAGATTTC+AGG | - | chr6_1:92627498-92627517 | Msa0898500:intron | 35.0% | |
| TAGGGGAAAAGTAAGAAAGA+AGG | + | chr6_1:92627752-92627771 | None:intergenic | 35.0% | |
| GGCAAATTGTGCAGATAAAA+CGG | - | chr6_1:92627798-92627817 | Msa0898500:CDS | 35.0% | |
| TGAGGAAGACTTTCTAGATT+TGG | - | chr6_1:92627867-92627886 | Msa0898500:intron | 35.0% | |
| TTCCAAGCTAAAAGAGAAAG+AGG | - | chr6_1:92627891-92627910 | Msa0898500:intron | 35.0% | |
| !! | TACCTCTTTCTCTTTTAGCT+TGG | + | chr6_1:92627896-92627915 | None:intergenic | 35.0% |
| TTCTCAATAAGTTCATCGAC+CGG | + | chr6_1:92628202-92628221 | None:intergenic | 35.0% | |
| !! | ATAACAATTCTAGCCTTGCT+TGG | - | chr6_1:92628318-92628337 | Msa0898500:intron | 35.0% |
| !! | TAACAATTCTAGCCTTGCTT+GGG | - | chr6_1:92628319-92628338 | Msa0898500:intron | 35.0% |
| CTTATCTGGGTTATGAATCA+AGG | + | chr6_1:92628356-92628375 | None:intergenic | 35.0% | |
| CTTGATTCATAACCCAGATA+AGG | - | chr6_1:92628354-92628373 | Msa0898500:intron | 35.0% | |
| TGTGTGGCTTATATCTTTGA+TGG | - | chr6_1:92628493-92628512 | Msa0898500:intron | 35.0% | |
| !!! | TGATTTTTTCTGTTGCAGAG+TGG | - | chr6_1:92628558-92628577 | Msa0898500:CDS | 35.0% |
| ATAGTTCTTGATGCCTCATT+TGG | + | chr6_1:92628763-92628782 | None:intergenic | 35.0% | |
| ! | GGCATCAAGAACTATTTTGT+TGG | - | chr6_1:92628768-92628787 | Msa0898500:CDS | 35.0% |
| CTCCAACAACAGTTATACTA+AGG | + | chr6_1:92627097-92627116 | None:intergenic | 35.0% | |
| TACTATCACAATTCAGACCT+CGG | + | chr6_1:92627190-92627209 | None:intergenic | 35.0% | |
| TGATTCTGCATGTTAAAGTC+TGG | + | chr6_1:92627384-92627403 | None:intergenic | 35.0% | |
| TAACATGCAGAATCAACAAG+AGG | - | chr6_1:92627389-92627408 | Msa0898500:intron | 35.0% | |
| CAACAAGAGGTAAGTGTTAT+AGG | - | chr6_1:92627402-92627421 | Msa0898500:intron | 35.0% | |
| GTTATAGGAGCAATTCTCTT+TGG | - | chr6_1:92627417-92627436 | Msa0898500:intron | 35.0% | |
| CGAACTATTCATGATAGTAG+AGG | - | chr6_1:92627482-92627501 | Msa0898500:intron | 35.0% | |
| GTAGAGGGAAAAAAGATTTC+AGG | - | chr6_1:92627498-92627517 | Msa0898500:intron | 35.0% | |
| TAGGGGAAAAGTAAGAAAGA+AGG | + | chr6_1:92627752-92627771 | None:intergenic | 35.0% | |
| GGCAAATTGTGCAGATAAAA+CGG | - | chr6_1:92627798-92627817 | Msa0898500:CDS | 35.0% | |
| TGAGGAAGACTTTCTAGATT+TGG | - | chr6_1:92627867-92627886 | Msa0898500:intron | 35.0% | |
| TTCCAAGCTAAAAGAGAAAG+AGG | - | chr6_1:92627891-92627910 | Msa0898500:intron | 35.0% | |
| !! | TACCTCTTTCTCTTTTAGCT+TGG | + | chr6_1:92627896-92627915 | None:intergenic | 35.0% |
| TTCTCAATAAGTTCATCGAC+CGG | + | chr6_1:92628202-92628221 | None:intergenic | 35.0% | |
| !! | ATAACAATTCTAGCCTTGCT+TGG | - | chr6_1:92628318-92628337 | Msa0898500:intron | 35.0% |
| !! | TAACAATTCTAGCCTTGCTT+GGG | - | chr6_1:92628319-92628338 | Msa0898500:intron | 35.0% |
| CTTATCTGGGTTATGAATCA+AGG | + | chr6_1:92628356-92628375 | None:intergenic | 35.0% | |
| CTTGATTCATAACCCAGATA+AGG | - | chr6_1:92628354-92628373 | Msa0898500:intron | 35.0% | |
| TGTGTGGCTTATATCTTTGA+TGG | - | chr6_1:92628493-92628512 | Msa0898500:intron | 35.0% | |
| !!! | TGATTTTTTCTGTTGCAGAG+TGG | - | chr6_1:92628558-92628577 | Msa0898500:CDS | 35.0% |
| ATAGTTCTTGATGCCTCATT+TGG | + | chr6_1:92628763-92628782 | None:intergenic | 35.0% | |
| ! | GGCATCAAGAACTATTTTGT+TGG | - | chr6_1:92628768-92628787 | Msa0898500:CDS | 35.0% |
| TATACTAAGGTTGGATCCTG+TGG | + | chr6_1:92627084-92627103 | None:intergenic | 40.0% | |
| ! | ATAACTGTTGTTGGAGCATC+TGG | - | chr6_1:92627101-92627120 | Msa0898500:three_prime_UTR | 40.0% |
| ! | TAGAAAAGAGCAAAGAGTGC+TGG | + | chr6_1:92627153-92627172 | None:intergenic | 40.0% |
| ACTATCACAATTCAGACCTC+GGG | + | chr6_1:92627189-92627208 | None:intergenic | 40.0% | |
| !!! | GATTTTCAAGTGCATGTGGA+TGG | + | chr6_1:92627583-92627602 | None:intergenic | 40.0% |
| AGAGAAAGAGGTAATGCTTG+AGG | - | chr6_1:92627903-92627922 | Msa0898500:intron | 40.0% | |
| TAAGATGATTACCGGTGATC+AGG | - | chr6_1:92628072-92628091 | Msa0898500:intron | 40.0% | |
| TGATCAGGTCTGTATTGGAA+AGG | - | chr6_1:92628087-92628106 | Msa0898500:intron | 40.0% | |
| GTCTGTATTGGAAAGGAAAC+TGG | - | chr6_1:92628094-92628113 | Msa0898500:intron | 40.0% | |
| GGTCGATGAACTTATTGAGA+AGG | - | chr6_1:92628201-92628220 | Msa0898500:intron | 40.0% | |
| GAACTTATTGAGAAGGCTGA+TGG | - | chr6_1:92628208-92628227 | Msa0898500:intron | 40.0% | |
| GACAAACTATTTCCCAAGCA+AGG | + | chr6_1:92628334-92628353 | None:intergenic | 40.0% | |
| TCATAACCCAGATAAGGTCA+AGG | - | chr6_1:92628360-92628379 | Msa0898500:intron | 40.0% | |
| CATTTGCCTTGACCTTATCT+GGG | + | chr6_1:92628369-92628388 | None:intergenic | 40.0% | |
| GCACTCAATTCATAGAAGCA+TGG | - | chr6_1:92628417-92628436 | Msa0898500:intron | 40.0% | |
| !! | GCATGGCTCTAATAAGATAC+TGG | - | chr6_1:92628434-92628453 | Msa0898500:intron | 40.0% |
| TGGAAAATACTAAGCAGAGG+AGG | + | chr6_1:92628743-92628762 | None:intergenic | 40.0% | |
| TATACTAAGGTTGGATCCTG+TGG | + | chr6_1:92627084-92627103 | None:intergenic | 40.0% | |
| ! | ATAACTGTTGTTGGAGCATC+TGG | - | chr6_1:92627101-92627120 | Msa0898500:three_prime_UTR | 40.0% |
| ! | TAGAAAAGAGCAAAGAGTGC+TGG | + | chr6_1:92627153-92627172 | None:intergenic | 40.0% |
| ACTATCACAATTCAGACCTC+GGG | + | chr6_1:92627189-92627208 | None:intergenic | 40.0% | |
| !!! | GATTTTCAAGTGCATGTGGA+TGG | + | chr6_1:92627583-92627602 | None:intergenic | 40.0% |
| AGAGAAAGAGGTAATGCTTG+AGG | - | chr6_1:92627903-92627922 | Msa0898500:intron | 40.0% | |
| TAAGATGATTACCGGTGATC+AGG | - | chr6_1:92628072-92628091 | Msa0898500:intron | 40.0% | |
| TGATCAGGTCTGTATTGGAA+AGG | - | chr6_1:92628087-92628106 | Msa0898500:intron | 40.0% | |
| GTCTGTATTGGAAAGGAAAC+TGG | - | chr6_1:92628094-92628113 | Msa0898500:intron | 40.0% | |
| GGTCGATGAACTTATTGAGA+AGG | - | chr6_1:92628201-92628220 | Msa0898500:intron | 40.0% | |
| GAACTTATTGAGAAGGCTGA+TGG | - | chr6_1:92628208-92628227 | Msa0898500:intron | 40.0% | |
| GACAAACTATTTCCCAAGCA+AGG | + | chr6_1:92628334-92628353 | None:intergenic | 40.0% | |
| TCATAACCCAGATAAGGTCA+AGG | - | chr6_1:92628360-92628379 | Msa0898500:intron | 40.0% | |
| CATTTGCCTTGACCTTATCT+GGG | + | chr6_1:92628369-92628388 | None:intergenic | 40.0% | |
| GCACTCAATTCATAGAAGCA+TGG | - | chr6_1:92628417-92628436 | Msa0898500:intron | 40.0% | |
| !! | GCATGGCTCTAATAAGATAC+TGG | - | chr6_1:92628434-92628453 | Msa0898500:intron | 40.0% |
| TGGAAAATACTAAGCAGAGG+AGG | + | chr6_1:92628743-92628762 | None:intergenic | 40.0% | |
| TTGTCAGACTCTGAATCCAC+AGG | - | chr6_1:92627065-92627084 | Msa0898500:three_prime_UTR | 45.0% | |
| ! | CTATGAAGATTGGTTACCCG+AGG | - | chr6_1:92627170-92627189 | Msa0898500:three_prime_UTR | 45.0% |
| !!! | AGGGGATTTTCAAGTGCATG+TGG | + | chr6_1:92627587-92627606 | None:intergenic | 45.0% |
| AAGTCTTCCTCAGAGCTGTA+CGG | + | chr6_1:92627859-92627878 | None:intergenic | 45.0% | |
| TCCAATACAGACCTGATCAC+CGG | + | chr6_1:92628086-92628105 | None:intergenic | 45.0% | |
| TCAATAAGTTCATCGACCGG+AGG | + | chr6_1:92628199-92628218 | None:intergenic | 45.0% | |
| !! | GAGAAGGCTGATGGATTTGT+TGG | - | chr6_1:92628217-92628236 | Msa0898500:intron | 45.0% |
| GCATTTGCCTTGACCTTATC+TGG | + | chr6_1:92628370-92628389 | None:intergenic | 45.0% | |
| ! | GAAATATGGCGTTGAGCAGT+AGG | - | chr6_1:92628603-92628622 | Msa0898500:intron | 45.0% |
| GTTCTATAGAGTGCATGAGC+AGG | + | chr6_1:92628643-92628662 | None:intergenic | 45.0% | |
| TTGTCAGACTCTGAATCCAC+AGG | - | chr6_1:92627065-92627084 | Msa0898500:three_prime_UTR | 45.0% | |
| ! | CTATGAAGATTGGTTACCCG+AGG | - | chr6_1:92627170-92627189 | Msa0898500:three_prime_UTR | 45.0% |
| !!! | AGGGGATTTTCAAGTGCATG+TGG | + | chr6_1:92627587-92627606 | None:intergenic | 45.0% |
| AAGTCTTCCTCAGAGCTGTA+CGG | + | chr6_1:92627859-92627878 | None:intergenic | 45.0% | |
| TCCAATACAGACCTGATCAC+CGG | + | chr6_1:92628086-92628105 | None:intergenic | 45.0% | |
| TCAATAAGTTCATCGACCGG+AGG | + | chr6_1:92628199-92628218 | None:intergenic | 45.0% | |
| !! | GAGAAGGCTGATGGATTTGT+TGG | - | chr6_1:92628217-92628236 | Msa0898500:intron | 45.0% |
| GCATTTGCCTTGACCTTATC+TGG | + | chr6_1:92628370-92628389 | None:intergenic | 45.0% | |
| ! | GAAATATGGCGTTGAGCAGT+AGG | - | chr6_1:92628603-92628622 | Msa0898500:intron | 45.0% |
| GTTCTATAGAGTGCATGAGC+AGG | + | chr6_1:92628643-92628662 | None:intergenic | 45.0% | |
| TTCTTGTCCGTACAGCTCTG+AGG | - | chr6_1:92627849-92627868 | Msa0898500:intron | 50.0% | |
| ACCGGTGATCAGGTCTGTAT+TGG | - | chr6_1:92628082-92628101 | Msa0898500:intron | 50.0% | |
| TTGGAAAGGAAACTGGTCGC+AGG | - | chr6_1:92628101-92628120 | Msa0898500:intron | 50.0% | |
| TATCCATCATCCTCCCTCCT+TGG | - | chr6_1:92628145-92628164 | Msa0898500:intron | 50.0% | |
| ATCCTTGTGCTTGCCAAGGA+GGG | + | chr6_1:92628161-92628180 | None:intergenic | 50.0% | |
| ATGCATCCTTGTGCTTGCCA+AGG | + | chr6_1:92628165-92628184 | None:intergenic | 50.0% | |
| !! | TGCATCGATTGCTTCACCTC+CGG | - | chr6_1:92628180-92628199 | Msa0898500:intron | 50.0% |
| !! | GGATTTGTTGGTGTCTTCCC+TGG | - | chr6_1:92628229-92628248 | Msa0898500:intron | 50.0% |
| TTCTTGTCCGTACAGCTCTG+AGG | - | chr6_1:92627849-92627868 | Msa0898500:intron | 50.0% | |
| ACCGGTGATCAGGTCTGTAT+TGG | - | chr6_1:92628082-92628101 | Msa0898500:intron | 50.0% | |
| TTGGAAAGGAAACTGGTCGC+AGG | - | chr6_1:92628101-92628120 | Msa0898500:intron | 50.0% | |
| TATCCATCATCCTCCCTCCT+TGG | - | chr6_1:92628145-92628164 | Msa0898500:intron | 50.0% | |
| ATCCTTGTGCTTGCCAAGGA+GGG | + | chr6_1:92628161-92628180 | None:intergenic | 50.0% | |
| ATGCATCCTTGTGCTTGCCA+AGG | + | chr6_1:92628165-92628184 | None:intergenic | 50.0% | |
| !! | TGCATCGATTGCTTCACCTC+CGG | - | chr6_1:92628180-92628199 | Msa0898500:intron | 50.0% |
| !! | GGATTTGTTGGTGTCTTCCC+TGG | - | chr6_1:92628229-92628248 | Msa0898500:intron | 50.0% |
| AAGGAAACTGGTCGCAGGCT+CGG | - | chr6_1:92628106-92628125 | Msa0898500:intron | 55.0% | |
| TTGCCAAGGAGGGAGGATGA+TGG | + | chr6_1:92628151-92628170 | None:intergenic | 55.0% | |
| CATCCTTGTGCTTGCCAAGG+AGG | + | chr6_1:92628162-92628181 | None:intergenic | 55.0% | |
| ! | GGCGTTGAGCAGTAGGATAC+TGG | - | chr6_1:92628610-92628629 | Msa0898500:intron | 55.0% |
| AAGGAAACTGGTCGCAGGCT+CGG | - | chr6_1:92628106-92628125 | Msa0898500:intron | 55.0% | |
| TTGCCAAGGAGGGAGGATGA+TGG | + | chr6_1:92628151-92628170 | None:intergenic | 55.0% | |
| CATCCTTGTGCTTGCCAAGG+AGG | + | chr6_1:92628162-92628181 | None:intergenic | 55.0% | |
| ! | GGCGTTGAGCAGTAGGATAC+TGG | - | chr6_1:92628610-92628629 | Msa0898500:intron | 55.0% |
| GGCTGCAATGGTGGCTGCAA+TGG | - | chr6_1:92627032-92627051 | Msa0898500:three_prime_UTR | 60.0% | |
| CTTGTGCTTGCCAAGGAGGG+AGG | + | chr6_1:92628158-92628177 | None:intergenic | 60.0% | |
| CTCCCTCCTTGGCAAGCACA+AGG | - | chr6_1:92628156-92628175 | Msa0898500:intron | 60.0% | |
| GGCTGCAATGGTGGCTGCAA+TGG | - | chr6_1:92627032-92627051 | Msa0898500:three_prime_UTR | 60.0% | |
| CTTGTGCTTGCCAAGGAGGG+AGG | + | chr6_1:92628158-92628177 | None:intergenic | 60.0% | |
| CTCCCTCCTTGGCAAGCACA+AGG | - | chr6_1:92628156-92628175 | Msa0898500:intron | 60.0% | |
| AACTGGTCGCAGGCTCGGCA+TGG | - | chr6_1:92628111-92628130 | Msa0898500:intron | 65.0% | |
| ACTGGTCGCAGGCTCGGCAT+GGG | - | chr6_1:92628112-92628131 | Msa0898500:intron | 65.0% | |
| AACTGGTCGCAGGCTCGGCA+TGG | - | chr6_1:92628111-92628130 | Msa0898500:intron | 65.0% | |
| ACTGGTCGCAGGCTCGGCAT+GGG | - | chr6_1:92628112-92628131 | Msa0898500:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 92627030 | 92628892 | 92627030 | ID=Msa0898500;Name=Msa0898500 |
| chr6_1 | mRNA | 92627030 | 92628892 | 92627030 | ID=Msa0898500-mRNA-1;Parent=Msa0898500;Name=Msa0898500-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.33|0.28|1|0.66|0.85|7|292|177 |
| chr6_1 | exon | 92627030 | 92627346 | 92627030 | ID=Msa0898500-mRNA-1:exon:15639;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92627614 | 92627828 | 92627614 | ID=Msa0898500-mRNA-1:exon:15638;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92628010 | 92628058 | 92628010 | ID=Msa0898500-mRNA-1:exon:15637;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92628180 | 92628185 | 92628180 | ID=Msa0898500-mRNA-1:exon:15636;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92628512 | 92628606 | 92628512 | ID=Msa0898500-mRNA-1:exon:15635;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92628731 | 92628805 | 92628731 | ID=Msa0898500-mRNA-1:exon:15634;Parent=Msa0898500-mRNA-1 |
| chr6_1 | exon | 92628824 | 92628892 | 92628824 | ID=Msa0898500-mRNA-1:exon:15633;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92628824 | 92628892 | 92628824 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92628731 | 92628805 | 92628731 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92628512 | 92628606 | 92628512 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92628180 | 92628185 | 92628180 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92628010 | 92628058 | 92628010 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92627614 | 92627828 | 92627614 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | CDS | 92627322 | 92627346 | 92627322 | ID=Msa0898500-mRNA-1:cds;Parent=Msa0898500-mRNA-1 |
| chr6_1 | three_prime_UTR | 92627030 | 92627321 | 92627030 | ID=Msa0898500-mRNA-1:three_prime_utr;Parent=Msa0898500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
