Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028200 | XP_004492754.1 | 85.448 | 268 | 16 | 2 | 1 | 245 | 10 | 277 | 4.30e-160 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028200 | A0A1S2XQ17 | 85.448 | 268 | 16 | 2 | 1 | 245 | 10 | 277 | 2.05e-160 | 454 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028200 | Msa1066950 | 0.825828 | 3.787744e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028200 | MtrunA17_Chr7g0247901 | 87.687 | 268 | 10 | 2 | 1 | 245 | 1 | 268 | 5.34e-160 | 444 |
| Msa1028200 | MtrunA17_Chr7g0247911 | 73.507 | 268 | 48 | 2 | 1 | 245 | 1 | 268 | 3.24e-131 | 371 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028200 | AT2G45990.2 | 73.881 | 268 | 47 | 2 | 1 | 245 | 1 | 268 | 4.44e-137 | 386 |
| Msa1028200 | AT2G45990.1 | 73.881 | 268 | 47 | 2 | 1 | 245 | 1 | 268 | 4.44e-137 | 386 |
| Msa1028200 | AT2G45990.3 | 71.642 | 268 | 48 | 3 | 1 | 245 | 1 | 263 | 1.66e-129 | 367 |
| Msa1028200 | AT2G45990.4 | 71.429 | 210 | 37 | 2 | 1 | 187 | 1 | 210 | 1.37e-98 | 286 |
Find 76 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTATTGTTTCTATTATT+TGG | -0.002985 | 7_1:+60845039 | Msa1028200:three_prime_UTR |
| ATAAACATTATAAAAGTTTC+TGG | 0.149611 | 7_1:+60844964 | Msa1028200:three_prime_UTR |
| CTTCCTGATGGACGGGATTC+TGG | 0.242508 | 7_1:-60842892 | None:intergenic |
| CCCCATTCTTCCATAATAAT+AGG | 0.262053 | 7_1:-60843112 | None:intergenic |
| GAGCTGAAGAACTTGAATTC+TGG | 0.278098 | 7_1:-60844850 | None:intergenic |
| TCTTATTGTTTCTATTATTT+GGG | 0.282656 | 7_1:+60845040 | Msa1028200:three_prime_UTR |
| GACTGTTTGGATCAGGGAAT+TGG | 0.297891 | 7_1:+60844784 | Msa1028200:intron |
| CAAGTTGAAGCCTATTATTA+TGG | 0.320716 | 7_1:+60843102 | Msa1028200:CDS |
| GCTTGCCGTTGAGGGTATAT+TGG | 0.326642 | 7_1:+60843069 | Msa1028200:CDS |
| AAGAGAAATAAGGGAATGTT+TGG | 0.332914 | 7_1:+60841411 | None:intergenic |
| GCAACAACCTCACAAGTAAA+AGG | 0.335676 | 7_1:-60842863 | None:intergenic |
| ACTGTTTGGATCAGGGAATT+GGG | 0.342469 | 7_1:+60844785 | Msa1028200:intron |
| AGCTGAAGAACTTGAATTCT+GGG | 0.349248 | 7_1:-60844849 | None:intergenic |
| GGAAGAATGGGGTGAGAATA+GGG | 0.356927 | 7_1:+60843123 | Msa1028200:CDS |
| AGATGGCCTGGTTTGTTTGA+TGG | 0.357614 | 7_1:+60841764 | Msa1028200:CDS |
| GCCTATTATTATGGAAGAAT+GGG | 0.363331 | 7_1:+60843111 | Msa1028200:CDS |
| GATGGCCTGGTTTGTTTGAT+GGG | 0.365167 | 7_1:+60841765 | Msa1028200:CDS |
| TGCTTTAGAATTTCTACCTT+GGG | 0.372680 | 7_1:-60844420 | None:intergenic |
| GCCTGGTTTGTTTGATGGGG+TGG | 0.377494 | 7_1:+60841769 | Msa1028200:CDS |
| TGGAAGAATGGGGTGAGAAT+AGG | 0.377537 | 7_1:+60843122 | Msa1028200:CDS |
| GTGCGACCGGTAGTGGAAAC+TGG | 0.384499 | 7_1:+60842831 | Msa1028200:CDS |
| AGGATATATGGTCTGGGCAC+TGG | 0.391773 | 7_1:+60844289 | Msa1028200:CDS |
| GCTTTACTTCGAGAGCTTGC+TGG | 0.393073 | 7_1:+60844247 | Msa1028200:CDS |
| AGTGTCAGCCCTTGGTGCTC+TGG | 0.397313 | 7_1:-60844456 | None:intergenic |
| AAGCAGGAGGAAAGTGAAAT+GGG | 0.399654 | 7_1:+60841471 | Msa1028200:exon |
| AAAGCAGGAGGAAAGTGAAA+TGG | 0.400941 | 7_1:+60841470 | Msa1028200:exon |
| ATACCATCTGAAAGGATATA+TGG | 0.402764 | 7_1:+60844277 | Msa1028200:CDS |
| ATCTGAAAGGATATATGGTC+TGG | 0.415001 | 7_1:+60844282 | Msa1028200:CDS |
| AGCCTATTATTATGGAAGAA+TGG | 0.416134 | 7_1:+60843110 | Msa1028200:CDS |
| AATGGGAGAGCTTTACGCTT+TGG | 0.417877 | 7_1:+60841488 | Msa1028200:exon |
| TGGATTCAGCTACAGAAGAT+TGG | 0.424674 | 7_1:+60841789 | Msa1028200:CDS |
| GCAGAGGGGCTTGCCGTTGA+GGG | 0.442318 | 7_1:+60843061 | Msa1028200:CDS |
| TGCAGAGGGGCTTGCCGTTG+AGG | 0.456207 | 7_1:+60843060 | Msa1028200:CDS |
| TTCTTGTGCAAGGTTGCAGA+GGG | 0.462379 | 7_1:+60843046 | Msa1028200:intron |
| TTGGAAAGGTCAGGGATGAA+TGG | 0.464231 | 7_1:+60843164 | Msa1028200:CDS |
| AGACCAGAATCCCGTCCATC+AGG | 0.465645 | 7_1:+60842889 | Msa1028200:CDS |
| CATAATAATAGGCTTCAACT+TGG | 0.480574 | 7_1:-60843101 | None:intergenic |
| ATATATCCTTTCAGATGGTA+TGG | 0.488726 | 7_1:-60844275 | None:intergenic |
| GAAGTAAAGCATCAGCAAAT+CGG | 0.489034 | 7_1:-60844234 | None:intergenic |
| GACAAATGGAATTTGTATCT+AGG | 0.490531 | 7_1:+60844651 | Msa1028200:CDS |
| CTGCTTTAGAATTTCTACCT+TGG | 0.490956 | 7_1:-60844421 | None:intergenic |
| CCCGTCCATCAGGAAGTCTT+CGG | 0.498127 | 7_1:+60842899 | Msa1028200:CDS |
| TCATATCCAGTTTCCACTAC+CGG | 0.499546 | 7_1:-60842837 | None:intergenic |
| AAGCTCTCTCTCTGCTCTCA+AGG | 0.502315 | 7_1:+60841545 | Msa1028200:CDS |
| CTTACTGCAGTGTCAGCCCT+TGG | 0.503169 | 7_1:-60844464 | None:intergenic |
| GCTGCTAAAGTGAGATGGCC+TGG | 0.506629 | 7_1:+60841752 | Msa1028200:CDS |
| GGATATATGGTCTGGGCACT+GGG | 0.512731 | 7_1:+60844290 | Msa1028200:CDS |
| AAGAGCCTGAGTTAGACAAA+TGG | 0.518838 | 7_1:+60844637 | Msa1028200:CDS |
| CAGGGATGAATGGTTGGAGC+AGG | 0.519721 | 7_1:+60843174 | Msa1028200:CDS |
| CCGAAGACTTCCTGATGGAC+GGG | 0.520288 | 7_1:-60842899 | None:intergenic |
| TGCAGGCTGCTAAAGTGAGA+TGG | 0.526179 | 7_1:+60841747 | Msa1028200:intron |
| TTGTTCATGTCAGGTGCGAC+CGG | 0.526998 | 7_1:+60842818 | Msa1028200:intron |
| AAATTCCATTTGTCTAACTC+AGG | 0.529607 | 7_1:-60844642 | None:intergenic |
| CAACACTGCACAGGAGAAAG+AGG | 0.532803 | 7_1:+60844812 | Msa1028200:CDS |
| TAACCAGCTTTGTTGAGGAT+CGG | 0.537039 | 7_1:+60844589 | Msa1028200:intron |
| TTGAGGGTATATTGGAGAGT+TGG | 0.538203 | 7_1:+60843077 | Msa1028200:CDS |
| CTGTTTGGATCAGGGAATTG+GGG | 0.541882 | 7_1:+60844786 | Msa1028200:intron |
| ATGGCCTGGTTTGTTTGATG+GGG | 0.541966 | 7_1:+60841766 | Msa1028200:CDS |
| ACCGAAGACTTCCTGATGGA+CGG | 0.543391 | 7_1:-60842900 | None:intergenic |
| GTTCTTGTGCAAGGTTGCAG+AGG | 0.550341 | 7_1:+60843045 | Msa1028200:intron |
| AAAGGTCAGGGATGAATGGT+TGG | 0.557400 | 7_1:+60843168 | Msa1028200:CDS |
| CTTTACGCTTTGGACTTCGA+TGG | 0.561411 | 7_1:+60841498 | Msa1028200:CDS |
| TCTGAAAGGATATATGGTCT+GGG | 0.569992 | 7_1:+60844283 | Msa1028200:CDS |
| AAAAGAGACCAGAGCACCAA+GGG | 0.580694 | 7_1:+60844448 | Msa1028200:CDS |
| TTTGCATATAGAATATATCC+TGG | 0.584877 | 7_1:+60844039 | Msa1028200:intron |
| ACCCACCGAAGACTTCCTGA+TGG | 0.599827 | 7_1:-60842904 | None:intergenic |
| AGACCATATATCCTTTCAGA+TGG | 0.605552 | 7_1:-60844280 | None:intergenic |
| GAGTAACCATACCATCTGAA+AGG | 0.613779 | 7_1:+60844269 | Msa1028200:CDS |
| TCCACCCCATCAAACAAACC+AGG | 0.626332 | 7_1:-60841770 | None:intergenic |
| ACTCTCCAATATACCCTCAA+CGG | 0.634212 | 7_1:-60843074 | None:intergenic |
| TTGGGGTTACAACACTGCAC+AGG | 0.634972 | 7_1:+60844803 | Msa1028200:CDS |
| GCTGAAGAACTTGAATTCTG+GGG | 0.646930 | 7_1:-60844848 | None:intergenic |
| CCTATTATTATGGAAGAATG+GGG | 0.658487 | 7_1:+60843112 | Msa1028200:CDS |
| CAAAAGAGACCAGAGCACCA+AGG | 0.667405 | 7_1:+60844447 | Msa1028200:CDS |
| GGAGTCATCTGTGATAGCTG+CGG | 0.668448 | 7_1:+60841519 | Msa1028200:CDS |
| TCTTGTGCAAGGTTGCAGAG+GGG | 0.704898 | 7_1:+60843047 | Msa1028200:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTATTATAATAATAAG+GGG | + | chr7_1:60842222-60842241 | Msa1028200:intron | 10.0% |
| !!! | AACTTTTATAATGTTTATAA+AGG | - | chr7_1:60844962-60844981 | None:intergenic | 10.0% |
| !! | TTGAATTGAATTTATTTACT+CGG | + | chr7_1:60842023-60842042 | Msa1028200:intron | 15.0% |
| !! | AGTGCAAAAAAATATTATAA+TGG | + | chr7_1:60842267-60842286 | Msa1028200:intron | 15.0% |
| !!! | ATTTTAGGAGATATTTTTAT+AGG | + | chr7_1:60842339-60842358 | Msa1028200:intron | 15.0% |
| !!! | TTTTAGGAGATATTTTTATA+GGG | + | chr7_1:60842340-60842359 | Msa1028200:intron | 15.0% |
| !! | TGACTTCTAATTATAAAATA+AGG | + | chr7_1:60842462-60842481 | Msa1028200:intron | 15.0% |
| !! | AATTATAAAATAAGGCAATT+TGG | + | chr7_1:60842470-60842489 | Msa1028200:intron | 15.0% |
| !!! | AATTTCATGAAATATTTTAC+TGG | + | chr7_1:60842671-60842690 | Msa1028200:intron | 15.0% |
| !! | TTAGTATTAAGAAAAATAAG+AGG | + | chr7_1:60844181-60844200 | Msa1028200:intron | 15.0% |
| !! | TAGTATTAAGAAAAATAAGA+GGG | + | chr7_1:60844182-60844201 | Msa1028200:intron | 15.0% |
| !! | ATAAACATTATAAAAGTTTC+TGG | + | chr7_1:60844964-60844983 | Msa1028200:three_prime_UTR | 15.0% |
| !!! | ATCTTATTGTTTCTATTATT+TGG | + | chr7_1:60845039-60845058 | Msa1028200:three_prime_UTR | 15.0% |
| !!! | TCTTATTGTTTCTATTATTT+GGG | + | chr7_1:60845040-60845059 | Msa1028200:three_prime_UTR | 15.0% |
| !!! | TTATGTATATTACTTTTGAT+AGG | + | chr7_1:60845094-60845113 | Msa1028200:three_prime_UTR | 15.0% |
| !!! | TTCAATGTCAAAACAATTTT+TGG | + | chr7_1:60841621-60841640 | Msa1028200:intron | 20.0% |
| !!! | TCAATGTCAAAACAATTTTT+GGG | + | chr7_1:60841622-60841641 | Msa1028200:intron | 20.0% |
| !!! | TTTTCAATCTTTTCTTATGT+TGG | + | chr7_1:60841671-60841690 | Msa1028200:intron | 20.0% |
| !!! | ATTTGTTTGAAATTTTTTGC+AGG | + | chr7_1:60841730-60841749 | Msa1028200:intron | 20.0% |
| !! | TCCTAAAATACATAATCATA+GGG | - | chr7_1:60842328-60842347 | None:intergenic | 20.0% |
| !! | ATATGTTTGAAGATATTCAA+TGG | - | chr7_1:60842716-60842735 | None:intergenic | 20.0% |
| !!! | AATAGGTTTTTATTTGGATA+TGG | - | chr7_1:60843801-60843820 | None:intergenic | 20.0% |
| !!! | CCATTTAATAGGTTTTTATT+TGG | - | chr7_1:60843807-60843826 | None:intergenic | 20.0% |
| !! | CCAAATAAAAACCTATTAAA+TGG | + | chr7_1:60843804-60843823 | Msa1028200:intron | 20.0% |
| !! | TTTGGAAAAAAAATCTTGTT+TGG | - | chr7_1:60843840-60843859 | None:intergenic | 20.0% |
| !!! | AAACCAAGTTTTTGTTAATT+CGG | - | chr7_1:60843864-60843883 | None:intergenic | 20.0% |
| !! | AATTAACAAAAACTTGGTTT+CGG | + | chr7_1:60843864-60843883 | Msa1028200:intron | 20.0% |
| !! | GATGATTTCCTATTATTAAT+TGG | + | chr7_1:60844010-60844029 | Msa1028200:intron | 20.0% |
| !! | AGTATTAAGAAAAATAAGAG+GGG | + | chr7_1:60844183-60844202 | Msa1028200:intron | 20.0% |
| !!! | TTACTTTTGATAGGATAAAT+TGG | + | chr7_1:60845103-60845122 | Msa1028200:three_prime_UTR | 20.0% |
| !! | TTTTCTTATGTTGGAATTCA+TGG | + | chr7_1:60841680-60841699 | Msa1028200:intron | 25.0% |
| !! | TATTTAGTTTCAGCTGTTAT+TGG | + | chr7_1:60841855-60841874 | Msa1028200:intron | 25.0% |
| !! | ACTATGTATGTAGATACTTT+TGG | + | chr7_1:60842087-60842106 | Msa1028200:intron | 25.0% |
| !! | GATACTTTTGGATGAATTTT+AGG | + | chr7_1:60842099-60842118 | Msa1028200:intron | 25.0% |
| !! | ACCCTATGATTATGTATTTT+AGG | + | chr7_1:60842324-60842343 | Msa1028200:intron | 25.0% |
| ! | CTCCTAAAATACATAATCAT+AGG | - | chr7_1:60842329-60842348 | None:intergenic | 25.0% |
| !! | TTTTATAGGGAAATGTTAGT+AGG | + | chr7_1:60842353-60842372 | Msa1028200:intron | 25.0% |
| ! | TAGTGATTATGTTAGATATC+AGG | + | chr7_1:60842377-60842396 | Msa1028200:intron | 25.0% |
| ! | AGTGATTATGTTAGATATCA+GGG | + | chr7_1:60842378-60842397 | Msa1028200:intron | 25.0% |
| !!! | CTTTTTTCAATAGTGAGTTA+AGG | - | chr7_1:60842428-60842447 | None:intergenic | 25.0% |
| !! | AAATAAGGCAATTTGGATTT+TGG | + | chr7_1:60842477-60842496 | Msa1028200:intron | 25.0% |
| ! | AAATTCAACAGTTTGAATGA+AGG | - | chr7_1:60842656-60842675 | None:intergenic | 25.0% |
| !! | CATATATTTCTATTGCCAAA+TGG | + | chr7_1:60842755-60842774 | Msa1028200:intron | 25.0% |
| ! | TTTATATAGTTGTTCATGTC+AGG | + | chr7_1:60842809-60842828 | Msa1028200:intron | 25.0% |
| ! | AATGAGAAAAAATGAGGTAT+AGG | - | chr7_1:60842936-60842955 | None:intergenic | 25.0% |
| ! | GTAGTTAATGAGAAAAAATG+AGG | - | chr7_1:60842942-60842961 | None:intergenic | 25.0% |
| ! | AAAAATTATTCCTCTGTCAA+GGG | - | chr7_1:60843241-60843260 | None:intergenic | 25.0% |
| ! | TAAAAATTATTCCTCTGTCA+AGG | - | chr7_1:60843242-60843261 | None:intergenic | 25.0% |
| !!! | TGGTTTGGTTTTTAAAACAT+TGG | + | chr7_1:60843436-60843455 | Msa1028200:intron | 25.0% |
| !! | ATTATTTTCCTTTCTGTTCA+AGG | + | chr7_1:60843626-60843645 | Msa1028200:intron | 25.0% |
| ! | ACTAGATAATGTCATTAGTT+TGG | + | chr7_1:60843717-60843736 | Msa1028200:intron | 25.0% |
| !!! | GTTTTTATTTGGATATGGTT+AGG | - | chr7_1:60843796-60843815 | None:intergenic | 25.0% |
| ! | GCTAATCTAATCCATTTAAT+AGG | - | chr7_1:60843818-60843837 | None:intergenic | 25.0% |
| !! | AGTTTTTGTTAATTCGGTTT+TGG | - | chr7_1:60843858-60843877 | None:intergenic | 25.0% |
| ! | AAACCGAATTAACAAAAACT+TGG | + | chr7_1:60843858-60843877 | Msa1028200:intron | 25.0% |
| ! | AAGCATCACCAATTAATAAT+AGG | - | chr7_1:60844021-60844040 | None:intergenic | 25.0% |
| ! | TTTGCATATAGAATATATCC+TGG | + | chr7_1:60844039-60844058 | Msa1028200:intron | 25.0% |
| ! | ATTAAAATTTGCAAGCTCAA+GGG | + | chr7_1:60844074-60844093 | Msa1028200:intron | 25.0% |
| ! | CAAAGCTGGTTAAAATAAAT+TGG | - | chr7_1:60844581-60844600 | None:intergenic | 25.0% |
| !!! | CTCTTTGATCACATTTTTTA+AGG | - | chr7_1:60844622-60844641 | None:intergenic | 25.0% |
| ! | AAGACCAATAATACAGAAAA+CGG | - | chr7_1:60844733-60844752 | None:intergenic | 25.0% |
| ! | TTCAGCAAAAAGTTGAAATA+GGG | + | chr7_1:60844879-60844898 | Msa1028200:CDS | 25.0% |
| !! | TTTTTCAGCTTAACTGCAAA+TGG | - | chr7_1:60841453-60841472 | None:intergenic | 30.0% |
| TGCACATAGTAAATACTTTC+TGG | + | chr7_1:60841825-60841844 | Msa1028200:intron | 30.0% | |
| ! | TGTGCTATGTTTTGTGTTTT+TGG | + | chr7_1:60841891-60841910 | Msa1028200:intron | 30.0% |
| AGTTTATGTATCTTAAGACG+AGG | + | chr7_1:60841963-60841982 | Msa1028200:intron | 30.0% | |
| ! | AGGTATTCGATTTGAATTCT+GGG | + | chr7_1:60841983-60842002 | Msa1028200:intron | 30.0% |
| !!! | GTGTAAAAGTTTTTTACGCA+TGG | + | chr7_1:60842049-60842068 | Msa1028200:intron | 30.0% |
| TAGATACATAAAGAGTAGTC+TGG | + | chr7_1:60842542-60842561 | Msa1028200:intron | 30.0% | |
| ! | ATGAAAACCTTTTACTTGTG+AGG | + | chr7_1:60842856-60842875 | Msa1028200:CDS | 30.0% |
| CATAATAATAGGCTTCAACT+TGG | - | chr7_1:60843104-60843123 | None:intergenic | 30.0% | |
| ! | CAAGTTGAAGCCTATTATTA+TGG | + | chr7_1:60843102-60843121 | Msa1028200:CDS | 30.0% |
| AGCCTATTATTATGGAAGAA+TGG | + | chr7_1:60843110-60843129 | Msa1028200:CDS | 30.0% | |
| GCCTATTATTATGGAAGAAT+GGG | + | chr7_1:60843111-60843130 | Msa1028200:CDS | 30.0% | |
| CCTATTATTATGGAAGAATG+GGG | + | chr7_1:60843112-60843131 | Msa1028200:CDS | 30.0% | |
| !! | GTTGATAGATCTTTTTGGAA+AGG | + | chr7_1:60843150-60843169 | Msa1028200:CDS | 30.0% |
| !!! | CGGTTCAACTTTTAAAACAT+TGG | - | chr7_1:60843279-60843298 | None:intergenic | 30.0% |
| TTATTTGAACGGTTCAATCA+TGG | - | chr7_1:60843369-60843388 | None:intergenic | 30.0% | |
| CTAAAGTTCGGTTATTTGAA+CGG | - | chr7_1:60843380-60843399 | None:intergenic | 30.0% | |
| TCTCATAAACTGAATGTTCA+TGG | - | chr7_1:60843530-60843549 | None:intergenic | 30.0% | |
| AGTTTATGAGAATTTCCAGT+GGG | + | chr7_1:60843539-60843558 | Msa1028200:intron | 30.0% | |
| TTATATCCGTCTTTGTATTC+TGG | + | chr7_1:60843683-60843702 | Msa1028200:intron | 30.0% | |
| CATTAAAATTTGCAAGCTCA+AGG | + | chr7_1:60844073-60844092 | Msa1028200:intron | 30.0% | |
| ATATATCCTTTCAGATGGTA+TGG | - | chr7_1:60844278-60844297 | None:intergenic | 30.0% | |
| ATACCATCTGAAAGGATATA+TGG | + | chr7_1:60844277-60844296 | Msa1028200:CDS | 30.0% | |
| !! | TGCTTTAGAATTTCTACCTT+GGG | - | chr7_1:60844423-60844442 | None:intergenic | 30.0% |
| TTATGTGAATTTGCCAAAGA+TGG | + | chr7_1:60844534-60844553 | Msa1028200:intron | 30.0% | |
| !!! | TATTTTAACCAGCTTTGTTG+AGG | + | chr7_1:60844584-60844603 | Msa1028200:intron | 30.0% |
| AAATTCCATTTGTCTAACTC+AGG | - | chr7_1:60844645-60844664 | None:intergenic | 30.0% | |
| GACAAATGGAATTTGTATCT+AGG | + | chr7_1:60844651-60844670 | Msa1028200:CDS | 30.0% | |
| AGACCAATAATACAGAAAAC+GGG | - | chr7_1:60844732-60844751 | None:intergenic | 30.0% | |
| !! | ACTTGATAATGATGACTGTT+TGG | + | chr7_1:60844771-60844790 | Msa1028200:intron | 30.0% |
| CTTCAGCAAAAAGTTGAAAT+AGG | + | chr7_1:60844878-60844897 | Msa1028200:CDS | 30.0% | |
| TCAGCAAAAAGTTGAAATAG+GGG | + | chr7_1:60844880-60844899 | Msa1028200:CDS | 30.0% | |
| ! | GAGGTATTCGATTTGAATTC+TGG | + | chr7_1:60841982-60842001 | Msa1028200:intron | 35.0% |
| CATACATAGTGATGTGTGAT+TGG | - | chr7_1:60842077-60842096 | None:intergenic | 35.0% | |
| GCACAGAATAAGCTTGAATT+TGG | + | chr7_1:60842291-60842310 | Msa1028200:intron | 35.0% | |
| !!! | CAATTTGGATTTTGGAACGA+TGG | + | chr7_1:60842485-60842504 | Msa1028200:intron | 35.0% |
| !!! | ATTTTGGAACGATGGAGAAT+TGG | + | chr7_1:60842493-60842512 | Msa1028200:intron | 35.0% |
| TACTATGATGCGTGAATTTG+AGG | + | chr7_1:60842588-60842607 | Msa1028200:intron | 35.0% | |
| ! | TATTTCTATTGCCAAATGGC+TGG | + | chr7_1:60842759-60842778 | Msa1028200:intron | 35.0% |
| CCCCATTCTTCCATAATAAT+AGG | - | chr7_1:60843115-60843134 | None:intergenic | 35.0% | |
| !!! | GAAGCGTTGATAGATCTTTT+TGG | + | chr7_1:60843145-60843164 | Msa1028200:CDS | 35.0% |
| !! | TAGATCTTTTTGGAAAGGTC+AGG | + | chr7_1:60843155-60843174 | Msa1028200:CDS | 35.0% |
| !! | AGATCTTTTTGGAAAGGTCA+GGG | + | chr7_1:60843156-60843175 | Msa1028200:CDS | 35.0% |
| ! | TTTGAATGGTTTAGAGCAGT+TGG | - | chr7_1:60843335-60843354 | None:intergenic | 35.0% |
| ! | TGCTCTAAACCATTCAAACT+GGG | + | chr7_1:60843337-60843356 | Msa1028200:intron | 35.0% |
| ATATCTCCACAGAATGCTTT+AGG | - | chr7_1:60843493-60843512 | None:intergenic | 35.0% | |
| CAGTTTATGAGAATTTCCAG+TGG | + | chr7_1:60843538-60843557 | Msa1028200:intron | 35.0% | |
| ! | AGGACATGTTGTGATTCTTT+TGG | + | chr7_1:60843589-60843608 | Msa1028200:intron | 35.0% |
| TCCTAGAATATCATCTCCAA+CGG | - | chr7_1:60843657-60843676 | None:intergenic | 35.0% | |
| GCATAACCAGAATACAAAGA+CGG | - | chr7_1:60843692-60843711 | None:intergenic | 35.0% | |
| !! | ATCCTGCTGTATTGCTATTT+AGG | + | chr7_1:60843758-60843777 | Msa1028200:intron | 35.0% |
| !! | TCCTGCTGTATTGCTATTTA+GGG | + | chr7_1:60843759-60843778 | Msa1028200:intron | 35.0% |
| CAAAAACTTGGTTTCGGATA+TGG | + | chr7_1:60843870-60843889 | Msa1028200:intron | 35.0% | |
| ATATTCAGCAAACAGGAGTA+GGG | - | chr7_1:60843933-60843952 | None:intergenic | 35.0% | |
| AATATTCAGCAAACAGGAGT+AGG | - | chr7_1:60843934-60843953 | None:intergenic | 35.0% | |
| GATGTCAATATTCAGCAAAC+AGG | - | chr7_1:60843940-60843959 | None:intergenic | 35.0% | |
| TTTAATGCATCAGAAACACC+AGG | - | chr7_1:60844060-60844079 | None:intergenic | 35.0% | |
| TTTCATTGTCACCACAAAAC+AGG | + | chr7_1:60844098-60844117 | Msa1028200:intron | 35.0% | |
| ! | AGCAAAGTTTACCTGTTTTG+TGG | - | chr7_1:60844112-60844131 | None:intergenic | 35.0% |
| TTTGCTCTTTACCCTAGTAA+GGG | + | chr7_1:60844126-60844145 | Msa1028200:intron | 35.0% | |
| ATAAGAGGGGATGAAGTAAT+TGG | + | chr7_1:60844196-60844215 | Msa1028200:intron | 35.0% | |
| ! | GAAGTAAAGCATCAGCAAAT+CGG | - | chr7_1:60844237-60844256 | None:intergenic | 35.0% |
| AGACCATATATCCTTTCAGA+TGG | - | chr7_1:60844283-60844302 | None:intergenic | 35.0% | |
| ATCTGAAAGGATATATGGTC+TGG | + | chr7_1:60844282-60844301 | Msa1028200:CDS | 35.0% | |
| TCTGAAAGGATATATGGTCT+GGG | + | chr7_1:60844283-60844302 | Msa1028200:CDS | 35.0% | |
| !! | CTGCTTTAGAATTTCTACCT+TGG | - | chr7_1:60844424-60844443 | None:intergenic | 35.0% |
| AATATCTCGAAGACCATCTT+TGG | - | chr7_1:60844550-60844569 | None:intergenic | 35.0% | |
| ! | GTTCCCGTTTTCTGTATTAT+TGG | + | chr7_1:60844726-60844745 | Msa1028200:intron | 35.0% |
| TAATGATGACTGTTTGGATC+AGG | + | chr7_1:60844777-60844796 | Msa1028200:intron | 35.0% | |
| AATGATGACTGTTTGGATCA+GGG | + | chr7_1:60844778-60844797 | Msa1028200:intron | 35.0% | |
| AGCTGAAGAACTTGAATTCT+GGG | - | chr7_1:60844852-60844871 | None:intergenic | 35.0% | |
| TGCAGTTAAGCTGAAAAAGC+AGG | + | chr7_1:60841455-60841474 | Msa1028200:five_prime_UTR | 40.0% | |
| AGTTAAGCTGAAAAAGCAGG+AGG | + | chr7_1:60841458-60841477 | Msa1028200:five_prime_UTR | 40.0% | |
| AAAGCAGGAGGAAAGTGAAA+TGG | + | chr7_1:60841470-60841489 | Msa1028200:exon | 40.0% | |
| AAGCAGGAGGAAAGTGAAAT+GGG | + | chr7_1:60841471-60841490 | Msa1028200:exon | 40.0% | |
| TGGATTCAGCTACAGAAGAT+TGG | + | chr7_1:60841789-60841808 | Msa1028200:CDS | 40.0% | |
| TGTCTTAGTCTCAGCTGTTA+TGG | + | chr7_1:60842154-60842173 | Msa1028200:intron | 40.0% | |
| TGTACTACTGTGCTATGCTT+TGG | + | chr7_1:60842181-60842200 | Msa1028200:intron | 40.0% | |
| AGTGAGTTAAGGCACATTAG+AGG | - | chr7_1:60842417-60842436 | None:intergenic | 40.0% | |
| !! | AGAGTGGATTAGTAGCATCT+TGG | - | chr7_1:60842569-60842588 | None:intergenic | 40.0% |
| ATTCACGCATCATAGTAGAG+TGG | - | chr7_1:60842585-60842604 | None:intergenic | 40.0% | |
| TGAAATCAAGTCCAGCCATT+TGG | - | chr7_1:60842773-60842792 | None:intergenic | 40.0% | |
| TCATATCCAGTTTCCACTAC+CGG | - | chr7_1:60842840-60842859 | None:intergenic | 40.0% | |
| GCAACAACCTCACAAGTAAA+AGG | - | chr7_1:60842866-60842885 | None:intergenic | 40.0% | |
| !! | TAAACCTAGCTTTAGCTACG+TGG | - | chr7_1:60842964-60842983 | None:intergenic | 40.0% |
| GATGTCATTGTTCTTGTGCA+AGG | + | chr7_1:60843036-60843055 | Msa1028200:intron | 40.0% | |
| ACTCTCCAATATACCCTCAA+CGG | - | chr7_1:60843077-60843096 | None:intergenic | 40.0% | |
| ! | TTGAGGGTATATTGGAGAGT+TGG | + | chr7_1:60843077-60843096 | Msa1028200:CDS | 40.0% |
| ! | CTGCTCTAAACCATTCAAAC+TGG | + | chr7_1:60843336-60843355 | Msa1028200:intron | 40.0% |
| !!! | TGGTTTTGTCCCAGTTTGAA+TGG | - | chr7_1:60843349-60843368 | None:intergenic | 40.0% |
| ! | AACGGACACTGTCTAAAGTT+CGG | - | chr7_1:60843392-60843411 | None:intergenic | 40.0% |
| TCAACTGGTTGAACCATGAA+CGG | - | chr7_1:60843410-60843429 | None:intergenic | 40.0% | |
| GTTCAACCAGTTGAAATGTC+TGG | + | chr7_1:60843416-60843435 | Msa1028200:intron | 40.0% | |
| ACCAGTTGAAATGTCTGGTT+TGG | + | chr7_1:60843421-60843440 | Msa1028200:intron | 40.0% | |
| ACCAAACCAGACATTTCAAC+TGG | - | chr7_1:60843425-60843444 | None:intergenic | 40.0% | |
| TAGGTTTCTCATCATGCATC+TGG | - | chr7_1:60843474-60843493 | None:intergenic | 40.0% | |
| ! | GAGAAACCTAAAGCATTCTG+TGG | + | chr7_1:60843484-60843503 | Msa1028200:intron | 40.0% |
| ! | GTTGTGATTCTTTTGGACTG+TGG | + | chr7_1:60843596-60843615 | Msa1028200:intron | 40.0% |
| TCCGTTGGAGATGATATTCT+AGG | + | chr7_1:60843653-60843672 | Msa1028200:intron | 40.0% | |
| !! | CCTGCTGTATTGCTATTTAG+GGG | + | chr7_1:60843760-60843779 | Msa1028200:intron | 40.0% |
| TCGGATATGGTTGTAGTTTG+TGG | + | chr7_1:60843883-60843902 | Msa1028200:intron | 40.0% | |
| TATTCAGCAAACAGGAGTAG+GGG | - | chr7_1:60843932-60843951 | None:intergenic | 40.0% | |
| CTTTGCTCTTTACCCTAGTA+AGG | + | chr7_1:60844125-60844144 | Msa1028200:intron | 40.0% | |
| ACTCTCTATTGTTGCGATCA+TGG | - | chr7_1:60844154-60844173 | None:intergenic | 40.0% | |
| GAGTAACCATACCATCTGAA+AGG | + | chr7_1:60844269-60844288 | Msa1028200:CDS | 40.0% | |
| !! | TTATTTTACCCACAGTCCCA+AGG | + | chr7_1:60844404-60844423 | Msa1028200:intron | 40.0% |
| AATTTCTACCTTGGGACTGT+GGG | - | chr7_1:60844415-60844434 | None:intergenic | 40.0% | |
| ! | TAGCAGCACTCAATGTCTTT+TGG | + | chr7_1:60844501-60844520 | Msa1028200:intron | 40.0% |
| !! | TAACCAGCTTTGTTGAGGAT+CGG | + | chr7_1:60844589-60844608 | Msa1028200:intron | 40.0% |
| AAGAGCCTGAGTTAGACAAA+TGG | + | chr7_1:60844637-60844656 | Msa1028200:CDS | 40.0% | |
| ACTGAGACAAAAATGAGGGA+GGG | - | chr7_1:60844708-60844727 | None:intergenic | 40.0% | |
| AACTGAGACAAAAATGAGGG+AGG | - | chr7_1:60844709-60844728 | None:intergenic | 40.0% | |
| GGGAACTGAGACAAAAATGA+GGG | - | chr7_1:60844712-60844731 | None:intergenic | 40.0% | |
| ACTGTTTGGATCAGGGAATT+GGG | + | chr7_1:60844785-60844804 | Msa1028200:intron | 40.0% | |
| GCTGAAGAACTTGAATTCTG+GGG | - | chr7_1:60844851-60844870 | None:intergenic | 40.0% | |
| GAGCTGAAGAACTTGAATTC+TGG | - | chr7_1:60844853-60844872 | None:intergenic | 40.0% | |
| AATGGGAGAGCTTTACGCTT+TGG | + | chr7_1:60841488-60841507 | Msa1028200:exon | 45.0% | |
| ! | CTTTACGCTTTGGACTTCGA+TGG | + | chr7_1:60841498-60841517 | Msa1028200:CDS | 45.0% |
| !! | AGATGGCCTGGTTTGTTTGA+TGG | + | chr7_1:60841764-60841783 | Msa1028200:CDS | 45.0% |
| !! | GATGGCCTGGTTTGTTTGAT+GGG | + | chr7_1:60841765-60841784 | Msa1028200:CDS | 45.0% |
| !! | ATGGCCTGGTTTGTTTGATG+GGG | + | chr7_1:60841766-60841785 | Msa1028200:CDS | 45.0% |
| AGATATCAGGGTTTAGACCC+TGG | + | chr7_1:60842390-60842409 | Msa1028200:intron | 45.0% | |
| TAAGGCACATTAGAGGTCCA+GGG | - | chr7_1:60842410-60842429 | None:intergenic | 45.0% | |
| TTAAGGCACATTAGAGGTCC+AGG | - | chr7_1:60842411-60842430 | None:intergenic | 45.0% | |
| ACTACCACGTAGCTAAAGCT+AGG | + | chr7_1:60842957-60842976 | Msa1028200:intron | 45.0% | |
| TTCTTGTGCAAGGTTGCAGA+GGG | + | chr7_1:60843046-60843065 | Msa1028200:intron | 45.0% | |
| TGGAAGAATGGGGTGAGAAT+AGG | + | chr7_1:60843122-60843141 | Msa1028200:CDS | 45.0% | |
| GGAAGAATGGGGTGAGAATA+GGG | + | chr7_1:60843123-60843142 | Msa1028200:CDS | 45.0% | |
| TTGGAAAGGTCAGGGATGAA+TGG | + | chr7_1:60843164-60843183 | Msa1028200:CDS | 45.0% | |
| AAAGGTCAGGGATGAATGGT+TGG | + | chr7_1:60843168-60843187 | Msa1028200:CDS | 45.0% | |
| !! | CAGGATTTTGCTGCTTGGAT+TGG | + | chr7_1:60843193-60843212 | Msa1028200:CDS | 45.0% |
| AGTTGAACCGTACATCGAAC+TGG | + | chr7_1:60843289-60843308 | Msa1028200:intron | 45.0% | |
| CTTTAGACAGTGTCCGTTCA+TGG | + | chr7_1:60843394-60843413 | Msa1028200:intron | 45.0% | |
| AGTGGGAGATCCGTTAGATT+GGG | + | chr7_1:60843556-60843575 | Msa1028200:intron | 45.0% | |
| ACTCTACTCCCCCAATCTAA+CGG | - | chr7_1:60843569-60843588 | None:intergenic | 45.0% | |
| TTAGATTGGGGGAGTAGAGT+AGG | + | chr7_1:60843569-60843588 | Msa1028200:intron | 45.0% | |
| CGGAACTTCCTTGAACAGAA+AGG | - | chr7_1:60843637-60843656 | None:intergenic | 45.0% | |
| TCTGTTCAAGGAAGTTCCGT+TGG | + | chr7_1:60843638-60843657 | Msa1028200:intron | 45.0% | |
| CCCCTAAATAGCAATACAGC+AGG | - | chr7_1:60843763-60843782 | None:intergenic | 45.0% | |
| ! | TGTAGTTTGTGGCTTCCAAC+CGG | + | chr7_1:60843894-60843913 | Msa1028200:intron | 45.0% |
| GTAGGGGTGAGCAAAATATC+CGG | - | chr7_1:60843916-60843935 | None:intergenic | 45.0% | |
| CGATCATGGTTCCCTTACTA+GGG | - | chr7_1:60844140-60844159 | None:intergenic | 45.0% | |
| GAATTTCTACCTTGGGACTG+TGG | - | chr7_1:60844416-60844435 | None:intergenic | 45.0% | |
| ! | AAAAGAGACCAGAGCACCAA+GGG | + | chr7_1:60844448-60844467 | Msa1028200:CDS | 45.0% |
| CGGGAACTGAGACAAAAATG+AGG | - | chr7_1:60844713-60844732 | None:intergenic | 45.0% | |
| GACTGTTTGGATCAGGGAAT+TGG | + | chr7_1:60844784-60844803 | Msa1028200:intron | 45.0% | |
| CTGTTTGGATCAGGGAATTG+GGG | + | chr7_1:60844786-60844805 | Msa1028200:intron | 45.0% | |
| !! | ATTTGATTATTATAATAATA+AGG | + | chr7_1:60842220-60842239 | Msa1028200:intron | 5.0% |
| !! | TTTGATTATTATAATAATAA+GGG | + | chr7_1:60842221-60842240 | Msa1028200:intron | 5.0% |
| GGAGTCATCTGTGATAGCTG+CGG | + | chr7_1:60841519-60841538 | Msa1028200:CDS | 50.0% | |
| AAGCTCTCTCTCTGCTCTCA+AGG | + | chr7_1:60841545-60841564 | Msa1028200:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGATGG+AGG | - | chr7_1:60841573-60841592 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | - | chr7_1:60841576-60841595 | None:intergenic | 50.0% | |
| TGCAGGCTGCTAAAGTGAGA+TGG | + | chr7_1:60841747-60841766 | Msa1028200:intron | 50.0% | |
| TCCACCCCATCAAACAAACC+AGG | - | chr7_1:60841773-60841792 | None:intergenic | 50.0% | |
| TTGTTCATGTCAGGTGCGAC+CGG | + | chr7_1:60842818-60842837 | Msa1028200:intron | 50.0% | |
| ACCGAAGACTTCCTGATGGA+CGG | - | chr7_1:60842903-60842922 | None:intergenic | 50.0% | |
| TCCATCAGGAAGTCTTCGGT+GGG | + | chr7_1:60842903-60842922 | Msa1028200:intron | 50.0% | |
| GTTCTTGTGCAAGGTTGCAG+AGG | + | chr7_1:60843045-60843064 | Msa1028200:intron | 50.0% | |
| TCTTGTGCAAGGTTGCAGAG+GGG | + | chr7_1:60843047-60843066 | Msa1028200:intron | 50.0% | |
| ! | GCTTGCCGTTGAGGGTATAT+TGG | + | chr7_1:60843069-60843088 | Msa1028200:CDS | 50.0% |
| ! | TGGAGCAGGATTTTGCTGCT+TGG | + | chr7_1:60843188-60843207 | Msa1028200:CDS | 50.0% |
| !! | CTGCTTGGATTGGTGCAAAC+AGG | + | chr7_1:60843203-60843222 | Msa1028200:intron | 50.0% |
| TTCCTCTGTCAAGGGACGAT+TGG | - | chr7_1:60843233-60843252 | None:intergenic | 50.0% | |
| ! | CAATCTAACGGATCTCCCAC+TGG | - | chr7_1:60843557-60843576 | None:intergenic | 50.0% |
| CAGTGGGAGATCCGTTAGAT+TGG | + | chr7_1:60843555-60843574 | Msa1028200:intron | 50.0% | |
| GTGGGAGATCCGTTAGATTG+GGG | + | chr7_1:60843557-60843576 | Msa1028200:intron | 50.0% | |
| TGGGAGATCCGTTAGATTGG+GGG | + | chr7_1:60843558-60843577 | Msa1028200:intron | 50.0% | |
| GGGTGAGCAAAATATCCGGT+TGG | - | chr7_1:60843912-60843931 | None:intergenic | 50.0% | |
| GCGATCATGGTTCCCTTACT+AGG | - | chr7_1:60844141-60844160 | None:intergenic | 50.0% | |
| GCTTTACTTCGAGAGCTTGC+TGG | + | chr7_1:60844247-60844266 | Msa1028200:CDS | 50.0% | |
| AGGATATATGGTCTGGGCAC+TGG | + | chr7_1:60844289-60844308 | Msa1028200:CDS | 50.0% | |
| GGATATATGGTCTGGGCACT+GGG | + | chr7_1:60844290-60844309 | Msa1028200:CDS | 50.0% | |
| ! | CAAAAGAGACCAGAGCACCA+AGG | + | chr7_1:60844447-60844466 | Msa1028200:CDS | 50.0% |
| TAGCCGATCCTCAACAAAGC+TGG | - | chr7_1:60844595-60844614 | None:intergenic | 50.0% | |
| TTGGGGTTACAACACTGCAC+AGG | + | chr7_1:60844803-60844822 | Msa1028200:CDS | 50.0% | |
| CAACACTGCACAGGAGAAAG+AGG | + | chr7_1:60844812-60844831 | Msa1028200:CDS | 50.0% | |
| GCTGCTAAAGTGAGATGGCC+TGG | + | chr7_1:60841752-60841771 | Msa1028200:CDS | 55.0% | |
| !! | GCCTGGTTTGTTTGATGGGG+TGG | + | chr7_1:60841769-60841788 | Msa1028200:CDS | 55.0% |
| AGACCAGAATCCCGTCCATC+AGG | + | chr7_1:60842889-60842908 | Msa1028200:CDS | 55.0% | |
| ! | CTTCCTGATGGACGGGATTC+TGG | - | chr7_1:60842895-60842914 | None:intergenic | 55.0% |
| ! | CCGAAGACTTCCTGATGGAC+GGG | - | chr7_1:60842902-60842921 | None:intergenic | 55.0% |
| CCCGTCCATCAGGAAGTCTT+CGG | + | chr7_1:60842899-60842918 | Msa1028200:CDS | 55.0% | |
| GTCCATCAGGAAGTCTTCGG+TGG | + | chr7_1:60842902-60842921 | Msa1028200:intron | 55.0% | |
| ACCCACCGAAGACTTCCTGA+TGG | - | chr7_1:60842907-60842926 | None:intergenic | 55.0% | |
| CAGGGATGAATGGTTGGAGC+AGG | + | chr7_1:60843174-60843193 | Msa1028200:CDS | 55.0% | |
| GTCCAATCGTCCCTTGACAG+AGG | + | chr7_1:60843228-60843247 | Msa1028200:intron | 55.0% | |
| GGTCTCGCCAGTTCGATGTA+CGG | - | chr7_1:60843299-60843318 | None:intergenic | 55.0% | |
| ATCGAACTGGCGAGACCTCT+GGG | + | chr7_1:60843302-60843321 | Msa1028200:intron | 55.0% | |
| GCAGTTGGATCATGACCCAG+AGG | - | chr7_1:60843320-60843339 | None:intergenic | 55.0% | |
| CTTACTGCAGTGTCAGCCCT+TGG | - | chr7_1:60844467-60844486 | None:intergenic | 55.0% | |
| ATGTCAGGTGCGACCGGTAG+TGG | + | chr7_1:60842824-60842843 | Msa1028200:intron | 60.0% | |
| !! | GTGCGACCGGTAGTGGAAAC+TGG | + | chr7_1:60842831-60842850 | Msa1028200:CDS | 60.0% |
| CATCGAACTGGCGAGACCTC+TGG | + | chr7_1:60843301-60843320 | Msa1028200:intron | 60.0% | |
| !! | AGTGTCAGCCCTTGGTGCTC+TGG | - | chr7_1:60844459-60844478 | None:intergenic | 60.0% |
| TGCAGAGGGGCTTGCCGTTG+AGG | + | chr7_1:60843060-60843079 | Msa1028200:CDS | 65.0% | |
| GCAGAGGGGCTTGCCGTTGA+GGG | + | chr7_1:60843061-60843080 | Msa1028200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 60841421 | 60845126 | 60841421 | ID=Msa1028200;Name=Msa1028200 |
| chr7_1 | mRNA | 60841421 | 60845126 | 60841421 | ID=Msa1028200-mRNA-1;Parent=Msa1028200;Name=Msa1028200-mRNA-1;_AED=0.33;_eAED=0.33;_QI=68|0.75|0.77|1|0.75|0.88|9|227|245 |
| chr7_1 | exon | 60841421 | 60841566 | 60841421 | ID=Msa1028200-mRNA-1:exon:12716;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60841752 | 60841832 | 60841752 | ID=Msa1028200-mRNA-1:exon:12717;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60842831 | 60842920 | 60842831 | ID=Msa1028200-mRNA-1:exon:12718;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60843058 | 60843214 | 60843058 | ID=Msa1028200-mRNA-1:exon:12719;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60844050 | 60844060 | 60844050 | ID=Msa1028200-mRNA-1:exon:12720;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60844232 | 60844311 | 60844232 | ID=Msa1028200-mRNA-1:exon:12721;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60844419 | 60844481 | 60844419 | ID=Msa1028200-mRNA-1:exon:12722;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60844596 | 60844672 | 60844596 | ID=Msa1028200-mRNA-1:exon:12723;Parent=Msa1028200-mRNA-1 |
| chr7_1 | exon | 60844799 | 60845126 | 60844799 | ID=Msa1028200-mRNA-1:exon:12724;Parent=Msa1028200-mRNA-1 |
| chr7_1 | five_prime_UTR | 60841421 | 60841488 | 60841421 | ID=Msa1028200-mRNA-1:five_prime_utr;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60841489 | 60841566 | 60841489 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60841752 | 60841832 | 60841752 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60842831 | 60842920 | 60842831 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60843058 | 60843214 | 60843058 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60844050 | 60844060 | 60844050 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60844232 | 60844311 | 60844232 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60844419 | 60844481 | 60844419 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60844596 | 60844672 | 60844596 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | CDS | 60844799 | 60844899 | 60844799 | ID=Msa1028200-mRNA-1:cds;Parent=Msa1028200-mRNA-1 |
| chr7_1 | three_prime_UTR | 60844900 | 60845126 | 60844900 | ID=Msa1028200-mRNA-1:three_prime_utr;Parent=Msa1028200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
