Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066950 | XP_003623980.1 | 97.015 | 268 | 8 | 0 | 1 | 268 | 1 | 268 | 0.0 | 529 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066950 | B7FKG7 | 97.015 | 268 | 8 | 0 | 1 | 268 | 1 | 268 | 0.0 | 529 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030960 | Msa1066950 | 0.808198 | 3.485109e-50 | -8.615850e-47 |
| Msa1028200 | Msa1066950 | 0.825828 | 3.787744e-54 | -8.615850e-47 |
| Msa1066820 | Msa1066950 | 0.873168 | 1.812520e-67 | -8.615850e-47 |
| Msa1066950 | Msa1082640 | 0.823973 | 1.037848e-53 | -8.615850e-47 |
| Msa1066950 | Msa1355490 | 0.858276 | 9.207423e-63 | -8.615850e-47 |
| Msa0331060 | Msa1066950 | 0.824203 | 9.164621e-54 | -8.615850e-47 |
| Msa0490200 | Msa1066950 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066950 | MtrunA17_Chr7g0247901 | 97.015 | 268 | 8 | 0 | 1 | 268 | 1 | 268 | 0.0 | 529 |
| Msa1066950 | MtrunA17_Chr7g0247911 | 79.851 | 268 | 54 | 0 | 1 | 268 | 1 | 268 | 4.74e-152 | 425 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066950 | AT2G45990.2 | 80.970 | 268 | 51 | 0 | 1 | 268 | 1 | 268 | 8.04e-161 | 447 |
| Msa1066950 | AT2G45990.1 | 80.970 | 268 | 51 | 0 | 1 | 268 | 1 | 268 | 8.04e-161 | 447 |
| Msa1066950 | AT2G45990.3 | 78.731 | 268 | 52 | 1 | 1 | 268 | 1 | 263 | 3.00e-153 | 428 |
| Msa1066950 | AT2G45990.4 | 80.476 | 210 | 41 | 0 | 1 | 210 | 1 | 210 | 3.30e-122 | 347 |
Find 82 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTATTGTTTCTATTATT+TGG | -0.002985 | 7_2:-61111109 | Msa1066950:three_prime_UTR |
| CCCCATTCTTCCATAATAAT+AGG | 0.262053 | 7_2:+61113095 | None:intergenic |
| CTTCCTGATGGACGGGGTTC+TGG | 0.269485 | 7_2:+61113315 | None:intergenic |
| GAGCTGAAGAACTTGAATTC+TGG | 0.278098 | 7_2:+61111298 | None:intergenic |
| TCTTATTGTTTCTATTATTT+GGG | 0.282656 | 7_2:-61111108 | Msa1066950:three_prime_UTR |
| GACTGTTTGGATCAGGGAAT+TGG | 0.297891 | 7_2:-61111364 | Msa1066950:intron |
| CAAGTTGAAGCCTATTATTA+TGG | 0.320716 | 7_2:-61113105 | Msa1066950:CDS |
| GCAACAACCTCGCAAGTAAA+AGG | 0.326462 | 7_2:+61113344 | None:intergenic |
| GCTTGCCGTTGAGGGTATAT+TGG | 0.326642 | 7_2:-61113138 | Msa1066950:CDS |
| AAGAGAAATAAGGGAATGTT+TGG | 0.332914 | 7_2:-61114781 | None:intergenic |
| ACTGTTTGGATCAGGGAATT+GGG | 0.342469 | 7_2:-61111363 | Msa1066950:intron |
| AGCTGAAGAACTTGAATTCT+GGG | 0.349248 | 7_2:+61111299 | None:intergenic |
| GGAAGAATGGGGTGAGAATA+GGG | 0.356927 | 7_2:-61113084 | Msa1066950:CDS |
| AGATGGCCTGGTTTGTTTGA+TGG | 0.357614 | 7_2:-61114446 | Msa1066950:CDS |
| GCCTATTATTATGGAAGAAT+GGG | 0.363331 | 7_2:-61113096 | Msa1066950:CDS |
| GATGGCCTGGTTTGTTTGAT+GGG | 0.365167 | 7_2:-61114445 | Msa1066950:CDS |
| TGCTTTAGAATTTCTACCTT+GGG | 0.372680 | 7_2:+61111727 | None:intergenic |
| GCCTGGTTTGTTTGATGGGG+TGG | 0.377494 | 7_2:-61114441 | Msa1066950:CDS |
| TGGAAGAATGGGGTGAGAAT+AGG | 0.377537 | 7_2:-61113085 | Msa1066950:CDS |
| GTGCGACCGGTAGTGGAAAC+TGG | 0.384499 | 7_2:-61113376 | Msa1066950:CDS |
| AGGATATATGGTCTGGGCAC+TGG | 0.391773 | 7_2:-61111858 | Msa1066950:CDS |
| GCTTTACTTCGAGAGCTTGC+TGG | 0.393073 | 7_2:-61111900 | Msa1066950:CDS |
| AGTGTCAGCCCTTGGTGCTC+TGG | 0.397313 | 7_2:+61111691 | None:intergenic |
| AAGCAGGAGGAAAGTGAAAT+GGG | 0.399654 | 7_2:-61114721 | Msa1066950:exon |
| AAAGCAGGAGGAAAGTGAAA+TGG | 0.400941 | 7_2:-61114722 | Msa1066950:exon |
| ATACCATCTGAAAGGATATA+TGG | 0.402764 | 7_2:-61111870 | Msa1066950:CDS |
| ATCTGAAAGGATATATGGTC+TGG | 0.415001 | 7_2:-61111865 | Msa1066950:CDS |
| AGCCTATTATTATGGAAGAA+TGG | 0.416134 | 7_2:-61113097 | Msa1066950:CDS |
| TTTCATTGTCACCACAAAAC+AGG | 0.416219 | 7_2:-61112049 | Msa1066950:intron |
| AATGGGAGAGCTTTACGCTT+TGG | 0.417877 | 7_2:-61114704 | Msa1066950:CDS |
| AGACCAGAACCCCGTCCATC+AGG | 0.441329 | 7_2:-61113318 | Msa1066950:CDS |
| GCAGAGGGGCTTGCCGTTGA+GGG | 0.442318 | 7_2:-61113146 | Msa1066950:CDS |
| TGCAGAGGGGCTTGCCGTTG+AGG | 0.456207 | 7_2:-61113147 | Msa1066950:CDS |
| CTGCTTGGATTGGTGCAAAC+AGG | 0.457377 | 7_2:-61113004 | Msa1066950:intron |
| TTCTTGTGCAAGGTTGCAGA+GGG | 0.462379 | 7_2:-61113161 | Msa1066950:intron |
| TTGGAAAGGTCAGGGATGAA+TGG | 0.464231 | 7_2:-61113043 | Msa1066950:CDS |
| CATTAAAATTTGCAAGCTCA+AGG | 0.470306 | 7_2:-61112074 | Msa1066950:CDS |
| CCGAAGACTTCCTGATGGAC+GGG | 0.474908 | 7_2:+61113308 | None:intergenic |
| CATAATAATAGGCTTCAACT+TGG | 0.480574 | 7_2:+61113106 | None:intergenic |
| ATATATCCTTTCAGATGGTA+TGG | 0.488726 | 7_2:+61111872 | None:intergenic |
| GAAGTAAAGCATCAGCAAAT+CGG | 0.489034 | 7_2:+61111913 | None:intergenic |
| GACAAATGGAATTTGTATCT+AGG | 0.490531 | 7_2:-61111496 | Msa1066950:intron |
| CTGCTTTAGAATTTCTACCT+TGG | 0.490956 | 7_2:+61111726 | None:intergenic |
| TGGATTCAGCTACAGAGGAT+TGG | 0.493540 | 7_2:-61114421 | Msa1066950:CDS |
| TCATATCCAGTTTCCACTAC+CGG | 0.499546 | 7_2:+61113370 | None:intergenic |
| AAGCTCTCTCTCTGCTCTCA+AGG | 0.502315 | 7_2:-61114647 | Msa1066950:intron |
| CTTACTGCAGTGTCAGCCCT+TGG | 0.503169 | 7_2:+61111683 | None:intergenic |
| CCCGTCCATCAGGAAGTCTT+CGG | 0.503977 | 7_2:-61113308 | Msa1066950:intron |
| GCTGCTAAAGTGAGATGGCC+TGG | 0.506629 | 7_2:-61114458 | Msa1066950:CDS |
| GGATATATGGTCTGGGCACT+GGG | 0.512731 | 7_2:-61111857 | Msa1066950:intron |
| AAGAGCCTGAGTTAGACAAA+TGG | 0.518838 | 7_2:-61111510 | Msa1066950:CDS |
| CAGGGATGAATGGTTGGAGC+AGG | 0.519721 | 7_2:-61113033 | Msa1066950:CDS |
| TGCAGGCTGCTAAAGTGAGA+TGG | 0.526179 | 7_2:-61114463 | Msa1066950:intron |
| ACCGAAGACTTCCTGATGGA+CGG | 0.526632 | 7_2:+61113307 | None:intergenic |
| TTGTTCATGTCAGGTGCGAC+CGG | 0.526998 | 7_2:-61113389 | Msa1066950:intron |
| AAATTCCATTTGTCTAACTC+AGG | 0.529607 | 7_2:+61111505 | None:intergenic |
| CAACACTGCACAGGAGAAAG+AGG | 0.532803 | 7_2:-61111336 | Msa1066950:CDS |
| TAACCAGCTTTGTTGAGGAT+CGG | 0.537039 | 7_2:-61111558 | Msa1066950:intron |
| TTGAGGGTATATTGGAGAGT+TGG | 0.538203 | 7_2:-61113130 | Msa1066950:CDS |
| CTGTTTGGATCAGGGAATTG+GGG | 0.541882 | 7_2:-61111362 | Msa1066950:intron |
| ATGGCCTGGTTTGTTTGATG+GGG | 0.541966 | 7_2:-61114444 | Msa1066950:CDS |
| GTTCTTGTGCAAGGTTGCAG+AGG | 0.550341 | 7_2:-61113162 | Msa1066950:intron |
| ATTAAAATTTGCAAGCTCAA+GGG | 0.550856 | 7_2:-61112073 | Msa1066950:CDS |
| AAAGGTCAGGGATGAATGGT+TGG | 0.557400 | 7_2:-61113039 | Msa1066950:CDS |
| CTTTACGCTTTGGACTTCGA+TGG | 0.561411 | 7_2:-61114694 | Msa1066950:CDS |
| TCTGAAAGGATATATGGTCT+GGG | 0.569992 | 7_2:-61111864 | Msa1066950:CDS |
| AAAAGAGACCAGAGCACCAA+GGG | 0.580694 | 7_2:-61111699 | Msa1066950:CDS |
| TTTGCATATAGAATATATCC+TGG | 0.584877 | 7_2:-61112108 | Msa1066950:intron |
| ACCCACCGAAGACTTCCTGA+TGG | 0.599827 | 7_2:+61113303 | None:intergenic |
| AGACCATATATCCTTTCAGA+TGG | 0.605552 | 7_2:+61111867 | None:intergenic |
| GAGTAACCATACCATCTGAA+AGG | 0.613779 | 7_2:-61111878 | Msa1066950:CDS |
| CGAAGACTTCCTGATGGACG+GGG | 0.624936 | 7_2:+61113309 | None:intergenic |
| TCCACCCCATCAAACAAACC+AGG | 0.626332 | 7_2:+61114440 | None:intergenic |
| ACTCTCCAATATACCCTCAA+CGG | 0.634212 | 7_2:+61113133 | None:intergenic |
| TTTAATGCATCAGAAACACC+AGG | 0.634288 | 7_2:+61112090 | None:intergenic |
| TTGGGGTTACAACACTGCAC+AGG | 0.634972 | 7_2:-61111345 | Msa1066950:CDS |
| GCTGAAGAACTTGAATTCTG+GGG | 0.646930 | 7_2:+61111300 | None:intergenic |
| CCTATTATTATGGAAGAATG+GGG | 0.658487 | 7_2:-61113095 | Msa1066950:CDS |
| TGGGGTGGATTCAGCTACAG+AGG | 0.663314 | 7_2:-61114426 | Msa1066950:CDS |
| CAAAAGAGACCAGAGCACCA+AGG | 0.667405 | 7_2:-61111700 | Msa1066950:CDS |
| GGAGTCATCTGTGATAGCTG+CGG | 0.668448 | 7_2:-61114673 | Msa1066950:CDS |
| TCTTGTGCAAGGTTGCAGAG+GGG | 0.704898 | 7_2:-61113160 | Msa1066950:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTATTATAATAATAAG+GGG | - | chr7_2:61111830-61111849 | Msa1066950:intron | 10.0% |
| !!! | AACTTTTATAATGTTTATAA+AGG | + | chr7_2:61114629-61114648 | None:intergenic | 10.0% |
| !!! | TTTTCAATCTTTTATTATGT+TGG | - | chr7_2:61111276-61111295 | Msa1066950:CDS | 15.0% |
| !! | TTGAATTGAATTTATTTACT+CGG | - | chr7_2:61111628-61111647 | Msa1066950:intron | 15.0% |
| !! | AGTGCAAAAAAATATTATAA+TGG | - | chr7_2:61111875-61111894 | Msa1066950:CDS | 15.0% |
| !!! | ATTTTAGGAGATATTTTTAT+AGG | - | chr7_2:61111947-61111966 | Msa1066950:intron | 15.0% |
| !!! | TTTTAGGAGATATTTTTATA+GGG | - | chr7_2:61111948-61111967 | Msa1066950:intron | 15.0% |
| !! | TGACTTCTAATTATAAAATA+AGG | - | chr7_2:61112070-61112089 | Msa1066950:CDS | 15.0% |
| !! | AATTATAAAATAAGGCAATT+TGG | - | chr7_2:61112078-61112097 | Msa1066950:CDS | 15.0% |
| !!! | AATTTCATGAAATATTTTAC+TGG | - | chr7_2:61112279-61112298 | Msa1066950:intron | 15.0% |
| !! | TTAGTATTAAGAAAAATAAG+AGG | - | chr7_2:61113849-61113868 | Msa1066950:intron | 15.0% |
| !! | TAGTATTAAGAAAAATAAGA+GGG | - | chr7_2:61113850-61113869 | Msa1066950:intron | 15.0% |
| !!! | ATCTTATTGTTTCTATTATT+TGG | - | chr7_2:61114706-61114725 | Msa1066950:CDS | 15.0% |
| !!! | TCTTATTGTTTCTATTATTT+GGG | - | chr7_2:61114707-61114726 | Msa1066950:exon | 15.0% |
| !!! | TTATGTATATTACTTTTGAT+AGG | - | chr7_2:61114761-61114780 | Msa1066950:five_prime_UTR | 15.0% |
| !!! | TTCAATGTCAAAACAATTTT+TGG | - | chr7_2:61111226-61111245 | Msa1066950:three_prime_UTR | 20.0% |
| !!! | TCAATGTCAAAACAATTTTT+GGG | - | chr7_2:61111227-61111246 | Msa1066950:three_prime_UTR | 20.0% |
| !!! | TTTTATTATGTTGGAATTCA+TGG | - | chr7_2:61111285-61111304 | Msa1066950:CDS | 20.0% |
| !!! | ATTTGTTTGAAATTTTTTGC+AGG | - | chr7_2:61111335-61111354 | Msa1066950:CDS | 20.0% |
| !! | TCCTAAAATACATAATCATA+GGG | + | chr7_2:61111936-61111955 | None:intergenic | 20.0% |
| !! | ATATGTTTGAAGATATTCAA+TGG | + | chr7_2:61112324-61112343 | None:intergenic | 20.0% |
| !!! | TTGTTTGGTTTTTAAAACAT+TGG | - | chr7_2:61113044-61113063 | Msa1066950:CDS | 20.0% |
| !!! | AATAGGTTTTTATTTGGATA+TGG | + | chr7_2:61113464-61113483 | None:intergenic | 20.0% |
| !!! | CCATTTAATAGGTTTTTATT+TGG | + | chr7_2:61113470-61113489 | None:intergenic | 20.0% |
| !! | CCAAATAAAAACCTATTAAA+TGG | - | chr7_2:61113467-61113486 | Msa1066950:intron | 20.0% |
| !! | TTTGGAAAAAAAATCTTGTT+TGG | + | chr7_2:61113503-61113522 | None:intergenic | 20.0% |
| !! | GATGATTTCCTATTATTAAT+TGG | - | chr7_2:61113678-61113697 | Msa1066950:intron | 20.0% |
| !! | AGTATTAAGAAAAATAAGAG+GGG | - | chr7_2:61113851-61113870 | Msa1066950:intron | 20.0% |
| !!! | TTACTTTTGATAGGATAAAT+TGG | - | chr7_2:61114770-61114789 | Msa1066950:five_prime_UTR | 20.0% |
| !! | TATTTAGTTTCAGCTGTTAT+TGG | - | chr7_2:61111460-61111479 | Msa1066950:intron | 25.0% |
| !! | ACTATGTATGTAGATACTTT+TGG | - | chr7_2:61111692-61111711 | Msa1066950:CDS | 25.0% |
| !! | GATACTTTTGGATGAATTTT+AGG | - | chr7_2:61111704-61111723 | Msa1066950:CDS | 25.0% |
| !! | ACCCTATGATTATGTATTTT+AGG | - | chr7_2:61111932-61111951 | Msa1066950:intron | 25.0% |
| ! | CTCCTAAAATACATAATCAT+AGG | + | chr7_2:61111937-61111956 | None:intergenic | 25.0% |
| !! | TTTTATAGGGAAATGTTAGT+AGG | - | chr7_2:61111961-61111980 | Msa1066950:intron | 25.0% |
| ! | TAGTGATTATGTTAGATATC+AGG | - | chr7_2:61111985-61112004 | Msa1066950:intron | 25.0% |
| ! | AGTGATTATGTTAGATATCA+GGG | - | chr7_2:61111986-61112005 | Msa1066950:intron | 25.0% |
| !!! | CTTTTTTCAATAGTGAGTTA+AGG | + | chr7_2:61112036-61112055 | None:intergenic | 25.0% |
| !! | AAATAAGGCAATTTGGATTT+TGG | - | chr7_2:61112085-61112104 | Msa1066950:CDS | 25.0% |
| ! | AAATTCAACAGTTTGAATGA+AGG | + | chr7_2:61112264-61112283 | None:intergenic | 25.0% |
| !! | CATATATTTCTATTGCCAAA+TGG | - | chr7_2:61112363-61112382 | Msa1066950:intron | 25.0% |
| ! | TTTATATAGTTGTTCATGTC+AGG | - | chr7_2:61112417-61112436 | Msa1066950:intron | 25.0% |
| ! | AATGAGAAAAAATGAGGTAT+AGG | + | chr7_2:61112544-61112563 | None:intergenic | 25.0% |
| ! | GTAGTTAATGAGAAAAAATG+AGG | + | chr7_2:61112550-61112569 | None:intergenic | 25.0% |
| ! | AAAAATTATTCCTCTGTCAA+GGG | + | chr7_2:61112849-61112868 | None:intergenic | 25.0% |
| ! | TAAAAATTATTCCTCTGTCA+AGG | + | chr7_2:61112850-61112869 | None:intergenic | 25.0% |
| !! | ATTATTTTCCTTTCTGTTCA+AGG | - | chr7_2:61113289-61113308 | Msa1066950:intron | 25.0% |
| ! | ACTAGATATTGTCATTAGTT+TGG | - | chr7_2:61113380-61113399 | Msa1066950:intron | 25.0% |
| !!! | GTTTTTATTTGGATATGGTT+AGG | + | chr7_2:61113459-61113478 | None:intergenic | 25.0% |
| ! | GCTAATCTAATCCATTTAAT+AGG | + | chr7_2:61113481-61113500 | None:intergenic | 25.0% |
| !! | AAACCAGGTTTTTGTTAATT+CGG | + | chr7_2:61113527-61113546 | None:intergenic | 25.0% |
| ! | AATTAACAAAAACCTGGTTT+CGG | - | chr7_2:61113527-61113546 | Msa1066950:intron | 25.0% |
| ! | AAGCATCACCAATTAATAAT+AGG | + | chr7_2:61113689-61113708 | None:intergenic | 25.0% |
| ! | TTTGCATATAGAATATATCC+TGG | - | chr7_2:61113707-61113726 | Msa1066950:intron | 25.0% |
| ! | ATTAAAATTTGCAAGCTCAA+GGG | - | chr7_2:61113742-61113761 | Msa1066950:intron | 25.0% |
| ! | CAAAGCTGGTTAAAATAAAT+TGG | + | chr7_2:61114249-61114268 | None:intergenic | 25.0% |
| !!! | CTCTTTGATCACATTTTTTA+AGG | + | chr7_2:61114290-61114309 | None:intergenic | 25.0% |
| ! | AAGACCAATAATACAGAAAA+CGG | + | chr7_2:61114400-61114419 | None:intergenic | 25.0% |
| ! | TTCAGCAAAAAGTTGAAATA+GGG | - | chr7_2:61114546-61114565 | Msa1066950:intron | 25.0% |
| !! | TTTTTCAGCTTAACTGCAAA+TGG | + | chr7_2:61111076-61111095 | None:intergenic | 30.0% |
| TGCACATAGTAAATACTTTC+TGG | - | chr7_2:61111430-61111449 | Msa1066950:intron | 30.0% | |
| ! | TGTGCTATGTTTTGTGTTTT+TGG | - | chr7_2:61111496-61111515 | Msa1066950:intron | 30.0% |
| AGTTTATGTATCTTAAGACG+AGG | - | chr7_2:61111568-61111587 | Msa1066950:intron | 30.0% | |
| ! | AGGTATTCGATTTGAATTCT+GGG | - | chr7_2:61111588-61111607 | Msa1066950:intron | 30.0% |
| !!! | GTGTAAAAGTTTTTTACGCA+TGG | - | chr7_2:61111654-61111673 | Msa1066950:intron | 30.0% |
| TAGATACATAAAGAGTAGTC+TGG | - | chr7_2:61112150-61112169 | Msa1066950:intron | 30.0% | |
| CATAATAATAGGCTTCAACT+TGG | + | chr7_2:61112712-61112731 | None:intergenic | 30.0% | |
| ! | CAAGTTGAAGCCTATTATTA+TGG | - | chr7_2:61112710-61112729 | Msa1066950:intron | 30.0% |
| AGCCTATTATTATGGAAGAA+TGG | - | chr7_2:61112718-61112737 | Msa1066950:intron | 30.0% | |
| GCCTATTATTATGGAAGAAT+GGG | - | chr7_2:61112719-61112738 | Msa1066950:intron | 30.0% | |
| CCTATTATTATGGAAGAATG+GGG | - | chr7_2:61112720-61112739 | Msa1066950:intron | 30.0% | |
| !! | GTTGATAGATCTTTTTGGAA+AGG | - | chr7_2:61112758-61112777 | Msa1066950:intron | 30.0% |
| !!! | CGGTTCAACTTTTAAAACAT+TGG | + | chr7_2:61112887-61112906 | None:intergenic | 30.0% |
| TTATTTGAACGGTTCAATCA+TGG | + | chr7_2:61112977-61112996 | None:intergenic | 30.0% | |
| CTAAAGTTCGGTTATTTGAA+CGG | + | chr7_2:61112988-61113007 | None:intergenic | 30.0% | |
| ATATCTCCACAGAATGATTT+AGG | + | chr7_2:61113101-61113120 | None:intergenic | 30.0% | |
| AACATGAATCCATGAACATT+CGG | - | chr7_2:61113126-61113145 | Msa1066950:CDS | 30.0% | |
| TTATATCCGTCTTTGTATTC+TGG | - | chr7_2:61113346-61113365 | Msa1066950:CDS | 30.0% | |
| ! | GGTTTTTGTTAATTCGGTTT+TGG | + | chr7_2:61113521-61113540 | None:intergenic | 30.0% |
| AAACCGAATTAACAAAAACC+TGG | - | chr7_2:61113521-61113540 | Msa1066950:intron | 30.0% | |
| CATTAAAATTTGCAAGCTCA+AGG | - | chr7_2:61113741-61113760 | Msa1066950:intron | 30.0% | |
| ATATATCCTTTCAGATGGTA+TGG | + | chr7_2:61113946-61113965 | None:intergenic | 30.0% | |
| ATACCATCTGAAAGGATATA+TGG | - | chr7_2:61113945-61113964 | Msa1066950:intron | 30.0% | |
| !! | TGCTTTAGAATTTCTACCTT+GGG | + | chr7_2:61114091-61114110 | None:intergenic | 30.0% |
| TTATGTGAATTTGCCAAAGA+TGG | - | chr7_2:61114202-61114221 | Msa1066950:intron | 30.0% | |
| !!! | TATTTTAACCAGCTTTGTTG+AGG | - | chr7_2:61114252-61114271 | Msa1066950:intron | 30.0% |
| AAATTCCATTTGTCTAACTC+AGG | + | chr7_2:61114313-61114332 | None:intergenic | 30.0% | |
| GACAAATGGAATTTGTATCT+AGG | - | chr7_2:61114319-61114338 | Msa1066950:intron | 30.0% | |
| AGACCAATAATACAGAAAAC+GGG | + | chr7_2:61114399-61114418 | None:intergenic | 30.0% | |
| !! | ACTTGATAATGATGACTGTT+TGG | - | chr7_2:61114438-61114457 | Msa1066950:CDS | 30.0% |
| CTTCAGCAAAAAGTTGAAAT+AGG | - | chr7_2:61114545-61114564 | Msa1066950:intron | 30.0% | |
| TCAGCAAAAAGTTGAAATAG+GGG | - | chr7_2:61114547-61114566 | Msa1066950:intron | 30.0% | |
| ! | GAGGTATTCGATTTGAATTC+TGG | - | chr7_2:61111587-61111606 | Msa1066950:intron | 35.0% |
| CATACATAGTGATGTGTGAT+TGG | + | chr7_2:61111682-61111701 | None:intergenic | 35.0% | |
| GCACAGAATAAGCTTGAATT+TGG | - | chr7_2:61111899-61111918 | Msa1066950:CDS | 35.0% | |
| !!! | CAATTTGGATTTTGGAACGA+TGG | - | chr7_2:61112093-61112112 | Msa1066950:CDS | 35.0% |
| !!! | ATTTTGGAACGATGGAGAAT+TGG | - | chr7_2:61112101-61112120 | Msa1066950:intron | 35.0% |
| TACTATGATGCGTGAATTTG+AGG | - | chr7_2:61112196-61112215 | Msa1066950:intron | 35.0% | |
| ! | TATTTCTATTGCCAAATGGC+TGG | - | chr7_2:61112367-61112386 | Msa1066950:intron | 35.0% |
| ! | ATGAAAACCTTTTACTTGCG+AGG | - | chr7_2:61112464-61112483 | Msa1066950:intron | 35.0% |
| CCCCATTCTTCCATAATAAT+AGG | + | chr7_2:61112723-61112742 | None:intergenic | 35.0% | |
| !!! | GAAGCGTTGATAGATCTTTT+TGG | - | chr7_2:61112753-61112772 | Msa1066950:intron | 35.0% |
| !! | TAGATCTTTTTGGAAAGGTC+AGG | - | chr7_2:61112763-61112782 | Msa1066950:intron | 35.0% |
| !! | AGATCTTTTTGGAAAGGTCA+GGG | - | chr7_2:61112764-61112783 | Msa1066950:intron | 35.0% |
| ! | TTTGAATGGTTTAGAGCAGT+TGG | + | chr7_2:61112943-61112962 | None:intergenic | 35.0% |
| ! | ACCAGTTGAAATGTCTTGTT+TGG | - | chr7_2:61113029-61113048 | Msa1066950:CDS | 35.0% |
| ACCAAACAAGACATTTCAAC+TGG | + | chr7_2:61113033-61113052 | None:intergenic | 35.0% | |
| GAGAAACCTAAATCATTCTG+TGG | - | chr7_2:61113092-61113111 | Msa1066950:CDS | 35.0% | |
| TCTCATAAACCGAATGTTCA+TGG | + | chr7_2:61113138-61113157 | None:intergenic | 35.0% | |
| ACATATGTTCAATCTTGCAC+TGG | + | chr7_2:61113165-61113184 | None:intergenic | 35.0% | |
| ! | AGGACATGTTGTGATTCTTT+TGG | - | chr7_2:61113252-61113271 | Msa1066950:intron | 35.0% |
| TCCTAGAATATCATCTCCAA+CGG | + | chr7_2:61113320-61113339 | None:intergenic | 35.0% | |
| GCATAACCAGAATACAAAGA+CGG | + | chr7_2:61113355-61113374 | None:intergenic | 35.0% | |
| !! | ATCCTGCTGTATTGCTATTT+AGG | - | chr7_2:61113421-61113440 | Msa1066950:intron | 35.0% |
| !! | TCCTGCTGTATTGCTATTTA+GGG | - | chr7_2:61113422-61113441 | Msa1066950:intron | 35.0% |
| TTTAATGCATCAGAAACACC+AGG | + | chr7_2:61113728-61113747 | None:intergenic | 35.0% | |
| TTTCATTGTCACCACAAAAC+AGG | - | chr7_2:61113766-61113785 | Msa1066950:intron | 35.0% | |
| ! | AGCAAAGTTTACCTGTTTTG+TGG | + | chr7_2:61113780-61113799 | None:intergenic | 35.0% |
| TTTGCTCTTTACCCTAGTAA+GGG | - | chr7_2:61113794-61113813 | Msa1066950:intron | 35.0% | |
| ATAAGAGGGGATGAAGTAAT+TGG | - | chr7_2:61113864-61113883 | Msa1066950:intron | 35.0% | |
| ! | GAAGTAAAGCATCAGCAAAT+CGG | + | chr7_2:61113905-61113924 | None:intergenic | 35.0% |
| AGACCATATATCCTTTCAGA+TGG | + | chr7_2:61113951-61113970 | None:intergenic | 35.0% | |
| ATCTGAAAGGATATATGGTC+TGG | - | chr7_2:61113950-61113969 | Msa1066950:intron | 35.0% | |
| TCTGAAAGGATATATGGTCT+GGG | - | chr7_2:61113951-61113970 | Msa1066950:intron | 35.0% | |
| !! | CTGCTTTAGAATTTCTACCT+TGG | + | chr7_2:61114092-61114111 | None:intergenic | 35.0% |
| AATATCTCGAAGACCATCTT+TGG | + | chr7_2:61114218-61114237 | None:intergenic | 35.0% | |
| ! | GTTCCCGTTTTCTGTATTAT+TGG | - | chr7_2:61114393-61114412 | Msa1066950:intron | 35.0% |
| TAATGATGACTGTTTGGATC+AGG | - | chr7_2:61114444-61114463 | Msa1066950:CDS | 35.0% | |
| AATGATGACTGTTTGGATCA+GGG | - | chr7_2:61114445-61114464 | Msa1066950:CDS | 35.0% | |
| AGCTGAAGAACTTGAATTCT+GGG | + | chr7_2:61114519-61114538 | None:intergenic | 35.0% | |
| TGCAGTTAAGCTGAAAAAGC+AGG | - | chr7_2:61111078-61111097 | Msa1066950:three_prime_UTR | 40.0% | |
| AGTTAAGCTGAAAAAGCAGG+AGG | - | chr7_2:61111081-61111100 | Msa1066950:three_prime_UTR | 40.0% | |
| AAAGCAGGAGGAAAGTGAAA+TGG | - | chr7_2:61111093-61111112 | Msa1066950:three_prime_UTR | 40.0% | |
| AAGCAGGAGGAAAGTGAAAT+GGG | - | chr7_2:61111094-61111113 | Msa1066950:three_prime_UTR | 40.0% | |
| TGTCTTAGTCTCAGCTGTTA+TGG | - | chr7_2:61111759-61111778 | Msa1066950:intron | 40.0% | |
| TGTACTACTGTGCTATGCTT+TGG | - | chr7_2:61111789-61111808 | Msa1066950:intron | 40.0% | |
| AGTGAGTTAAGGCACATTAG+AGG | + | chr7_2:61112025-61112044 | None:intergenic | 40.0% | |
| !! | AGAGTGGATTAGTAGCATCT+TGG | + | chr7_2:61112177-61112196 | None:intergenic | 40.0% |
| ATTCACGCATCATAGTAGAG+TGG | + | chr7_2:61112193-61112212 | None:intergenic | 40.0% | |
| TGAAATCAAGTCCAGCCATT+TGG | + | chr7_2:61112381-61112400 | None:intergenic | 40.0% | |
| TCATATCCAGTTTCCACTAC+CGG | + | chr7_2:61112448-61112467 | None:intergenic | 40.0% | |
| !! | TAAACCTAGCTTTAGCTACG+TGG | + | chr7_2:61112572-61112591 | None:intergenic | 40.0% |
| GATGTCATTGTTCTTGTGCA+AGG | - | chr7_2:61112644-61112663 | Msa1066950:intron | 40.0% | |
| ACTCTCCAATATACCCTCAA+CGG | + | chr7_2:61112685-61112704 | None:intergenic | 40.0% | |
| ! | TTGAGGGTATATTGGAGAGT+TGG | - | chr7_2:61112685-61112704 | Msa1066950:intron | 40.0% |
| ! | CTGCTCTAAACCATTCAAAC+CGG | - | chr7_2:61112944-61112963 | Msa1066950:intron | 40.0% |
| ! | TGCTCTAAACCATTCAAACC+GGG | - | chr7_2:61112945-61112964 | Msa1066950:intron | 40.0% |
| !!! | GTTCAATCATGGTTTTGTCC+CGG | + | chr7_2:61112966-61112985 | None:intergenic | 40.0% |
| ! | AACGGACACTGTCTAAAGTT+CGG | + | chr7_2:61113000-61113019 | None:intergenic | 40.0% |
| TCAACTGGTTGAACCATGAA+CGG | + | chr7_2:61113018-61113037 | None:intergenic | 40.0% | |
| TAGGTTTCTCATCATGCATC+TGG | + | chr7_2:61113082-61113101 | None:intergenic | 40.0% | |
| GTTAGACAAGTGGCTGAATT+GGG | + | chr7_2:61113194-61113213 | None:intergenic | 40.0% | |
| AGTTAGACAAGTGGCTGAAT+TGG | + | chr7_2:61113195-61113214 | None:intergenic | 40.0% | |
| CACTTGTCTAACTTGAGAGT+GGG | - | chr7_2:61113202-61113221 | Msa1066950:intron | 40.0% | |
| ! | GTTGTGATTCTTTTGGACTG+TGG | - | chr7_2:61113259-61113278 | Msa1066950:intron | 40.0% |
| TCCGTTGGAGATGATATTCT+AGG | - | chr7_2:61113316-61113335 | Msa1066950:CDS | 40.0% | |
| !! | CCTGCTGTATTGCTATTTAG+GGG | - | chr7_2:61113423-61113442 | Msa1066950:intron | 40.0% |
| CAAAAACCTGGTTTCGGATA+TGG | - | chr7_2:61113533-61113552 | Msa1066950:intron | 40.0% | |
| TCGGATATGGTTGTAGTTTG+TGG | - | chr7_2:61113546-61113565 | Msa1066950:intron | 40.0% | |
| ATATTCAGCCAACAGGAGTA+GGG | + | chr7_2:61113596-61113615 | None:intergenic | 40.0% | |
| AATATTCAGCCAACAGGAGT+AGG | + | chr7_2:61113597-61113616 | None:intergenic | 40.0% | |
| GATGTCAATATTCAGCCAAC+AGG | + | chr7_2:61113603-61113622 | None:intergenic | 40.0% | |
| CTTTGCTCTTTACCCTAGTA+AGG | - | chr7_2:61113793-61113812 | Msa1066950:intron | 40.0% | |
| ACTCTCTATTGTTGCGATCA+TGG | + | chr7_2:61113822-61113841 | None:intergenic | 40.0% | |
| GAGTAACCATACCATCTGAA+AGG | - | chr7_2:61113937-61113956 | Msa1066950:intron | 40.0% | |
| !! | TTATTTTACCCACAGTCCCA+AGG | - | chr7_2:61114072-61114091 | Msa1066950:intron | 40.0% |
| AATTTCTACCTTGGGACTGT+GGG | + | chr7_2:61114083-61114102 | None:intergenic | 40.0% | |
| ! | TAGCAGCACTCAATGTCTTT+TGG | - | chr7_2:61114169-61114188 | Msa1066950:intron | 40.0% |
| !! | TAACCAGCTTTGTTGAGGAT+CGG | - | chr7_2:61114257-61114276 | Msa1066950:intron | 40.0% |
| AAGAGCCTGAGTTAGACAAA+TGG | - | chr7_2:61114305-61114324 | Msa1066950:intron | 40.0% | |
| ACTGAGACAAAAATGAGGGA+GGG | + | chr7_2:61114375-61114394 | None:intergenic | 40.0% | |
| AACTGAGACAAAAATGAGGG+AGG | + | chr7_2:61114376-61114395 | None:intergenic | 40.0% | |
| GGGAACTGAGACAAAAATGA+GGG | + | chr7_2:61114379-61114398 | None:intergenic | 40.0% | |
| ACTGTTTGGATCAGGGAATT+GGG | - | chr7_2:61114452-61114471 | Msa1066950:CDS | 40.0% | |
| GCTGAAGAACTTGAATTCTG+GGG | + | chr7_2:61114518-61114537 | None:intergenic | 40.0% | |
| GAGCTGAAGAACTTGAATTC+TGG | + | chr7_2:61114520-61114539 | None:intergenic | 40.0% | |
| AATGGGAGAGCTTTACGCTT+TGG | - | chr7_2:61111111-61111130 | Msa1066950:three_prime_UTR | 45.0% | |
| ! | CTTTACGCTTTGGACTTCGA+TGG | - | chr7_2:61111121-61111140 | Msa1066950:three_prime_UTR | 45.0% |
| !! | AGATGGCCTGGTTTGTTTGA+TGG | - | chr7_2:61111369-61111388 | Msa1066950:intron | 45.0% |
| !! | GATGGCCTGGTTTGTTTGAT+GGG | - | chr7_2:61111370-61111389 | Msa1066950:intron | 45.0% |
| !! | ATGGCCTGGTTTGTTTGATG+GGG | - | chr7_2:61111371-61111390 | Msa1066950:intron | 45.0% |
| TGGATTCAGCTACAGAGGAT+TGG | - | chr7_2:61111394-61111413 | Msa1066950:intron | 45.0% | |
| AGATATCAGGGTTTAGACCC+TGG | - | chr7_2:61111998-61112017 | Msa1066950:intron | 45.0% | |
| TAAGGCACATTAGAGGTCCA+GGG | + | chr7_2:61112018-61112037 | None:intergenic | 45.0% | |
| TTAAGGCACATTAGAGGTCC+AGG | + | chr7_2:61112019-61112038 | None:intergenic | 45.0% | |
| GCAACAACCTCGCAAGTAAA+AGG | + | chr7_2:61112474-61112493 | None:intergenic | 45.0% | |
| ACTACCACGTAGCTAAAGCT+AGG | - | chr7_2:61112565-61112584 | Msa1066950:intron | 45.0% | |
| TTCTTGTGCAAGGTTGCAGA+GGG | - | chr7_2:61112654-61112673 | Msa1066950:intron | 45.0% | |
| TGGAAGAATGGGGTGAGAAT+AGG | - | chr7_2:61112730-61112749 | Msa1066950:intron | 45.0% | |
| GGAAGAATGGGGTGAGAATA+GGG | - | chr7_2:61112731-61112750 | Msa1066950:intron | 45.0% | |
| TTGGAAAGGTCAGGGATGAA+TGG | - | chr7_2:61112772-61112791 | Msa1066950:intron | 45.0% | |
| AAAGGTCAGGGATGAATGGT+TGG | - | chr7_2:61112776-61112795 | Msa1066950:intron | 45.0% | |
| !! | CAGGATTTTGCTGCTTGGAT+TGG | - | chr7_2:61112801-61112820 | Msa1066950:intron | 45.0% |
| AGTTGAACCGTACATCGAAC+TGG | - | chr7_2:61112897-61112916 | Msa1066950:intron | 45.0% | |
| !!! | TGGTTTTGTCCCGGTTTGAA+TGG | + | chr7_2:61112957-61112976 | None:intergenic | 45.0% |
| CTTTAGACAGTGTCCGTTCA+TGG | - | chr7_2:61113002-61113021 | Msa1066950:intron | 45.0% | |
| CCACTCTCAAGTTAGACAAG+TGG | + | chr7_2:61113204-61113223 | None:intergenic | 45.0% | |
| CCACTTGTCTAACTTGAGAG+TGG | - | chr7_2:61113201-61113220 | Msa1066950:intron | 45.0% | |
| AGTGGGAGATCCGTTAGATT+GGG | - | chr7_2:61113219-61113238 | Msa1066950:intron | 45.0% | |
| ACTCTACTCCCCCAATCTAA+CGG | + | chr7_2:61113232-61113251 | None:intergenic | 45.0% | |
| TTAGATTGGGGGAGTAGAGT+AGG | - | chr7_2:61113232-61113251 | Msa1066950:intron | 45.0% | |
| CGGAACTTCCTTGAACAGAA+AGG | + | chr7_2:61113300-61113319 | None:intergenic | 45.0% | |
| TCTGTTCAAGGAAGTTCCGT+TGG | - | chr7_2:61113301-61113320 | Msa1066950:intron | 45.0% | |
| CCCCTAAATAGCAATACAGC+AGG | + | chr7_2:61113426-61113445 | None:intergenic | 45.0% | |
| CTACAACCATATCCGAAACC+AGG | + | chr7_2:61113542-61113561 | None:intergenic | 45.0% | |
| ! | TGTAGTTTGTGGCTTCCAAC+CGG | - | chr7_2:61113557-61113576 | Msa1066950:intron | 45.0% |
| GTAGGGGTGAGCAAAATATC+CGG | + | chr7_2:61113579-61113598 | None:intergenic | 45.0% | |
| TATTCAGCCAACAGGAGTAG+GGG | + | chr7_2:61113595-61113614 | None:intergenic | 45.0% | |
| CGATCATGGTTCCCTTACTA+GGG | + | chr7_2:61113808-61113827 | None:intergenic | 45.0% | |
| GAATTTCTACCTTGGGACTG+TGG | + | chr7_2:61114084-61114103 | None:intergenic | 45.0% | |
| ! | AAAAGAGACCAGAGCACCAA+GGG | - | chr7_2:61114116-61114135 | Msa1066950:intron | 45.0% |
| CGGGAACTGAGACAAAAATG+AGG | + | chr7_2:61114380-61114399 | None:intergenic | 45.0% | |
| GACTGTTTGGATCAGGGAAT+TGG | - | chr7_2:61114451-61114470 | Msa1066950:CDS | 45.0% | |
| CTGTTTGGATCAGGGAATTG+GGG | - | chr7_2:61114453-61114472 | Msa1066950:CDS | 45.0% | |
| !! | ATTTGATTATTATAATAATA+AGG | - | chr7_2:61111828-61111847 | Msa1066950:intron | 5.0% |
| !! | TTTGATTATTATAATAATAA+GGG | - | chr7_2:61111829-61111848 | Msa1066950:intron | 5.0% |
| GGAGTCATCTGTGATAGCTG+CGG | - | chr7_2:61111142-61111161 | Msa1066950:three_prime_UTR | 50.0% | |
| AAGCTCTCTCTCTGCTCTCA+AGG | - | chr7_2:61111168-61111187 | Msa1066950:three_prime_UTR | 50.0% | |
| AGAGAGAGAGAGAGAGATGG+AGG | + | chr7_2:61111196-61111215 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | + | chr7_2:61111199-61111218 | None:intergenic | 50.0% | |
| TGCAGGCTGCTAAAGTGAGA+TGG | - | chr7_2:61111352-61111371 | Msa1066950:CDS | 50.0% | |
| TCCACCCCATCAAACAAACC+AGG | + | chr7_2:61111378-61111397 | None:intergenic | 50.0% | |
| TTGTTCATGTCAGGTGCGAC+CGG | - | chr7_2:61112426-61112445 | Msa1066950:intron | 50.0% | |
| ACCGAAGACTTCCTGATGGA+CGG | + | chr7_2:61112511-61112530 | None:intergenic | 50.0% | |
| TCCATCAGGAAGTCTTCGGT+GGG | - | chr7_2:61112511-61112530 | Msa1066950:intron | 50.0% | |
| GTTCTTGTGCAAGGTTGCAG+AGG | - | chr7_2:61112653-61112672 | Msa1066950:intron | 50.0% | |
| TCTTGTGCAAGGTTGCAGAG+GGG | - | chr7_2:61112655-61112674 | Msa1066950:intron | 50.0% | |
| ! | GCTTGCCGTTGAGGGTATAT+TGG | - | chr7_2:61112677-61112696 | Msa1066950:intron | 50.0% |
| ! | TGGAGCAGGATTTTGCTGCT+TGG | - | chr7_2:61112796-61112815 | Msa1066950:intron | 50.0% |
| !! | CTGCTTGGATTGGTGCAAAC+AGG | - | chr7_2:61112811-61112830 | Msa1066950:intron | 50.0% |
| TTCCTCTGTCAAGGGACGAT+TGG | + | chr7_2:61112841-61112860 | None:intergenic | 50.0% | |
| GAGTGGGAGATCCGTTAGAT+TGG | - | chr7_2:61113218-61113237 | Msa1066950:intron | 50.0% | |
| GTGGGAGATCCGTTAGATTG+GGG | - | chr7_2:61113220-61113239 | Msa1066950:intron | 50.0% | |
| TGGGAGATCCGTTAGATTGG+GGG | - | chr7_2:61113221-61113240 | Msa1066950:intron | 50.0% | |
| GGGTGAGCAAAATATCCGGT+TGG | + | chr7_2:61113575-61113594 | None:intergenic | 50.0% | |
| GCGATCATGGTTCCCTTACT+AGG | + | chr7_2:61113809-61113828 | None:intergenic | 50.0% | |
| GCTTTACTTCGAGAGCTTGC+TGG | - | chr7_2:61113915-61113934 | Msa1066950:intron | 50.0% | |
| AGGATATATGGTCTGGGCAC+TGG | - | chr7_2:61113957-61113976 | Msa1066950:intron | 50.0% | |
| GGATATATGGTCTGGGCACT+GGG | - | chr7_2:61113958-61113977 | Msa1066950:intron | 50.0% | |
| ! | CAAAAGAGACCAGAGCACCA+AGG | - | chr7_2:61114115-61114134 | Msa1066950:intron | 50.0% |
| TAGCCGATCCTCAACAAAGC+TGG | + | chr7_2:61114263-61114282 | None:intergenic | 50.0% | |
| TTGGGGTTACAACACTGCAC+AGG | - | chr7_2:61114470-61114489 | Msa1066950:intron | 50.0% | |
| CAACACTGCACAGGAGAAAG+AGG | - | chr7_2:61114479-61114498 | Msa1066950:intron | 50.0% | |
| GCTGCTAAAGTGAGATGGCC+TGG | - | chr7_2:61111357-61111376 | Msa1066950:intron | 55.0% | |
| !! | GCCTGGTTTGTTTGATGGGG+TGG | - | chr7_2:61111374-61111393 | Msa1066950:intron | 55.0% |
| ! | TGGGGTGGATTCAGCTACAG+AGG | - | chr7_2:61111389-61111408 | Msa1066950:intron | 55.0% |
| ! | CGAAGACTTCCTGATGGACG+GGG | + | chr7_2:61112509-61112528 | None:intergenic | 55.0% |
| ! | CCGAAGACTTCCTGATGGAC+GGG | + | chr7_2:61112510-61112529 | None:intergenic | 55.0% |
| CCCGTCCATCAGGAAGTCTT+CGG | - | chr7_2:61112507-61112526 | Msa1066950:intron | 55.0% | |
| GTCCATCAGGAAGTCTTCGG+TGG | - | chr7_2:61112510-61112529 | Msa1066950:intron | 55.0% | |
| ACCCACCGAAGACTTCCTGA+TGG | + | chr7_2:61112515-61112534 | None:intergenic | 55.0% | |
| CAGGGATGAATGGTTGGAGC+AGG | - | chr7_2:61112782-61112801 | Msa1066950:intron | 55.0% | |
| GTCCAATCGTCCCTTGACAG+AGG | - | chr7_2:61112836-61112855 | Msa1066950:intron | 55.0% | |
| GGTCTCGCCAGTTCGATGTA+CGG | + | chr7_2:61112907-61112926 | None:intergenic | 55.0% | |
| ATCGAACTGGCGAGACCTCT+GGG | - | chr7_2:61112910-61112929 | Msa1066950:intron | 55.0% | |
| GCAGTTGGATCATGACCCAG+AGG | + | chr7_2:61112928-61112947 | None:intergenic | 55.0% | |
| TTGCTCACCCCTACTCCTGT+TGG | - | chr7_2:61113585-61113604 | Msa1066950:intron | 55.0% | |
| CTTACTGCAGTGTCAGCCCT+TGG | + | chr7_2:61114135-61114154 | None:intergenic | 55.0% | |
| ATGTCAGGTGCGACCGGTAG+TGG | - | chr7_2:61112432-61112451 | Msa1066950:intron | 60.0% | |
| !! | GTGCGACCGGTAGTGGAAAC+TGG | - | chr7_2:61112439-61112458 | Msa1066950:intron | 60.0% |
| AGACCAGAACCCCGTCCATC+AGG | - | chr7_2:61112497-61112516 | Msa1066950:intron | 60.0% | |
| ! | CTTCCTGATGGACGGGGTTC+TGG | + | chr7_2:61112503-61112522 | None:intergenic | 60.0% |
| CATCGAACTGGCGAGACCTC+TGG | - | chr7_2:61112909-61112928 | Msa1066950:intron | 60.0% | |
| !! | AGTGTCAGCCCTTGGTGCTC+TGG | + | chr7_2:61114127-61114146 | None:intergenic | 60.0% |
| TGCAGAGGGGCTTGCCGTTG+AGG | - | chr7_2:61112668-61112687 | Msa1066950:intron | 65.0% | |
| GCAGAGGGGCTTGCCGTTGA+GGG | - | chr7_2:61112669-61112688 | Msa1066950:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 61111044 | 61114793 | 61111044 | ID=Msa1066950;Name=Msa1066950 |
| chr7_2 | mRNA | 61111044 | 61114793 | 61111044 | ID=Msa1066950-mRNA-1;Parent=Msa1066950;Name=Msa1066950-mRNA-1;_AED=0.37;_eAED=0.37;_QI=68|1|1|1|1|1|9|227|268 |
| chr7_2 | exon | 61111044 | 61111371 | 61111044 | ID=Msa1066950-mRNA-1:exon:12299;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61111497 | 61111573 | 61111497 | ID=Msa1066950-mRNA-1:exon:12298;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61111688 | 61111750 | 61111688 | ID=Msa1066950-mRNA-1:exon:12297;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61111858 | 61111937 | 61111858 | ID=Msa1066950-mRNA-1:exon:12296;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61112050 | 61112119 | 61112050 | ID=Msa1066950-mRNA-1:exon:12295;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61113005 | 61113171 | 61113005 | ID=Msa1066950-mRNA-1:exon:12294;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61113309 | 61113398 | 61113309 | ID=Msa1066950-mRNA-1:exon:12293;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61114400 | 61114480 | 61114400 | ID=Msa1066950-mRNA-1:exon:12292;Parent=Msa1066950-mRNA-1 |
| chr7_2 | exon | 61114648 | 61114793 | 61114648 | ID=Msa1066950-mRNA-1:exon:12291;Parent=Msa1066950-mRNA-1 |
| chr7_2 | five_prime_UTR | 61114726 | 61114793 | 61114726 | ID=Msa1066950-mRNA-1:five_prime_utr;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61114648 | 61114725 | 61114648 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61114400 | 61114480 | 61114400 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61113309 | 61113398 | 61113309 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61113005 | 61113171 | 61113005 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61112050 | 61112119 | 61112050 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61111858 | 61111937 | 61111858 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61111688 | 61111750 | 61111688 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61111497 | 61111573 | 61111497 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | CDS | 61111271 | 61111371 | 61111271 | ID=Msa1066950-mRNA-1:cds;Parent=Msa1066950-mRNA-1 |
| chr7_2 | three_prime_UTR | 61111044 | 61111270 | 61111044 | ID=Msa1066950-mRNA-1:three_prime_utr;Parent=Msa1066950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
