Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032590 | XP_024625631.1 | 89.965 | 857 | 53 | 7 | 1 | 831 | 1 | 850 | 0.0 | 1380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032590 | sp|Q9LD55|EIF3A_ARATH | 60.884 | 905 | 274 | 10 | 1 | 828 | 1 | 902 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032590 | A0A396H2J3 | 89.965 | 857 | 53 | 7 | 1 | 831 | 1 | 850 | 0.0 | 1380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1032590 | Msa1072380 | 0.828743 | 7.588860e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032590 | MtrunA17_Chr7g0254441 | 89.965 | 857 | 53 | 7 | 1 | 831 | 1 | 850 | 0.0 | 1380 |
| Msa1032590 | MtrunA17_Chr7g0262991 | 72.429 | 914 | 161 | 12 | 1 | 831 | 1 | 906 | 0.0 | 1162 |
| Msa1032590 | MtrunA17_Chr7g0262301 | 62.581 | 155 | 29 | 3 | 618 | 743 | 53 | 207 | 3.81e-39 | 144 |
| Msa1032590 | MtrunA17_Chr7g0234611 | 52.381 | 168 | 61 | 4 | 510 | 677 | 1 | 149 | 8.33e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1032590 | AT4G11420.1 | 60.884 | 905 | 274 | 10 | 1 | 828 | 1 | 902 | 0.0 | 951 |
Find 183 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATAAAATTTCAAAATT+AGG | 0.044115 | 7_1:+67553177 | Msa1032590:CDS |
| ACGGAGTTTCTTACTGTTTC+TGG | 0.091295 | 7_1:-67550438 | None:intergenic |
| TTAAGTTGATCGAAATATTT+TGG | 0.143698 | 7_1:+67551959 | Msa1032590:CDS |
| TAAATAAAATTTCAAAATTA+GGG | 0.184400 | 7_1:+67553178 | Msa1032590:CDS |
| TATAAAACTAAAATGGATTT+TGG | 0.196428 | 7_1:-67555806 | None:intergenic |
| GACCGAACGCTTAGCGAAAT+TGG | 0.228268 | 7_1:+67555445 | Msa1032590:CDS |
| AATTTCTCTGGGAAACTTAC+AGG | 0.229054 | 7_1:+67551158 | Msa1032590:CDS |
| TTGATTGTATAAAACTAAAA+TGG | 0.238213 | 7_1:-67555813 | None:intergenic |
| AGATACAATGGCAAGCTTTC+AGG | 0.241537 | 7_1:-67551706 | None:intergenic |
| GAAGGACATTTACTATCTTT+TGG | 0.243392 | 7_1:+67553107 | Msa1032590:CDS |
| CTGAGACGTTCTTAGATTAC+AGG | 0.261287 | 7_1:+67555782 | Msa1032590:three_prime_UTR |
| CCCTATCGTTTAAATTTCTC+TGG | 0.262543 | 7_1:+67551146 | Msa1032590:CDS |
| TTTGCTCCCATCTTTGTTAG+AGG | 0.270180 | 7_1:+67554096 | Msa1032590:CDS |
| GCAAGTGAATGTTTGTTCTT+TGG | 0.276030 | 7_1:+67550937 | Msa1032590:CDS |
| CGACGGGCAGGAGGCTTATA+AGG | 0.293713 | 7_1:-67555575 | None:intergenic |
| GGAATGTATTTCCCTGGAGC+TGG | 0.300289 | 7_1:-67555641 | None:intergenic |
| AGCTTCTTCGTGTTCTCTTT+CGG | 0.303241 | 7_1:-67554401 | None:intergenic |
| CCCATCTTTGTTAGAGGTTG+TGG | 0.305502 | 7_1:+67554102 | Msa1032590:CDS |
| AAGGAGAATCTTGTGATCTT+TGG | 0.317744 | 7_1:-67554125 | None:intergenic |
| AATATAGTGAATTCACAATA+TGG | 0.317771 | 7_1:+67550611 | Msa1032590:exon |
| AGAAAGAGAAGTTGAAGAAA+AGG | 0.331406 | 7_1:+67555496 | Msa1032590:CDS |
| AGCTCCTCCTCGTCGGAACT+TGG | 0.356046 | 7_1:-67555663 | None:intergenic |
| GCTGGGGCTGAGGAAGTTGC+AGG | 0.363243 | 7_1:-67555623 | None:intergenic |
| ACTTCCTCAGCCCCAGCTCC+AGG | 0.363439 | 7_1:+67555629 | Msa1032590:CDS |
| TTCTGCTGAACAGTTGAATA+AGG | 0.364744 | 7_1:+67554024 | Msa1032590:CDS |
| GGCCTCAAAGCTGGTTCGTT+GGG | 0.365386 | 7_1:-67555554 | None:intergenic |
| ATAAACTACATAAATATCTT+AGG | 0.368043 | 7_1:-67555882 | None:intergenic |
| ATGACTTAGAGGCGGATAAA+AGG | 0.374278 | 7_1:+67551053 | Msa1032590:CDS |
| AGATCTGAGTCAGAAGGATT+TGG | 0.375815 | 7_1:+67552053 | Msa1032590:CDS |
| GTCTTGAGGCTGATGGCTTA+AGG | 0.376513 | 7_1:+67553987 | Msa1032590:CDS |
| CCTCGATGTTGATGACTTAG+AGG | 0.380642 | 7_1:+67551042 | Msa1032590:CDS |
| TACCCTGAGGTTGCTACAAC+AGG | 0.382355 | 7_1:+67553275 | Msa1032590:CDS |
| GAGGAAGTTGCAGGTGCAGC+AGG | 0.385636 | 7_1:-67555614 | None:intergenic |
| TGAAATCTTAAGAAACCATT+TGG | 0.388442 | 7_1:+67551633 | Msa1032590:CDS |
| ATTCAACTGTTCAGCAGAAC+TGG | 0.388584 | 7_1:-67554020 | None:intergenic |
| TTGAGGATGGCTAATCTCAT+TGG | 0.391443 | 7_1:+67552165 | Msa1032590:CDS |
| GTCATCACTTCTTGCTGAAC+TGG | 0.394710 | 7_1:+67552330 | Msa1032590:CDS |
| GGCTTATCTTAACAAATATC+CGG | 0.405384 | 7_1:+67551654 | Msa1032590:CDS |
| TTCTTACTGTTTCTGGTGGC+CGG | 0.411645 | 7_1:-67550431 | None:intergenic |
| CCAGAGAAATTTAAACGATA+GGG | 0.419253 | 7_1:-67551146 | None:intergenic |
| AACCTGCCAGAGTTCAAGTT+TGG | 0.419446 | 7_1:-67551761 | None:intergenic |
| GAATGTATTTCCCTGGAGCT+GGG | 0.423482 | 7_1:-67555640 | None:intergenic |
| AAGGGAGGAATCCAGGAAAC+AGG | 0.423710 | 7_1:+67555031 | Msa1032590:CDS |
| ATGTAGTCAGGCTCGGGAAA+TGG | 0.424125 | 7_1:+67551012 | Msa1032590:CDS |
| TATGCAGAGTTAATCAATGT+TGG | 0.425125 | 7_1:+67550743 | Msa1032590:intron |
| TCTTGAGGCTGATGGCTTAA+GGG | 0.425941 | 7_1:+67553988 | Msa1032590:CDS |
| AGCCAATTTCGCTAAGCGTT+CGG | 0.426369 | 7_1:-67555447 | None:intergenic |
| AATGCTCTCAAAAGGGTAGA+AGG | 0.430296 | 7_1:+67550654 | Msa1032590:CDS |
| AGTTCTCAACCTTCATTGTC+TGG | 0.434370 | 7_1:-67553406 | None:intergenic |
| AAATGATATCTCCTCCTGAT+AGG | 0.436758 | 7_1:+67554053 | Msa1032590:CDS |
| ATGAAGGTTGAGAACTTAGC+TGG | 0.441312 | 7_1:+67553413 | Msa1032590:CDS |
| CAAAAGAGGGAAGCATTGTT+AGG | 0.441865 | 7_1:+67555527 | Msa1032590:CDS |
| TCAGGTCGGTCACGTTGATC+CGG | 0.445400 | 7_1:-67551673 | None:intergenic |
| GGAAGTTGAAGTATTATCTT+CGG | 0.445746 | 7_1:+67555069 | Msa1032590:CDS |
| TGTTTGTTCTTTGGAGGATG+TGG | 0.450506 | 7_1:+67550946 | Msa1032590:CDS |
| TACTGCGACAATTGTACCTC+TGG | 0.450975 | 7_1:-67553228 | None:intergenic |
| AAAGGACAGTTTGCAAAGGA+TGG | 0.453736 | 7_1:+67550887 | Msa1032590:CDS |
| TTGTCTCTCCACAGCTCTCA+AGG | 0.455430 | 7_1:+67552308 | Msa1032590:intron |
| AGCCTGAGAATGCTCTCAAA+AGG | 0.465917 | 7_1:+67550646 | Msa1032590:CDS |
| GGAGAGAAAGGGAGGAATCC+AGG | 0.466378 | 7_1:+67555024 | Msa1032590:CDS |
| TTTCTTGTCTCATCCTGAGT+TGG | 0.468065 | 7_1:-67554459 | None:intergenic |
| TCAGAAAGACTTAGAGTGTA+AGG | 0.468770 | 7_1:-67555763 | None:intergenic |
| ATGCAGAGTTAATCAATGTT+GGG | 0.471050 | 7_1:+67550744 | Msa1032590:intron |
| GCACCTGTTGTAGCAACCTC+AGG | 0.473099 | 7_1:-67553278 | None:intergenic |
| TTAACCGACTGAGGAGAGAA+AGG | 0.473318 | 7_1:+67555012 | Msa1032590:CDS |
| AAAAGGCTGAGAAGCAAAAG+AGG | 0.475380 | 7_1:+67555513 | Msa1032590:CDS |
| CACCAAACTTGAACTCTGGC+AGG | 0.477564 | 7_1:+67551759 | Msa1032590:CDS |
| TTTCCCTGGAGCTGGGGCTG+AGG | 0.477604 | 7_1:-67555633 | None:intergenic |
| CCCAGAGAAATTTAAACGAT+AGG | 0.481004 | 7_1:-67551147 | None:intergenic |
| GGCTTATAAGGCCTCAAAGC+TGG | 0.486004 | 7_1:-67555563 | None:intergenic |
| GGAAGGAGCGGCTTAGTCAT+AGG | 0.486494 | 7_1:+67554800 | Msa1032590:CDS |
| CAAAAGAAGCCGCGGAACAA+AGG | 0.492609 | 7_1:+67554317 | Msa1032590:CDS |
| GGATTAATTTCAGGCATCAA+AGG | 0.493326 | 7_1:+67553056 | Msa1032590:intron |
| GCCACAACCTCTAACAAAGA+TGG | 0.493344 | 7_1:-67554103 | None:intergenic |
| ACTCAGGATGAGACAAGAAA+TGG | 0.493462 | 7_1:+67554462 | Msa1032590:CDS |
| TATCAGAGTCTTGAGGCTGA+TGG | 0.495297 | 7_1:+67553980 | Msa1032590:intron |
| GATTAATTTCAGGCATCAAA+GGG | 0.496744 | 7_1:+67553057 | Msa1032590:intron |
| CCTATCGTTTAAATTTCTCT+GGG | 0.498158 | 7_1:+67551147 | Msa1032590:CDS |
| CCTCCCTTTCTCTCCTCAGT+CGG | 0.499106 | 7_1:-67555016 | None:intergenic |
| AGGAAAGGATAGATCTGATC+GGG | 0.499212 | 7_1:+67551114 | Msa1032590:CDS |
| TTGCCACCAAACTTGAACTC+TGG | 0.499698 | 7_1:+67551755 | Msa1032590:CDS |
| TGGTGGCCGGCGAACAACTC+CGG | 0.499736 | 7_1:-67550418 | None:intergenic |
| AACTTGGGAATGTATTTCCC+TGG | 0.500813 | 7_1:-67555647 | None:intergenic |
| ATTTGTTAAGATAAGCCAAA+TGG | 0.504304 | 7_1:-67551648 | None:intergenic |
| CTGCCAGAGTTCAAGTTTGG+TGG | 0.508059 | 7_1:-67551758 | None:intergenic |
| GACTCCAATGGACGACGGGC+AGG | 0.508726 | 7_1:-67555587 | None:intergenic |
| GCTCCTCCTCGTCGGAACTT+GGG | 0.514574 | 7_1:-67555662 | None:intergenic |
| AGGAATCCAGGAAACAGGAG+AGG | 0.522209 | 7_1:+67555036 | Msa1032590:CDS |
| CTTTCAGGAGCAGAAAGATC+AGG | 0.522693 | 7_1:-67551691 | None:intergenic |
| AACTCACCGGAGTTGTTCGC+CGG | 0.523099 | 7_1:+67550412 | Msa1032590:five_prime_UTR |
| TGATATGCCGCTTCGATAAG+CGG | 0.524970 | 7_1:-67554553 | None:intergenic |
| AGCAGACTCCAATGGACGAC+GGG | 0.526295 | 7_1:-67555591 | None:intergenic |
| TTTAGAACTAGAGCATGAAA+AGG | 0.528665 | 7_1:+67552134 | Msa1032590:CDS |
| TAGTAAGCCGTCATCAAAGA+TGG | 0.530774 | 7_1:-67551934 | None:intergenic |
| AACCCAACGAACCAGCTTTG+AGG | 0.530816 | 7_1:+67555552 | Msa1032590:CDS |
| ATGAAAAGGAGCGAAATTTG+AGG | 0.531777 | 7_1:+67552148 | Msa1032590:CDS |
| GTTGAAGTATTATCTTCGGT+TGG | 0.532254 | 7_1:+67555073 | Msa1032590:CDS |
| AGTGAATGTTTGTTCTTTGG+AGG | 0.533682 | 7_1:+67550940 | Msa1032590:CDS |
| GCCTGAGAATGCTCTCAAAA+GGG | 0.539859 | 7_1:+67550647 | Msa1032590:CDS |
| AAAAGCATGTAGTCAGGCTC+GGG | 0.541288 | 7_1:+67551006 | Msa1032590:CDS |
| TCTTGAAAAGCCTCTTGAAA+CGG | 0.542395 | 7_1:+67554198 | Msa1032590:CDS |
| AGGCCTCAAAGCTGGTTCGT+TGG | 0.543729 | 7_1:-67555555 | None:intergenic |
| TGGTTTCTATCAGAGTCTTG+AGG | 0.545464 | 7_1:+67553973 | Msa1032590:intron |
| CTTCGAAAAGATACCGATCA+TGG | 0.545492 | 7_1:+67550807 | Msa1032590:CDS |
| TGAATTTGACTAACCAACTC+AGG | 0.546210 | 7_1:+67554446 | Msa1032590:CDS |
| AAGGACAGTTTGCAAAGGAT+GGG | 0.547433 | 7_1:+67550888 | Msa1032590:CDS |
| GATAGGAAACAATCAAAACT+TGG | 0.547729 | 7_1:+67554070 | Msa1032590:CDS |
| TACTTTAAGTGCAAAGTCTG+AGG | 0.549443 | 7_1:-67553145 | None:intergenic |
| GAAAATCAATTATTGAGAAG+AGG | 0.554721 | 7_1:+67554152 | Msa1032590:CDS |
| AACCAGTATACCGTTTCAAG+AGG | 0.557814 | 7_1:-67554208 | None:intergenic |
| ACTGAAACCATCTTTGATGA+CGG | 0.557917 | 7_1:+67551927 | Msa1032590:CDS |
| TAAAAGCTGCCTTTGTTCCG+CGG | 0.558200 | 7_1:-67554326 | None:intergenic |
| AATGTATTTCCCTGGAGCTG+GGG | 0.559727 | 7_1:-67555639 | None:intergenic |
| TCCAATGGACGACGGGCAGG+AGG | 0.562752 | 7_1:-67555584 | None:intergenic |
| TAGCACATCAACAAGTCCTC+TGG | 0.564274 | 7_1:-67551076 | None:intergenic |
| AATAAAATTTCAAAATTAGG+GGG | 0.566405 | 7_1:+67553180 | Msa1032590:CDS |
| CCACAACCTCTAACAAAGAT+GGG | 0.569465 | 7_1:-67554102 | None:intergenic |
| ATTTATATCATGCATATGCA+TGG | 0.570202 | 7_1:+67551995 | Msa1032590:CDS |
| AGATCTGTTGAAGATATACA+TGG | 0.573495 | 7_1:+67551880 | Msa1032590:CDS |
| CTTCCTCAGCCCCAGCTCCA+GGG | 0.573704 | 7_1:+67555630 | Msa1032590:CDS |
| GCAGCAAGAGGCTGAACGGA+AGG | 0.577552 | 7_1:+67554783 | Msa1032590:intron |
| GAGTTTCTTACTGTTTCTGG+TGG | 0.578883 | 7_1:-67550435 | None:intergenic |
| TGATGGCTTAAGGGATCACT+TGG | 0.580040 | 7_1:+67553997 | Msa1032590:CDS |
| TTTGATTGTTTCCTATCAGG+AGG | 0.581585 | 7_1:-67554064 | None:intergenic |
| TGGTTTAAGCTCCTCCTCGT+CGG | 0.583485 | 7_1:-67555670 | None:intergenic |
| CTGAACAGTTGAATAAGGCA+AGG | 0.583947 | 7_1:+67554029 | Msa1032590:CDS |
| AAATAAAATTTCAAAATTAG+GGG | 0.584185 | 7_1:+67553179 | Msa1032590:CDS |
| TGATGTTTGAAAGGAACAAG+AGG | 0.584337 | 7_1:+67554288 | Msa1032590:intron |
| CTCTAAGTCATCAACATCGA+GGG | 0.588680 | 7_1:-67551041 | None:intergenic |
| TAACCGACTGAGGAGAGAAA+GGG | 0.588724 | 7_1:+67555013 | Msa1032590:CDS |
| TGCTATGTCAGTGAGGGGAA+AGG | 0.590991 | 7_1:+67551094 | Msa1032590:CDS |
| GGAGCGGCTTAGTCATAGGA+TGG | 0.592641 | 7_1:+67554804 | Msa1032590:CDS |
| GCAGCAGGAGCAGACTCCAA+TGG | 0.596770 | 7_1:-67555599 | None:intergenic |
| ACTTTAAGTGCAAAGTCTGA+GGG | 0.597810 | 7_1:-67553144 | None:intergenic |
| ATGAGCAGAGGATTAATCAA+AGG | 0.599357 | 7_1:+67554362 | Msa1032590:CDS |
| AAGAGGCTGAACGGAAGGAG+CGG | 0.601194 | 7_1:+67554788 | Msa1032590:CDS |
| CAATAAAGATCTGAGTCAGA+AGG | 0.601515 | 7_1:+67552047 | Msa1032590:CDS |
| AAGGAAAGGATAGATCTGAT+CGG | 0.604202 | 7_1:+67551113 | Msa1032590:CDS |
| AAAGGCTGAGAAGCAAAAGA+GGG | 0.605646 | 7_1:+67555514 | Msa1032590:CDS |
| TATACATGGCCTAATGTGCA+TGG | 0.608093 | 7_1:+67551894 | Msa1032590:CDS |
| GGAATCCAGGAAACAGGAGA+GGG | 0.608341 | 7_1:+67555037 | Msa1032590:CDS |
| TGATGCAGCAAGAGGCTGAA+CGG | 0.608489 | 7_1:+67554779 | Msa1032590:intron |
| TAATGTGTACCAGACAATGA+AGG | 0.610494 | 7_1:+67553397 | Msa1032590:CDS |
| GTTTGCTTCATCGGTTCCAG+AGG | 0.612314 | 7_1:+67553212 | Msa1032590:CDS |
| CACCTGTTGTAGCAACCTCA+GGG | 0.614215 | 7_1:-67553277 | None:intergenic |
| TGTTTGAAAGGAACAAGAGG+AGG | 0.615138 | 7_1:+67554291 | Msa1032590:intron |
| GGATAGTGCTTGAAATATTG+CGG | 0.617202 | 7_1:+67551179 | Msa1032590:CDS |
| TGAATGAGGAGGAAGAAGCT+CGG | 0.617520 | 7_1:+67555117 | Msa1032590:CDS |
| AATCTAGTATCAAGATACAA+TGG | 0.618117 | 7_1:-67551718 | None:intergenic |
| GAAGAATCCTCTCTTCCACT+AGG | 0.618520 | 7_1:-67554582 | None:intergenic |
| TAGATGAGGAAGAGCTCATG+TGG | 0.620693 | 7_1:-67555690 | None:intergenic |
| GAAGAAGCTCGGAAGCATGA+AGG | 0.620720 | 7_1:+67555128 | Msa1032590:CDS |
| TCTAACAAAGATGGGAGCAA+AGG | 0.620872 | 7_1:-67554094 | None:intergenic |
| TGAAGGTTGAGAACTTAGCT+GGG | 0.621260 | 7_1:+67553414 | Msa1032590:CDS |
| AGCTGAAAGACGTAGACATG+AGG | 0.621599 | 7_1:+67554420 | Msa1032590:CDS |
| GGAGGAATCAAAAGAAGCCG+CGG | 0.627667 | 7_1:+67554309 | Msa1032590:CDS |
| CTGAGATACTTGAAAAGCAG+AGG | 0.630519 | 7_1:+67555468 | Msa1032590:CDS |
| GAGCAGACTCCAATGGACGA+CGG | 0.633943 | 7_1:-67555592 | None:intergenic |
| AGATATTATTTAACCGACTG+AGG | 0.634671 | 7_1:+67555003 | Msa1032590:CDS |
| AGTTCTAAATTACAATCATG+AGG | 0.634819 | 7_1:-67552120 | None:intergenic |
| GTCTGCTCCGCTTATCGAAG+CGG | 0.637953 | 7_1:+67554546 | Msa1032590:CDS |
| TTGATGTGCTATGTCAGTGA+GGG | 0.639041 | 7_1:+67551088 | Msa1032590:CDS |
| TAAGATGAATAGCGGCAAAG+TGG | 0.639577 | 7_1:+67552203 | Msa1032590:CDS |
| GCGGAAAGGACAGTTTGCAA+AGG | 0.642079 | 7_1:+67550883 | Msa1032590:CDS |
| TGTCAGTGAGGGGAAAGGAA+AGG | 0.642611 | 7_1:+67551099 | Msa1032590:CDS |
| AACAGCGCCTAGTGGAAGAG+AGG | 0.644173 | 7_1:+67554575 | Msa1032590:CDS |
| TGAACAGTTGAATAAGGCAA+GGG | 0.644378 | 7_1:+67554030 | Msa1032590:CDS |
| TTGTGTGTAGACTTGCGGAA+AGG | 0.649903 | 7_1:+67550869 | Msa1032590:CDS |
| AAAGGAGCGAAATTTGAGGA+TGG | 0.656185 | 7_1:+67552152 | Msa1032590:CDS |
| ATTCCCAAGTTCCGACGAGG+AGG | 0.656196 | 7_1:+67555659 | Msa1032590:CDS |
| CCGACTGAGGAGAGAAAGGG+AGG | 0.658903 | 7_1:+67555016 | Msa1032590:CDS |
| GGCATATCAACAGCGCCTAG+TGG | 0.663162 | 7_1:+67554567 | Msa1032590:CDS |
| CGATGTTGATGACTTAGAGG+CGG | 0.666640 | 7_1:+67551045 | Msa1032590:CDS |
| TAGAGTTGTGTGTAGACTTG+CGG | 0.671483 | 7_1:+67550864 | Msa1032590:CDS |
| TCTAAATTACAATCATGAGG+AGG | 0.675689 | 7_1:-67552117 | None:intergenic |
| CCTCTAAGTCATCAACATCG+AGG | 0.682770 | 7_1:-67551042 | None:intergenic |
| TTGTGTTGCACAAGACGTGA+AGG | 0.689912 | 7_1:+67553089 | Msa1032590:CDS |
| TACATTCCCAAGTTCCGACG+AGG | 0.691051 | 7_1:+67555656 | Msa1032590:CDS |
| CAGGAGCAGAAAGATCAGGT+CGG | 0.694773 | 7_1:-67551687 | None:intergenic |
| CAGTATATAATAATGAGCAG+AGG | 0.697053 | 7_1:+67554350 | Msa1032590:CDS |
| GTTGATGTGCTATGTCAGTG+AGG | 0.699792 | 7_1:+67551087 | Msa1032590:CDS |
| AGAGGCGGATAAAAGGCCAG+AGG | 0.738928 | 7_1:+67551060 | Msa1032590:CDS |
| TGATGTGCTATGTCAGTGAG+GGG | 0.753887 | 7_1:+67551089 | Msa1032590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAAATAAAATTTCAAAATT+AGG | + | chr7_1:67553177-67553196 | Msa1032590:CDS | 10.0% |
| !! | AAATAAAATTTCAAAATTAG+GGG | + | chr7_1:67553179-67553198 | Msa1032590:CDS | 10.0% |
| !!! | ACATTTTATATATACATAAC+AGG | - | chr7_1:67551363-67551382 | None:intergenic | 15.0% |
| !!! | TTGCAAAAAAATGATATTTT+AGG | + | chr7_1:67551490-67551509 | Msa1032590:intron | 15.0% |
| !!! | TTTCTTTTTAATATTTAGTG+TGG | + | chr7_1:67552542-67552561 | Msa1032590:intron | 15.0% |
| !!! | TTTGAAATTTTATTTAGCAA+GGG | - | chr7_1:67553174-67553193 | None:intergenic | 15.0% |
| !!! | TTTTGAAATTTTATTTAGCA+AGG | - | chr7_1:67553175-67553194 | None:intergenic | 15.0% |
| !! | AATAAAATTTCAAAATTAGG+GGG | + | chr7_1:67553180-67553199 | Msa1032590:CDS | 15.0% |
| !!! | TATAAAACTAAAATGGATTT+TGG | - | chr7_1:67555809-67555828 | None:intergenic | 15.0% |
| !! | TTGATTGTATAAAACTAAAA+TGG | - | chr7_1:67555816-67555835 | None:intergenic | 15.0% |
| !!! | TGATTTAGATTTTAATTTTG+TGG | + | chr7_1:67555850-67555869 | Msa1032590:three_prime_UTR | 15.0% |
| !! | ATAAACTACATAAATATCTT+AGG | - | chr7_1:67555885-67555904 | None:intergenic | 15.0% |
| !! | AATTAAAGAAAAGAAAAACC+AGG | - | chr7_1:67550464-67550483 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCTTTAATTCCT+TGG | + | chr7_1:67550467-67550486 | Msa1032590:intron | 20.0% |
| !! | ACAAAATTGTCAAGAAAAAA+CGG | - | chr7_1:67550520-67550539 | None:intergenic | 20.0% |
| !! | AATATAGTGAATTCACAATA+TGG | + | chr7_1:67550611-67550630 | Msa1032590:exon | 20.0% |
| !!! | GTGTTTTAAACATTTAATAG+AGG | + | chr7_1:67551384-67551403 | Msa1032590:intron | 20.0% |
| !! | GCAATTAATTTCTATTTATC+AGG | - | chr7_1:67551421-67551440 | None:intergenic | 20.0% |
| !! | AAAGAAAAACAGAATTTAGA+AGG | + | chr7_1:67551605-67551624 | Msa1032590:CDS | 20.0% |
| !!! | TTAAGTTGATCGAAATATTT+TGG | + | chr7_1:67551959-67551978 | Msa1032590:CDS | 20.0% |
| !! | CTTAAAAATAAGATGAATAG+CGG | + | chr7_1:67552195-67552214 | Msa1032590:CDS | 20.0% |
| !! | AACAAATATCTATATACTAC+CGG | - | chr7_1:67552255-67552274 | None:intergenic | 20.0% |
| !! | ATTACAATGACAGTATAAAA+GGG | - | chr7_1:67552398-67552417 | None:intergenic | 20.0% |
| !! | AATTACAATGACAGTATAAA+AGG | - | chr7_1:67552399-67552418 | None:intergenic | 20.0% |
| !!! | TTTTTAATATTTAGTGTGGT+TGG | + | chr7_1:67552546-67552565 | Msa1032590:intron | 20.0% |
| !! | TGACATCAAAAGAATTAAAA+CGG | - | chr7_1:67552892-67552911 | None:intergenic | 20.0% |
| !! | TTTATGTTTGGATTAATTTC+AGG | + | chr7_1:67553047-67553066 | Msa1032590:intron | 20.0% |
| !! | CACAAACATAAAAACAAAAA+AGG | - | chr7_1:67553308-67553327 | None:intergenic | 20.0% |
| !!! | AAATTACAACTTTTTTCATG+TGG | - | chr7_1:67553523-67553542 | None:intergenic | 20.0% |
| !! | TTATGTAAAGAACATATTCT+AGG | - | chr7_1:67553836-67553855 | None:intergenic | 20.0% |
| !!! | TATACTGGTTATTTTTCATA+TGG | + | chr7_1:67554221-67554240 | Msa1032590:intron | 20.0% |
| !!! | TTATTTTTCATATGGTACAT+TGG | + | chr7_1:67554229-67554248 | Msa1032590:intron | 20.0% |
| !!! | TATTTTTCATATGGTACATT+GGG | + | chr7_1:67554230-67554249 | Msa1032590:intron | 20.0% |
| !! | GAAAAAATTAAGTAAAACCA+TGG | + | chr7_1:67554495-67554514 | Msa1032590:CDS | 20.0% |
| !! | TTGTAAAGAAAAAATAGATG+AGG | - | chr7_1:67555707-67555726 | None:intergenic | 20.0% |
| !!! | CTTGACAATTTTGTTGATTA+TGG | + | chr7_1:67550526-67550545 | Msa1032590:intron | 25.0% |
| !! | GGCTGAAATTTTATTGTTAT+TGG | + | chr7_1:67550547-67550566 | Msa1032590:intron | 25.0% |
| !!! | TGATTATCACTCTTTTTTAC+AGG | + | chr7_1:67550579-67550598 | Msa1032590:intron | 25.0% |
| ! | TATATACATAACAGGTAACT+TGG | - | chr7_1:67551355-67551374 | None:intergenic | 25.0% |
| ! | TTTAAACATTTAATAGAGGC+AGG | + | chr7_1:67551388-67551407 | Msa1032590:intron | 25.0% |
| ! | GCAATAAAACATACAACAAT+AGG | - | chr7_1:67551474-67551493 | None:intergenic | 25.0% |
| ! | TGAAATCTTAAGAAACCATT+TGG | + | chr7_1:67551633-67551652 | Msa1032590:CDS | 25.0% |
| !! | ATTTGTTAAGATAAGCCAAA+TGG | - | chr7_1:67551651-67551670 | None:intergenic | 25.0% |
| ! | AATCTAGTATCAAGATACAA+TGG | - | chr7_1:67551721-67551740 | None:intergenic | 25.0% |
| !! | CATTTTTCTTTACATCTTCA+AGG | + | chr7_1:67551794-67551813 | Msa1032590:intron | 25.0% |
| ! | ATTTATATCATGCATATGCA+TGG | + | chr7_1:67551995-67552014 | Msa1032590:CDS | 25.0% |
| !!! | AGTTCTAAATTACAATCATG+AGG | - | chr7_1:67552123-67552142 | None:intergenic | 25.0% |
| ! | ACAAATATCTATATACTACC+GGG | - | chr7_1:67552254-67552273 | None:intergenic | 25.0% |
| ! | TATCATGAAGTGTATTGTTA+TGG | + | chr7_1:67552424-67552443 | Msa1032590:intron | 25.0% |
| ! | ATACTAATGAAGGTAAATAG+TGG | - | chr7_1:67552691-67552710 | None:intergenic | 25.0% |
| ! | ACTATTTACCTTCATTAGTA+TGG | + | chr7_1:67552690-67552709 | Msa1032590:intron | 25.0% |
| ! | CGATATTTCATGTTATTAGA+TGG | + | chr7_1:67552717-67552736 | Msa1032590:intron | 25.0% |
| ! | TTCATGTTATTAGATGGAAA+AGG | + | chr7_1:67552723-67552742 | Msa1032590:intron | 25.0% |
| ! | GACATCAAAAGAATTAAAAC+GGG | - | chr7_1:67552891-67552910 | None:intergenic | 25.0% |
| !! | TTTAGAACCCATTATCTATA+AGG | + | chr7_1:67552953-67552972 | Msa1032590:intron | 25.0% |
| !!! | AGGTATGTTTTCCTTTATTT+TGG | + | chr7_1:67553552-67553571 | Msa1032590:intron | 25.0% |
| !! | ATGTTATTTGACGAATACAT+TGG | + | chr7_1:67553731-67553750 | Msa1032590:intron | 25.0% |
| !! | AACTCATTATTTTCCATGTT+GGG | - | chr7_1:67553792-67553811 | None:intergenic | 25.0% |
| !! | TAACTCATTATTTTCCATGT+TGG | - | chr7_1:67553793-67553812 | None:intergenic | 25.0% |
| ! | GAAAATCAATTATTGAGAAG+AGG | + | chr7_1:67554152-67554171 | Msa1032590:CDS | 25.0% |
| !!! | AAGTAAAACCATGGATTTTT+TGG | + | chr7_1:67554504-67554523 | Msa1032590:CDS | 25.0% |
| ! | AAGTTAGTATCATAAACTCT+TGG | + | chr7_1:67554833-67554852 | Msa1032590:intron | 25.0% |
| ! | AGTTAGTATCATAAACTCTT+GGG | + | chr7_1:67554834-67554853 | Msa1032590:intron | 25.0% |
| ! | TCTTAAATCATTCTATGTCT+TGG | + | chr7_1:67554861-67554880 | Msa1032590:intron | 25.0% |
| !! | AAAGAACATCGATTGTTAAA+AGG | - | chr7_1:67554906-67554925 | None:intergenic | 25.0% |
| ! | TCAATACTATATCATCTGAA+GGG | - | chr7_1:67555190-67555209 | None:intergenic | 25.0% |
| ! | TTCAATACTATATCATCTGA+AGG | - | chr7_1:67555191-67555210 | None:intergenic | 25.0% |
| !! | TTCAGATGATATAGTATTGA+AGG | + | chr7_1:67555190-67555209 | Msa1032590:intron | 25.0% |
| !! | TAACATAATCATGACTGTTT+TGG | - | chr7_1:67555260-67555279 | None:intergenic | 25.0% |
| ! | TTAAGAAGAATGAAATGCAA+AGG | - | chr7_1:67555294-67555313 | None:intergenic | 25.0% |
| ! | GTAAATACAAAATAGAGGAT+AGG | - | chr7_1:67555373-67555392 | None:intergenic | 25.0% |
| ! | GTTAGGTAAATACAAAATAG+AGG | - | chr7_1:67555378-67555397 | None:intergenic | 25.0% |
| !! | TTTTGTATTTACCTAACTTG+TGG | + | chr7_1:67555381-67555400 | Msa1032590:intron | 25.0% |
| ! | TAAGGAAAAAGATGATCAAA+TGG | - | chr7_1:67555748-67555767 | None:intergenic | 25.0% |
| AAAGAAAAGAAAAACCAGGA+CGG | - | chr7_1:67550460-67550479 | None:intergenic | 30.0% | |
| TATGCAGAGTTAATCAATGT+TGG | + | chr7_1:67550743-67550762 | Msa1032590:intron | 30.0% | |
| ATGCAGAGTTAATCAATGTT+GGG | + | chr7_1:67550744-67550763 | Msa1032590:intron | 30.0% | |
| CCAGAGAAATTTAAACGATA+GGG | - | chr7_1:67551149-67551168 | None:intergenic | 30.0% | |
| CCTATCGTTTAAATTTCTCT+GGG | + | chr7_1:67551147-67551166 | Msa1032590:CDS | 30.0% | |
| GCATACAACACATAATTATG+AGG | - | chr7_1:67551308-67551327 | None:intergenic | 30.0% | |
| AAACATACAACAATAGGCAA+TGG | - | chr7_1:67551468-67551487 | None:intergenic | 30.0% | |
| ! | TTTTGTACTGCTTACAAAAC+TGG | - | chr7_1:67551588-67551607 | None:intergenic | 30.0% |
| GGCTTATCTTAACAAATATC+CGG | + | chr7_1:67551654-67551673 | Msa1032590:CDS | 30.0% | |
| AGATCTGTTGAAGATATACA+TGG | + | chr7_1:67551880-67551899 | Msa1032590:CDS | 30.0% | |
| TCTAAATTACAATCATGAGG+AGG | - | chr7_1:67552120-67552139 | None:intergenic | 30.0% | |
| ! | TTTAGAACTAGAGCATGAAA+AGG | + | chr7_1:67552134-67552153 | Msa1032590:CDS | 30.0% |
| CAAAAGCAAATAGTAAGACT+TGG | - | chr7_1:67552280-67552299 | None:intergenic | 30.0% | |
| ! | GAGATAGTATATATTTGCTG+TGG | + | chr7_1:67552754-67552773 | Msa1032590:intron | 30.0% |
| GCTTACAATTAATGGCAAAA+AGG | - | chr7_1:67552922-67552941 | None:intergenic | 30.0% | |
| TACAGATGGCTTACAATTAA+TGG | - | chr7_1:67552930-67552949 | None:intergenic | 30.0% | |
| TCGTAATAATACTAACCCAA+AGG | - | chr7_1:67552996-67553015 | None:intergenic | 30.0% | |
| GATTAATTTCAGGCATCAAA+GGG | + | chr7_1:67553057-67553076 | Msa1032590:intron | 30.0% | |
| ! | GAAGGACATTTACTATCTTT+TGG | + | chr7_1:67553107-67553126 | Msa1032590:CDS | 30.0% |
| !! | GAAATTTTATTTAGCAAGGG+TGG | - | chr7_1:67553171-67553190 | None:intergenic | 30.0% |
| ! | TAAGTTTTCGTTTGCTTCAT+CGG | + | chr7_1:67553203-67553222 | Msa1032590:CDS | 30.0% |
| !!! | TAGCTAACTTTTTAAGTGCT+GGG | - | chr7_1:67553257-67553276 | None:intergenic | 30.0% |
| !!! | TACAGAGATTTTTTCCACAA+CGG | - | chr7_1:67553462-67553481 | None:intergenic | 30.0% |
| ! | AGTTGTAATTTTCTGCAAGA+AGG | + | chr7_1:67553532-67553551 | Msa1032590:CDS | 30.0% |
| ACGCAATAGAACCAAAATAA+AGG | - | chr7_1:67553566-67553585 | None:intergenic | 30.0% | |
| GTTTGAAGAGAATACTAGAT+AGG | + | chr7_1:67553624-67553643 | Msa1032590:intron | 30.0% | |
| ATAATAACAATCGAGAGAGT+TGG | + | chr7_1:67553654-67553673 | Msa1032590:intron | 30.0% | |
| TAATAACAATCGAGAGAGTT+GGG | + | chr7_1:67553655-67553674 | Msa1032590:intron | 30.0% | |
| ! | AGATGGTTAATTCCCAATTT+TGG | + | chr7_1:67553699-67553718 | Msa1032590:intron | 30.0% |
| CATGTAAAACCACCAAAATT+GGG | - | chr7_1:67553714-67553733 | None:intergenic | 30.0% | |
| ACATGTAAAACCACCAAAAT+TGG | - | chr7_1:67553715-67553734 | None:intergenic | 30.0% | |
| GAACATATTCTAGGTGATAA+TGG | - | chr7_1:67553827-67553846 | None:intergenic | 30.0% | |
| CAAGAAAATGCCATAACATT+TGG | - | chr7_1:67553955-67553974 | None:intergenic | 30.0% | |
| ! | CAAATGTTATGGCATTTTCT+TGG | + | chr7_1:67553953-67553972 | Msa1032590:intron | 30.0% |
| !!! | AGTTTTGATTGTTTCCTATC+AGG | - | chr7_1:67554070-67554089 | None:intergenic | 30.0% |
| GATAGGAAACAATCAAAACT+TGG | + | chr7_1:67554070-67554089 | Msa1032590:CDS | 30.0% | |
| !! | CAATAATTGATTTTCGAGCA+AGG | - | chr7_1:67554147-67554166 | None:intergenic | 30.0% |
| ! | CTTTCCTTTTGATGTTTGAA+AGG | + | chr7_1:67554279-67554298 | Msa1032590:intron | 30.0% |
| TGTTCCTTTCAAACATCAAA+AGG | - | chr7_1:67554286-67554305 | None:intergenic | 30.0% | |
| CAGTATATAATAATGAGCAG+AGG | + | chr7_1:67554350-67554369 | Msa1032590:CDS | 30.0% | |
| ATGATAGAAAACATCAGACT+AGG | - | chr7_1:67554966-67554985 | None:intergenic | 30.0% | |
| AGATATTATTTAACCGACTG+AGG | + | chr7_1:67555003-67555022 | Msa1032590:CDS | 30.0% | |
| ! | GGAAGTTGAAGTATTATCTT+CGG | + | chr7_1:67555069-67555088 | Msa1032590:CDS | 30.0% |
| GAGACAACAAAAATTGAATG+AGG | + | chr7_1:67555103-67555122 | Msa1032590:CDS | 30.0% | |
| ACAACAAAAATTGAATGAGG+AGG | + | chr7_1:67555106-67555125 | Msa1032590:CDS | 30.0% | |
| ACTGGATTGTATGTAAAAGA+TGG | - | chr7_1:67555348-67555367 | None:intergenic | 30.0% | |
| AGAAAGAGAAGTTGAAGAAA+AGG | + | chr7_1:67555496-67555515 | Msa1032590:CDS | 30.0% | |
| TGAAATCGTAACTGTAACCA+AGG | - | chr7_1:67550487-67550506 | None:intergenic | 35.0% | |
| GCAAGTGAATGTTTGTTCTT+TGG | + | chr7_1:67550937-67550956 | Msa1032590:CDS | 35.0% | |
| AGTGAATGTTTGTTCTTTGG+AGG | + | chr7_1:67550940-67550959 | Msa1032590:CDS | 35.0% | |
| AAGGAAAGGATAGATCTGAT+CGG | + | chr7_1:67551113-67551132 | Msa1032590:CDS | 35.0% | |
| CCCTATCGTTTAAATTTCTC+TGG | + | chr7_1:67551146-67551165 | Msa1032590:CDS | 35.0% | |
| CCCAGAGAAATTTAAACGAT+AGG | - | chr7_1:67551150-67551169 | None:intergenic | 35.0% | |
| ! | AATTTCTCTGGGAAACTTAC+AGG | + | chr7_1:67551158-67551177 | Msa1032590:CDS | 35.0% |
| GGATAGTGCTTGAAATATTG+CGG | + | chr7_1:67551179-67551198 | Msa1032590:CDS | 35.0% | |
| !!! | GGTGTTTGTTTTATTGATGC+TGG | + | chr7_1:67551815-67551834 | Msa1032590:intron | 35.0% |
| !!! | GTTTGTTTTATTGATGCTGG+TGG | + | chr7_1:67551818-67551837 | Msa1032590:intron | 35.0% |
| ! | TTTTCTTGACCATGCACATT+AGG | - | chr7_1:67551906-67551925 | None:intergenic | 35.0% |
| ACTGAAACCATCTTTGATGA+CGG | + | chr7_1:67551927-67551946 | Msa1032590:CDS | 35.0% | |
| CAATAAAGATCTGAGTCAGA+AGG | + | chr7_1:67552047-67552066 | Msa1032590:CDS | 35.0% | |
| ATGAAAAGGAGCGAAATTTG+AGG | + | chr7_1:67552148-67552167 | Msa1032590:CDS | 35.0% | |
| TGAAGTGTATTGTTATGGAG+TGG | + | chr7_1:67552429-67552448 | Msa1032590:intron | 35.0% | |
| GAAGTGTATTGTTATGGAGT+GGG | + | chr7_1:67552430-67552449 | Msa1032590:intron | 35.0% | |
| CTTCCACTCTTTCTTAATTG+TGG | + | chr7_1:67552485-67552504 | Msa1032590:intron | 35.0% | |
| AGTCCACAATTAAGAAAGAG+TGG | - | chr7_1:67552491-67552510 | None:intergenic | 35.0% | |
| !! | AAGTTGGCAATAAGTTGATG+AGG | - | chr7_1:67552594-67552613 | None:intergenic | 35.0% |
| AGCTGTTAAAGGTTGTAAGT+TGG | - | chr7_1:67552610-67552629 | None:intergenic | 35.0% | |
| GCAAGATCAAAAGCTGTTAA+AGG | - | chr7_1:67552621-67552640 | None:intergenic | 35.0% | |
| ! | TGATCTTGCATTTTGCATTC+TGG | + | chr7_1:67552632-67552651 | Msa1032590:intron | 35.0% |
| !! | GGTTGTGAATATTTGTTGTG+CGG | + | chr7_1:67552653-67552672 | Msa1032590:intron | 35.0% |
| ATCGACAACCATACTAATGA+AGG | - | chr7_1:67552701-67552720 | None:intergenic | 35.0% | |
| !! | TGGGTTCTAAACAATACAGA+TGG | - | chr7_1:67552944-67552963 | None:intergenic | 35.0% |
| ACCCATTATCTATAAGGTTC+AGG | + | chr7_1:67552959-67552978 | Msa1032590:intron | 35.0% | |
| CCCTGAACCTTATAGATAAT+GGG | - | chr7_1:67552963-67552982 | None:intergenic | 35.0% | |
| CCCATTATCTATAAGGTTCA+GGG | + | chr7_1:67552960-67552979 | Msa1032590:intron | 35.0% | |
| CCATTATCTATAAGGTTCAG+GGG | + | chr7_1:67552961-67552980 | Msa1032590:intron | 35.0% | |
| CATTATCTATAAGGTTCAGG+GGG | + | chr7_1:67552962-67552981 | Msa1032590:intron | 35.0% | |
| ! | CGGTCTGAAGATTTTATGTT+TGG | + | chr7_1:67553035-67553054 | Msa1032590:intron | 35.0% |
| GGATTAATTTCAGGCATCAA+AGG | + | chr7_1:67553056-67553075 | Msa1032590:intron | 35.0% | |
| ACTTTAAGTGCAAAGTCTGA+GGG | - | chr7_1:67553147-67553166 | None:intergenic | 35.0% | |
| TACTTTAAGTGCAAAGTCTG+AGG | - | chr7_1:67553148-67553167 | None:intergenic | 35.0% | |
| !!! | GTAGCTAACTTTTTAAGTGC+TGG | - | chr7_1:67553258-67553277 | None:intergenic | 35.0% |
| TTAAAAAGTTAGCTACCCTG+AGG | + | chr7_1:67553262-67553281 | Msa1032590:CDS | 35.0% | |
| TAATGTGTACCAGACAATGA+AGG | + | chr7_1:67553397-67553416 | Msa1032590:CDS | 35.0% | |
| ACAACGGAAAAATCAGCAAA+AGG | - | chr7_1:67553446-67553465 | None:intergenic | 35.0% | |
| !!! | TTTTGCTGATTTTTCCGTTG+TGG | + | chr7_1:67553445-67553464 | Msa1032590:CDS | 35.0% |
| AATAACAATCGAGAGAGTTG+GGG | + | chr7_1:67553656-67553675 | Msa1032590:intron | 35.0% | |
| ! | TGGTTAATTCCCAATTTTGG+TGG | + | chr7_1:67553702-67553721 | Msa1032590:intron | 35.0% |
| !! | CATTGGTTTGTTGTCAATCT+TGG | + | chr7_1:67553748-67553767 | Msa1032590:intron | 35.0% |
| CAGAATCATTATTCCCAACA+TGG | + | chr7_1:67553776-67553795 | Msa1032590:intron | 35.0% | |
| ! | CTTTACATAAGCACTTGTTG+TGG | + | chr7_1:67553846-67553865 | Msa1032590:intron | 35.0% |
| !! | ATAAGCACTTGTTGTGGTTT+AGG | + | chr7_1:67553852-67553871 | Msa1032590:intron | 35.0% |
| CCATAACATTTGGTAAGATG+AGG | - | chr7_1:67553945-67553964 | None:intergenic | 35.0% | |
| CCTCATCTTACCAAATGTTA+TGG | + | chr7_1:67553942-67553961 | Msa1032590:intron | 35.0% | |
| TTCTGCTGAACAGTTGAATA+AGG | + | chr7_1:67554024-67554043 | Msa1032590:CDS | 35.0% | |
| TGAACAGTTGAATAAGGCAA+GGG | + | chr7_1:67554030-67554049 | Msa1032590:CDS | 35.0% | |
| AAATGATATCTCCTCCTGAT+AGG | + | chr7_1:67554053-67554072 | Msa1032590:CDS | 35.0% | |
| TTTGATTGTTTCCTATCAGG+AGG | - | chr7_1:67554067-67554086 | None:intergenic | 35.0% | |
| AAGGAGAATCTTGTGATCTT+TGG | - | chr7_1:67554128-67554147 | None:intergenic | 35.0% | |
| TCTTGAAAAGCCTCTTGAAA+CGG | + | chr7_1:67554198-67554217 | Msa1032590:CDS | 35.0% | |
| TGATGTTTGAAAGGAACAAG+AGG | + | chr7_1:67554288-67554307 | Msa1032590:intron | 35.0% | |
| ATGAGCAGAGGATTAATCAA+AGG | + | chr7_1:67554362-67554381 | Msa1032590:CDS | 35.0% | |
| TGAATTTGACTAACCAACTC+AGG | + | chr7_1:67554446-67554465 | Msa1032590:CDS | 35.0% | |
| TGCTCTTTCCAAAAAATCCA+TGG | - | chr7_1:67554515-67554534 | None:intergenic | 35.0% | |
| AGTATGTCTACTTGTGATGT+TGG | + | chr7_1:67554621-67554640 | Msa1032590:intron | 35.0% | |
| ! | GTCTGATGTTTTCTATCATG+TGG | + | chr7_1:67554967-67554986 | Msa1032590:intron | 35.0% |
| ! | GTTGAAGTATTATCTTCGGT+TGG | + | chr7_1:67555073-67555092 | Msa1032590:CDS | 35.0% |
| ACTATATCATCTGAAGGGAA+AGG | - | chr7_1:67555185-67555204 | None:intergenic | 35.0% | |
| !! | CATAATCATGACTGTTTTGG+TGG | - | chr7_1:67555257-67555276 | None:intergenic | 35.0% |
| GAAGAATGAAATGCAAAGGA+TGG | - | chr7_1:67555290-67555309 | None:intergenic | 35.0% | |
| CAAAATAGAGGATAGGTTAC+TGG | - | chr7_1:67555366-67555385 | None:intergenic | 35.0% | |
| TCAGAAAGACTTAGAGTGTA+AGG | - | chr7_1:67555766-67555785 | None:intergenic | 35.0% | |
| !! | GAGTTTCTTACTGTTTCTGG+TGG | - | chr7_1:67550438-67550457 | None:intergenic | 40.0% |
| ACGGAGTTTCTTACTGTTTC+TGG | - | chr7_1:67550441-67550460 | None:intergenic | 40.0% | |
| AATGCTCTCAAAAGGGTAGA+AGG | + | chr7_1:67550654-67550673 | Msa1032590:CDS | 40.0% | |
| ! | AGGGTAGAAGGTTTGTTCAA+CGG | + | chr7_1:67550666-67550685 | Msa1032590:intron | 40.0% |
| CTTCGAAAAGATACCGATCA+TGG | + | chr7_1:67550807-67550826 | Msa1032590:CDS | 40.0% | |
| ! | CGTGTATTTTCTGCCATGAT+CGG | - | chr7_1:67550823-67550842 | None:intergenic | 40.0% |
| TAGAGTTGTGTGTAGACTTG+CGG | + | chr7_1:67550864-67550883 | Msa1032590:CDS | 40.0% | |
| AAAGGACAGTTTGCAAAGGA+TGG | + | chr7_1:67550887-67550906 | Msa1032590:CDS | 40.0% | |
| AAGGACAGTTTGCAAAGGAT+GGG | + | chr7_1:67550888-67550907 | Msa1032590:CDS | 40.0% | |
| ! | TGTTTGTTCTTTGGAGGATG+TGG | + | chr7_1:67550946-67550965 | Msa1032590:CDS | 40.0% |
| ! | GCTTTTCATTCACCTGTCAA+CGG | + | chr7_1:67550973-67550992 | Msa1032590:intron | 40.0% |
| ! | AGCTGAAAAAGCATGTAGTC+AGG | + | chr7_1:67551000-67551019 | Msa1032590:CDS | 40.0% |
| ! | AAAAAGCATGTAGTCAGGCT+CGG | + | chr7_1:67551005-67551024 | Msa1032590:CDS | 40.0% |
| CTCTAAGTCATCAACATCGA+GGG | - | chr7_1:67551044-67551063 | None:intergenic | 40.0% | |
| ATGACTTAGAGGCGGATAAA+AGG | + | chr7_1:67551053-67551072 | Msa1032590:CDS | 40.0% | |
| TTGATGTGCTATGTCAGTGA+GGG | + | chr7_1:67551088-67551107 | Msa1032590:CDS | 40.0% | |
| AGGAAAGGATAGATCTGATC+GGG | + | chr7_1:67551114-67551133 | Msa1032590:CDS | 40.0% | |
| AGATACAATGGCAAGCTTTC+AGG | - | chr7_1:67551709-67551728 | None:intergenic | 40.0% | |
| CATGCATGCAAAAAATCGTC+AGG | - | chr7_1:67551848-67551867 | None:intergenic | 40.0% | |
| !!! | ACGATTTTTTGCATGCATGC+AGG | + | chr7_1:67551849-67551868 | Msa1032590:intron | 40.0% |
| TATACATGGCCTAATGTGCA+TGG | + | chr7_1:67551894-67551913 | Msa1032590:CDS | 40.0% | |
| TAGTAAGCCGTCATCAAAGA+TGG | - | chr7_1:67551937-67551956 | None:intergenic | 40.0% | |
| AGATCTGAGTCAGAAGGATT+TGG | + | chr7_1:67552053-67552072 | Msa1032590:CDS | 40.0% | |
| AAAGGAGCGAAATTTGAGGA+TGG | + | chr7_1:67552152-67552171 | Msa1032590:CDS | 40.0% | |
| TTGAGGATGGCTAATCTCAT+TGG | + | chr7_1:67552165-67552184 | Msa1032590:CDS | 40.0% | |
| TAAGATGAATAGCGGCAAAG+TGG | + | chr7_1:67552203-67552222 | Msa1032590:CDS | 40.0% | |
| CCCCTGAACCTTATAGATAA+TGG | - | chr7_1:67552964-67552983 | None:intergenic | 40.0% | |
| ATCGACAATTGCTTTCGACT+CGG | + | chr7_1:67553015-67553034 | Msa1032590:intron | 40.0% | |
| TGACGTGTACTTAAACCTGT+TGG | + | chr7_1:67553354-67553373 | Msa1032590:intron | 40.0% | |
| CACATTAGAGACCTAGAAGA+GGG | - | chr7_1:67553384-67553403 | None:intergenic | 40.0% | |
| ACACATTAGAGACCTAGAAG+AGG | - | chr7_1:67553385-67553404 | None:intergenic | 40.0% | |
| AGTTCTCAACCTTCATTGTC+TGG | - | chr7_1:67553409-67553428 | None:intergenic | 40.0% | |
| ATGAAGGTTGAGAACTTAGC+TGG | + | chr7_1:67553413-67553432 | Msa1032590:CDS | 40.0% | |
| TGAAGGTTGAGAACTTAGCT+GGG | + | chr7_1:67553414-67553433 | Msa1032590:CDS | 40.0% | |
| TTAACCATCTCCCCTACAAT+AGG | - | chr7_1:67553689-67553708 | None:intergenic | 40.0% | |
| TGGTTTCTATCAGAGTCTTG+AGG | + | chr7_1:67553973-67553992 | Msa1032590:intron | 40.0% | |
| ATTCAACTGTTCAGCAGAAC+TGG | - | chr7_1:67554023-67554042 | None:intergenic | 40.0% | |
| CTGAACAGTTGAATAAGGCA+AGG | + | chr7_1:67554029-67554048 | Msa1032590:CDS | 40.0% | |
| TCTAACAAAGATGGGAGCAA+AGG | - | chr7_1:67554097-67554116 | None:intergenic | 40.0% | |
| TTTGCTCCCATCTTTGTTAG+AGG | + | chr7_1:67554096-67554115 | Msa1032590:CDS | 40.0% | |
| CCACAACCTCTAACAAAGAT+GGG | - | chr7_1:67554105-67554124 | None:intergenic | 40.0% | |
| !! | GTTTCAAGAGGCTTTTCAAG+AGG | - | chr7_1:67554199-67554218 | None:intergenic | 40.0% |
| AACCAGTATACCGTTTCAAG+AGG | - | chr7_1:67554211-67554230 | None:intergenic | 40.0% | |
| TGTTTGAAAGGAACAAGAGG+AGG | + | chr7_1:67554291-67554310 | Msa1032590:intron | 40.0% | |
| AGCTTCTTCGTGTTCTCTTT+CGG | - | chr7_1:67554404-67554423 | None:intergenic | 40.0% | |
| TTTCTTGTCTCATCCTGAGT+TGG | - | chr7_1:67554462-67554481 | None:intergenic | 40.0% | |
| ACTCAGGATGAGACAAGAAA+TGG | + | chr7_1:67554462-67554481 | Msa1032590:CDS | 40.0% | |
| GTACTAACTGTGTTAGACCA+TGG | + | chr7_1:67554754-67554773 | Msa1032590:intron | 40.0% | |
| AACAGGAGAGGGAAAAAATG+AGG | + | chr7_1:67555048-67555067 | Msa1032590:CDS | 40.0% | |
| ATTGAAGGACTACACTGAAC+TGG | + | chr7_1:67555205-67555224 | Msa1032590:intron | 40.0% | |
| AGAGGCTGAGAGAAAAAAGA+AGG | + | chr7_1:67555418-67555437 | Msa1032590:intron | 40.0% | |
| CTGAGATACTTGAAAAGCAG+AGG | + | chr7_1:67555468-67555487 | Msa1032590:CDS | 40.0% | |
| AAAAGGCTGAGAAGCAAAAG+AGG | + | chr7_1:67555513-67555532 | Msa1032590:CDS | 40.0% | |
| AAAGGCTGAGAAGCAAAAGA+GGG | + | chr7_1:67555514-67555533 | Msa1032590:CDS | 40.0% | |
| !! | CAAAAGAGGGAAGCATTGTT+AGG | + | chr7_1:67555527-67555546 | Msa1032590:CDS | 40.0% |
| AACTTGGGAATGTATTTCCC+TGG | - | chr7_1:67555650-67555669 | None:intergenic | 40.0% | |
| CTGAGACGTTCTTAGATTAC+AGG | + | chr7_1:67555782-67555801 | Msa1032590:three_prime_UTR | 40.0% | |
| !! | TTCTTACTGTTTCTGGTGGC+CGG | - | chr7_1:67550434-67550453 | None:intergenic | 45.0% |
| AACAGTAAGAAACTCCGTCC+TGG | + | chr7_1:67550443-67550462 | Msa1032590:intron | 45.0% | |
| AGCCTGAGAATGCTCTCAAA+AGG | + | chr7_1:67550646-67550665 | Msa1032590:CDS | 45.0% | |
| GCCTGAGAATGCTCTCAAAA+GGG | + | chr7_1:67550647-67550666 | Msa1032590:CDS | 45.0% | |
| !!! | ACCCTTTTGAGAGCATTCTC+AGG | - | chr7_1:67550651-67550670 | None:intergenic | 45.0% |
| TTGTGTGTAGACTTGCGGAA+AGG | + | chr7_1:67550869-67550888 | Msa1032590:CDS | 45.0% | |
| TTTCAGCTTTCTCCGTTGAC+AGG | - | chr7_1:67550988-67551007 | None:intergenic | 45.0% | |
| ! | AAAAGCATGTAGTCAGGCTC+GGG | + | chr7_1:67551006-67551025 | Msa1032590:CDS | 45.0% |
| CCTCTAAGTCATCAACATCG+AGG | - | chr7_1:67551045-67551064 | None:intergenic | 45.0% | |
| !! | CCTCGATGTTGATGACTTAG+AGG | + | chr7_1:67551042-67551061 | Msa1032590:CDS | 45.0% |
| !! | CGATGTTGATGACTTAGAGG+CGG | + | chr7_1:67551045-67551064 | Msa1032590:CDS | 45.0% |
| TAGCACATCAACAAGTCCTC+TGG | - | chr7_1:67551079-67551098 | None:intergenic | 45.0% | |
| GTTGATGTGCTATGTCAGTG+AGG | + | chr7_1:67551087-67551106 | Msa1032590:CDS | 45.0% | |
| TGATGTGCTATGTCAGTGAG+GGG | + | chr7_1:67551089-67551108 | Msa1032590:CDS | 45.0% | |
| CTTTCAGGAGCAGAAAGATC+AGG | - | chr7_1:67551694-67551713 | None:intergenic | 45.0% | |
| TTGCCACCAAACTTGAACTC+TGG | + | chr7_1:67551755-67551774 | Msa1032590:CDS | 45.0% | |
| ! | AACCTGCCAGAGTTCAAGTT+TGG | - | chr7_1:67551764-67551783 | None:intergenic | 45.0% |
| AAACTTGAACTCTGGCAGGT+TGG | + | chr7_1:67551763-67551782 | Msa1032590:intron | 45.0% | |
| GTCATCACTTCTTGCTGAAC+TGG | + | chr7_1:67552330-67552349 | Msa1032590:CDS | 45.0% | |
| ATCTATAAGGTTCAGGGGGT+TGG | + | chr7_1:67552966-67552985 | Msa1032590:intron | 45.0% | |
| TCTATAAGGTTCAGGGGGTT+GGG | + | chr7_1:67552967-67552986 | Msa1032590:intron | 45.0% | |
| TTGTGTTGCACAAGACGTGA+AGG | + | chr7_1:67553089-67553108 | Msa1032590:CDS | 45.0% | |
| TACTGCGACAATTGTACCTC+TGG | - | chr7_1:67553231-67553250 | None:intergenic | 45.0% | |
| TTAGAGACCTAGAAGAGGGA+GGG | - | chr7_1:67553380-67553399 | None:intergenic | 45.0% | |
| ATTAGAGACCTAGAAGAGGG+AGG | - | chr7_1:67553381-67553400 | None:intergenic | 45.0% | |
| !! | AGCACTTGTTGTGGTTTAGG+TGG | + | chr7_1:67553855-67553874 | Msa1032590:intron | 45.0% |
| !! | GCACTTGTTGTGGTTTAGGT+GGG | + | chr7_1:67553856-67553875 | Msa1032590:intron | 45.0% |
| !! | CACTTGTTGTGGTTTAGGTG+GGG | + | chr7_1:67553857-67553876 | Msa1032590:intron | 45.0% |
| GCTGTTTACAGTAGCTCTCA+AGG | + | chr7_1:67553890-67553909 | Msa1032590:intron | 45.0% | |
| ! | GTAAGATGAGGCAGAGTACT+AGG | - | chr7_1:67553933-67553952 | None:intergenic | 45.0% |
| TATCAGAGTCTTGAGGCTGA+TGG | + | chr7_1:67553980-67553999 | Msa1032590:intron | 45.0% | |
| TCTTGAGGCTGATGGCTTAA+GGG | + | chr7_1:67553988-67554007 | Msa1032590:CDS | 45.0% | |
| TGATGGCTTAAGGGATCACT+TGG | + | chr7_1:67553997-67554016 | Msa1032590:CDS | 45.0% | |
| CCCATCTTTGTTAGAGGTTG+TGG | + | chr7_1:67554102-67554121 | Msa1032590:CDS | 45.0% | |
| GCCACAACCTCTAACAAAGA+TGG | - | chr7_1:67554106-67554125 | None:intergenic | 45.0% | |
| AGCCTCTTGAAACGGTATAC+TGG | + | chr7_1:67554206-67554225 | Msa1032590:intron | 45.0% | |
| TAAAAGCTGCCTTTGTTCCG+CGG | - | chr7_1:67554329-67554348 | None:intergenic | 45.0% | |
| AGCTGAAAGACGTAGACATG+AGG | + | chr7_1:67554420-67554439 | Msa1032590:CDS | 45.0% | |
| ! | TGATATGCCGCTTCGATAAG+CGG | - | chr7_1:67554556-67554575 | None:intergenic | 45.0% |
| GAAGAATCCTCTCTTCCACT+AGG | - | chr7_1:67554585-67554604 | None:intergenic | 45.0% | |
| AAGGTCGTCATTACTGACGA+TGG | - | chr7_1:67554887-67554906 | None:intergenic | 45.0% | |
| TTAACCGACTGAGGAGAGAA+AGG | + | chr7_1:67555012-67555031 | Msa1032590:CDS | 45.0% | |
| TAACCGACTGAGGAGAGAAA+GGG | + | chr7_1:67555013-67555032 | Msa1032590:CDS | 45.0% | |
| ! | TTTTTCCCTCTCCTGTTTCC+TGG | - | chr7_1:67555045-67555064 | None:intergenic | 45.0% |
| TGAATGAGGAGGAAGAAGCT+CGG | + | chr7_1:67555117-67555136 | Msa1032590:CDS | 45.0% | |
| AGCCAATTTCGCTAAGCGTT+CGG | - | chr7_1:67555450-67555469 | None:intergenic | 45.0% | |
| AATGTATTTCCCTGGAGCTG+GGG | - | chr7_1:67555642-67555661 | None:intergenic | 45.0% | |
| GAATGTATTTCCCTGGAGCT+GGG | - | chr7_1:67555643-67555662 | None:intergenic | 45.0% | |
| TAGATGAGGAAGAGCTCATG+TGG | - | chr7_1:67555693-67555712 | None:intergenic | 45.0% | |
| !! | TAAATAAAATTTCAAAATTA+GGG | + | chr7_1:67553178-67553197 | Msa1032590:CDS | 5.0% |
| GCGGAAAGGACAGTTTGCAA+AGG | + | chr7_1:67550883-67550902 | Msa1032590:CDS | 50.0% | |
| ATGTAGTCAGGCTCGGGAAA+TGG | + | chr7_1:67551012-67551031 | Msa1032590:CDS | 50.0% | |
| TGCTATGTCAGTGAGGGGAA+AGG | + | chr7_1:67551094-67551113 | Msa1032590:CDS | 50.0% | |
| TGTCAGTGAGGGGAAAGGAA+AGG | + | chr7_1:67551099-67551118 | Msa1032590:CDS | 50.0% | |
| GATGAGCTGTCATCTGCACA+TGG | - | chr7_1:67551558-67551577 | None:intergenic | 50.0% | |
| CAGGAGCAGAAAGATCAGGT+CGG | - | chr7_1:67551690-67551709 | None:intergenic | 50.0% | |
| ! | CTGCCAGAGTTCAAGTTTGG+TGG | - | chr7_1:67551761-67551780 | None:intergenic | 50.0% |
| CACCAAACTTGAACTCTGGC+AGG | + | chr7_1:67551759-67551778 | Msa1032590:CDS | 50.0% | |
| TTGTCTCTCCACAGCTCTCA+AGG | + | chr7_1:67552308-67552327 | Msa1032590:intron | 50.0% | |
| AGTGATGACCTTGAGAGCTG+TGG | - | chr7_1:67552319-67552338 | None:intergenic | 50.0% | |
| !! | GTTTGCTTCATCGGTTCCAG+AGG | + | chr7_1:67553212-67553231 | Msa1032590:CDS | 50.0% |
| TACCCTGAGGTTGCTACAAC+AGG | + | chr7_1:67553275-67553294 | Msa1032590:CDS | 50.0% | |
| CACCTGTTGTAGCAACCTCA+GGG | - | chr7_1:67553280-67553299 | None:intergenic | 50.0% | |
| TGGGGTAGCACACCTATTGT+AGG | + | chr7_1:67553674-67553693 | Msa1032590:intron | 50.0% | |
| GGGGTAGCACACCTATTGTA+GGG | + | chr7_1:67553675-67553694 | Msa1032590:intron | 50.0% | |
| GGGTAGCACACCTATTGTAG+GGG | + | chr7_1:67553676-67553695 | Msa1032590:intron | 50.0% | |
| CACACCTATTGTAGGGGAGA+TGG | + | chr7_1:67553682-67553701 | Msa1032590:intron | 50.0% | |
| GTCTTGAGGCTGATGGCTTA+AGG | + | chr7_1:67553987-67554006 | Msa1032590:CDS | 50.0% | |
| GGAGGAATCAAAAGAAGCCG+CGG | + | chr7_1:67554309-67554328 | Msa1032590:CDS | 50.0% | |
| CAAAAGAAGCCGCGGAACAA+AGG | + | chr7_1:67554317-67554336 | Msa1032590:CDS | 50.0% | |
| CCTCTTGCTGCATCAAACCA+TGG | - | chr7_1:67554774-67554793 | None:intergenic | 50.0% | |
| CCATGGTTTGATGCAGCAAG+AGG | + | chr7_1:67554771-67554790 | Msa1032590:intron | 50.0% | |
| TGATGCAGCAAGAGGCTGAA+CGG | + | chr7_1:67554779-67554798 | Msa1032590:intron | 50.0% | |
| AAGGGAGGAATCCAGGAAAC+AGG | + | chr7_1:67555031-67555050 | Msa1032590:CDS | 50.0% | |
| AGGAATCCAGGAAACAGGAG+AGG | + | chr7_1:67555036-67555055 | Msa1032590:CDS | 50.0% | |
| GGAATCCAGGAAACAGGAGA+GGG | + | chr7_1:67555037-67555056 | Msa1032590:CDS | 50.0% | |
| ! | GAAGAAGCTCGGAAGCATGA+AGG | + | chr7_1:67555128-67555147 | Msa1032590:CDS | 50.0% |
| GACCGAACGCTTAGCGAAAT+TGG | + | chr7_1:67555445-67555464 | Msa1032590:CDS | 50.0% | |
| AACCCAACGAACCAGCTTTG+AGG | + | chr7_1:67555552-67555571 | Msa1032590:CDS | 50.0% | |
| GGCTTATAAGGCCTCAAAGC+TGG | - | chr7_1:67555566-67555585 | None:intergenic | 50.0% | |
| GGAATGTATTTCCCTGGAGC+TGG | - | chr7_1:67555644-67555663 | None:intergenic | 50.0% | |
| TACATTCCCAAGTTCCGACG+AGG | + | chr7_1:67555656-67555675 | Msa1032590:CDS | 50.0% | |
| TGGTTTAAGCTCCTCCTCGT+CGG | - | chr7_1:67555673-67555692 | None:intergenic | 50.0% | |
| AACTCACCGGAGTTGTTCGC+CGG | + | chr7_1:67550412-67550431 | Msa1032590:five_prime_UTR | 55.0% | |
| AGAGGCGGATAAAAGGCCAG+AGG | + | chr7_1:67551060-67551079 | Msa1032590:CDS | 55.0% | |
| TCAGGTCGGTCACGTTGATC+CGG | - | chr7_1:67551676-67551695 | None:intergenic | 55.0% | |
| CTTTCCCTCATTTGCGCTCC+CGG | + | chr7_1:67552233-67552252 | Msa1032590:intron | 55.0% | |
| ! | ACTACCGGGAGCGCAAATGA+GGG | - | chr7_1:67552240-67552259 | None:intergenic | 55.0% |
| ! | TACTACCGGGAGCGCAAATG+AGG | - | chr7_1:67552241-67552260 | None:intergenic | 55.0% |
| GCACCTGTTGTAGCAACCTC+AGG | - | chr7_1:67553281-67553300 | None:intergenic | 55.0% | |
| GTCTGCTCCGCTTATCGAAG+CGG | + | chr7_1:67554546-67554565 | Msa1032590:CDS | 55.0% | |
| GGCATATCAACAGCGCCTAG+TGG | + | chr7_1:67554567-67554586 | Msa1032590:CDS | 55.0% | |
| AACAGCGCCTAGTGGAAGAG+AGG | + | chr7_1:67554575-67554594 | Msa1032590:CDS | 55.0% | |
| AAGAGGCTGAACGGAAGGAG+CGG | + | chr7_1:67554788-67554807 | Msa1032590:CDS | 55.0% | |
| GGAAGGAGCGGCTTAGTCAT+AGG | + | chr7_1:67554800-67554819 | Msa1032590:CDS | 55.0% | |
| GGAGCGGCTTAGTCATAGGA+TGG | + | chr7_1:67554804-67554823 | Msa1032590:CDS | 55.0% | |
| CCTCCCTTTCTCTCCTCAGT+CGG | - | chr7_1:67555019-67555038 | None:intergenic | 55.0% | |
| GGAGAGAAAGGGAGGAATCC+AGG | + | chr7_1:67555024-67555043 | Msa1032590:CDS | 55.0% | |
| !! | GGCCTCAAAGCTGGTTCGTT+GGG | - | chr7_1:67555557-67555576 | None:intergenic | 55.0% |
| !! | AGGCCTCAAAGCTGGTTCGT+TGG | - | chr7_1:67555558-67555577 | None:intergenic | 55.0% |
| AGCAGACTCCAATGGACGAC+GGG | - | chr7_1:67555594-67555613 | None:intergenic | 55.0% | |
| GAGCAGACTCCAATGGACGA+CGG | - | chr7_1:67555595-67555614 | None:intergenic | 55.0% | |
| ATTCCCAAGTTCCGACGAGG+AGG | + | chr7_1:67555659-67555678 | Msa1032590:CDS | 55.0% | |
| TCAGGGGGTTGGGTGACCTT+TGG | + | chr7_1:67552977-67552996 | Msa1032590:intron | 60.0% | |
| CAGGGGGTTGGGTGACCTTT+GGG | + | chr7_1:67552978-67552997 | Msa1032590:intron | 60.0% | |
| CTAGAAGAGGGAGGGCCAAC+AGG | - | chr7_1:67553372-67553391 | None:intergenic | 60.0% | |
| CTGTTGGCCCTCCCTCTTCT+AGG | + | chr7_1:67553370-67553389 | Msa1032590:intron | 60.0% | |
| GCAGCAAGAGGCTGAACGGA+AGG | + | chr7_1:67554783-67554802 | Msa1032590:intron | 60.0% | |
| CCGACTGAGGAGAGAAAGGG+AGG | + | chr7_1:67555016-67555035 | Msa1032590:CDS | 60.0% | |
| CGACGGGCAGGAGGCTTATA+AGG | - | chr7_1:67555578-67555597 | None:intergenic | 60.0% | |
| GCAGCAGGAGCAGACTCCAA+TGG | - | chr7_1:67555602-67555621 | None:intergenic | 60.0% | |
| GAGGAAGTTGCAGGTGCAGC+AGG | - | chr7_1:67555617-67555636 | None:intergenic | 60.0% | |
| GCTCCTCCTCGTCGGAACTT+GGG | - | chr7_1:67555665-67555684 | None:intergenic | 60.0% | |
| AGCTCCTCCTCGTCGGAACT+TGG | - | chr7_1:67555666-67555685 | None:intergenic | 60.0% | |
| TGGTGGCCGGCGAACAACTC+CGG | - | chr7_1:67550421-67550440 | None:intergenic | 65.0% | |
| TCCAATGGACGACGGGCAGG+AGG | - | chr7_1:67555587-67555606 | None:intergenic | 65.0% | |
| GACTCCAATGGACGACGGGC+AGG | - | chr7_1:67555590-67555609 | None:intergenic | 65.0% | |
| GCTGGGGCTGAGGAAGTTGC+AGG | - | chr7_1:67555626-67555645 | None:intergenic | 65.0% | |
| ACTTCCTCAGCCCCAGCTCC+AGG | + | chr7_1:67555629-67555648 | Msa1032590:CDS | 65.0% | |
| CTTCCTCAGCCCCAGCTCCA+GGG | + | chr7_1:67555630-67555649 | Msa1032590:CDS | 65.0% | |
| TTTCCCTGGAGCTGGGGCTG+AGG | - | chr7_1:67555636-67555655 | None:intergenic | 65.0% | |
| GCCTCCTGCCCGTCGTCCAT+TGG | + | chr7_1:67555583-67555602 | Msa1032590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 67550408 | 67555911 | 67550408 | ID=Msa1032590;Name=Msa1032590 |
| chr7_1 | mRNA | 67550408 | 67555911 | 67550408 | ID=Msa1032590-mRNA-1;Parent=Msa1032590;Name=Msa1032590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=68|0.78|0.53|1|0.71|0.53|15|223|831 |
| chr7_1 | exon | 67550408 | 67550446 | 67550408 | ID=Msa1032590-mRNA-1:exon:15493;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67550601 | 67550675 | 67550601 | ID=Msa1032590-mRNA-1:exon:15494;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67550750 | 67550967 | 67550750 | ID=Msa1032590-mRNA-1:exon:15495;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67550998 | 67551231 | 67550998 | ID=Msa1032590-mRNA-1:exon:15496;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67551565 | 67551780 | 67551565 | ID=Msa1032590-mRNA-1:exon:15497;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67551871 | 67552031 | 67551871 | ID=Msa1032590-mRNA-1:exon:15498;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67552044 | 67552224 | 67552044 | ID=Msa1032590-mRNA-1:exon:15499;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67552322 | 67552351 | 67552322 | ID=Msa1032590-mRNA-1:exon:15500;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67553069 | 67553296 | 67553069 | ID=Msa1032590-mRNA-1:exon:15501;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67553392 | 67553553 | 67553392 | ID=Msa1032590-mRNA-1:exon:15502;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67553986 | 67554219 | 67553986 | ID=Msa1032590-mRNA-1:exon:15503;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67554301 | 67554621 | 67554301 | ID=Msa1032590-mRNA-1:exon:15504;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67554787 | 67554834 | 67554787 | ID=Msa1032590-mRNA-1:exon:15505;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67555002 | 67555149 | 67555002 | ID=Msa1032590-mRNA-1:exon:15506;Parent=Msa1032590-mRNA-1 |
| chr7_1 | exon | 67555420 | 67555911 | 67555420 | ID=Msa1032590-mRNA-1:exon:15507;Parent=Msa1032590-mRNA-1 |
| chr7_1 | five_prime_UTR | 67550408 | 67550446 | 67550408 | ID=Msa1032590-mRNA-1:five_prime_utr;Parent=Msa1032590-mRNA-1 |
| chr7_1 | five_prime_UTR | 67550601 | 67550629 | 67550601 | ID=Msa1032590-mRNA-1:five_prime_utr;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67550630 | 67550675 | 67550630 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67550750 | 67550967 | 67550750 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67550998 | 67551231 | 67550998 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67551565 | 67551780 | 67551565 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67551871 | 67552031 | 67551871 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67552044 | 67552224 | 67552044 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67552322 | 67552351 | 67552322 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67553069 | 67553296 | 67553069 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67553392 | 67553553 | 67553392 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67553986 | 67554219 | 67553986 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67554301 | 67554621 | 67554301 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67554787 | 67554834 | 67554787 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67555002 | 67555149 | 67555002 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | CDS | 67555420 | 67555688 | 67555420 | ID=Msa1032590-mRNA-1:cds;Parent=Msa1032590-mRNA-1 |
| chr7_1 | three_prime_UTR | 67555689 | 67555911 | 67555689 | ID=Msa1032590-mRNA-1:three_prime_utr;Parent=Msa1032590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
