Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072380 | XP_003624762.2 | 90.954 | 818 | 53 | 5 | 1 | 814 | 49 | 849 | 0.0 | 1342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072380 | sp|Q9LD55|EIF3A_ARATH | 60.487 | 863 | 279 | 9 | 1 | 811 | 50 | 902 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072380 | G7L2M2 | 90.954 | 818 | 53 | 5 | 1 | 814 | 49 | 849 | 0.0 | 1342 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020390 | Msa1072380 | 0.800074 | 1.709225e-48 | -8.615850e-47 |
| Msa0118540 | Msa1072380 | 0.816043 | 6.776786e-52 | -8.615850e-47 |
| Msa0701100 | Msa1072380 | 0.800459 | 1.427374e-48 | -8.615850e-47 |
| Msa0160960 | Msa1072380 | 0.800040 | 1.736707e-48 | -8.615850e-47 |
| Msa0167980 | Msa1072380 | 0.804938 | 1.698349e-49 | -8.615850e-47 |
| Msa0233370 | Msa1072380 | 0.808500 | 3.004309e-50 | -8.615850e-47 |
| Msa1029050 | Msa1072380 | 0.805910 | 1.062450e-49 | -8.615850e-47 |
| Msa1032590 | Msa1072380 | 0.828743 | 7.588860e-55 | -8.615850e-47 |
| Msa1072380 | Msa1133230 | 0.802789 | 4.748826e-49 | -8.615850e-47 |
| Msa1072380 | Msa1316360 | 0.810420 | 1.162857e-50 | -8.615850e-47 |
| Msa0542560 | Msa1072380 | 0.813052 | 3.111442e-51 | -8.615850e-47 |
| Msa0544840 | Msa1072380 | 0.801245 | 9.861555e-49 | -8.615850e-47 |
| Msa0547160 | Msa1072380 | 0.806130 | 9.553090e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072380 | MtrunA17_Chr7g0254441 | 91.411 | 815 | 56 | 5 | 1 | 814 | 49 | 850 | 0.0 | 1341 |
| Msa1072380 | MtrunA17_Chr7g0262991 | 72.706 | 872 | 165 | 10 | 1 | 814 | 50 | 906 | 0.0 | 1116 |
| Msa1072380 | MtrunA17_Chr7g0262301 | 59.877 | 162 | 40 | 3 | 583 | 726 | 53 | 207 | 1.51e-38 | 142 |
| Msa1072380 | MtrunA17_Chr7g0234611 | 52.381 | 168 | 61 | 4 | 475 | 642 | 1 | 149 | 8.03e-34 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1072380 | AT4G11420.1 | 60.487 | 863 | 279 | 9 | 1 | 811 | 50 | 902 | 0.0 | 902 |
Find 183 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAATAAAATTTCAAAATT+AGG | 0.044115 | 7_2:-69414409 | Msa1072380:CDS |
| ACGGAGTTTCTTACTGTTTC+TGG | 0.091295 | 7_2:+69417023 | None:intergenic |
| TTAAGTTGATCGAAATATTT+TGG | 0.143698 | 7_2:-69415629 | Msa1072380:CDS |
| TAAATAAAATTTCAAAATTA+GGG | 0.184400 | 7_2:-69414408 | Msa1072380:CDS |
| TATAAAACTAAAATGGATTT+TGG | 0.196428 | 7_2:+69411779 | None:intergenic |
| GACCGAACGCTTAGCGAAAT+TGG | 0.228268 | 7_2:-69412140 | Msa1072380:CDS |
| AATTTCTCTGGGAAACTTAC+AGG | 0.229054 | 7_2:-69416430 | Msa1072380:CDS |
| TTGATTGTATAAAACTAAAA+TGG | 0.238213 | 7_2:+69411772 | None:intergenic |
| AGATACAATGGCAAGCTTTC+AGG | 0.241537 | 7_2:+69415882 | None:intergenic |
| GAAGGACATTTACTATCTTT+TGG | 0.243392 | 7_2:-69414479 | Msa1072380:CDS |
| CTGAGACGTTCTTAGATTAC+AGG | 0.261287 | 7_2:-69411803 | Msa1072380:three_prime_UTR |
| CCCTATCGTTTAAATTTCTC+TGG | 0.262543 | 7_2:-69416442 | Msa1072380:CDS |
| TTTGCTCCCATCTTTGTTAG+AGG | 0.270180 | 7_2:-69413489 | Msa1072380:CDS |
| GCAAGTGAATGTTTGTTCTT+TGG | 0.276030 | 7_2:-69416651 | Msa1072380:CDS |
| CGACGGGCAGGAGGCTTATA+AGG | 0.293713 | 7_2:+69412010 | None:intergenic |
| GGAATGTATTTCCCTGGAGC+TGG | 0.300289 | 7_2:+69411944 | None:intergenic |
| AGCTTCTTCGTGTTCTCTTT+CGG | 0.303241 | 7_2:+69413184 | None:intergenic |
| CCCATCTTTGTTAGAGGTTG+TGG | 0.305502 | 7_2:-69413483 | Msa1072380:CDS |
| AAGGAGAATCTTGTGATCTT+TGG | 0.317744 | 7_2:+69413460 | None:intergenic |
| AGAAAGAGAAGTTGAAGAAA+AGG | 0.331406 | 7_2:-69412089 | Msa1072380:CDS |
| AGCTCCTCCTCGTCGGAACT+TGG | 0.356046 | 7_2:+69411922 | None:intergenic |
| GCTGGGGCTGAGGAAGTTGC+AGG | 0.363243 | 7_2:+69411962 | None:intergenic |
| ACTTCCTCAGCCCCAGCTCC+AGG | 0.363439 | 7_2:-69411956 | Msa1072380:CDS |
| TTCTGCTGAACAGTTGAATA+AGG | 0.364744 | 7_2:-69413561 | Msa1072380:CDS |
| GGCCTCAAAGCTGGTTCGTT+GGG | 0.365386 | 7_2:+69412031 | None:intergenic |
| ATAAACTACATAAATATCTT+AGG | 0.368043 | 7_2:+69411703 | None:intergenic |
| ATGACTTAGAGGCGGATAAA+AGG | 0.374278 | 7_2:-69416535 | Msa1072380:CDS |
| AGATCTGAGTCAGAAGGATT+TGG | 0.375815 | 7_2:-69415535 | Msa1072380:CDS |
| GTCTTGAGGCTGATGGCTTA+AGG | 0.376513 | 7_2:-69413598 | Msa1072380:CDS |
| CCTCGATGTTGATGACTTAG+AGG | 0.380642 | 7_2:-69416546 | Msa1072380:CDS |
| TACCCTGAGGTTGCTACAAC+AGG | 0.382355 | 7_2:-69414311 | Msa1072380:intron |
| GAGGAAGTTGCAGGTGCAGC+AGG | 0.385636 | 7_2:+69411971 | None:intergenic |
| TGAAATCTTAAGAAACCATT+TGG | 0.388442 | 7_2:-69415955 | Msa1072380:CDS |
| ATTCAACTGTTCAGCAGAAC+TGG | 0.388584 | 7_2:+69413565 | None:intergenic |
| TTGAGGATGGCTAATCTCAT+TGG | 0.391443 | 7_2:-69415423 | Msa1072380:CDS |
| GTCATCACTTCTTGCTGAAC+TGG | 0.394710 | 7_2:-69415258 | Msa1072380:intron |
| GGCTTATCTTAACAAATATC+CGG | 0.405384 | 7_2:-69415934 | Msa1072380:CDS |
| TTCTTACTGTTTCTGGTGGC+CGG | 0.411645 | 7_2:+69417030 | None:intergenic |
| CCAGAGAAATTTAAACGATA+GGG | 0.419253 | 7_2:+69416442 | None:intergenic |
| AACCTGCCAGAGTTCAAGTT+TGG | 0.419446 | 7_2:+69415827 | None:intergenic |
| GAATGTATTTCCCTGGAGCT+GGG | 0.423482 | 7_2:+69411945 | None:intergenic |
| AAGGGAGGAATCCAGGAAAC+AGG | 0.423710 | 7_2:-69412554 | Msa1072380:CDS |
| ATGTAGTCAGGCTCGGGAAA+TGG | 0.424125 | 7_2:-69416576 | Msa1072380:CDS |
| TATGCAGAGTTAATCAATGT+TGG | 0.425125 | 7_2:-69416845 | Msa1072380:five_prime_UTR |
| TCTTGAGGCTGATGGCTTAA+GGG | 0.425941 | 7_2:-69413597 | Msa1072380:CDS |
| AGCCAATTTCGCTAAGCGTT+CGG | 0.426369 | 7_2:+69412138 | None:intergenic |
| AGTTCTCAACCTTCATTGTC+TGG | 0.434370 | 7_2:+69414180 | None:intergenic |
| AAATGATATCTCCTCCTGAT+AGG | 0.436758 | 7_2:-69413532 | Msa1072380:CDS |
| TTTCAGCTTTCTCCGTTGAC+AGG | 0.437446 | 7_2:+69416603 | None:intergenic |
| ATGAAGGTTGAGAACTTAGC+TGG | 0.441312 | 7_2:-69414173 | Msa1072380:CDS |
| CAAAAGAGGGAAGCATTGTT+AGG | 0.441865 | 7_2:-69412058 | Msa1072380:CDS |
| TCTTAAATCATTCTATGTCT+TGG | 0.443102 | 7_2:-69412724 | Msa1072380:CDS |
| TCAGGTCGGTCACGTTGATC+CGG | 0.445400 | 7_2:+69415915 | None:intergenic |
| GGAAGTTGAAGTATTATCTT+CGG | 0.445746 | 7_2:-69412516 | Msa1072380:CDS |
| GGATTAATTGCAGGCATCAA+AGG | 0.447081 | 7_2:-69414530 | Msa1072380:intron |
| TGTTTGTTCTTTGGAGGATG+TGG | 0.450506 | 7_2:-69416642 | Msa1072380:CDS |
| TACTGCGACAATTGTACCTC+TGG | 0.450975 | 7_2:+69414358 | None:intergenic |
| AAAGGACAGTTTGCAAAGGA+TGG | 0.453736 | 7_2:-69416701 | Msa1072380:CDS |
| TTGTCTCTCCACAGCTCTCA+AGG | 0.455430 | 7_2:-69415280 | Msa1072380:intron |
| GGAGAGAAAGGGAGGAATCC+AGG | 0.466378 | 7_2:-69412561 | Msa1072380:CDS |
| TTTCTTGTCTCATCCTGAGT+TGG | 0.468065 | 7_2:+69413126 | None:intergenic |
| TCAGAAAGACTTAGTGTGTA+AGG | 0.468770 | 7_2:+69411822 | None:intergenic |
| ATGCAGAGTTAATCAATGTT+GGG | 0.471050 | 7_2:-69416844 | Msa1072380:five_prime_UTR |
| GCACCTGTTGTAGCAACCTC+AGG | 0.473099 | 7_2:+69414308 | None:intergenic |
| TTAACCGACTGAGGAGAGAA+AGG | 0.473318 | 7_2:-69412573 | Msa1072380:CDS |
| AAAAGGCTGAGAAGCAAAAG+AGG | 0.475380 | 7_2:-69412072 | Msa1072380:CDS |
| CACCAAACTTGAACTCTGGC+AGG | 0.477564 | 7_2:-69415829 | Msa1072380:intron |
| TTTCCCTGGAGCTGGGGCTG+AGG | 0.477604 | 7_2:+69411952 | None:intergenic |
| CCCAGAGAAATTTAAACGAT+AGG | 0.481004 | 7_2:+69416441 | None:intergenic |
| AGTTAGTATCATAAACTCTT+GGG | 0.482757 | 7_2:-69412751 | Msa1072380:CDS |
| GATTAATTGCAGGCATCAAA+GGG | 0.484948 | 7_2:-69414529 | Msa1072380:intron |
| AAGTTAGTATCATAAACTCT+TGG | 0.485793 | 7_2:-69412752 | Msa1072380:CDS |
| GGCTTATAAGGCCTCAAAGC+TGG | 0.486004 | 7_2:+69412022 | None:intergenic |
| GGAAGGAGCGGCTTAGTCAT+AGG | 0.486494 | 7_2:-69412785 | Msa1072380:CDS |
| CAAAAGAAGCCGCGGAACAA+AGG | 0.492609 | 7_2:-69413268 | Msa1072380:CDS |
| GCCACAACCTCTAACAAAGA+TGG | 0.493344 | 7_2:+69413482 | None:intergenic |
| ACTCAGGATGAGACAAGAAA+TGG | 0.493462 | 7_2:-69413123 | Msa1072380:CDS |
| TATCAGAGTCTTGAGGCTGA+TGG | 0.495297 | 7_2:-69413605 | Msa1072380:intron |
| CCTATCGTTTAAATTTCTCT+GGG | 0.498158 | 7_2:-69416441 | Msa1072380:CDS |
| CCTCCCTTTCTCTCCTCAGT+CGG | 0.499106 | 7_2:+69412569 | None:intergenic |
| AGGAAAGGATAGATCTGATC+GGG | 0.499212 | 7_2:-69416474 | Msa1072380:CDS |
| TTGCCACCAAACTTGAACTC+TGG | 0.499698 | 7_2:-69415833 | Msa1072380:CDS |
| TGGTGGCCGGCGAACAACTC+CGG | 0.499736 | 7_2:+69417043 | None:intergenic |
| AACTTGGGAATGTATTTCCC+TGG | 0.500813 | 7_2:+69411938 | None:intergenic |
| ATTTGTTAAGATAAGCCAAA+TGG | 0.504304 | 7_2:+69415940 | None:intergenic |
| CTGCCAGAGTTCAAGTTTGG+TGG | 0.508059 | 7_2:+69415830 | None:intergenic |
| GACTCCAATGGACGACGGGC+AGG | 0.508726 | 7_2:+69411998 | None:intergenic |
| GCTCCTCCTCGTCGGAACTT+GGG | 0.514574 | 7_2:+69411923 | None:intergenic |
| AGGAATCCAGGAAACAGGAG+AGG | 0.522209 | 7_2:-69412549 | Msa1072380:CDS |
| CTTTCAGGAGCAGAAAGATC+AGG | 0.522693 | 7_2:+69415897 | None:intergenic |
| AACTCACCGGAGTTGTTCGC+CGG | 0.523099 | 7_2:-69417049 | Msa1072380:five_prime_UTR |
| TGATATGCCGCTTCGATAAG+CGG | 0.524970 | 7_2:+69413032 | None:intergenic |
| AGCAGACTCCAATGGACGAC+GGG | 0.526295 | 7_2:+69411994 | None:intergenic |
| TTTAGAACTAGAGCATGAAA+AGG | 0.528665 | 7_2:-69415454 | Msa1072380:CDS |
| TAGTAAGCCGTCATCAAAGA+TGG | 0.530774 | 7_2:+69415654 | None:intergenic |
| AACCCAACGAACCAGCTTTG+AGG | 0.530816 | 7_2:-69412033 | Msa1072380:CDS |
| ATGAAAAGGAGCGAAATTTG+AGG | 0.531777 | 7_2:-69415440 | Msa1072380:CDS |
| GTTGAAGTATTATCTTCGGT+TGG | 0.532254 | 7_2:-69412512 | Msa1072380:CDS |
| AGTGAATGTTTGTTCTTTGG+AGG | 0.533682 | 7_2:-69416648 | Msa1072380:CDS |
| AAAAGCATGTAGTCAGGCTC+GGG | 0.541288 | 7_2:-69416582 | Msa1072380:CDS |
| TCTTGAAAAGCCTCTTGAAA+CGG | 0.542395 | 7_2:-69413387 | Msa1072380:intron |
| AGGCCTCAAAGCTGGTTCGT+TGG | 0.543729 | 7_2:+69412030 | None:intergenic |
| TGGTTTCTATCAGAGTCTTG+AGG | 0.545464 | 7_2:-69413612 | Msa1072380:intron |
| CTTCGAAAAGATACCGATCA+TGG | 0.545492 | 7_2:-69416781 | Msa1072380:five_prime_UTR |
| TGAATTTGACTAACCAACTC+AGG | 0.546210 | 7_2:-69413139 | Msa1072380:CDS |
| AAGGACAGTTTGCAAAGGAT+GGG | 0.547433 | 7_2:-69416700 | Msa1072380:CDS |
| GATAGGAAACAATCAAAACT+TGG | 0.547729 | 7_2:-69413515 | Msa1072380:CDS |
| TACTTTAAGTGCAAAGTCTG+AGG | 0.549443 | 7_2:+69414441 | None:intergenic |
| GAAAATCAATTATTGAGAAG+AGG | 0.554721 | 7_2:-69413433 | Msa1072380:CDS |
| AACCAGTATACCGTTTCAAG+AGG | 0.557814 | 7_2:+69413377 | None:intergenic |
| ACTGAAACCATCTTTGATGA+CGG | 0.557917 | 7_2:-69415661 | Msa1072380:CDS |
| AATGTATTTCCCTGGAGCTG+GGG | 0.559727 | 7_2:+69411946 | None:intergenic |
| TCCAATGGACGACGGGCAGG+AGG | 0.562752 | 7_2:+69412001 | None:intergenic |
| TAGCACATCAACAAGTCCTC+TGG | 0.564274 | 7_2:+69416512 | None:intergenic |
| AATAAAATTTCAAAATTAGG+GGG | 0.566405 | 7_2:-69414406 | Msa1072380:CDS |
| CCACAACCTCTAACAAAGAT+GGG | 0.569465 | 7_2:+69413483 | None:intergenic |
| ATTTATATCATGCATATGCA+TGG | 0.570202 | 7_2:-69415593 | Msa1072380:CDS |
| AGATCTGTTGAAGATATACA+TGG | 0.573495 | 7_2:-69415708 | Msa1072380:CDS |
| CTTCCTCAGCCCCAGCTCCA+GGG | 0.573704 | 7_2:-69411955 | Msa1072380:CDS |
| GCAGCAAGAGGCTGAACGGA+AGG | 0.577552 | 7_2:-69412802 | Msa1072380:intron |
| GAGTTTCTTACTGTTTCTGG+TGG | 0.578883 | 7_2:+69417026 | None:intergenic |
| TGATGGCTTAAGGGATCACT+TGG | 0.580040 | 7_2:-69413588 | Msa1072380:CDS |
| TTTGATTGTTTCCTATCAGG+AGG | 0.581585 | 7_2:+69413521 | None:intergenic |
| TGGTTTAAGCTCCTCCTCGT+CGG | 0.583485 | 7_2:+69411915 | None:intergenic |
| CTGAACAGTTGAATAAGGCA+AGG | 0.583947 | 7_2:-69413556 | Msa1072380:CDS |
| AAATAAAATTTCAAAATTAG+GGG | 0.584185 | 7_2:-69414407 | Msa1072380:CDS |
| TGATGTTTGAAAGGAACAAG+AGG | 0.584337 | 7_2:-69413297 | Msa1072380:intron |
| CTCTAAGTCATCAACATCGA+GGG | 0.588680 | 7_2:+69416547 | None:intergenic |
| TAACCGACTGAGGAGAGAAA+GGG | 0.588724 | 7_2:-69412572 | Msa1072380:CDS |
| TGCTATGTCAGTGAGGGGAA+AGG | 0.590991 | 7_2:-69416494 | Msa1072380:CDS |
| GGAGCGGCTTAGTCATAGGA+TGG | 0.592641 | 7_2:-69412781 | Msa1072380:CDS |
| TAAAAGCTGCCTTTGTTCCG+CGG | 0.594487 | 7_2:+69413259 | None:intergenic |
| GCAGCAGGAGCAGACTCCAA+TGG | 0.596770 | 7_2:+69411986 | None:intergenic |
| ACTTTAAGTGCAAAGTCTGA+GGG | 0.597810 | 7_2:+69414442 | None:intergenic |
| ATGAGCAGAGGATTAATCAA+AGG | 0.599357 | 7_2:-69413223 | Msa1072380:CDS |
| AAGAGGCTGAACGGAAGGAG+CGG | 0.601194 | 7_2:-69412797 | Msa1072380:CDS |
| CAATAAAGATCTGAGTCAGA+AGG | 0.601515 | 7_2:-69415541 | Msa1072380:CDS |
| AAGGAAAGGATAGATCTGAT+CGG | 0.604202 | 7_2:-69416475 | Msa1072380:CDS |
| AAAGGCTGAGAAGCAAAAGA+GGG | 0.605646 | 7_2:-69412071 | Msa1072380:CDS |
| TATACATGGCCTAATGTGCA+TGG | 0.608093 | 7_2:-69415694 | Msa1072380:CDS |
| GGAATCCAGGAAACAGGAGA+GGG | 0.608341 | 7_2:-69412548 | Msa1072380:CDS |
| TGATGCAGCAAGAGGCTGAA+CGG | 0.608489 | 7_2:-69412806 | Msa1072380:intron |
| TAATGTGTACCAGACAATGA+AGG | 0.610494 | 7_2:-69414189 | Msa1072380:CDS |
| GTTTGCTTCATCGGTTCCAG+AGG | 0.612314 | 7_2:-69414374 | Msa1072380:CDS |
| CACCTGTTGTAGCAACCTCA+GGG | 0.614215 | 7_2:+69414309 | None:intergenic |
| TGTTTGAAAGGAACAAGAGG+AGG | 0.615138 | 7_2:-69413294 | Msa1072380:intron |
| GGATAGTGCTTGAAATATTG+CGG | 0.617202 | 7_2:-69416409 | Msa1072380:CDS |
| TGAATGAGGAGGAAGAAGCT+CGG | 0.617520 | 7_2:-69412468 | Msa1072380:CDS |
| AATCTAGTATCAAGATACAA+TGG | 0.618117 | 7_2:+69415870 | None:intergenic |
| GAAGAATCCTCTCTTCCACT+AGG | 0.618520 | 7_2:+69413003 | None:intergenic |
| TAGATGAGGAAGAGCTCATG+TGG | 0.620693 | 7_2:+69411895 | None:intergenic |
| GAAGAAGCTCGGAAGCATGA+AGG | 0.620720 | 7_2:-69412457 | Msa1072380:intron |
| TCTAACAAAGATGGGAGCAA+AGG | 0.620872 | 7_2:+69413491 | None:intergenic |
| TGAAGGTTGAGAACTTAGCT+GGG | 0.621260 | 7_2:-69414172 | Msa1072380:CDS |
| AGCTGAAAGACGTAGACATG+AGG | 0.621599 | 7_2:-69413165 | Msa1072380:CDS |
| GGAGGAATCAAAAGAAGCCG+CGG | 0.627667 | 7_2:-69413276 | Msa1072380:CDS |
| CTGAGATACTTGAAAAGCAG+AGG | 0.630519 | 7_2:-69412117 | Msa1072380:CDS |
| GAGCAGACTCCAATGGACGA+CGG | 0.633943 | 7_2:+69411993 | None:intergenic |
| AGATATTATTTAACCGACTG+AGG | 0.634671 | 7_2:-69412582 | Msa1072380:CDS |
| AGTTCTAAATTACAATCATG+AGG | 0.634819 | 7_2:+69415468 | None:intergenic |
| GTCTGCTCCGCTTATCGAAG+CGG | 0.637953 | 7_2:-69413039 | Msa1072380:CDS |
| TTGATGTGCTATGTCAGTGA+GGG | 0.639041 | 7_2:-69416500 | Msa1072380:CDS |
| TAAGATGAATAGCGGCAAAG+TGG | 0.639577 | 7_2:-69415385 | Msa1072380:intron |
| GCGGAAAGGACAGTTTGCAA+AGG | 0.642079 | 7_2:-69416705 | Msa1072380:CDS |
| TGTCAGTGAGGGGAAAGGAA+AGG | 0.642611 | 7_2:-69416489 | Msa1072380:CDS |
| AACAGCGCCTAGTGGAAGAG+AGG | 0.644173 | 7_2:-69413010 | Msa1072380:CDS |
| TGAACAGTTGAATAAGGCAA+GGG | 0.644378 | 7_2:-69413555 | Msa1072380:CDS |
| TTGTGTGTAGACTTGCGGAA+AGG | 0.649903 | 7_2:-69416719 | Msa1072380:CDS |
| AAAGGAGCGAAATTTGAGGA+TGG | 0.656185 | 7_2:-69415436 | Msa1072380:CDS |
| ATTCCCAAGTTCCGACGAGG+AGG | 0.656196 | 7_2:-69411926 | Msa1072380:CDS |
| CCGACTGAGGAGAGAAAGGG+AGG | 0.658903 | 7_2:-69412569 | Msa1072380:CDS |
| GGCATATCAACAGCGCCTAG+TGG | 0.663162 | 7_2:-69413018 | Msa1072380:CDS |
| CGATGTTGATGACTTAGAGG+CGG | 0.666640 | 7_2:-69416543 | Msa1072380:CDS |
| TAGAGTTGTGTGTAGACTTG+CGG | 0.671483 | 7_2:-69416724 | Msa1072380:CDS |
| TCTAAATTACAATCATGAGG+AGG | 0.675689 | 7_2:+69415471 | None:intergenic |
| CCTCTAAGTCATCAACATCG+AGG | 0.682770 | 7_2:+69416546 | None:intergenic |
| CGGTATATAATAATGAGCAG+AGG | 0.687543 | 7_2:-69413235 | Msa1072380:CDS |
| TTGTGTTGCACAAGACGTGA+AGG | 0.689912 | 7_2:-69414497 | Msa1072380:CDS |
| TACATTCCCAAGTTCCGACG+AGG | 0.691051 | 7_2:-69411929 | Msa1072380:CDS |
| CAGGAGCAGAAAGATCAGGT+CGG | 0.694773 | 7_2:+69415901 | None:intergenic |
| GTTGATGTGCTATGTCAGTG+AGG | 0.699792 | 7_2:-69416501 | Msa1072380:CDS |
| AGAGGCGGATAAAAGGCCAG+AGG | 0.738928 | 7_2:-69416528 | Msa1072380:CDS |
| TGATGTGCTATGTCAGTGAG+GGG | 0.753887 | 7_2:-69416499 | Msa1072380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTAAAAAAATGATATTTT+AGG | - | chr7_2:69412651-69412670 | Msa1072380:intron | 10.0% |
| !! | CTAAATAAAATTTCAAAATT+AGG | - | chr7_2:69414340-69414359 | Msa1072380:CDS | 10.0% |
| !! | AAATAAAATTTCAAAATTAG+GGG | - | chr7_2:69414342-69414361 | Msa1072380:CDS | 10.0% |
| !!! | ACATTTTATATATACATAAC+AGG | + | chr7_2:69412524-69412543 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTAATATTTAGTG+TGG | - | chr7_2:69413705-69413724 | Msa1072380:intron | 15.0% |
| !!! | TTTGAAATTTTATTTAGCAA+GGG | + | chr7_2:69414337-69414356 | None:intergenic | 15.0% |
| !!! | TTTTGAAATTTTATTTAGCA+AGG | + | chr7_2:69414338-69414357 | None:intergenic | 15.0% |
| !! | AATAAAATTTCAAAATTAGG+GGG | - | chr7_2:69414343-69414362 | Msa1072380:CDS | 15.0% |
| !!! | TATAAAACTAAAATGGATTT+TGG | + | chr7_2:69416973-69416992 | None:intergenic | 15.0% |
| !! | TTGATTGTATAAAACTAAAA+TGG | + | chr7_2:69416980-69416999 | None:intergenic | 15.0% |
| !!! | TGATTTAGATTTTAATTTTG+TGG | - | chr7_2:69417014-69417033 | Msa1072380:intron | 15.0% |
| !! | ATAAACTACATAAATATCTT+AGG | + | chr7_2:69417049-69417068 | None:intergenic | 15.0% |
| !! | ACAAAATTGTCAAGAAAAAA+CGG | + | chr7_2:69411797-69411816 | None:intergenic | 20.0% |
| !!! | GTGTTTTAAACATTTAATAG+AGG | - | chr7_2:69412545-69412564 | Msa1072380:CDS | 20.0% |
| !! | GCAATTAATTTCTATTTATC+AGG | + | chr7_2:69412582-69412601 | None:intergenic | 20.0% |
| !! | ACAATAAAACATACAACAAT+AGG | + | chr7_2:69412635-69412654 | None:intergenic | 20.0% |
| !! | AAAGAAAAACAGAATTTAGA+AGG | - | chr7_2:69412766-69412785 | Msa1072380:CDS | 20.0% |
| !!! | TTAAGTTGATCGAAATATTT+TGG | - | chr7_2:69413120-69413139 | Msa1072380:CDS | 20.0% |
| !! | CTTAAAAATAAGATGAATAG+CGG | - | chr7_2:69413356-69413375 | Msa1072380:intron | 20.0% |
| !! | AACAAATATCTATATACTAC+CGG | + | chr7_2:69413416-69413435 | None:intergenic | 20.0% |
| !! | ATTACAATGACAGTATAAAA+GGG | + | chr7_2:69413559-69413578 | None:intergenic | 20.0% |
| !! | AATTACAATGACAGTATAAA+AGG | + | chr7_2:69413560-69413579 | None:intergenic | 20.0% |
| !!! | TTTTTAATATTTAGTGTGGT+TGG | - | chr7_2:69413709-69413728 | Msa1072380:intron | 20.0% |
| !! | TGACATCAAAAGAATTAAAA+CGG | + | chr7_2:69414055-69414074 | None:intergenic | 20.0% |
| !! | CACAAACATAAAAACAAAAA+AGG | + | chr7_2:69414471-69414490 | None:intergenic | 20.0% |
| !!! | AAATTACAACTTTTTTCATG+TGG | + | chr7_2:69414686-69414705 | None:intergenic | 20.0% |
| !! | TTATGTAAAGAACATATTCT+AGG | + | chr7_2:69415000-69415019 | None:intergenic | 20.0% |
| !!! | TATACTGGTTATTTTTCATA+TGG | - | chr7_2:69415385-69415404 | Msa1072380:intron | 20.0% |
| !!! | TTATTTTTCATATGGTACAT+TGG | - | chr7_2:69415393-69415412 | Msa1072380:CDS | 20.0% |
| !!! | TATTTTTCATATGGTACATT+GGG | - | chr7_2:69415394-69415413 | Msa1072380:CDS | 20.0% |
| !! | GAAAAAATTAAGTAAAACCA+TGG | - | chr7_2:69415659-69415678 | Msa1072380:CDS | 20.0% |
| !! | TTGTAAAGAAAAAATAGATG+AGG | + | chr7_2:69416871-69416890 | None:intergenic | 20.0% |
| ! | TGTTAAAGAAAAGAAAAACC+AGG | + | chr7_2:69411752-69411771 | None:intergenic | 25.0% |
| !!! | CTTGACAATTTTGTTGATTA+TGG | - | chr7_2:69411803-69411822 | Msa1072380:three_prime_UTR | 25.0% |
| !! | GGCTGAAATTTTATTGTTAT+TGG | - | chr7_2:69411824-69411843 | Msa1072380:three_prime_UTR | 25.0% |
| !!! | TGATTATCACTCTTTTTTAC+AGG | - | chr7_2:69411856-69411875 | Msa1072380:three_prime_UTR | 25.0% |
| ! | TATATACATAACAGGTAACT+TGG | + | chr7_2:69412516-69412535 | None:intergenic | 25.0% |
| ! | TTTAAACATTTAATAGAGGC+AGG | - | chr7_2:69412549-69412568 | Msa1072380:CDS | 25.0% |
| ! | TGAAATCTTAAGAAACCATT+TGG | - | chr7_2:69412794-69412813 | Msa1072380:CDS | 25.0% |
| !! | ATTTGTTAAGATAAGCCAAA+TGG | + | chr7_2:69412812-69412831 | None:intergenic | 25.0% |
| ! | AATCTAGTATCAAGATACAA+TGG | + | chr7_2:69412882-69412901 | None:intergenic | 25.0% |
| !! | CATTTTTCTTTACATCTTCA+AGG | - | chr7_2:69412955-69412974 | Msa1072380:intron | 25.0% |
| ! | ATTTATATCATGCATATGCA+TGG | - | chr7_2:69413156-69413175 | Msa1072380:CDS | 25.0% |
| !!! | AGTTCTAAATTACAATCATG+AGG | + | chr7_2:69413284-69413303 | None:intergenic | 25.0% |
| ! | ACAAATATCTATATACTACC+GGG | + | chr7_2:69413415-69413434 | None:intergenic | 25.0% |
| ! | TATCATGAAGTGTATTGTTA+TGG | - | chr7_2:69413585-69413604 | Msa1072380:CDS | 25.0% |
| ! | ATACTAATGAAGGTAAATAG+TGG | + | chr7_2:69413854-69413873 | None:intergenic | 25.0% |
| ! | ACTATTTACCTTCATTAGTA+TGG | - | chr7_2:69413853-69413872 | Msa1072380:intron | 25.0% |
| ! | CGATATTTCATGTTATTAGA+TGG | - | chr7_2:69413880-69413899 | Msa1072380:intron | 25.0% |
| ! | TTCATGTTATTAGATGGAAA+AGG | - | chr7_2:69413886-69413905 | Msa1072380:intron | 25.0% |
| ! | GACATCAAAAGAATTAAAAC+GGG | + | chr7_2:69414054-69414073 | None:intergenic | 25.0% |
| !! | TTTAGAACCCATTATCTATA+AGG | - | chr7_2:69414116-69414135 | Msa1072380:CDS | 25.0% |
| ! | TTTATGTTTGGATTAATTGC+AGG | - | chr7_2:69414210-69414229 | Msa1072380:intron | 25.0% |
| !!! | AGGTATGTTTTCCTTTATTT+TGG | - | chr7_2:69414715-69414734 | Msa1072380:intron | 25.0% |
| !! | ATGTTATTTGACGAATACAT+TGG | - | chr7_2:69414895-69414914 | Msa1072380:intron | 25.0% |
| !! | AACTCATTATTTTCCATGTT+GGG | + | chr7_2:69414956-69414975 | None:intergenic | 25.0% |
| !! | TAACTCATTATTTTCCATGT+TGG | + | chr7_2:69414957-69414976 | None:intergenic | 25.0% |
| ! | GAAAATCAATTATTGAGAAG+AGG | - | chr7_2:69415316-69415335 | Msa1072380:intron | 25.0% |
| !!! | AAGTAAAACCATGGATTTTT+TGG | - | chr7_2:69415668-69415687 | Msa1072380:CDS | 25.0% |
| ! | AAGTTAGTATCATAAACTCT+TGG | - | chr7_2:69415997-69416016 | Msa1072380:CDS | 25.0% |
| ! | AGTTAGTATCATAAACTCTT+GGG | - | chr7_2:69415998-69416017 | Msa1072380:CDS | 25.0% |
| ! | TCTTAAATCATTCTATGTCT+TGG | - | chr7_2:69416025-69416044 | Msa1072380:CDS | 25.0% |
| !! | AAAGAACATCGATTGTTAAA+AGG | + | chr7_2:69416070-69416089 | None:intergenic | 25.0% |
| ! | TCAATACTATATCATCTGAA+GGG | + | chr7_2:69416354-69416373 | None:intergenic | 25.0% |
| ! | TTCAATACTATATCATCTGA+AGG | + | chr7_2:69416355-69416374 | None:intergenic | 25.0% |
| !! | TTCAGATGATATAGTATTGA+AGG | - | chr7_2:69416354-69416373 | Msa1072380:intron | 25.0% |
| !! | TAACATAATCATGACTGTTT+TGG | + | chr7_2:69416424-69416443 | None:intergenic | 25.0% |
| ! | TTAAGAAGAATGAAATGCAA+AGG | + | chr7_2:69416458-69416477 | None:intergenic | 25.0% |
| ! | GTAAATACAAAATAGAGGAT+AGG | + | chr7_2:69416537-69416556 | None:intergenic | 25.0% |
| ! | GTTAGGTAAATACAAAATAG+AGG | + | chr7_2:69416542-69416561 | None:intergenic | 25.0% |
| !! | TTTTGTATTTACCTAACTTG+TGG | - | chr7_2:69416545-69416564 | Msa1072380:CDS | 25.0% |
| ! | TAAGGAAAAAGATGATCAAA+TGG | + | chr7_2:69416912-69416931 | None:intergenic | 25.0% |
| AAAGAAAAGAAAAACCAGGA+CGG | + | chr7_2:69411748-69411767 | None:intergenic | 30.0% | |
| TATGCAGAGTTAATCAATGT+TGG | - | chr7_2:69411904-69411923 | Msa1072380:exon | 30.0% | |
| ATGCAGAGTTAATCAATGTT+GGG | - | chr7_2:69411905-69411924 | Msa1072380:exon | 30.0% | |
| CCAGAGAAATTTAAACGATA+GGG | + | chr7_2:69412310-69412329 | None:intergenic | 30.0% | |
| CCTATCGTTTAAATTTCTCT+GGG | - | chr7_2:69412308-69412327 | Msa1072380:intron | 30.0% | |
| GCATACAACACATAATTATG+AGG | + | chr7_2:69412469-69412488 | None:intergenic | 30.0% | |
| AAACATACAACAATAGGCAA+TGG | + | chr7_2:69412629-69412648 | None:intergenic | 30.0% | |
| ! | TTTTGTACTGCTTACAAAAC+TGG | + | chr7_2:69412749-69412768 | None:intergenic | 30.0% |
| GGCTTATCTTAACAAATATC+CGG | - | chr7_2:69412815-69412834 | Msa1072380:intron | 30.0% | |
| AGATCTGTTGAAGATATACA+TGG | - | chr7_2:69413041-69413060 | Msa1072380:CDS | 30.0% | |
| TCTAAATTACAATCATGAGG+AGG | + | chr7_2:69413281-69413300 | None:intergenic | 30.0% | |
| ! | TTTAGAACTAGAGCATGAAA+AGG | - | chr7_2:69413295-69413314 | Msa1072380:intron | 30.0% |
| CAAAAGCAAATAGTAAGACT+TGG | + | chr7_2:69413441-69413460 | None:intergenic | 30.0% | |
| AGCTGTTAAAGTTTGTAAGT+TGG | + | chr7_2:69413773-69413792 | None:intergenic | 30.0% | |
| ! | GAGATAGTATATATTTGCTG+TGG | - | chr7_2:69413917-69413936 | Msa1072380:intron | 30.0% |
| GCTTACAATTAATGGCAAAA+AGG | + | chr7_2:69414085-69414104 | None:intergenic | 30.0% | |
| TACAGATGGCTTACAATTAA+TGG | + | chr7_2:69414093-69414112 | None:intergenic | 30.0% | |
| ! | GAAGGACATTTACTATCTTT+TGG | - | chr7_2:69414270-69414289 | Msa1072380:intron | 30.0% |
| !! | GAAATTTTATTTAGCAAGGG+TGG | + | chr7_2:69414334-69414353 | None:intergenic | 30.0% |
| ! | TAAGTTTTCGTTTGCTTCAT+CGG | - | chr7_2:69414366-69414385 | Msa1072380:CDS | 30.0% |
| !!! | TAGCTAACTTTTTAAGTGCA+GGG | + | chr7_2:69414420-69414439 | None:intergenic | 30.0% |
| !!! | TACAGAGATTTTTTCCACAA+CGG | + | chr7_2:69414625-69414644 | None:intergenic | 30.0% |
| ! | AGTTGTAATTTTCTGCAAGA+AGG | - | chr7_2:69414695-69414714 | Msa1072380:intron | 30.0% |
| ACGCAATAGAACCAAAATAA+AGG | + | chr7_2:69414729-69414748 | None:intergenic | 30.0% | |
| GTTTGAAGAGAATACTAGAT+AGG | - | chr7_2:69414787-69414806 | Msa1072380:intron | 30.0% | |
| ATAATAACAATCGAGAGAGT+TGG | - | chr7_2:69414817-69414836 | Msa1072380:intron | 30.0% | |
| TAATAACAATCGAGAGAGTT+GGG | - | chr7_2:69414818-69414837 | Msa1072380:intron | 30.0% | |
| ! | AGATGGTTAATTCCCAATTT+TGG | - | chr7_2:69414862-69414881 | Msa1072380:intron | 30.0% |
| ATGCTAAAACCACCAAAATT+GGG | + | chr7_2:69414877-69414896 | None:intergenic | 30.0% | |
| GAACATATTCTAGGTGATAA+TGG | + | chr7_2:69414991-69415010 | None:intergenic | 30.0% | |
| CAAGAAAATGCCATAACATT+TGG | + | chr7_2:69415119-69415138 | None:intergenic | 30.0% | |
| ! | CAAATGTTATGGCATTTTCT+TGG | - | chr7_2:69415117-69415136 | Msa1072380:intron | 30.0% |
| !!! | AGTTTTGATTGTTTCCTATC+AGG | + | chr7_2:69415234-69415253 | None:intergenic | 30.0% |
| GATAGGAAACAATCAAAACT+TGG | - | chr7_2:69415234-69415253 | Msa1072380:intron | 30.0% | |
| !! | CAATAATTGATTTTCGAGCA+AGG | + | chr7_2:69415311-69415330 | None:intergenic | 30.0% |
| ! | CTTTCCTTTTGATGTTTGAA+AGG | - | chr7_2:69415443-69415462 | Msa1072380:CDS | 30.0% |
| TGTTCCTTTCAAACATCAAA+AGG | + | chr7_2:69415450-69415469 | None:intergenic | 30.0% | |
| ATGATAGAAAACATCAGACT+AGG | + | chr7_2:69416130-69416149 | None:intergenic | 30.0% | |
| AGATATTATTTAACCGACTG+AGG | - | chr7_2:69416167-69416186 | Msa1072380:intron | 30.0% | |
| ! | GGAAGTTGAAGTATTATCTT+CGG | - | chr7_2:69416233-69416252 | Msa1072380:intron | 30.0% |
| GAGACAACAAAAATTGAATG+AGG | - | chr7_2:69416267-69416286 | Msa1072380:intron | 30.0% | |
| ACAACAAAAATTGAATGAGG+AGG | - | chr7_2:69416270-69416289 | Msa1072380:intron | 30.0% | |
| ACTGGATTGTATGTAAAAGA+TGG | + | chr7_2:69416512-69416531 | None:intergenic | 30.0% | |
| AGAAAGAGAAGTTGAAGAAA+AGG | - | chr7_2:69416660-69416679 | Msa1072380:CDS | 30.0% | |
| GCAAGTGAATGTTTGTTCTT+TGG | - | chr7_2:69412098-69412117 | Msa1072380:CDS | 35.0% | |
| AGTGAATGTTTGTTCTTTGG+AGG | - | chr7_2:69412101-69412120 | Msa1072380:CDS | 35.0% | |
| AAGGAAAGGATAGATCTGAT+CGG | - | chr7_2:69412274-69412293 | Msa1072380:intron | 35.0% | |
| CCCTATCGTTTAAATTTCTC+TGG | - | chr7_2:69412307-69412326 | Msa1072380:intron | 35.0% | |
| CCCAGAGAAATTTAAACGAT+AGG | + | chr7_2:69412311-69412330 | None:intergenic | 35.0% | |
| ! | AATTTCTCTGGGAAACTTAC+AGG | - | chr7_2:69412319-69412338 | Msa1072380:intron | 35.0% |
| GGATAGTGCTTGAAATATTG+CGG | - | chr7_2:69412340-69412359 | Msa1072380:intron | 35.0% | |
| !!! | GGTGTTTGTTTTATTGATGC+TGG | - | chr7_2:69412976-69412995 | Msa1072380:intron | 35.0% |
| !!! | GTTTGTTTTATTGATGCTGG+TGG | - | chr7_2:69412979-69412998 | Msa1072380:intron | 35.0% |
| ! | TTTTCTTGACCATGCACATT+AGG | + | chr7_2:69413067-69413086 | None:intergenic | 35.0% |
| ACTGAAACCATCTTTGATGA+CGG | - | chr7_2:69413088-69413107 | Msa1072380:CDS | 35.0% | |
| CAATAAAGATCTGAGTCAGA+AGG | - | chr7_2:69413208-69413227 | Msa1072380:CDS | 35.0% | |
| ATGAAAAGGAGCGAAATTTG+AGG | - | chr7_2:69413309-69413328 | Msa1072380:intron | 35.0% | |
| TGAAGTGTATTGTTATGGAG+TGG | - | chr7_2:69413590-69413609 | Msa1072380:CDS | 35.0% | |
| GAAGTGTATTGTTATGGAGT+GGG | - | chr7_2:69413591-69413610 | Msa1072380:CDS | 35.0% | |
| CTTCCACTCTTTCTTAATTG+TGG | - | chr7_2:69413646-69413665 | Msa1072380:intron | 35.0% | |
| AGTCCACAATTAAGAAAGAG+TGG | + | chr7_2:69413652-69413671 | None:intergenic | 35.0% | |
| !! | AAGTTGGCAATAAGTTGATG+AGG | + | chr7_2:69413757-69413776 | None:intergenic | 35.0% |
| ! | TGATCTTGCATTTTGCATTC+TGG | - | chr7_2:69413795-69413814 | Msa1072380:intron | 35.0% |
| !! | GGTTGTGAATATTTGTTGTG+CGG | - | chr7_2:69413816-69413835 | Msa1072380:intron | 35.0% |
| ATCGACAACCATACTAATGA+AGG | + | chr7_2:69413864-69413883 | None:intergenic | 35.0% | |
| !! | TGGGTTCTAAACAATACAGA+TGG | + | chr7_2:69414107-69414126 | None:intergenic | 35.0% |
| ACCCATTATCTATAAGGTTC+AGG | - | chr7_2:69414122-69414141 | Msa1072380:CDS | 35.0% | |
| CCCTGAACCTTATAGATAAT+GGG | + | chr7_2:69414126-69414145 | None:intergenic | 35.0% | |
| CCCATTATCTATAAGGTTCA+GGG | - | chr7_2:69414123-69414142 | Msa1072380:CDS | 35.0% | |
| CCATTATCTATAAGGTTCAG+GGG | - | chr7_2:69414124-69414143 | Msa1072380:CDS | 35.0% | |
| CATTATCTATAAGGTTCAGG+GGG | - | chr7_2:69414125-69414144 | Msa1072380:CDS | 35.0% | |
| TCGCAATAATACTAACCCAA+AGG | + | chr7_2:69414159-69414178 | None:intergenic | 35.0% | |
| ! | CGGTCTGAAGATTTTATGTT+TGG | - | chr7_2:69414198-69414217 | Msa1072380:intron | 35.0% |
| GATTAATTGCAGGCATCAAA+GGG | - | chr7_2:69414220-69414239 | Msa1072380:intron | 35.0% | |
| ACTTTAAGTGCAAAGTCTGA+GGG | + | chr7_2:69414310-69414329 | None:intergenic | 35.0% | |
| TACTTTAAGTGCAAAGTCTG+AGG | + | chr7_2:69414311-69414330 | None:intergenic | 35.0% | |
| !!! | GTAGCTAACTTTTTAAGTGC+AGG | + | chr7_2:69414421-69414440 | None:intergenic | 35.0% |
| TTAAAAAGTTAGCTACCCTG+AGG | - | chr7_2:69414425-69414444 | Msa1072380:CDS | 35.0% | |
| TAATGTGTACCAGACAATGA+AGG | - | chr7_2:69414560-69414579 | Msa1072380:intron | 35.0% | |
| ACAACGGAAAAATCAGCAAA+AGG | + | chr7_2:69414609-69414628 | None:intergenic | 35.0% | |
| !!! | TTTTGCTGATTTTTCCGTTG+TGG | - | chr7_2:69414608-69414627 | Msa1072380:intron | 35.0% |
| AATAACAATCGAGAGAGTTG+GGG | - | chr7_2:69414819-69414838 | Msa1072380:intron | 35.0% | |
| ! | TGGTTAATTCCCAATTTTGG+TGG | - | chr7_2:69414865-69414884 | Msa1072380:intron | 35.0% |
| CATGCTAAAACCACCAAAAT+TGG | + | chr7_2:69414878-69414897 | None:intergenic | 35.0% | |
| !! | CATTGGTTTGTTGTCAATCT+TGG | - | chr7_2:69414912-69414931 | Msa1072380:intron | 35.0% |
| CAGAATCATTATTCCCAACA+TGG | - | chr7_2:69414940-69414959 | Msa1072380:intron | 35.0% | |
| ! | CTTTACATAAGCACTTGTTG+TGG | - | chr7_2:69415010-69415029 | Msa1072380:intron | 35.0% |
| !! | ATAAGCACTTGTTGTGGTTT+AGG | - | chr7_2:69415016-69415035 | Msa1072380:intron | 35.0% |
| CCATAACATTTGGTAAGATG+AGG | + | chr7_2:69415109-69415128 | None:intergenic | 35.0% | |
| CCTCATCTTACCAAATGTTA+TGG | - | chr7_2:69415106-69415125 | Msa1072380:intron | 35.0% | |
| TTCTGCTGAACAGTTGAATA+AGG | - | chr7_2:69415188-69415207 | Msa1072380:intron | 35.0% | |
| TGAACAGTTGAATAAGGCAA+GGG | - | chr7_2:69415194-69415213 | Msa1072380:intron | 35.0% | |
| AAATGATATCTCCTCCTGAT+AGG | - | chr7_2:69415217-69415236 | Msa1072380:intron | 35.0% | |
| TTTGATTGTTTCCTATCAGG+AGG | + | chr7_2:69415231-69415250 | None:intergenic | 35.0% | |
| AAGGAGAATCTTGTGATCTT+TGG | + | chr7_2:69415292-69415311 | None:intergenic | 35.0% | |
| TCTTGAAAAGCCTCTTGAAA+CGG | - | chr7_2:69415362-69415381 | Msa1072380:intron | 35.0% | |
| TGATGTTTGAAAGGAACAAG+AGG | - | chr7_2:69415452-69415471 | Msa1072380:CDS | 35.0% | |
| CGGTATATAATAATGAGCAG+AGG | - | chr7_2:69415514-69415533 | Msa1072380:CDS | 35.0% | |
| ATGAGCAGAGGATTAATCAA+AGG | - | chr7_2:69415526-69415545 | Msa1072380:CDS | 35.0% | |
| TGAATTTGACTAACCAACTC+AGG | - | chr7_2:69415610-69415629 | Msa1072380:CDS | 35.0% | |
| AGTATGTCTACTTGTGATGT+TGG | - | chr7_2:69415785-69415804 | Msa1072380:intron | 35.0% | |
| ! | GTCTGATGTTTTCTATCATG+TGG | - | chr7_2:69416131-69416150 | Msa1072380:intron | 35.0% |
| ! | GTTGAAGTATTATCTTCGGT+TGG | - | chr7_2:69416237-69416256 | Msa1072380:intron | 35.0% |
| ACTATATCATCTGAAGGGAA+AGG | + | chr7_2:69416349-69416368 | None:intergenic | 35.0% | |
| !! | CATAATCATGACTGTTTTGG+TGG | + | chr7_2:69416421-69416440 | None:intergenic | 35.0% |
| GAAGAATGAAATGCAAAGGA+TGG | + | chr7_2:69416454-69416473 | None:intergenic | 35.0% | |
| CAAAATAGAGGATAGGTTAC+TGG | + | chr7_2:69416530-69416549 | None:intergenic | 35.0% | |
| TCAGAAAGACTTAGTGTGTA+AGG | + | chr7_2:69416930-69416949 | None:intergenic | 35.0% | |
| !! | GAGTTTCTTACTGTTTCTGG+TGG | + | chr7_2:69411726-69411745 | None:intergenic | 40.0% |
| ACGGAGTTTCTTACTGTTTC+TGG | + | chr7_2:69411729-69411748 | None:intergenic | 40.0% | |
| CTTCGAAAAGATACCGATCA+TGG | - | chr7_2:69411968-69411987 | Msa1072380:CDS | 40.0% | |
| ! | CGTGTATTTTCTGCCATGAT+CGG | + | chr7_2:69411984-69412003 | None:intergenic | 40.0% |
| TAGAGTTGTGTGTAGACTTG+CGG | - | chr7_2:69412025-69412044 | Msa1072380:CDS | 40.0% | |
| AAAGGACAGTTTGCAAAGGA+TGG | - | chr7_2:69412048-69412067 | Msa1072380:CDS | 40.0% | |
| AAGGACAGTTTGCAAAGGAT+GGG | - | chr7_2:69412049-69412068 | Msa1072380:CDS | 40.0% | |
| ! | TGTTTGTTCTTTGGAGGATG+TGG | - | chr7_2:69412107-69412126 | Msa1072380:CDS | 40.0% |
| ! | GCTTTTCATTCACCTGTCAA+CGG | - | chr7_2:69412134-69412153 | Msa1072380:CDS | 40.0% |
| ! | AGCTGAAAAAGCATGTAGTC+AGG | - | chr7_2:69412161-69412180 | Msa1072380:CDS | 40.0% |
| ! | AAAAAGCATGTAGTCAGGCT+CGG | - | chr7_2:69412166-69412185 | Msa1072380:CDS | 40.0% |
| CTCTAAGTCATCAACATCGA+GGG | + | chr7_2:69412205-69412224 | None:intergenic | 40.0% | |
| ATGACTTAGAGGCGGATAAA+AGG | - | chr7_2:69412214-69412233 | Msa1072380:intron | 40.0% | |
| TTGATGTGCTATGTCAGTGA+GGG | - | chr7_2:69412249-69412268 | Msa1072380:intron | 40.0% | |
| AGGAAAGGATAGATCTGATC+GGG | - | chr7_2:69412275-69412294 | Msa1072380:intron | 40.0% | |
| AGATACAATGGCAAGCTTTC+AGG | + | chr7_2:69412870-69412889 | None:intergenic | 40.0% | |
| CATGCATGCAAAAAATCGTC+AGG | + | chr7_2:69413009-69413028 | None:intergenic | 40.0% | |
| !!! | ACGATTTTTTGCATGCATGC+AGG | - | chr7_2:69413010-69413029 | Msa1072380:CDS | 40.0% |
| TATACATGGCCTAATGTGCA+TGG | - | chr7_2:69413055-69413074 | Msa1072380:CDS | 40.0% | |
| TAGTAAGCCGTCATCAAAGA+TGG | + | chr7_2:69413098-69413117 | None:intergenic | 40.0% | |
| AGATCTGAGTCAGAAGGATT+TGG | - | chr7_2:69413214-69413233 | Msa1072380:CDS | 40.0% | |
| AAAGGAGCGAAATTTGAGGA+TGG | - | chr7_2:69413313-69413332 | Msa1072380:intron | 40.0% | |
| TTGAGGATGGCTAATCTCAT+TGG | - | chr7_2:69413326-69413345 | Msa1072380:intron | 40.0% | |
| TAAGATGAATAGCGGCAAAG+TGG | - | chr7_2:69413364-69413383 | Msa1072380:intron | 40.0% | |
| CCCCTGAACCTTATAGATAA+TGG | + | chr7_2:69414127-69414146 | None:intergenic | 40.0% | |
| ATCGACAATTGCTTTCGACT+CGG | - | chr7_2:69414178-69414197 | Msa1072380:CDS | 40.0% | |
| GGATTAATTGCAGGCATCAA+AGG | - | chr7_2:69414219-69414238 | Msa1072380:intron | 40.0% | |
| TGACGTGTACTTAAACCTGT+TGG | - | chr7_2:69414517-69414536 | Msa1072380:CDS | 40.0% | |
| CACATTAGAGACCTAGAAGA+GGG | + | chr7_2:69414547-69414566 | None:intergenic | 40.0% | |
| ACACATTAGAGACCTAGAAG+AGG | + | chr7_2:69414548-69414567 | None:intergenic | 40.0% | |
| AGTTCTCAACCTTCATTGTC+TGG | + | chr7_2:69414572-69414591 | None:intergenic | 40.0% | |
| ATGAAGGTTGAGAACTTAGC+TGG | - | chr7_2:69414576-69414595 | Msa1072380:intron | 40.0% | |
| TGAAGGTTGAGAACTTAGCT+GGG | - | chr7_2:69414577-69414596 | Msa1072380:intron | 40.0% | |
| TTAACCATCTCCCCTACAAT+AGG | + | chr7_2:69414852-69414871 | None:intergenic | 40.0% | |
| TGGTTTCTATCAGAGTCTTG+AGG | - | chr7_2:69415137-69415156 | Msa1072380:intron | 40.0% | |
| ATTCAACTGTTCAGCAGAAC+TGG | + | chr7_2:69415187-69415206 | None:intergenic | 40.0% | |
| CTGAACAGTTGAATAAGGCA+AGG | - | chr7_2:69415193-69415212 | Msa1072380:intron | 40.0% | |
| TCTAACAAAGATGGGAGCAA+AGG | + | chr7_2:69415261-69415280 | None:intergenic | 40.0% | |
| TTTGCTCCCATCTTTGTTAG+AGG | - | chr7_2:69415260-69415279 | Msa1072380:CDS | 40.0% | |
| CCACAACCTCTAACAAAGAT+GGG | + | chr7_2:69415269-69415288 | None:intergenic | 40.0% | |
| !! | GTTTCAAGAGGCTTTTCAAG+AGG | + | chr7_2:69415363-69415382 | None:intergenic | 40.0% |
| AACCAGTATACCGTTTCAAG+AGG | + | chr7_2:69415375-69415394 | None:intergenic | 40.0% | |
| TGTTTGAAAGGAACAAGAGG+AGG | - | chr7_2:69415455-69415474 | Msa1072380:CDS | 40.0% | |
| ! | GGAACAAAGGCAGCTTTTAA+CGG | - | chr7_2:69415494-69415513 | Msa1072380:CDS | 40.0% |
| AGCTTCTTCGTGTTCTCTTT+CGG | + | chr7_2:69415568-69415587 | None:intergenic | 40.0% | |
| TTTCTTGTCTCATCCTGAGT+TGG | + | chr7_2:69415626-69415645 | None:intergenic | 40.0% | |
| ACTCAGGATGAGACAAGAAA+TGG | - | chr7_2:69415626-69415645 | Msa1072380:CDS | 40.0% | |
| GTACTAACTGTGTTAGACCA+TGG | - | chr7_2:69415918-69415937 | Msa1072380:CDS | 40.0% | |
| AACAGGAGAGGGAAAAAATG+AGG | - | chr7_2:69416212-69416231 | Msa1072380:intron | 40.0% | |
| ATTGAAGGACTACACTGAAC+TGG | - | chr7_2:69416369-69416388 | Msa1072380:intron | 40.0% | |
| GCTCAGAAAAACCACAAGTT+AGG | + | chr7_2:69416559-69416578 | None:intergenic | 40.0% | |
| AGAGGCTGAGAGAAAAAAGA+AGG | - | chr7_2:69416582-69416601 | Msa1072380:CDS | 40.0% | |
| CTGAGATACTTGAAAAGCAG+AGG | - | chr7_2:69416632-69416651 | Msa1072380:CDS | 40.0% | |
| AAAAGGCTGAGAAGCAAAAG+AGG | - | chr7_2:69416677-69416696 | Msa1072380:CDS | 40.0% | |
| AAAGGCTGAGAAGCAAAAGA+GGG | - | chr7_2:69416678-69416697 | Msa1072380:CDS | 40.0% | |
| !! | CAAAAGAGGGAAGCATTGTT+AGG | - | chr7_2:69416691-69416710 | Msa1072380:CDS | 40.0% |
| AACTTGGGAATGTATTTCCC+TGG | + | chr7_2:69416814-69416833 | None:intergenic | 40.0% | |
| CTGAGACGTTCTTAGATTAC+AGG | - | chr7_2:69416946-69416965 | Msa1072380:intron | 40.0% | |
| !! | TTCTTACTGTTTCTGGTGGC+CGG | + | chr7_2:69411722-69411741 | None:intergenic | 45.0% |
| AACAGTAAGAAACTCCGTCC+TGG | - | chr7_2:69411731-69411750 | Msa1072380:three_prime_UTR | 45.0% | |
| TTGTGTGTAGACTTGCGGAA+AGG | - | chr7_2:69412030-69412049 | Msa1072380:CDS | 45.0% | |
| TTTCAGCTTTCTCCGTTGAC+AGG | + | chr7_2:69412149-69412168 | None:intergenic | 45.0% | |
| ! | AAAAGCATGTAGTCAGGCTC+GGG | - | chr7_2:69412167-69412186 | Msa1072380:CDS | 45.0% |
| CCTCTAAGTCATCAACATCG+AGG | + | chr7_2:69412206-69412225 | None:intergenic | 45.0% | |
| !! | CCTCGATGTTGATGACTTAG+AGG | - | chr7_2:69412203-69412222 | Msa1072380:intron | 45.0% |
| !! | CGATGTTGATGACTTAGAGG+CGG | - | chr7_2:69412206-69412225 | Msa1072380:intron | 45.0% |
| TAGCACATCAACAAGTCCTC+TGG | + | chr7_2:69412240-69412259 | None:intergenic | 45.0% | |
| GTTGATGTGCTATGTCAGTG+AGG | - | chr7_2:69412248-69412267 | Msa1072380:intron | 45.0% | |
| TGATGTGCTATGTCAGTGAG+GGG | - | chr7_2:69412250-69412269 | Msa1072380:intron | 45.0% | |
| CTTTCAGGAGCAGAAAGATC+AGG | + | chr7_2:69412855-69412874 | None:intergenic | 45.0% | |
| TTGCCACCAAACTTGAACTC+TGG | - | chr7_2:69412916-69412935 | Msa1072380:intron | 45.0% | |
| ! | AACCTGCCAGAGTTCAAGTT+TGG | + | chr7_2:69412925-69412944 | None:intergenic | 45.0% |
| AAACTTGAACTCTGGCAGGT+TGG | - | chr7_2:69412924-69412943 | Msa1072380:intron | 45.0% | |
| GTCATCACTTCTTGCTGAAC+TGG | - | chr7_2:69413491-69413510 | Msa1072380:CDS | 45.0% | |
| ATCTATAAGGTTCAGGGGGT+TGG | - | chr7_2:69414129-69414148 | Msa1072380:CDS | 45.0% | |
| TCTATAAGGTTCAGGGGGTT+GGG | - | chr7_2:69414130-69414149 | Msa1072380:CDS | 45.0% | |
| TTGTGTTGCACAAGACGTGA+AGG | - | chr7_2:69414252-69414271 | Msa1072380:intron | 45.0% | |
| TACTGCGACAATTGTACCTC+TGG | + | chr7_2:69414394-69414413 | None:intergenic | 45.0% | |
| TTAGAGACCTAGAAGAGGGA+GGG | + | chr7_2:69414543-69414562 | None:intergenic | 45.0% | |
| ATTAGAGACCTAGAAGAGGG+AGG | + | chr7_2:69414544-69414563 | None:intergenic | 45.0% | |
| !! | AGCACTTGTTGTGGTTTAGG+TGG | - | chr7_2:69415019-69415038 | Msa1072380:intron | 45.0% |
| !! | GCACTTGTTGTGGTTTAGGT+GGG | - | chr7_2:69415020-69415039 | Msa1072380:intron | 45.0% |
| !! | CACTTGTTGTGGTTTAGGTG+GGG | - | chr7_2:69415021-69415040 | Msa1072380:intron | 45.0% |
| GCTGTTTACAGTAGCTCTCA+AGG | - | chr7_2:69415054-69415073 | Msa1072380:intron | 45.0% | |
| ! | GTAAGATGAGGCAGAGTACT+AGG | + | chr7_2:69415097-69415116 | None:intergenic | 45.0% |
| TATCAGAGTCTTGAGGCTGA+TGG | - | chr7_2:69415144-69415163 | Msa1072380:intron | 45.0% | |
| TCTTGAGGCTGATGGCTTAA+GGG | - | chr7_2:69415152-69415171 | Msa1072380:intron | 45.0% | |
| TGATGGCTTAAGGGATCACT+TGG | - | chr7_2:69415161-69415180 | Msa1072380:intron | 45.0% | |
| CCCATCTTTGTTAGAGGTTG+TGG | - | chr7_2:69415266-69415285 | Msa1072380:CDS | 45.0% | |
| GCCACAACCTCTAACAAAGA+TGG | + | chr7_2:69415270-69415289 | None:intergenic | 45.0% | |
| AGCCTCTTGAAACGGTATAC+TGG | - | chr7_2:69415370-69415389 | Msa1072380:intron | 45.0% | |
| TAAAAGCTGCCTTTGTTCCG+CGG | + | chr7_2:69415493-69415512 | None:intergenic | 45.0% | |
| AGCTGAAAGACGTAGACATG+AGG | - | chr7_2:69415584-69415603 | Msa1072380:CDS | 45.0% | |
| ! | TGATATGCCGCTTCGATAAG+CGG | + | chr7_2:69415720-69415739 | None:intergenic | 45.0% |
| GAAGAATCCTCTCTTCCACT+AGG | + | chr7_2:69415749-69415768 | None:intergenic | 45.0% | |
| AAGGTCGTCATTACTGACGA+TGG | + | chr7_2:69416051-69416070 | None:intergenic | 45.0% | |
| TTAACCGACTGAGGAGAGAA+AGG | - | chr7_2:69416176-69416195 | Msa1072380:intron | 45.0% | |
| TAACCGACTGAGGAGAGAAA+GGG | - | chr7_2:69416177-69416196 | Msa1072380:intron | 45.0% | |
| ! | TTTTTCCCTCTCCTGTTTCC+TGG | + | chr7_2:69416209-69416228 | None:intergenic | 45.0% |
| TGAATGAGGAGGAAGAAGCT+CGG | - | chr7_2:69416281-69416300 | Msa1072380:intron | 45.0% | |
| !! | GTGGTTTTTCTGAGCTCTAG+AGG | - | chr7_2:69416564-69416583 | Msa1072380:CDS | 45.0% |
| AGCCAATTTCGCTAAGCGTT+CGG | + | chr7_2:69416614-69416633 | None:intergenic | 45.0% | |
| AATGTATTTCCCTGGAGCTG+GGG | + | chr7_2:69416806-69416825 | None:intergenic | 45.0% | |
| GAATGTATTTCCCTGGAGCT+GGG | + | chr7_2:69416807-69416826 | None:intergenic | 45.0% | |
| TAGATGAGGAAGAGCTCATG+TGG | + | chr7_2:69416857-69416876 | None:intergenic | 45.0% | |
| !! | TAAATAAAATTTCAAAATTA+GGG | - | chr7_2:69414341-69414360 | Msa1072380:CDS | 5.0% |
| GCGGAAAGGACAGTTTGCAA+AGG | - | chr7_2:69412044-69412063 | Msa1072380:CDS | 50.0% | |
| ATGTAGTCAGGCTCGGGAAA+TGG | - | chr7_2:69412173-69412192 | Msa1072380:intron | 50.0% | |
| TGCTATGTCAGTGAGGGGAA+AGG | - | chr7_2:69412255-69412274 | Msa1072380:intron | 50.0% | |
| TGTCAGTGAGGGGAAAGGAA+AGG | - | chr7_2:69412260-69412279 | Msa1072380:intron | 50.0% | |
| GATGAGCTGTCATCTGCACA+TGG | + | chr7_2:69412719-69412738 | None:intergenic | 50.0% | |
| CAGGAGCAGAAAGATCAGGT+CGG | + | chr7_2:69412851-69412870 | None:intergenic | 50.0% | |
| ! | CTGCCAGAGTTCAAGTTTGG+TGG | + | chr7_2:69412922-69412941 | None:intergenic | 50.0% |
| CACCAAACTTGAACTCTGGC+AGG | - | chr7_2:69412920-69412939 | Msa1072380:intron | 50.0% | |
| TTGTCTCTCCACAGCTCTCA+AGG | - | chr7_2:69413469-69413488 | Msa1072380:CDS | 50.0% | |
| AGTGATGACCTTGAGAGCTG+TGG | + | chr7_2:69413480-69413499 | None:intergenic | 50.0% | |
| !! | GTTTGCTTCATCGGTTCCAG+AGG | - | chr7_2:69414375-69414394 | Msa1072380:CDS | 50.0% |
| TACCCTGAGGTTGCTACAAC+AGG | - | chr7_2:69414438-69414457 | Msa1072380:CDS | 50.0% | |
| CACCTGTTGTAGCAACCTCA+GGG | + | chr7_2:69414443-69414462 | None:intergenic | 50.0% | |
| TGGGGTAGCACACCTATTGT+AGG | - | chr7_2:69414837-69414856 | Msa1072380:intron | 50.0% | |
| GGGGTAGCACACCTATTGTA+GGG | - | chr7_2:69414838-69414857 | Msa1072380:intron | 50.0% | |
| GGGTAGCACACCTATTGTAG+GGG | - | chr7_2:69414839-69414858 | Msa1072380:intron | 50.0% | |
| CACACCTATTGTAGGGGAGA+TGG | - | chr7_2:69414845-69414864 | Msa1072380:intron | 50.0% | |
| GTCTTGAGGCTGATGGCTTA+AGG | - | chr7_2:69415151-69415170 | Msa1072380:intron | 50.0% | |
| GGAGGAATCAAAAGAAGCCG+CGG | - | chr7_2:69415473-69415492 | Msa1072380:CDS | 50.0% | |
| CAAAAGAAGCCGCGGAACAA+AGG | - | chr7_2:69415481-69415500 | Msa1072380:CDS | 50.0% | |
| CCTCTTGCTGCATCAAACCA+TGG | + | chr7_2:69415938-69415957 | None:intergenic | 50.0% | |
| CCATGGTTTGATGCAGCAAG+AGG | - | chr7_2:69415935-69415954 | Msa1072380:CDS | 50.0% | |
| TGATGCAGCAAGAGGCTGAA+CGG | - | chr7_2:69415943-69415962 | Msa1072380:CDS | 50.0% | |
| AAGGGAGGAATCCAGGAAAC+AGG | - | chr7_2:69416195-69416214 | Msa1072380:intron | 50.0% | |
| AGGAATCCAGGAAACAGGAG+AGG | - | chr7_2:69416200-69416219 | Msa1072380:intron | 50.0% | |
| GGAATCCAGGAAACAGGAGA+GGG | - | chr7_2:69416201-69416220 | Msa1072380:intron | 50.0% | |
| ! | GAAGAAGCTCGGAAGCATGA+AGG | - | chr7_2:69416292-69416311 | Msa1072380:intron | 50.0% |
| GACCGAACGCTTAGCGAAAT+TGG | - | chr7_2:69416609-69416628 | Msa1072380:CDS | 50.0% | |
| AACCCAACGAACCAGCTTTG+AGG | - | chr7_2:69416716-69416735 | Msa1072380:CDS | 50.0% | |
| GGCTTATAAGGCCTCAAAGC+TGG | + | chr7_2:69416730-69416749 | None:intergenic | 50.0% | |
| GGAATGTATTTCCCTGGAGC+TGG | + | chr7_2:69416808-69416827 | None:intergenic | 50.0% | |
| TACATTCCCAAGTTCCGACG+AGG | - | chr7_2:69416820-69416839 | Msa1072380:five_prime_UTR | 50.0% | |
| TGGTTTAAGCTCCTCCTCGT+CGG | + | chr7_2:69416837-69416856 | None:intergenic | 50.0% | |
| AACTCACCGGAGTTGTTCGC+CGG | - | chr7_2:69411700-69411719 | Msa1072380:three_prime_UTR | 55.0% | |
| AGAGGCGGATAAAAGGCCAG+AGG | - | chr7_2:69412221-69412240 | Msa1072380:intron | 55.0% | |
| TCAGGTCGGTCACGTTGATC+CGG | + | chr7_2:69412837-69412856 | None:intergenic | 55.0% | |
| CTTTCCCTCATTTGCGCTCC+CGG | - | chr7_2:69413394-69413413 | Msa1072380:CDS | 55.0% | |
| ! | ACTACCGGGAGCGCAAATGA+GGG | + | chr7_2:69413401-69413420 | None:intergenic | 55.0% |
| ! | TACTACCGGGAGCGCAAATG+AGG | + | chr7_2:69413402-69413421 | None:intergenic | 55.0% |
| GCACCTGTTGTAGCAACCTC+AGG | + | chr7_2:69414444-69414463 | None:intergenic | 55.0% | |
| GTCTGCTCCGCTTATCGAAG+CGG | - | chr7_2:69415710-69415729 | Msa1072380:CDS | 55.0% | |
| GGCATATCAACAGCGCCTAG+TGG | - | chr7_2:69415731-69415750 | Msa1072380:intron | 55.0% | |
| AACAGCGCCTAGTGGAAGAG+AGG | - | chr7_2:69415739-69415758 | Msa1072380:intron | 55.0% | |
| AAGAGGCTGAACGGAAGGAG+CGG | - | chr7_2:69415952-69415971 | Msa1072380:CDS | 55.0% | |
| GGAAGGAGCGGCTTAGTCAT+AGG | - | chr7_2:69415964-69415983 | Msa1072380:CDS | 55.0% | |
| GGAGCGGCTTAGTCATAGGA+TGG | - | chr7_2:69415968-69415987 | Msa1072380:CDS | 55.0% | |
| CCTCCCTTTCTCTCCTCAGT+CGG | + | chr7_2:69416183-69416202 | None:intergenic | 55.0% | |
| GGAGAGAAAGGGAGGAATCC+AGG | - | chr7_2:69416188-69416207 | Msa1072380:intron | 55.0% | |
| !! | GGCCTCAAAGCTGGTTCGTT+GGG | + | chr7_2:69416721-69416740 | None:intergenic | 55.0% |
| !! | AGGCCTCAAAGCTGGTTCGT+TGG | + | chr7_2:69416722-69416741 | None:intergenic | 55.0% |
| AGCAGACTCCAATGGACGAC+GGG | + | chr7_2:69416758-69416777 | None:intergenic | 55.0% | |
| GAGCAGACTCCAATGGACGA+CGG | + | chr7_2:69416759-69416778 | None:intergenic | 55.0% | |
| ATTCCCAAGTTCCGACGAGG+AGG | - | chr7_2:69416823-69416842 | Msa1072380:five_prime_UTR | 55.0% | |
| TCAGGGGGTTGGGTGACCTT+TGG | - | chr7_2:69414140-69414159 | Msa1072380:CDS | 60.0% | |
| CAGGGGGTTGGGTGACCTTT+GGG | - | chr7_2:69414141-69414160 | Msa1072380:CDS | 60.0% | |
| CTAGAAGAGGGAGGGCCAAC+AGG | + | chr7_2:69414535-69414554 | None:intergenic | 60.0% | |
| CTGTTGGCCCTCCCTCTTCT+AGG | - | chr7_2:69414533-69414552 | Msa1072380:intron | 60.0% | |
| GCAGCAAGAGGCTGAACGGA+AGG | - | chr7_2:69415947-69415966 | Msa1072380:CDS | 60.0% | |
| CCGACTGAGGAGAGAAAGGG+AGG | - | chr7_2:69416180-69416199 | Msa1072380:intron | 60.0% | |
| CGACGGGCAGGAGGCTTATA+AGG | + | chr7_2:69416742-69416761 | None:intergenic | 60.0% | |
| GCAGCAGGAGCAGACTCCAA+TGG | + | chr7_2:69416766-69416785 | None:intergenic | 60.0% | |
| GAGGAAGTTGCAGGTGCAGC+AGG | + | chr7_2:69416781-69416800 | None:intergenic | 60.0% | |
| GCTCCTCCTCGTCGGAACTT+GGG | + | chr7_2:69416829-69416848 | None:intergenic | 60.0% | |
| AGCTCCTCCTCGTCGGAACT+TGG | + | chr7_2:69416830-69416849 | None:intergenic | 60.0% | |
| TGGTGGCCGGCGAACAACTC+CGG | + | chr7_2:69411709-69411728 | None:intergenic | 65.0% | |
| TCCAATGGACGACGGGCAGG+AGG | + | chr7_2:69416751-69416770 | None:intergenic | 65.0% | |
| GACTCCAATGGACGACGGGC+AGG | + | chr7_2:69416754-69416773 | None:intergenic | 65.0% | |
| GCTGGGGCTGAGGAAGTTGC+AGG | + | chr7_2:69416790-69416809 | None:intergenic | 65.0% | |
| ACTTCCTCAGCCCCAGCTCC+AGG | - | chr7_2:69416793-69416812 | Msa1072380:five_prime_UTR | 65.0% | |
| CTTCCTCAGCCCCAGCTCCA+GGG | - | chr7_2:69416794-69416813 | Msa1072380:five_prime_UTR | 65.0% | |
| TTTCCCTGGAGCTGGGGCTG+AGG | + | chr7_2:69416800-69416819 | None:intergenic | 65.0% | |
| GCCTCCTGCCCGTCGTCCAT+TGG | - | chr7_2:69416747-69416766 | Msa1072380:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 69411696 | 69417075 | 69411696 | ID=Msa1072380;Name=Msa1072380 |
| chr7_2 | mRNA | 69411696 | 69417075 | 69411696 | ID=Msa1072380-mRNA-1;Parent=Msa1072380;Name=Msa1072380-mRNA-1;_AED=0.06;_eAED=0.06;_QI=209|0.81|0.66|1|0.90|0.83|12|223|814 |
| chr7_2 | exon | 69411696 | 69412187 | 69411696 | ID=Msa1072380-mRNA-1:exon:15429;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69412458 | 69412605 | 69412458 | ID=Msa1072380-mRNA-1:exon:15428;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69412719 | 69412820 | 69412719 | ID=Msa1072380-mRNA-1:exon:15427;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69412986 | 69413306 | 69412986 | ID=Msa1072380-mRNA-1:exon:15426;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69413388 | 69413621 | 69413388 | ID=Msa1072380-mRNA-1:exon:15425;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69414055 | 69414216 | 69414055 | ID=Msa1072380-mRNA-1:exon:15424;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69414312 | 69414539 | 69414312 | ID=Msa1072380-mRNA-1:exon:15423;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69415259 | 69415288 | 69415259 | ID=Msa1072380-mRNA-1:exon:15422;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69415386 | 69415739 | 69415386 | ID=Msa1072380-mRNA-1:exon:15421;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69415830 | 69416045 | 69415830 | ID=Msa1072380-mRNA-1:exon:15420;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69416379 | 69416925 | 69416379 | ID=Msa1072380-mRNA-1:exon:15419;Parent=Msa1072380-mRNA-1 |
| chr7_2 | exon | 69417033 | 69417075 | 69417033 | ID=Msa1072380-mRNA-1:exon:15418;Parent=Msa1072380-mRNA-1 |
| chr7_2 | five_prime_UTR | 69417033 | 69417075 | 69417033 | ID=Msa1072380-mRNA-1:five_prime_utr;Parent=Msa1072380-mRNA-1 |
| chr7_2 | five_prime_UTR | 69416760 | 69416925 | 69416760 | ID=Msa1072380-mRNA-1:five_prime_utr;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69416379 | 69416759 | 69416379 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69415830 | 69416045 | 69415830 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69415386 | 69415739 | 69415386 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69415259 | 69415288 | 69415259 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69414312 | 69414539 | 69414312 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69414055 | 69414216 | 69414055 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69413388 | 69413621 | 69413388 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69412986 | 69413306 | 69412986 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69412719 | 69412820 | 69412719 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69412458 | 69412605 | 69412458 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | CDS | 69411919 | 69412187 | 69411919 | ID=Msa1072380-mRNA-1:cds;Parent=Msa1072380-mRNA-1 |
| chr7_2 | three_prime_UTR | 69411696 | 69411918 | 69411696 | ID=Msa1072380-mRNA-1:three_prime_utr;Parent=Msa1072380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
