Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033810 | XP_003625059.1 | 97.065 | 477 | 7 | 1 | 1 | 470 | 1 | 477 | 0.0 | 963 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033810 | sp|Q84KI6|SQD1_SPIOL | 74.327 | 483 | 110 | 3 | 1 | 470 | 1 | 482 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033810 | G7KRQ8 | 97.065 | 477 | 7 | 1 | 1 | 470 | 1 | 477 | 0.0 | 963 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1033790 | Msa1033810 | 0.889896 | 1.606344e-73 | -8.615850e-47 |
| Msa1033810 | Msa1073670 | 0.895256 | 1.139062e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033810 | MtrunA17_Chr7g0256731 | 97.065 | 477 | 7 | 1 | 1 | 470 | 1 | 477 | 0.0 | 963 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033810 | AT4G33030.1 | 75.676 | 481 | 102 | 5 | 1 | 470 | 1 | 477 | 0.0 | 725 |
Find 116 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACTATGATGCAATATT+TGG | 0.140392 | 7_1:+69073630 | Msa1033810:CDS |
| CTGATGCTGTTGTCCATTTC+GGG | 0.173565 | 7_1:+69073214 | Msa1033810:CDS |
| ATTACTCGCTTCGGTTTAAA+AGG | 0.187741 | 7_1:-69072934 | None:intergenic |
| CCTTCCTCAATATCAATATT+TGG | 0.201469 | 7_1:-69073396 | None:intergenic |
| CCTGATGCTGTTGTCCATTT+CGG | 0.263402 | 7_1:+69073213 | Msa1033810:CDS |
| CTGAATCAAGGAGTGGTATA+TGG | 0.263921 | 7_1:+69073561 | Msa1033810:CDS |
| CGCAAGAAAAGCCGTCTAAA+TGG | 0.286049 | 7_1:-69072820 | None:intergenic |
| AGCTTTCACTTGCAAAGCTT+GGG | 0.304992 | 7_1:+69073521 | Msa1033810:CDS |
| TAGTTTGAACCGGGGCTTCC+TGG | 0.305214 | 7_1:-69072900 | None:intergenic |
| AAATTATGCCTGGTGTTTCT+TGG | 0.333741 | 7_1:+69074106 | Msa1033810:CDS |
| TGCAAGTGAAAGCTATGTTA+TGG | 0.335168 | 7_1:-69073512 | None:intergenic |
| GTGTTTCTTGGAGAAAGGTT+GGG | 0.344780 | 7_1:+69074118 | Msa1033810:CDS |
| TGCATGAAGAGTTGTGTAAC+AGG | 0.360759 | 7_1:+69073607 | Msa1033810:CDS |
| TGATTCACTGCTTAACTTTG+CGG | 0.361307 | 7_1:+69074053 | Msa1033810:CDS |
| GCCCCGGTTCAAACTAGTTC+TGG | 0.371819 | 7_1:+69072907 | Msa1033810:CDS |
| CTCATAGGACTTGAAGGTTT+CGG | 0.374096 | 7_1:-69073190 | None:intergenic |
| CGATCCTGGATGGAGGAAAT+TGG | 0.387488 | 7_1:-69073090 | None:intergenic |
| TAGCCCTAGAGTGGAGTTAG+AGG | 0.392922 | 7_1:+69073954 | Msa1033810:CDS |
| GCAAGTGAAAGCTATGTTAT+GGG | 0.394552 | 7_1:-69073511 | None:intergenic |
| AACACTAAACTAGTTGATCT+TGG | 0.398824 | 7_1:+69073997 | Msa1033810:CDS |
| TAAAATGAGCTAGCTTGCTT+TGG | 0.399512 | 7_1:-69073465 | None:intergenic |
| TCCAACACTGAATGCGATCC+TGG | 0.403609 | 7_1:-69073104 | None:intergenic |
| GGTGTTTCTTGGAGAAAGGT+TGG | 0.408948 | 7_1:+69074117 | Msa1033810:CDS |
| TAGCTTTCACTTGCAAAGCT+TGG | 0.414968 | 7_1:+69073520 | Msa1033810:CDS |
| ATTGAATCGGTTCTGTGTTC+AGG | 0.420146 | 7_1:+69073659 | Msa1033810:CDS |
| CCGAAATGGACAACAGCATC+AGG | 0.432925 | 7_1:-69073213 | None:intergenic |
| TTGAAGACTCTGAACTCTCC+AGG | 0.434551 | 7_1:-69073835 | None:intergenic |
| TACGAAAGCTGGCGAGAAGT+TGG | 0.440566 | 7_1:+69073903 | Msa1033810:CDS |
| ACAGAAACCAAGGAAAAGTT+TGG | 0.443218 | 7_1:+69072846 | Msa1033810:CDS |
| ATCAGGCTCATAGGACTTGA+AGG | 0.444397 | 7_1:-69073196 | None:intergenic |
| TGAATCAAGGAGTGGTATAT+GGG | 0.446459 | 7_1:+69073562 | Msa1033810:CDS |
| TCTAGGGCTAGGCACTGATA+TGG | 0.447809 | 7_1:-69073941 | None:intergenic |
| CTGAACTCTCCAGGGTTAGC+CGG | 0.447834 | 7_1:-69073826 | None:intergenic |
| CTAGTCAAGCTTGGGACAAT+GGG | 0.448728 | 7_1:+69073360 | Msa1033810:CDS |
| TTCTGTGTTCAGGCTGCTGT+TGG | 0.451203 | 7_1:+69073669 | Msa1033810:CDS |
| CCTCGTAACCTTTGTTAGAA+AGG | 0.451936 | 7_1:-69073002 | None:intergenic |
| CCAATGACCATTACTCGCTT+CGG | 0.452722 | 7_1:-69072943 | None:intergenic |
| GATGTTGAGCATTGGTGAAA+AGG | 0.453224 | 7_1:-69072760 | None:intergenic |
| TGTTTCTTGGAGAAAGGTTG+GGG | 0.454574 | 7_1:+69074119 | Msa1033810:CDS |
| GCCTGGTGTTTCTTGGAGAA+AGG | 0.462195 | 7_1:+69074113 | Msa1033810:CDS |
| ACGAAAGCTGGCGAGAAGTT+GGG | 0.464218 | 7_1:+69073904 | Msa1033810:CDS |
| TCGCCAGAACTAGTTTGAAC+CGG | 0.465526 | 7_1:-69072910 | None:intergenic |
| TTCTACAGTTTCAACTGGCC+AGG | 0.466150 | 7_1:+69072882 | Msa1033810:CDS |
| CTTGGGACAATGGGTGAATA+CGG | 0.477903 | 7_1:+69073369 | Msa1033810:CDS |
| AATGCTTCTACAGTTTCAAC+TGG | 0.486284 | 7_1:+69072877 | Msa1033810:CDS |
| CAGTGTTGGAAATCTCTCAC+TGG | 0.491751 | 7_1:+69073117 | Msa1033810:CDS |
| TATTTGGAACTGCATTGAAT+CGG | 0.493431 | 7_1:+69073646 | Msa1033810:CDS |
| GACAACAGCATCAGGCTCAT+AGG | 0.494062 | 7_1:-69073205 | None:intergenic |
| GCTGAACTTGTTACGAAAGC+TGG | 0.498584 | 7_1:+69073892 | Msa1033810:CDS |
| TGAACTCTCCAGGGTTAGCC+GGG | 0.498798 | 7_1:-69073825 | None:intergenic |
| CCGAAGCGAGTAATGGTCAT+TGG | 0.499010 | 7_1:+69072943 | Msa1033810:CDS |
| CACAGCAAAACAATGTTGTC+GGG | 0.499040 | 7_1:+69073289 | Msa1033810:CDS |
| CACACCAATTTCCTCCATCC+AGG | 0.500313 | 7_1:+69073086 | Msa1033810:CDS |
| CGCCAGAACTAGTTTGAACC+GGG | 0.501193 | 7_1:-69072909 | None:intergenic |
| AACCTTTGTTAGAAAGGTGG+AGG | 0.503426 | 7_1:-69072996 | None:intergenic |
| GAGCTAGCTTGCTTTGGATA+CGG | 0.506316 | 7_1:-69073459 | None:intergenic |
| TTGCGGTTCAGTACAAAGAC+CGG | 0.508555 | 7_1:+69074070 | Msa1033810:CDS |
| ATTGTCATCTAGTCAAGCTT+GGG | 0.509144 | 7_1:+69073352 | Msa1033810:CDS |
| CCAAATATTGATATTGAGGA+AGG | 0.509151 | 7_1:+69073396 | Msa1033810:CDS |
| GACCGGTCTATCATAGAGTA+AGG | 0.509269 | 7_1:-69073252 | None:intergenic |
| AACTCCAAATATTGATATTG+AGG | 0.510539 | 7_1:+69073392 | Msa1033810:CDS |
| GTAATGGTCATTGGTGGAGA+TGG | 0.511804 | 7_1:+69072952 | Msa1033810:CDS |
| TCTAGTCAAGCTTGGGACAA+TGG | 0.511865 | 7_1:+69073359 | Msa1033810:CDS |
| GATTGTCATCTAGTCAAGCT+TGG | 0.511909 | 7_1:+69073351 | Msa1033810:CDS |
| TGAGCTTGCCATTGCAAACC+CGG | 0.515121 | 7_1:+69073807 | Msa1033810:CDS |
| TTCAACTGGCCAGGAAGCCC+CGG | 0.518120 | 7_1:+69072891 | Msa1033810:CDS |
| CTCCTTACTCTATGATAGAC+CGG | 0.525170 | 7_1:+69073250 | Msa1033810:CDS |
| TTACTCGCTTCGGTTTAAAA+GGG | 0.531134 | 7_1:-69072933 | None:intergenic |
| TGCTCCTCTAACTCCACTCT+AGG | 0.532066 | 7_1:-69073958 | None:intergenic |
| ATTGCAAACCCGGCTAACCC+TGG | 0.532722 | 7_1:+69073817 | Msa1033810:CDS |
| GTGTATACACAGCTCTTGAC+CGG | 0.533184 | 7_1:-69073269 | None:intergenic |
| ACACAGCAAAACAATGTTGT+CGG | 0.535211 | 7_1:+69073288 | Msa1033810:CDS |
| CGGGCAACTGATCTGAATCA+AGG | 0.540528 | 7_1:+69073549 | Msa1033810:CDS |
| TGGAGATGGATACTGTGGTT+GGG | 0.542951 | 7_1:+69072966 | Msa1033810:CDS |
| GACACTAAGCAAATTATGCC+TGG | 0.547893 | 7_1:+69074096 | Msa1033810:CDS |
| TAAACAAGGTTTGTTTGAAG+CGG | 0.550343 | 7_1:-69072734 | None:intergenic |
| GCTTTCACTTGCAAAGCTTG+GGG | 0.550528 | 7_1:+69073522 | Msa1033810:CDS |
| GTGGAGATGGATACTGTGGT+TGG | 0.563462 | 7_1:+69072965 | Msa1033810:CDS |
| ACACTGAATGCGATCCTGGA+TGG | 0.563966 | 7_1:-69073100 | None:intergenic |
| GCTCCTCTAACTCCACTCTA+GGG | 0.566419 | 7_1:-69073957 | None:intergenic |
| TCCAGGATCGCATTCAGTGT+TGG | 0.567073 | 7_1:+69073103 | Msa1033810:CDS |
| TGTCCTTCCGTTGTGAGTGA+TGG | 0.571830 | 7_1:-69073427 | None:intergenic |
| AGGGTTAGCCGGGTTTGCAA+TGG | 0.573221 | 7_1:-69073815 | None:intergenic |
| CGTAACCTTTGTTAGAAAGG+TGG | 0.578750 | 7_1:-69072999 | None:intergenic |
| ATCAGTGCCTAGCCCTAGAG+TGG | 0.579733 | 7_1:+69073945 | Msa1033810:CDS |
| AAAAGTATTGAGCTATACAT+TGG | 0.580925 | 7_1:+69073141 | Msa1033810:CDS |
| TAGAAAATGATGTTGAGCAT+TGG | 0.583068 | 7_1:-69072768 | None:intergenic |
| AAGCGAGTAATGGTCATTGG+TGG | 0.585308 | 7_1:+69072946 | Msa1033810:CDS |
| AGTGTTGGAAATCTCTCACT+GGG | 0.586597 | 7_1:+69073118 | Msa1033810:CDS |
| CCTTTCTAACAAAGGTTACG+AGG | 0.587127 | 7_1:+69073002 | Msa1033810:CDS |
| CCTATACCATATACAGTGAG+TGG | 0.594076 | 7_1:-69073696 | None:intergenic |
| GTTTGAAGCGGAGAAAGTCA+AGG | 0.597796 | 7_1:-69072722 | None:intergenic |
| CTTTCACTTGCAAAGCTTGG+GGG | 0.598323 | 7_1:+69073523 | Msa1033810:CDS |
| TCTAACTCCACTCTAGGGCT+AGG | 0.599277 | 7_1:-69073952 | None:intergenic |
| TGAGAGAATCTAGTCCAAGC+TGG | 0.600491 | 7_1:-69073065 | None:intergenic |
| GCCCTCCACCTTTCTAACAA+AGG | 0.602875 | 7_1:+69072994 | Msa1033810:CDS |
| ACCTTTGTTAGAAAGGTGGA+GGG | 0.612052 | 7_1:-69072995 | None:intergenic |
| AGAGAATCTGAAAGAAAGTG+TGG | 0.612228 | 7_1:-69074027 | None:intergenic |
| TCGAACAAGGTTGTCAACAA+TGG | 0.614328 | 7_1:-69073028 | None:intergenic |
| GAACTGTATCACTTATGTCA+AGG | 0.615118 | 7_1:-69073777 | None:intergenic |
| TGAAGACTCTGAACTCTCCA+GGG | 0.617358 | 7_1:-69073834 | None:intergenic |
| TGATGCTGTTGTCCATTTCG+GGG | 0.617432 | 7_1:+69073215 | Msa1033810:CDS |
| TTACCATCACTCACAACGGA+AGG | 0.617927 | 7_1:+69073424 | Msa1033810:CDS |
| CTGAATGCGATCCTGGATGG+AGG | 0.618262 | 7_1:-69073097 | None:intergenic |
| TGCGGTTCAGTACAAAGACC+GGG | 0.625601 | 7_1:+69074071 | Msa1033810:CDS |
| TGTATCACTTATGTCAAGGA+AGG | 0.625748 | 7_1:-69073773 | None:intergenic |
| ACCTTTCTCCAAGAAACACC+AGG | 0.645278 | 7_1:-69074114 | None:intergenic |
| TCTTGCGTGAACAGAAACCA+AGG | 0.650022 | 7_1:+69072836 | Msa1033810:CDS |
| TAATTTGCTTAGTGTCAACC+CGG | 0.652985 | 7_1:-69074089 | None:intergenic |
| GTCTATCATAGAGTAAGGAG+CGG | 0.663083 | 7_1:-69073247 | None:intergenic |
| GAATCAAGGAGTGGTATATG+GGG | 0.664294 | 7_1:+69073563 | Msa1033810:CDS |
| AACTGATCTGAATCAAGGAG+TGG | 0.668884 | 7_1:+69073554 | Msa1033810:CDS |
| ATTGGTGGAGATGGATACTG+TGG | 0.674313 | 7_1:+69072961 | Msa1033810:CDS |
| TATATTACCATCACTCACAA+CGG | 0.680492 | 7_1:+69073420 | Msa1033810:CDS |
| GCCAGAACTAGTTTGAACCG+GGG | 0.700751 | 7_1:-69072908 | None:intergenic |
| TGCTATAAAAGAGTACAGAG+AGG | 0.711022 | 7_1:+69073329 | Msa1033810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGTATTGAGCTATACAT+TGG | + | chr7_1:69073141-69073160 | Msa1033810:CDS | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | + | chr7_1:69073392-69073411 | Msa1033810:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | + | chr7_1:69073479-69073498 | Msa1033810:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | + | chr7_1:69073630-69073649 | Msa1033810:CDS | 25.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | + | chr7_1:69073141-69073160 | Msa1033810:CDS | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | + | chr7_1:69073392-69073411 | Msa1033810:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | + | chr7_1:69073479-69073498 | Msa1033810:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | + | chr7_1:69073630-69073649 | Msa1033810:CDS | 25.0% |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | - | chr7_1:69072737-69072756 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | - | chr7_1:69072751-69072770 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | - | chr7_1:69072771-69072790 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | + | chr7_1:69072774-69072793 | Msa1033810:CDS | 30.0% |
| ACTCCAAAAATCCATTTAGA+CGG | + | chr7_1:69072809-69072828 | Msa1033810:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | - | chr7_1:69073399-69073418 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | + | chr7_1:69073396-69073415 | Msa1033810:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | + | chr7_1:69073420-69073439 | Msa1033810:CDS | 30.0% | |
| ! | TATTTGGAACTGCATTGAAT+CGG | + | chr7_1:69073646-69073665 | Msa1033810:CDS | 30.0% |
| AACACTAAACTAGTTGATCT+TGG | + | chr7_1:69073997-69074016 | Msa1033810:CDS | 30.0% | |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | - | chr7_1:69072737-69072756 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | - | chr7_1:69072751-69072770 | None:intergenic | 30.0% |
| TAGAAAATGATGTTGAGCAT+TGG | - | chr7_1:69072771-69072790 | None:intergenic | 30.0% | |
| ! | CTCAACATCATTTTCTAACA+CGG | + | chr7_1:69072774-69072793 | Msa1033810:CDS | 30.0% |
| ACTCCAAAAATCCATTTAGA+CGG | + | chr7_1:69072809-69072828 | Msa1033810:CDS | 30.0% | |
| CCTTCCTCAATATCAATATT+TGG | - | chr7_1:69073399-69073418 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | + | chr7_1:69073396-69073415 | Msa1033810:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | + | chr7_1:69073420-69073439 | Msa1033810:CDS | 30.0% | |
| ! | TATTTGGAACTGCATTGAAT+CGG | + | chr7_1:69073646-69073665 | Msa1033810:CDS | 30.0% |
| AACACTAAACTAGTTGATCT+TGG | + | chr7_1:69073997-69074016 | Msa1033810:CDS | 30.0% | |
| !! | AAGCCGTCTAAATGGATTTT+TGG | - | chr7_1:69072815-69072834 | None:intergenic | 35.0% |
| ACAGAAACCAAGGAAAAGTT+TGG | + | chr7_1:69072846-69072865 | Msa1033810:CDS | 35.0% | |
| AATGCTTCTACAGTTTCAAC+TGG | + | chr7_1:69072877-69072896 | Msa1033810:CDS | 35.0% | |
| TTACTCGCTTCGGTTTAAAA+GGG | - | chr7_1:69072936-69072955 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | - | chr7_1:69072937-69072956 | None:intergenic | 35.0% | |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | + | chr7_1:69072936-69072955 | Msa1033810:CDS | 35.0% |
| ACACAGCAAAACAATGTTGT+CGG | + | chr7_1:69073288-69073307 | Msa1033810:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | + | chr7_1:69073329-69073348 | Msa1033810:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | + | chr7_1:69073352-69073371 | Msa1033810:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | - | chr7_1:69073468-69073487 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | - | chr7_1:69073514-69073533 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | - | chr7_1:69073515-69073534 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | + | chr7_1:69073562-69073581 | Msa1033810:CDS | 35.0% | |
| AGTAACATGCAAATATTGCC+TGG | - | chr7_1:69073725-69073744 | None:intergenic | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | + | chr7_1:69073749-69073768 | Msa1033810:intron | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | + | chr7_1:69073750-69073769 | Msa1033810:intron | 35.0% | |
| TGTATCACTTATGTCAAGGA+AGG | - | chr7_1:69073776-69073795 | None:intergenic | 35.0% | |
| GAACTGTATCACTTATGTCA+AGG | - | chr7_1:69073780-69073799 | None:intergenic | 35.0% | |
| ! | CTGATATGGTTTTCACATCA+AGG | - | chr7_1:69073930-69073949 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | - | chr7_1:69074030-69074049 | None:intergenic | 35.0% | |
| TGATTCACTGCTTAACTTTG+CGG | + | chr7_1:69074053-69074072 | Msa1033810:CDS | 35.0% | |
| !! | TAATTTGCTTAGTGTCAACC+CGG | - | chr7_1:69074092-69074111 | None:intergenic | 35.0% |
| AAATTATGCCTGGTGTTTCT+TGG | + | chr7_1:69074106-69074125 | Msa1033810:CDS | 35.0% | |
| !! | AAGCCGTCTAAATGGATTTT+TGG | - | chr7_1:69072815-69072834 | None:intergenic | 35.0% |
| ACAGAAACCAAGGAAAAGTT+TGG | + | chr7_1:69072846-69072865 | Msa1033810:CDS | 35.0% | |
| AATGCTTCTACAGTTTCAAC+TGG | + | chr7_1:69072877-69072896 | Msa1033810:CDS | 35.0% | |
| TTACTCGCTTCGGTTTAAAA+GGG | - | chr7_1:69072936-69072955 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | - | chr7_1:69072937-69072956 | None:intergenic | 35.0% | |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | + | chr7_1:69072936-69072955 | Msa1033810:CDS | 35.0% |
| ACACAGCAAAACAATGTTGT+CGG | + | chr7_1:69073288-69073307 | Msa1033810:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | + | chr7_1:69073329-69073348 | Msa1033810:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | + | chr7_1:69073352-69073371 | Msa1033810:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | - | chr7_1:69073468-69073487 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | - | chr7_1:69073514-69073533 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | - | chr7_1:69073515-69073534 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | + | chr7_1:69073562-69073581 | Msa1033810:CDS | 35.0% | |
| AGTAACATGCAAATATTGCC+TGG | - | chr7_1:69073725-69073744 | None:intergenic | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | + | chr7_1:69073749-69073768 | Msa1033810:intron | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | + | chr7_1:69073750-69073769 | Msa1033810:intron | 35.0% | |
| TGTATCACTTATGTCAAGGA+AGG | - | chr7_1:69073776-69073795 | None:intergenic | 35.0% | |
| GAACTGTATCACTTATGTCA+AGG | - | chr7_1:69073780-69073799 | None:intergenic | 35.0% | |
| ! | CTGATATGGTTTTCACATCA+AGG | - | chr7_1:69073930-69073949 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | - | chr7_1:69074030-69074049 | None:intergenic | 35.0% | |
| TGATTCACTGCTTAACTTTG+CGG | + | chr7_1:69074053-69074072 | Msa1033810:CDS | 35.0% | |
| !! | TAATTTGCTTAGTGTCAACC+CGG | - | chr7_1:69074092-69074111 | None:intergenic | 35.0% |
| AAATTATGCCTGGTGTTTCT+TGG | + | chr7_1:69074106-69074125 | Msa1033810:CDS | 35.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | - | chr7_1:69072763-69072782 | None:intergenic | 40.0% |
| ! | ACAACTGCCAAACTTTTCCT+TGG | - | chr7_1:69072856-69072875 | None:intergenic | 40.0% |
| ACCTTTGTTAGAAAGGTGGA+GGG | - | chr7_1:69072998-69073017 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | - | chr7_1:69072999-69073018 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | - | chr7_1:69073002-69073021 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | - | chr7_1:69073005-69073024 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | + | chr7_1:69073002-69073021 | Msa1033810:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | - | chr7_1:69073031-69073050 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | - | chr7_1:69073044-69073063 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAAATCTCTCACT+GGG | + | chr7_1:69073118-69073137 | Msa1033810:CDS | 40.0% |
| CTCATAGGACTTGAAGGTTT+CGG | - | chr7_1:69073193-69073212 | None:intergenic | 40.0% | |
| GTCTATCATAGAGTAAGGAG+CGG | - | chr7_1:69073250-69073269 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | + | chr7_1:69073250-69073269 | Msa1033810:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | + | chr7_1:69073289-69073308 | Msa1033810:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | + | chr7_1:69073351-69073370 | Msa1033810:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | + | chr7_1:69073520-69073539 | Msa1033810:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | + | chr7_1:69073521-69073540 | Msa1033810:CDS | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | + | chr7_1:69073554-69073573 | Msa1033810:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | + | chr7_1:69073561-69073580 | Msa1033810:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | + | chr7_1:69073563-69073582 | Msa1033810:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | + | chr7_1:69073607-69073626 | Msa1033810:CDS | 40.0% | |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | + | chr7_1:69073659-69073678 | Msa1033810:CDS | 40.0% |
| CCTATACCATATACAGTGAG+TGG | - | chr7_1:69073699-69073718 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAT+AGG | + | chr7_1:69073696-69073715 | Msa1033810:intron | 40.0% | |
| CTCACTGTATATGGTATAGG+AGG | + | chr7_1:69073699-69073718 | Msa1033810:intron | 40.0% | |
| GACACTAAGCAAATTATGCC+TGG | + | chr7_1:69074096-69074115 | Msa1033810:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | + | chr7_1:69074118-69074137 | Msa1033810:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | + | chr7_1:69074119-69074138 | Msa1033810:CDS | 40.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | - | chr7_1:69072763-69072782 | None:intergenic | 40.0% |
| ! | ACAACTGCCAAACTTTTCCT+TGG | - | chr7_1:69072856-69072875 | None:intergenic | 40.0% |
| ACCTTTGTTAGAAAGGTGGA+GGG | - | chr7_1:69072998-69073017 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | - | chr7_1:69072999-69073018 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | - | chr7_1:69073002-69073021 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | - | chr7_1:69073005-69073024 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | + | chr7_1:69073002-69073021 | Msa1033810:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | - | chr7_1:69073031-69073050 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | - | chr7_1:69073044-69073063 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAAATCTCTCACT+GGG | + | chr7_1:69073118-69073137 | Msa1033810:CDS | 40.0% |
| CTCATAGGACTTGAAGGTTT+CGG | - | chr7_1:69073193-69073212 | None:intergenic | 40.0% | |
| GTCTATCATAGAGTAAGGAG+CGG | - | chr7_1:69073250-69073269 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | + | chr7_1:69073250-69073269 | Msa1033810:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | + | chr7_1:69073289-69073308 | Msa1033810:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | + | chr7_1:69073351-69073370 | Msa1033810:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | + | chr7_1:69073520-69073539 | Msa1033810:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | + | chr7_1:69073521-69073540 | Msa1033810:CDS | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | + | chr7_1:69073554-69073573 | Msa1033810:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | + | chr7_1:69073561-69073580 | Msa1033810:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | + | chr7_1:69073563-69073582 | Msa1033810:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | + | chr7_1:69073607-69073626 | Msa1033810:CDS | 40.0% | |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | + | chr7_1:69073659-69073678 | Msa1033810:CDS | 40.0% |
| CCTATACCATATACAGTGAG+TGG | - | chr7_1:69073699-69073718 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAT+AGG | + | chr7_1:69073696-69073715 | Msa1033810:intron | 40.0% | |
| CTCACTGTATATGGTATAGG+AGG | + | chr7_1:69073699-69073718 | Msa1033810:intron | 40.0% | |
| GACACTAAGCAAATTATGCC+TGG | + | chr7_1:69074096-69074115 | Msa1033810:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | + | chr7_1:69074118-69074137 | Msa1033810:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | + | chr7_1:69074119-69074138 | Msa1033810:CDS | 40.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | - | chr7_1:69072725-69072744 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | - | chr7_1:69072823-69072842 | None:intergenic | 45.0% | |
| TCTTGCGTGAACAGAAACCA+AGG | + | chr7_1:69072836-69072855 | Msa1033810:CDS | 45.0% | |
| TTCTACAGTTTCAACTGGCC+AGG | + | chr7_1:69072882-69072901 | Msa1033810:CDS | 45.0% | |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | - | chr7_1:69072913-69072932 | None:intergenic | 45.0% |
| CCAATGACCATTACTCGCTT+CGG | - | chr7_1:69072946-69072965 | None:intergenic | 45.0% | |
| AAGCGAGTAATGGTCATTGG+TGG | + | chr7_1:69072946-69072965 | Msa1033810:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | + | chr7_1:69072952-69072971 | Msa1033810:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | + | chr7_1:69072961-69072980 | Msa1033810:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | + | chr7_1:69072966-69072985 | Msa1033810:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | + | chr7_1:69073051-69073070 | Msa1033810:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | - | chr7_1:69073068-69073087 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | + | chr7_1:69073117-69073136 | Msa1033810:CDS | 45.0% |
| ATCAGGCTCATAGGACTTGA+AGG | - | chr7_1:69073199-69073218 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | + | chr7_1:69073213-69073232 | Msa1033810:CDS | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | + | chr7_1:69073214-69073233 | Msa1033810:CDS | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | + | chr7_1:69073215-69073234 | Msa1033810:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | - | chr7_1:69073255-69073274 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | - | chr7_1:69073272-69073291 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | + | chr7_1:69073359-69073378 | Msa1033810:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | + | chr7_1:69073360-69073379 | Msa1033810:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | + | chr7_1:69073369-69073388 | Msa1033810:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | + | chr7_1:69073424-69073443 | Msa1033810:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+CGG | - | chr7_1:69073462-69073481 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | + | chr7_1:69073522-69073541 | Msa1033810:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | + | chr7_1:69073523-69073542 | Msa1033810:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | + | chr7_1:69073690-69073709 | Msa1033810:intron | 45.0% | |
| TGTATATGGTATAGGAGGCC+AGG | + | chr7_1:69073704-69073723 | Msa1033810:intron | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | - | chr7_1:69073837-69073856 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | - | chr7_1:69073838-69073857 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | + | chr7_1:69073892-69073911 | Msa1033810:CDS | 45.0% |
| TTGCGGTTCAGTACAAAGAC+CGG | + | chr7_1:69074070-69074089 | Msa1033810:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | - | chr7_1:69074117-69074136 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | + | chr7_1:69074117-69074136 | Msa1033810:CDS | 45.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | - | chr7_1:69072725-69072744 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | - | chr7_1:69072823-69072842 | None:intergenic | 45.0% | |
| TCTTGCGTGAACAGAAACCA+AGG | + | chr7_1:69072836-69072855 | Msa1033810:CDS | 45.0% | |
| TTCTACAGTTTCAACTGGCC+AGG | + | chr7_1:69072882-69072901 | Msa1033810:CDS | 45.0% | |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | - | chr7_1:69072913-69072932 | None:intergenic | 45.0% |
| CCAATGACCATTACTCGCTT+CGG | - | chr7_1:69072946-69072965 | None:intergenic | 45.0% | |
| AAGCGAGTAATGGTCATTGG+TGG | + | chr7_1:69072946-69072965 | Msa1033810:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | + | chr7_1:69072952-69072971 | Msa1033810:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | + | chr7_1:69072961-69072980 | Msa1033810:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | + | chr7_1:69072966-69072985 | Msa1033810:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | + | chr7_1:69073051-69073070 | Msa1033810:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | - | chr7_1:69073068-69073087 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | + | chr7_1:69073117-69073136 | Msa1033810:CDS | 45.0% |
| ATCAGGCTCATAGGACTTGA+AGG | - | chr7_1:69073199-69073218 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | + | chr7_1:69073213-69073232 | Msa1033810:CDS | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | + | chr7_1:69073214-69073233 | Msa1033810:CDS | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | + | chr7_1:69073215-69073234 | Msa1033810:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | - | chr7_1:69073255-69073274 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | - | chr7_1:69073272-69073291 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | + | chr7_1:69073359-69073378 | Msa1033810:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | + | chr7_1:69073360-69073379 | Msa1033810:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | + | chr7_1:69073369-69073388 | Msa1033810:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | + | chr7_1:69073424-69073443 | Msa1033810:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+CGG | - | chr7_1:69073462-69073481 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | + | chr7_1:69073522-69073541 | Msa1033810:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | + | chr7_1:69073523-69073542 | Msa1033810:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | + | chr7_1:69073690-69073709 | Msa1033810:intron | 45.0% | |
| TGTATATGGTATAGGAGGCC+AGG | + | chr7_1:69073704-69073723 | Msa1033810:intron | 45.0% | |
| TGAAGACTCTGAACTCTCCA+GGG | - | chr7_1:69073837-69073856 | None:intergenic | 45.0% | |
| TTGAAGACTCTGAACTCTCC+AGG | - | chr7_1:69073838-69073857 | None:intergenic | 45.0% | |
| !! | GCTGAACTTGTTACGAAAGC+TGG | + | chr7_1:69073892-69073911 | Msa1033810:CDS | 45.0% |
| TTGCGGTTCAGTACAAAGAC+CGG | + | chr7_1:69074070-69074089 | Msa1033810:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | - | chr7_1:69074117-69074136 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | + | chr7_1:69074117-69074136 | Msa1033810:CDS | 45.0% | |
| ! | GCCAGAACTAGTTTGAACCG+GGG | - | chr7_1:69072911-69072930 | None:intergenic | 50.0% |
| ! | CGCCAGAACTAGTTTGAACC+GGG | - | chr7_1:69072912-69072931 | None:intergenic | 50.0% |
| CCGAAGCGAGTAATGGTCAT+TGG | + | chr7_1:69072943-69072962 | Msa1033810:CDS | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | + | chr7_1:69072965-69072984 | Msa1033810:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | + | chr7_1:69072994-69073013 | Msa1033810:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | + | chr7_1:69073086-69073105 | Msa1033810:CDS | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | - | chr7_1:69073093-69073112 | None:intergenic | 50.0% | |
| ACACTGAATGCGATCCTGGA+TGG | - | chr7_1:69073103-69073122 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | + | chr7_1:69073103-69073122 | Msa1033810:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | - | chr7_1:69073107-69073126 | None:intergenic | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | - | chr7_1:69073208-69073227 | None:intergenic | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | - | chr7_1:69073216-69073235 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | - | chr7_1:69073430-69073449 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | + | chr7_1:69073529-69073548 | Msa1033810:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | + | chr7_1:69073530-69073549 | Msa1033810:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | + | chr7_1:69073549-69073568 | Msa1033810:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | + | chr7_1:69073669-69073688 | Msa1033810:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | + | chr7_1:69073807-69073826 | Msa1033810:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | + | chr7_1:69073903-69073922 | Msa1033810:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | + | chr7_1:69073904-69073923 | Msa1033810:CDS | 50.0% | |
| !! | TCTAGGGCTAGGCACTGATA+TGG | - | chr7_1:69073944-69073963 | None:intergenic | 50.0% |
| !! | TCTAACTCCACTCTAGGGCT+AGG | - | chr7_1:69073955-69073974 | None:intergenic | 50.0% |
| TAGCCCTAGAGTGGAGTTAG+AGG | + | chr7_1:69073954-69073973 | Msa1033810:CDS | 50.0% | |
| GCTCCTCTAACTCCACTCTA+GGG | - | chr7_1:69073960-69073979 | None:intergenic | 50.0% | |
| TGCTCCTCTAACTCCACTCT+AGG | - | chr7_1:69073961-69073980 | None:intergenic | 50.0% | |
| TGCGGTTCAGTACAAAGACC+GGG | + | chr7_1:69074071-69074090 | Msa1033810:CDS | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | + | chr7_1:69074113-69074132 | Msa1033810:CDS | 50.0% | |
| ! | GCCAGAACTAGTTTGAACCG+GGG | - | chr7_1:69072911-69072930 | None:intergenic | 50.0% |
| ! | CGCCAGAACTAGTTTGAACC+GGG | - | chr7_1:69072912-69072931 | None:intergenic | 50.0% |
| CCGAAGCGAGTAATGGTCAT+TGG | + | chr7_1:69072943-69072962 | Msa1033810:CDS | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | + | chr7_1:69072965-69072984 | Msa1033810:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | + | chr7_1:69072994-69073013 | Msa1033810:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | + | chr7_1:69073086-69073105 | Msa1033810:CDS | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | - | chr7_1:69073093-69073112 | None:intergenic | 50.0% | |
| ACACTGAATGCGATCCTGGA+TGG | - | chr7_1:69073103-69073122 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | + | chr7_1:69073103-69073122 | Msa1033810:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | - | chr7_1:69073107-69073126 | None:intergenic | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | - | chr7_1:69073208-69073227 | None:intergenic | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | - | chr7_1:69073216-69073235 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | - | chr7_1:69073430-69073449 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | + | chr7_1:69073529-69073548 | Msa1033810:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | + | chr7_1:69073530-69073549 | Msa1033810:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | + | chr7_1:69073549-69073568 | Msa1033810:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | + | chr7_1:69073669-69073688 | Msa1033810:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | + | chr7_1:69073807-69073826 | Msa1033810:CDS | 50.0% | |
| TACGAAAGCTGGCGAGAAGT+TGG | + | chr7_1:69073903-69073922 | Msa1033810:CDS | 50.0% | |
| ACGAAAGCTGGCGAGAAGTT+GGG | + | chr7_1:69073904-69073923 | Msa1033810:CDS | 50.0% | |
| !! | TCTAGGGCTAGGCACTGATA+TGG | - | chr7_1:69073944-69073963 | None:intergenic | 50.0% |
| !! | TCTAACTCCACTCTAGGGCT+AGG | - | chr7_1:69073955-69073974 | None:intergenic | 50.0% |
| TAGCCCTAGAGTGGAGTTAG+AGG | + | chr7_1:69073954-69073973 | Msa1033810:CDS | 50.0% | |
| GCTCCTCTAACTCCACTCTA+GGG | - | chr7_1:69073960-69073979 | None:intergenic | 50.0% | |
| TGCTCCTCTAACTCCACTCT+AGG | - | chr7_1:69073961-69073980 | None:intergenic | 50.0% | |
| TGCGGTTCAGTACAAAGACC+GGG | + | chr7_1:69074071-69074090 | Msa1033810:CDS | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | + | chr7_1:69074113-69074132 | Msa1033810:CDS | 50.0% | |
| TAGTTTGAACCGGGGCTTCC+TGG | - | chr7_1:69072903-69072922 | None:intergenic | 55.0% | |
| GCCCCGGTTCAAACTAGTTC+TGG | + | chr7_1:69072907-69072926 | Msa1033810:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | - | chr7_1:69073100-69073119 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | - | chr7_1:69073818-69073837 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | + | chr7_1:69073817-69073836 | Msa1033810:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | - | chr7_1:69073828-69073847 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | - | chr7_1:69073829-69073848 | None:intergenic | 55.0% |
| ATCAGTGCCTAGCCCTAGAG+TGG | + | chr7_1:69073945-69073964 | Msa1033810:CDS | 55.0% | |
| TAGTTTGAACCGGGGCTTCC+TGG | - | chr7_1:69072903-69072922 | None:intergenic | 55.0% | |
| GCCCCGGTTCAAACTAGTTC+TGG | + | chr7_1:69072907-69072926 | Msa1033810:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | - | chr7_1:69073100-69073119 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | - | chr7_1:69073818-69073837 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | + | chr7_1:69073817-69073836 | Msa1033810:CDS | 55.0% | |
| !! | TGAACTCTCCAGGGTTAGCC+GGG | - | chr7_1:69073828-69073847 | None:intergenic | 55.0% |
| ! | CTGAACTCTCCAGGGTTAGC+CGG | - | chr7_1:69073829-69073848 | None:intergenic | 55.0% |
| ATCAGTGCCTAGCCCTAGAG+TGG | + | chr7_1:69073945-69073964 | Msa1033810:CDS | 55.0% | |
| TTCAACTGGCCAGGAAGCCC+CGG | + | chr7_1:69072891-69072910 | Msa1033810:CDS | 60.0% | |
| CGGATCGCTGTTCCCCGAAA+TGG | - | chr7_1:69073230-69073249 | None:intergenic | 60.0% | |
| TTCAACTGGCCAGGAAGCCC+CGG | + | chr7_1:69072891-69072910 | Msa1033810:CDS | 60.0% | |
| CGGATCGCTGTTCCCCGAAA+TGG | - | chr7_1:69073230-69073249 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 69072694 | 69074167 | 69072694 | ID=Msa1033810;Name=Msa1033810 |
| chr7_1 | mRNA | 69072694 | 69074167 | 69072694 | ID=Msa1033810-mRNA-1;Parent=Msa1033810;Name=Msa1033810-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|2|0|470 |
| chr7_1 | exon | 69072694 | 69073704 | 69072694 | ID=Msa1033810-mRNA-1:exon:16212;Parent=Msa1033810-mRNA-1 |
| chr7_1 | exon | 69073766 | 69074167 | 69073766 | ID=Msa1033810-mRNA-1:exon:16213;Parent=Msa1033810-mRNA-1 |
| chr7_1 | CDS | 69072694 | 69073704 | 69072694 | ID=Msa1033810-mRNA-1:cds;Parent=Msa1033810-mRNA-1 |
| chr7_1 | CDS | 69073766 | 69074167 | 69073766 | ID=Msa1033810-mRNA-1:cds;Parent=Msa1033810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
