Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073670 | XP_003625059.1 | 98.952 | 477 | 5 | 0 | 1 | 477 | 1 | 477 | 0.0 | 989 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073670 | sp|Q84KI6|SQD1_SPIOL | 76.190 | 483 | 108 | 2 | 1 | 477 | 1 | 482 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073670 | G7KRQ8 | 98.952 | 477 | 5 | 0 | 1 | 477 | 1 | 477 | 0.0 | 989 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0115410 | Msa1073670 | 0.819049 | 1.424357e-52 | -8.615850e-47 |
| Msa0610300 | Msa1073670 | 0.800458 | 1.427790e-48 | -8.615850e-47 |
| Msa0624700 | Msa1073670 | 0.833088 | 6.518964e-56 | -8.615850e-47 |
| Msa0179200 | Msa1073670 | 0.824871 | 6.380958e-54 | -8.615850e-47 |
| Msa0199490 | Msa1073670 | 0.818256 | 2.155759e-52 | -8.615850e-47 |
| Msa0233200 | Msa1073670 | 0.801236 | 9.902305e-49 | -8.615850e-47 |
| Msa0380390 | Msa1073670 | 0.813002 | 3.190432e-51 | -8.615850e-47 |
| Msa1033790 | Msa1073670 | 0.904129 | 1.694192e-79 | -8.615850e-47 |
| Msa1033810 | Msa1073670 | 0.895256 | 1.139062e-75 | -8.615850e-47 |
| Msa1073670 | Msa1128200 | 0.812891 | 3.373956e-51 | -8.615850e-47 |
| Msa1073670 | Msa1340540 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa1073670 | Msa1400830 | 0.810292 | 1.239521e-50 | -8.615850e-47 |
| Msa0256590 | Msa1073670 | 0.825385 | 4.824587e-54 | -8.615850e-47 |
| Msa0295730 | Msa1073670 | 0.843661 | 1.221455e-58 | -8.615850e-47 |
| Msa0306160 | Msa1073670 | 0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0319340 | Msa1073670 | 0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa0515730 | Msa1073670 | 0.832092 | 1.151506e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073670 | MtrunA17_Chr7g0256731 | 98.952 | 477 | 5 | 0 | 1 | 477 | 1 | 477 | 0.0 | 989 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1073670 | AT4G33030.1 | 77.755 | 481 | 99 | 5 | 1 | 477 | 1 | 477 | 0.0 | 753 |
Find 148 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACTATGATGCAATATT+TGG | 0.140392 | 7_2:+71313923 | Msa1073670:CDS |
| CTGATGCTGTTGTCCATTTC+GGG | 0.173565 | 7_2:+71313507 | Msa1073670:CDS |
| ATTACTCGCTTCGGTTTAAA+AGG | 0.187741 | 7_2:-71313227 | None:intergenic |
| CCTTCCTCAATATCAATATT+TGG | 0.201469 | 7_2:-71313689 | None:intergenic |
| CCTGATGCTGTTGTCCATTT+CGG | 0.263402 | 7_2:+71313506 | Msa1073670:CDS |
| CTGAATCAAGGAGTGGTATA+TGG | 0.263921 | 7_2:+71313854 | Msa1073670:CDS |
| CCAAAGATCTATTCTACATT+AGG | 0.286556 | 7_2:-71316006 | None:intergenic |
| CGCAAGAAAAGCCGTCTAAA+TGG | 0.294684 | 7_2:-71313113 | None:intergenic |
| AGCTTTCACTTGCAAAGCTT+GGG | 0.304992 | 7_2:+71313814 | Msa1073670:CDS |
| TAGTTTGAACCGGGGCTTCC+TGG | 0.305214 | 7_2:-71313193 | None:intergenic |
| AAATTATGCCTGGTGTTTCT+TGG | 0.333741 | 7_2:+71315795 | Msa1073670:CDS |
| TGCAAGTGAAAGCTATGTTA+TGG | 0.335168 | 7_2:-71313805 | None:intergenic |
| GGTCATCCACTCACTGTATA+TGG | 0.336464 | 7_2:+71313983 | Msa1073670:CDS |
| GTGTTTCTTGGAGAAAGGTT+GGG | 0.344780 | 7_2:+71315807 | Msa1073670:CDS |
| AAGCCGTCTAAATGGAGTTT+TGG | 0.349474 | 7_2:-71313105 | None:intergenic |
| TTCGATAACAAGTATCAATT+GGG | 0.358728 | 7_2:-71312175 | None:intergenic |
| TGCATGAAGAGTTGTGTAAC+AGG | 0.360759 | 7_2:+71313900 | Msa1073670:CDS |
| TGATTCACTGCTTAACTTTG+CGG | 0.361307 | 7_2:+71315742 | Msa1073670:CDS |
| TTTCGATAACAAGTATCAAT+TGG | 0.367609 | 7_2:-71312176 | None:intergenic |
| GCCCCGGTTCAAACTAGTTC+TGG | 0.371819 | 7_2:+71313200 | Msa1073670:CDS |
| AAGTATCAATTGGGGTTCAT+AGG | 0.373638 | 7_2:-71312166 | None:intergenic |
| CTCATAGGACTTGAAGGTTT+CGG | 0.374096 | 7_2:-71313483 | None:intergenic |
| TCAAATATTGCATTGTAGAA+AGG | 0.378528 | 7_2:+71312200 | Msa1073670:five_prime_UTR |
| CCTAATGTAGAATAGATCTT+TGG | 0.382224 | 7_2:+71316006 | Msa1073670:three_prime_UTR |
| CGATCCTGGATGGAGGAAAT+TGG | 0.387488 | 7_2:-71313383 | None:intergenic |
| TAACCCTAGAGTGGAGTTAG+AGG | 0.392922 | 7_2:+71315643 | Msa1073670:CDS |
| GCAAGTGAAAGCTATGTTAT+GGG | 0.394552 | 7_2:-71313804 | None:intergenic |
| TCTAGGGTTAGGCACTGATA+TGG | 0.398330 | 7_2:-71315630 | None:intergenic |
| AACACTAAACTAGTTGATCT+TGG | 0.398824 | 7_2:+71315686 | Msa1073670:CDS |
| TAAAATGAGCTAGCTTGCTT+TGG | 0.399512 | 7_2:-71313758 | None:intergenic |
| TCCAACACTGAATGCGATCC+TGG | 0.403609 | 7_2:-71313397 | None:intergenic |
| TTGAAGACTCGGAACTCTCC+AGG | 0.404275 | 7_2:-71315524 | None:intergenic |
| CAAATATTGCATTGTAGAAA+GGG | 0.404609 | 7_2:+71312201 | Msa1073670:five_prime_UTR |
| GGTGTTTCTTGGAGAAAGGT+TGG | 0.408948 | 7_2:+71315806 | Msa1073670:CDS |
| TAGCTTTCACTTGCAAAGCT+TGG | 0.414968 | 7_2:+71313813 | Msa1073670:CDS |
| ATTGAATCGGTTCTGTGTTC+AGG | 0.420146 | 7_2:+71313952 | Msa1073670:CDS |
| CACTGATATTATATTACAAA+TGG | 0.423072 | 7_2:-71316093 | None:intergenic |
| ACAGAAACCAAGGAAAAGTT+TGG | 0.427205 | 7_2:+71313139 | Msa1073670:CDS |
| CAAAGATCTATTCTACATTA+GGG | 0.432678 | 7_2:-71316005 | None:intergenic |
| CCGAAATGGACAACAGCATC+AGG | 0.432925 | 7_2:-71313506 | None:intergenic |
| CGGAACTCTCCAGGGTTAGC+CGG | 0.438324 | 7_2:-71315515 | None:intergenic |
| TTCATCCTAAGGTGTGTGCT+TGG | 0.443590 | 7_2:+71315847 | Msa1073670:exon |
| ATCAGGCTCATAGGACTTGA+AGG | 0.444397 | 7_2:-71313489 | None:intergenic |
| AATTAGAGTGTAGAGTGAAA+TGG | 0.445710 | 7_2:-71312253 | None:intergenic |
| TGAATCAAGGAGTGGTATAT+GGG | 0.446459 | 7_2:+71313855 | Msa1073670:CDS |
| CTAGTCAAGCTTGGGACAAT+GGG | 0.448728 | 7_2:+71313653 | Msa1073670:CDS |
| TTCTGTGTTCAGGCTGCTGT+TGG | 0.451203 | 7_2:+71313962 | Msa1073670:CDS |
| CCTCGTAACCTTTGTTAGAA+AGG | 0.451936 | 7_2:-71313295 | None:intergenic |
| CCAATGACCATTACTCGCTT+CGG | 0.452722 | 7_2:-71313236 | None:intergenic |
| GATGTTGAGCATTGGTGAAA+AGG | 0.453224 | 7_2:-71313053 | None:intergenic |
| TATTCTACATTAGGGTATGA+AGG | 0.453997 | 7_2:-71315997 | None:intergenic |
| TGTTTCTTGGAGAAAGGTTG+GGG | 0.454574 | 7_2:+71315808 | Msa1073670:CDS |
| TAAGGTGTGTGCTTGGCTGC+TGG | 0.457236 | 7_2:+71315854 | Msa1073670:exon |
| GCCTGGTGTTTCTTGGAGAA+AGG | 0.462195 | 7_2:+71315802 | Msa1073670:CDS |
| TCGCCAGAACTAGTTTGAAC+CGG | 0.465526 | 7_2:-71313203 | None:intergenic |
| TTCTACAGTTTCAACTGGCC+AGG | 0.466150 | 7_2:+71313175 | Msa1073670:CDS |
| TACGAAAGCTGGTGAGAAGT+TGG | 0.467785 | 7_2:+71315592 | Msa1073670:CDS |
| CTTGGGACAATGGGTGAATA+CGG | 0.477903 | 7_2:+71313662 | Msa1073670:CDS |
| AATGCTTCTACAGTTTCAAC+TGG | 0.486284 | 7_2:+71313170 | Msa1073670:CDS |
| GCTGAGCTTGTTACGAAAGC+TGG | 0.488739 | 7_2:+71315581 | Msa1073670:CDS |
| ACGAAAGCTGGTGAGAAGTT+GGG | 0.489003 | 7_2:+71315593 | Msa1073670:CDS |
| CAGTGTTGGAAATCTCTCAC+TGG | 0.491751 | 7_2:+71313410 | Msa1073670:CDS |
| TATTTGGAACTGCATTGAAT+CGG | 0.493431 | 7_2:+71313939 | Msa1073670:CDS |
| GACAACAGCATCAGGCTCAT+AGG | 0.494062 | 7_2:-71313498 | None:intergenic |
| CAGTAAATTGATTGAAGACT+CGG | 0.495401 | 7_2:-71315535 | None:intergenic |
| CCGAAGCGAGTAATGGTCAT+TGG | 0.499010 | 7_2:+71313236 | Msa1073670:CDS |
| CACAGCAAAACAATGTTGTC+GGG | 0.499040 | 7_2:+71313582 | Msa1073670:CDS |
| AACGTGTTTGAAGTAGTTAG+AGG | 0.499079 | 7_2:+71312950 | Msa1073670:five_prime_UTR |
| CACACCAATTTCCTCCATCC+AGG | 0.500313 | 7_2:+71313379 | Msa1073670:CDS |
| CGCCAGAACTAGTTTGAACC+GGG | 0.501193 | 7_2:-71313202 | None:intergenic |
| GTGATTAGATTGTGCTGCAT+TGG | 0.503162 | 7_2:+71315908 | Msa1073670:three_prime_UTR |
| AACCTTTGTTAGAAAGGTGG+AGG | 0.503426 | 7_2:-71313289 | None:intergenic |
| GAGCTAGCTTGCTTTGGATA+CGG | 0.506316 | 7_2:-71313752 | None:intergenic |
| GGAACTCTCCAGGGTTAGCC+GGG | 0.506813 | 7_2:-71315514 | None:intergenic |
| AGAGAGAGACAAAGAAGAGA+AGG | 0.507714 | 7_2:+71312138 | Msa1073670:five_prime_UTR |
| TTGCGGTTCAGTACAAAGAC+CGG | 0.508555 | 7_2:+71315759 | Msa1073670:CDS |
| ATTGTCATCTAGTCAAGCTT+GGG | 0.509144 | 7_2:+71313645 | Msa1073670:CDS |
| CCAAATATTGATATTGAGGA+AGG | 0.509151 | 7_2:+71313689 | Msa1073670:CDS |
| GACCGGTCTATCATAGAGTA+AGG | 0.509269 | 7_2:-71313545 | None:intergenic |
| AACTCCAAATATTGATATTG+AGG | 0.510539 | 7_2:+71313685 | Msa1073670:CDS |
| AGAGGAACCTCTGATCGAAA+TGG | 0.511790 | 7_2:+71312968 | Msa1073670:exon |
| GTAATGGTCATTGGTGGAGA+TGG | 0.511804 | 7_2:+71313245 | Msa1073670:CDS |
| TCTAGTCAAGCTTGGGACAA+TGG | 0.511865 | 7_2:+71313652 | Msa1073670:CDS |
| GATTGTCATCTAGTCAAGCT+TGG | 0.511909 | 7_2:+71313644 | Msa1073670:CDS |
| CCACTCACTGTATATGGTAA+AGG | 0.514565 | 7_2:+71313989 | Msa1073670:CDS |
| TGAGCTTGCCATTGCAAACC+CGG | 0.515121 | 7_2:+71315496 | Msa1073670:CDS |
| TTCAACTGGCCAGGAAGCCC+CGG | 0.518120 | 7_2:+71313184 | Msa1073670:CDS |
| TGCTCCTCTAACTCCACTCT+AGG | 0.523420 | 7_2:-71315647 | None:intergenic |
| CTCCTTACTCTATGATAGAC+CGG | 0.525170 | 7_2:+71313543 | Msa1073670:CDS |
| CTCAGATAAAATTCAATCAA+AGG | 0.529979 | 7_2:-71316225 | None:intergenic |
| TTACTCGCTTCGGTTTAAAA+GGG | 0.531134 | 7_2:-71313226 | None:intergenic |
| ATTGCAAACCCGGCTAACCC+TGG | 0.532722 | 7_2:+71315506 | Msa1073670:CDS |
| GTGTATACACAGCTCTTGAC+CGG | 0.533184 | 7_2:-71313562 | None:intergenic |
| CACAAGTGTCATAATTATGT+AGG | 0.534036 | 7_2:-71315888 | None:intergenic |
| ACACAGCAAAACAATGTTGT+CGG | 0.535211 | 7_2:+71313581 | Msa1073670:CDS |
| TGTATATGGTAAAGGAGGCC+AGG | 0.535491 | 7_2:+71313997 | Msa1073670:CDS |
| CGGGCAACTGATCTGAATCA+AGG | 0.540528 | 7_2:+71313842 | Msa1073670:CDS |
| TGGAGATGGATACTGTGGTT+GGG | 0.542951 | 7_2:+71313259 | Msa1073670:CDS |
| AGCAGCCAAGCACACACCTT+AGG | 0.544690 | 7_2:-71315852 | None:intergenic |
| AATTGAGCCATTTCGATCAG+AGG | 0.547123 | 7_2:-71312975 | None:intergenic |
| GACACTAAGCAAATTATGCC+TGG | 0.547893 | 7_2:+71315785 | Msa1073670:CDS |
| TAAACAAGGTTTGTTTGAAG+CGG | 0.550343 | 7_2:-71313027 | None:intergenic |
| GCTTTCACTTGCAAAGCTTG+GGG | 0.550528 | 7_2:+71313815 | Msa1073670:CDS |
| ACTCCAAAACTCCATTTAGA+CGG | 0.553484 | 7_2:+71313102 | Msa1073670:CDS |
| GTGGAGATGGATACTGTGGT+TGG | 0.563462 | 7_2:+71313258 | Msa1073670:CDS |
| ACACTGAATGCGATCCTGGA+TGG | 0.563966 | 7_2:-71313393 | None:intergenic |
| GCTCCTCTAACTCCACTCTA+GGG | 0.565035 | 7_2:-71315646 | None:intergenic |
| TCCAGGATCGCATTCAGTGT+TGG | 0.567073 | 7_2:+71313396 | Msa1073670:CDS |
| TGTCCTTCCGTTGTGAGTGA+TGG | 0.571830 | 7_2:-71313720 | None:intergenic |
| AGGGTTAGCCGGGTTTGCAA+TGG | 0.573221 | 7_2:-71315504 | None:intergenic |
| TCGAGTCATATGTGTACGTA+GGG | 0.578072 | 7_2:+71316048 | Msa1073670:three_prime_UTR |
| CGTAACCTTTGTTAGAAAGG+TGG | 0.578750 | 7_2:-71313292 | None:intergenic |
| AAAAGTATTGAGCTATACAT+TGG | 0.580925 | 7_2:+71313434 | Msa1073670:CDS |
| TATAAAATGATGTTGAGCAT+TGG | 0.582743 | 7_2:-71313061 | None:intergenic |
| AAGCGAGTAATGGTCATTGG+TGG | 0.585308 | 7_2:+71313239 | Msa1073670:CDS |
| TCTAACTCCACTCTAGGGTT+AGG | 0.586318 | 7_2:-71315641 | None:intergenic |
| AGTGTTGGAAATCTCTCACT+GGG | 0.586597 | 7_2:+71313411 | Msa1073670:CDS |
| CCTTTCTAACAAAGGTTACG+AGG | 0.587127 | 7_2:+71313295 | Msa1073670:CDS |
| CCTTTACCATATACAGTGAG+TGG | 0.594076 | 7_2:-71313989 | None:intergenic |
| TGAAGACTCGGAACTCTCCA+GGG | 0.596954 | 7_2:-71315523 | None:intergenic |
| GTTTGAAGCGGAGAAAGTCA+AGG | 0.597796 | 7_2:-71313015 | None:intergenic |
| CTTTCACTTGCAAAGCTTGG+GGG | 0.598323 | 7_2:+71313816 | Msa1073670:CDS |
| TGAGAGAATCTAGTCCAAGC+TGG | 0.600491 | 7_2:-71313358 | None:intergenic |
| GCCCTCCACCTTTCTAACAA+AGG | 0.602875 | 7_2:+71313287 | Msa1073670:CDS |
| TGTATCTCTTATGTCAAGGA+AGG | 0.605182 | 7_2:-71315462 | None:intergenic |
| GAACTGTATCTCTTATGTCA+AGG | 0.608223 | 7_2:-71315466 | None:intergenic |
| CTCACTGTATATGGTAAAGG+AGG | 0.608718 | 7_2:+71313992 | Msa1073670:CDS |
| ATCAGTGCCTAACCCTAGAG+TGG | 0.611638 | 7_2:+71315634 | Msa1073670:CDS |
| ACCTTTGTTAGAAAGGTGGA+GGG | 0.612052 | 7_2:-71313288 | None:intergenic |
| AGAGAATCTGAAAGAAAGTG+TGG | 0.612228 | 7_2:-71315716 | None:intergenic |
| TCGAACAAGGTTGTCAACAA+TGG | 0.614328 | 7_2:-71313321 | None:intergenic |
| TGATGCTGTTGTCCATTTCG+GGG | 0.617432 | 7_2:+71313508 | Msa1073670:CDS |
| TTACCATCACTCACAACGGA+AGG | 0.617927 | 7_2:+71313717 | Msa1073670:CDS |
| CTGAATGCGATCCTGGATGG+AGG | 0.618262 | 7_2:-71313390 | None:intergenic |
| TCGATAACAAGTATCAATTG+GGG | 0.618686 | 7_2:-71312174 | None:intergenic |
| TGCGGTTCAGTACAAAGACC+GGG | 0.625601 | 7_2:+71315760 | Msa1073670:CDS |
| TCTTGCGAGAACAGAAACCA+AGG | 0.641034 | 7_2:+71313129 | Msa1073670:CDS |
| ACCTTTCTCCAAGAAACACC+AGG | 0.645278 | 7_2:-71315803 | None:intergenic |
| TAATTTGCTTAGTGTCAACC+CGG | 0.652985 | 7_2:-71315778 | None:intergenic |
| GTCTATCATAGAGTAAGGAG+CGG | 0.663083 | 7_2:-71313540 | None:intergenic |
| GAATCAAGGAGTGGTATATG+GGG | 0.664294 | 7_2:+71313856 | Msa1073670:CDS |
| AACTGATCTGAATCAAGGAG+TGG | 0.668884 | 7_2:+71313847 | Msa1073670:CDS |
| ATTGGTGGAGATGGATACTG+TGG | 0.674313 | 7_2:+71313254 | Msa1073670:CDS |
| CTACGTACACATATGACTCG+AGG | 0.675868 | 7_2:-71316046 | None:intergenic |
| CTCGAGTCATATGTGTACGT+AGG | 0.678012 | 7_2:+71316047 | Msa1073670:three_prime_UTR |
| TATATTACCATCACTCACAA+CGG | 0.680492 | 7_2:+71313713 | Msa1073670:CDS |
| GCCAGAACTAGTTTGAACCG+GGG | 0.700751 | 7_2:-71313201 | None:intergenic |
| TGCTATAAAAGAGTACAGAG+AGG | 0.711022 | 7_2:+71313622 | Msa1073670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGCTTTATTTTAAATTAA+TGG | + | chr7_2:71312524-71312543 | Msa1073670:intron | 10.0% |
| !!! | TTTTTTTAATCTTATTTTCT+AGG | - | chr7_2:71315038-71315057 | None:intergenic | 10.0% |
| !!! | TTAAAAAAATATTTTTTGTG+TGG | + | chr7_2:71315049-71315068 | Msa1073670:intron | 10.0% |
| !!! | AAAAAAAATGTGTTATTAAT+AGG | + | chr7_2:71315081-71315100 | Msa1073670:intron | 10.0% |
| !! | AATTCTAGATAAATTTGATT+TGG | + | chr7_2:71312548-71312567 | Msa1073670:intron | 15.0% |
| !! | TATCAATAAGAAATAAACAA+GGG | - | chr7_2:71314035-71314054 | None:intergenic | 15.0% |
| !! | TTATCAATAAGAAATAAACA+AGG | - | chr7_2:71314036-71314055 | None:intergenic | 15.0% |
| !! | TATGCTTAATAAGTTAATAA+TGG | - | chr7_2:71314287-71314306 | None:intergenic | 15.0% |
| !!! | CAGATATTTTTTTAGAAAAT+AGG | + | chr7_2:71314668-71314687 | Msa1073670:intron | 15.0% |
| !! | TTATTGTTTAAATTACTTCT+TGG | + | chr7_2:71315224-71315243 | Msa1073670:intron | 15.0% |
| !!! | ATACTTCATTTTCTTTATGT+GGG | + | chr7_2:71312435-71312454 | Msa1073670:intron | 20.0% |
| !!! | TGATCATTATCAATTTTGTA+GGG | - | chr7_2:71312681-71312700 | None:intergenic | 20.0% |
| !!! | ATGATCATTATCAATTTTGT+AGG | - | chr7_2:71312682-71312701 | None:intergenic | 20.0% |
| !! | TGTGAATAAAAATCAACATA+AGG | - | chr7_2:71312746-71312765 | None:intergenic | 20.0% |
| !!! | AAATTATTAGTCTTTGCTTT+TGG | + | chr7_2:71312795-71312814 | Msa1073670:intron | 20.0% |
| !! | CTGAAACAATAATTAAAATC+CGG | - | chr7_2:71312929-71312948 | None:intergenic | 20.0% |
| !! | ATTATAAAATGTATTCTACG+AGG | - | chr7_2:71314243-71314262 | None:intergenic | 20.0% |
| !! | ATAATTAAACCATATAACTG+CGG | + | chr7_2:71314461-71314480 | Msa1073670:intron | 20.0% |
| !! | ATCTATATGCACATAAAAAA+AGG | - | chr7_2:71314518-71314537 | None:intergenic | 20.0% |
| !! | ATTGGTACAAATTATAGTTA+GGG | - | chr7_2:71314962-71314981 | None:intergenic | 20.0% |
| !! | AATTGGTACAAATTATAGTT+AGG | - | chr7_2:71314961-71314980 | None:intergenic | 20.0% |
| !!! | AACTATAATTTGTACCAATT+TGG | + | chr7_2:71314745-71314764 | Msa1073670:intron | 20.0% |
| !!! | AACTATAATTTGTACCAATT+TGG | - | chr7_2:71314745-71314764 | None:intergenic | 20.0% |
| !! | AATTGGTACAAATTATAGTT+AGG | + | chr7_2:71314961-71314980 | Msa1073670:intron | 20.0% |
| !! | ATTGGTACAAATTATAGTTA+GGG | + | chr7_2:71314962-71314981 | Msa1073670:intron | 20.0% |
| !! | CATATAGCAAAATAAATGTA+AGG | + | chr7_2:71315113-71315132 | Msa1073670:intron | 20.0% |
| !!! | GAAAAATTTGTTAATGGAAA+TGG | + | chr7_2:71315342-71315361 | Msa1073670:intron | 20.0% |
| !! | ACATGCAAAAAATTAATTAG+TGG | - | chr7_2:71315410-71315429 | None:intergenic | 20.0% |
| !! | CACTGATATTATATTACAAA+TGG | - | chr7_2:71316096-71316115 | None:intergenic | 20.0% |
| ! | TTCGATAACAAGTATCAATT+GGG | - | chr7_2:71312178-71312197 | None:intergenic | 25.0% |
| ! | TTTCGATAACAAGTATCAAT+TGG | - | chr7_2:71312179-71312198 | None:intergenic | 25.0% |
| ! | TCAAATATTGCATTGTAGAA+AGG | + | chr7_2:71312200-71312219 | Msa1073670:five_prime_UTR | 25.0% |
| ! | CAAATATTGCATTGTAGAAA+GGG | + | chr7_2:71312201-71312220 | Msa1073670:five_prime_UTR | 25.0% |
| ! | TTCATAAAATTGTGCAAACA+TGG | - | chr7_2:71312352-71312371 | None:intergenic | 25.0% |
| !! | TTTGCACAATTTTATGAAGT+GGG | + | chr7_2:71312354-71312373 | Msa1073670:intron | 25.0% |
| !! | CATACTTCATTTTCTTTATG+TGG | + | chr7_2:71312434-71312453 | Msa1073670:intron | 25.0% |
| !! | GATTCTGAAAATCAACAAAA+AGG | - | chr7_2:71312467-71312486 | None:intergenic | 25.0% |
| ! | GGTAATTTCAGTAAAAAGAA+AGG | + | chr7_2:71312602-71312621 | Msa1073670:intron | 25.0% |
| ! | AGACTAATAATTTCATCATC+AGG | - | chr7_2:71312788-71312807 | None:intergenic | 25.0% |
| ! | TTGTTCTTGATATACAAAGA+TGG | + | chr7_2:71312822-71312841 | Msa1073670:intron | 25.0% |
| !!! | CGGATTTTAATTATTGTTTC+AGG | + | chr7_2:71312927-71312946 | Msa1073670:intron | 25.0% |
| ! | TATAAAATGATGTTGAGCAT+TGG | - | chr7_2:71313064-71313083 | None:intergenic | 25.0% |
| !! | CTCAACATCATTTTATAACA+CGG | + | chr7_2:71313067-71313086 | Msa1073670:CDS | 25.0% |
| !!! | AAAAGTATTGAGCTATACAT+TGG | + | chr7_2:71313434-71313453 | Msa1073670:CDS | 25.0% |
| ! | AACTCCAAATATTGATATTG+AGG | + | chr7_2:71313685-71313704 | Msa1073670:CDS | 25.0% |
| !! | CTCATTTTATCATTTAAGCA+AGG | + | chr7_2:71313772-71313791 | Msa1073670:CDS | 25.0% |
| ! | TTTGACTATGATGCAATATT+TGG | + | chr7_2:71313923-71313942 | Msa1073670:CDS | 25.0% |
| ! | ATAAGAAATAAACAAGGGAT+TGG | - | chr7_2:71314030-71314049 | None:intergenic | 25.0% |
| !! | AAAATCTATGATTTTGCCAT+TGG | - | chr7_2:71314084-71314103 | None:intergenic | 25.0% |
| !!! | TTTTTCAAACTTTTCGAACT+TGG | + | chr7_2:71314109-71314128 | Msa1073670:intron | 25.0% |
| !! | TTTTCTTTTCGACACAATTT+TGG | - | chr7_2:71314320-71314339 | None:intergenic | 25.0% |
| ! | TTGGTACAAATTATAGTTAG+GGG | - | chr7_2:71314963-71314982 | None:intergenic | 25.0% |
| ! | TTGGTACAAATTATAGTTAG+GGG | + | chr7_2:71314963-71314982 | Msa1073670:intron | 25.0% |
| ! | ATAGTCAGCATATTCAATAT+GGG | + | chr7_2:71315247-71315266 | Msa1073670:intron | 25.0% |
| ! | TATTACCGTGAAATTCAATA+TGG | + | chr7_2:71315274-71315293 | Msa1073670:intron | 25.0% |
| ! | CTAAACCATATTGAATTTCA+CGG | - | chr7_2:71315282-71315301 | None:intergenic | 25.0% |
| !!! | GATGCTGAAAAATTTGTTAA+TGG | + | chr7_2:71315336-71315355 | Msa1073670:intron | 25.0% |
| !! | GCTTTTGTATACTATAATCT+CGG | + | chr7_2:71315959-71315978 | Msa1073670:three_prime_UTR | 25.0% |
| !! | CTTTTGTATACTATAATCTC+GGG | + | chr7_2:71315960-71315979 | Msa1073670:three_prime_UTR | 25.0% |
| ! | CAAAGATCTATTCTACATTA+GGG | - | chr7_2:71316008-71316027 | None:intergenic | 25.0% |
| ! | CTCAGATAAAATTCAATCAA+AGG | - | chr7_2:71316228-71316247 | None:intergenic | 25.0% |
| TCGATAACAAGTATCAATTG+GGG | - | chr7_2:71312177-71312196 | None:intergenic | 30.0% | |
| !! | AATGGATTTTGCTAACATGT+GGG | - | chr7_2:71312238-71312257 | None:intergenic | 30.0% |
| !! | AAATGGATTTTGCTAACATG+TGG | - | chr7_2:71312239-71312258 | None:intergenic | 30.0% |
| AATTAGAGTGTAGAGTGAAA+TGG | - | chr7_2:71312256-71312275 | None:intergenic | 30.0% | |
| ! | AGGATATAGGTTGAAAAAGA+GGG | - | chr7_2:71312302-71312321 | None:intergenic | 30.0% |
| ! | AAGGATATAGGTTGAAAAAG+AGG | - | chr7_2:71312303-71312322 | None:intergenic | 30.0% |
| ATTCAAGTGAAGAAGGATAT+AGG | - | chr7_2:71312315-71312334 | None:intergenic | 30.0% | |
| ! | GTTTGCACAATTTTATGAAG+TGG | + | chr7_2:71312353-71312372 | Msa1073670:intron | 30.0% |
| TCAGAATCATTACTTGTGTT+TGG | + | chr7_2:71312479-71312498 | Msa1073670:intron | 30.0% | |
| CAGAATCATTACTTGTGTTT+GGG | + | chr7_2:71312480-71312499 | Msa1073670:intron | 30.0% | |
| !! | TGGTTAAAATTGTTCTGAAG+TGG | + | chr7_2:71312568-71312587 | Msa1073670:intron | 30.0% |
| !! | AAAATTGTTCTGAAGTGGTT+AGG | + | chr7_2:71312573-71312592 | Msa1073670:intron | 30.0% |
| CAGTAAAAAGAAAGGAAAAG+AGG | + | chr7_2:71312610-71312629 | Msa1073670:intron | 30.0% | |
| GGAAAAGAGGTAATGAAAAA+TGG | + | chr7_2:71312623-71312642 | Msa1073670:intron | 30.0% | |
| ! | TAAACAAGGTTTGTTTGAAG+CGG | - | chr7_2:71313030-71313049 | None:intergenic | 30.0% |
| !!! | TGGTGAAAAGGTTTTAAACA+AGG | - | chr7_2:71313044-71313063 | None:intergenic | 30.0% |
| CCTTCCTCAATATCAATATT+TGG | - | chr7_2:71313692-71313711 | None:intergenic | 30.0% | |
| CCAAATATTGATATTGAGGA+AGG | + | chr7_2:71313689-71313708 | Msa1073670:CDS | 30.0% | |
| TATATTACCATCACTCACAA+CGG | + | chr7_2:71313713-71313732 | Msa1073670:CDS | 30.0% | |
| ! | TATTTGGAACTGCATTGAAT+CGG | + | chr7_2:71313939-71313958 | Msa1073670:CDS | 30.0% |
| !! | AGAATTAAAGAGTATTGGTG+AGG | + | chr7_2:71314156-71314175 | Msa1073670:intron | 30.0% |
| ! | TCATATTTTCCGCAGTTATA+TGG | - | chr7_2:71314473-71314492 | None:intergenic | 30.0% |
| TATAACTGCGGAAAATATGA+TGG | + | chr7_2:71314473-71314492 | Msa1073670:intron | 30.0% | |
| AATAGGCTTATTCAATCAAC+CGG | + | chr7_2:71314685-71314704 | Msa1073670:intron | 30.0% | |
| TAGTAACGAAGCAAAACATA+GGG | - | chr7_2:71314773-71314792 | None:intergenic | 30.0% | |
| !!! | TTACTAGTTTTAGTCCTTTC+TGG | + | chr7_2:71314787-71314806 | Msa1073670:intron | 30.0% |
| CGTTAACTTATGTACCAATT+TGG | + | chr7_2:71314828-71314847 | Msa1073670:intron | 30.0% | |
| TCAAAAAAACGTGAACAGAA+AGG | - | chr7_2:71314887-71314906 | None:intergenic | 30.0% | |
| TTTGAGAGAAACCAACATAA+AGG | + | chr7_2:71314902-71314921 | Msa1073670:intron | 30.0% | |
| !!! | CTAGTTTTAGTCCTTTATGT+TGG | - | chr7_2:71314916-71314935 | None:intergenic | 30.0% |
| ! | CTTCATTGATTGTCTCAATT+TGG | - | chr7_2:71314990-71315009 | None:intergenic | 30.0% |
| TGAGACAATCAATGAAGTTA+AGG | + | chr7_2:71314993-71315012 | Msa1073670:intron | 30.0% | |
| GAGACAATCAATGAAGTTAA+GGG | + | chr7_2:71314994-71315013 | Msa1073670:intron | 30.0% | |
| GATAGTCAGCATATTCAATA+TGG | + | chr7_2:71315246-71315265 | Msa1073670:intron | 30.0% | |
| ATGAGATTTACATACGAACA+TGG | + | chr7_2:71315311-71315330 | Msa1073670:intron | 30.0% | |
| CAGTAAATTGATTGAAGACT+CGG | - | chr7_2:71315538-71315557 | None:intergenic | 30.0% | |
| AACACTAAACTAGTTGATCT+TGG | + | chr7_2:71315686-71315705 | Msa1073670:CDS | 30.0% | |
| ACAAAAACTCTTTCATCCTA+AGG | + | chr7_2:71315836-71315855 | Msa1073670:CDS | 30.0% | |
| CACAAGTGTCATAATTATGT+AGG | - | chr7_2:71315891-71315910 | None:intergenic | 30.0% | |
| TATTCTACATTAGGGTATGA+AGG | - | chr7_2:71316000-71316019 | None:intergenic | 30.0% | |
| CCAAAGATCTATTCTACATT+AGG | - | chr7_2:71316009-71316028 | None:intergenic | 30.0% | |
| CCTAATGTAGAATAGATCTT+TGG | + | chr7_2:71316006-71316025 | Msa1073670:three_prime_UTR | 30.0% | |
| AAGTATCAATTGGGGTTCAT+AGG | - | chr7_2:71312169-71312188 | None:intergenic | 35.0% | |
| ! | TCTAATTTTGCATTCTCTCC+AGG | + | chr7_2:71312269-71312288 | Msa1073670:five_prime_UTR | 35.0% |
| CAGAACAATTCAAGTGAAGA+AGG | - | chr7_2:71312322-71312341 | None:intergenic | 35.0% | |
| ! | ACAATTTTATGAAGTGGGCA+TGG | + | chr7_2:71312359-71312378 | Msa1073670:intron | 35.0% |
| ! | AGAGTCTTTTGAGCATGTAA+AGG | + | chr7_2:71312396-71312415 | Msa1073670:intron | 35.0% |
| AATCATTACTTGTGTTTGGG+TGG | + | chr7_2:71312483-71312502 | Msa1073670:intron | 35.0% | |
| !! | TTTGGGTGGATTGTTGTTAT+TGG | + | chr7_2:71312497-71312516 | Msa1073670:intron | 35.0% |
| TGAAGTGAAATGCAAATGAC+CGG | + | chr7_2:71312907-71312926 | Msa1073670:intron | 35.0% | |
| ! | AACGTGTTTGAAGTAGTTAG+AGG | + | chr7_2:71312950-71312969 | Msa1073670:five_prime_UTR | 35.0% |
| ACTCCAAAACTCCATTTAGA+CGG | + | chr7_2:71313102-71313121 | Msa1073670:CDS | 35.0% | |
| ACAGAAACCAAGGAAAAGTT+TGG | + | chr7_2:71313139-71313158 | Msa1073670:CDS | 35.0% | |
| AATGCTTCTACAGTTTCAAC+TGG | + | chr7_2:71313170-71313189 | Msa1073670:CDS | 35.0% | |
| TTACTCGCTTCGGTTTAAAA+GGG | - | chr7_2:71313229-71313248 | None:intergenic | 35.0% | |
| ATTACTCGCTTCGGTTTAAA+AGG | - | chr7_2:71313230-71313249 | None:intergenic | 35.0% | |
| ! | TTTTAAACCGAAGCGAGTAA+TGG | + | chr7_2:71313229-71313248 | Msa1073670:CDS | 35.0% |
| ACACAGCAAAACAATGTTGT+CGG | + | chr7_2:71313581-71313600 | Msa1073670:CDS | 35.0% | |
| ! | TGCTATAAAAGAGTACAGAG+AGG | + | chr7_2:71313622-71313641 | Msa1073670:CDS | 35.0% |
| ATTGTCATCTAGTCAAGCTT+GGG | + | chr7_2:71313645-71313664 | Msa1073670:CDS | 35.0% | |
| !! | TAAAATGAGCTAGCTTGCTT+TGG | - | chr7_2:71313761-71313780 | None:intergenic | 35.0% |
| GCAAGTGAAAGCTATGTTAT+GGG | - | chr7_2:71313807-71313826 | None:intergenic | 35.0% | |
| TGCAAGTGAAAGCTATGTTA+TGG | - | chr7_2:71313808-71313827 | None:intergenic | 35.0% | |
| TGAATCAAGGAGTGGTATAT+GGG | + | chr7_2:71313855-71313874 | Msa1073670:CDS | 35.0% | |
| GGATGTGTTTATGTCATTAC+TGG | + | chr7_2:71314130-71314149 | Msa1073670:intron | 35.0% | |
| ! | GGTGCAGAATTAAAGAGTAT+TGG | + | chr7_2:71314151-71314170 | Msa1073670:intron | 35.0% |
| ! | TTTCGACACAATTTTGGATC+AGG | - | chr7_2:71314314-71314333 | None:intergenic | 35.0% |
| GTCGAAAAGAAAAACTGCTA+AGG | + | chr7_2:71314327-71314346 | Msa1073670:intron | 35.0% | |
| CAATAGAGTAGTACCTCAAA+TGG | + | chr7_2:71314570-71314589 | Msa1073670:intron | 35.0% | |
| GAGACAAAAAACTCCATTTG+AGG | - | chr7_2:71314586-71314605 | None:intergenic | 35.0% | |
| AATCAATGAAGTTAAGGGAC+CGG | - | chr7_2:71314999-71315018 | None:intergenic | 35.0% | |
| GCGACAATCAATGAAGTTAA+GGG | - | chr7_2:71314712-71314731 | None:intergenic | 35.0% | |
| TGCGACAATCAATGAAGTTA+AGG | - | chr7_2:71314713-71314732 | None:intergenic | 35.0% | |
| ! | CTTCATTGATTGTCGCAATT+TGG | + | chr7_2:71314716-71314735 | Msa1073670:intron | 35.0% |
| AGTAACGAAGCAAAACATAG+GGG | - | chr7_2:71314772-71314791 | None:intergenic | 35.0% | |
| CTAGTAACGAAGCAAAACAT+AGG | - | chr7_2:71314774-71314793 | None:intergenic | 35.0% | |
| TTTGAGAGAAACTACCAGAA+AGG | - | chr7_2:71314804-71314823 | None:intergenic | 35.0% | |
| GAAAGGACTAAAACTAGGAA+CGG | - | chr7_2:71314870-71314889 | None:intergenic | 35.0% | |
| GAACAGAAAGGACTAAAACT+AGG | - | chr7_2:71314875-71314894 | None:intergenic | 35.0% | |
| AGTAACAGAGCAAAACATAG+AGG | + | chr7_2:71314934-71314953 | Msa1073670:intron | 35.0% | |
| CAAAACATAGAGGACCAAAT+TGG | + | chr7_2:71314944-71314963 | Msa1073670:intron | 35.0% | |
| AATCAATGAAGTTAAGGGAC+CGG | + | chr7_2:71314999-71315018 | Msa1073670:intron | 35.0% | |
| AGGCTTGATCTTCAATGAAT+AGG | + | chr7_2:71315133-71315152 | Msa1073670:intron | 35.0% | |
| !!! | TCTTCGCCTAAAGTTTTGAA+GGG | - | chr7_2:71315168-71315187 | None:intergenic | 35.0% |
| !! | ATCTTCGCCTAAAGTTTTGA+AGG | - | chr7_2:71315169-71315188 | None:intergenic | 35.0% |
| AGATTTACATACGAACATGG+TGG | + | chr7_2:71315314-71315333 | Msa1073670:intron | 35.0% | |
| TGATTCACATGTTTCAGACT+AGG | + | chr7_2:71315438-71315457 | Msa1073670:intron | 35.0% | |
| GATTCACATGTTTCAGACTA+GGG | + | chr7_2:71315439-71315458 | Msa1073670:intron | 35.0% | |
| TGTATCTCTTATGTCAAGGA+AGG | - | chr7_2:71315465-71315484 | None:intergenic | 35.0% | |
| GAACTGTATCTCTTATGTCA+AGG | - | chr7_2:71315469-71315488 | None:intergenic | 35.0% | |
| ! | CTGATATGGTTTTCACATCA+AGG | - | chr7_2:71315619-71315638 | None:intergenic | 35.0% |
| AGAGAATCTGAAAGAAAGTG+TGG | - | chr7_2:71315719-71315738 | None:intergenic | 35.0% | |
| TGATTCACTGCTTAACTTTG+CGG | + | chr7_2:71315742-71315761 | Msa1073670:CDS | 35.0% | |
| !! | TAATTTGCTTAGTGTCAACC+CGG | - | chr7_2:71315781-71315800 | None:intergenic | 35.0% |
| AAATTATGCCTGGTGTTTCT+TGG | + | chr7_2:71315795-71315814 | Msa1073670:CDS | 35.0% | |
| AGAGAGAGACAAAGAAGAGA+AGG | + | chr7_2:71312138-71312157 | Msa1073670:five_prime_UTR | 40.0% | |
| ! | TTTTGCTAACATGTGGGTTC+TGG | - | chr7_2:71312232-71312251 | None:intergenic | 40.0% |
| GAAAAAGAGGGTAACTAACC+TGG | - | chr7_2:71312290-71312309 | None:intergenic | 40.0% | |
| !! | TGTTCTGAAGTGGTTAGGAA+TGG | + | chr7_2:71312578-71312597 | Msa1073670:intron | 40.0% |
| AATTGAGCCATTTCGATCAG+AGG | - | chr7_2:71312978-71312997 | None:intergenic | 40.0% | |
| !! | GATGTTGAGCATTGGTGAAA+AGG | - | chr7_2:71313056-71313075 | None:intergenic | 40.0% |
| ! | AAGCCGTCTAAATGGAGTTT+TGG | - | chr7_2:71313108-71313127 | None:intergenic | 40.0% |
| ! | ACAACTGCCAAACTTTTCCT+TGG | - | chr7_2:71313149-71313168 | None:intergenic | 40.0% |
| ACCTTTGTTAGAAAGGTGGA+GGG | - | chr7_2:71313291-71313310 | None:intergenic | 40.0% | |
| AACCTTTGTTAGAAAGGTGG+AGG | - | chr7_2:71313292-71313311 | None:intergenic | 40.0% | |
| CGTAACCTTTGTTAGAAAGG+TGG | - | chr7_2:71313295-71313314 | None:intergenic | 40.0% | |
| CCTCGTAACCTTTGTTAGAA+AGG | - | chr7_2:71313298-71313317 | None:intergenic | 40.0% | |
| CCTTTCTAACAAAGGTTACG+AGG | + | chr7_2:71313295-71313314 | Msa1073670:CDS | 40.0% | |
| TCGAACAAGGTTGTCAACAA+TGG | - | chr7_2:71313324-71313343 | None:intergenic | 40.0% | |
| GATCAAAAAGACGTCGAACA+AGG | - | chr7_2:71313337-71313356 | None:intergenic | 40.0% | |
| ! | AGTGTTGGAAATCTCTCACT+GGG | + | chr7_2:71313411-71313430 | Msa1073670:CDS | 40.0% |
| CTCATAGGACTTGAAGGTTT+CGG | - | chr7_2:71313486-71313505 | None:intergenic | 40.0% | |
| GTCTATCATAGAGTAAGGAG+CGG | - | chr7_2:71313543-71313562 | None:intergenic | 40.0% | |
| CTCCTTACTCTATGATAGAC+CGG | + | chr7_2:71313543-71313562 | Msa1073670:CDS | 40.0% | |
| CACAGCAAAACAATGTTGTC+GGG | + | chr7_2:71313582-71313601 | Msa1073670:CDS | 40.0% | |
| GATTGTCATCTAGTCAAGCT+TGG | + | chr7_2:71313644-71313663 | Msa1073670:CDS | 40.0% | |
| TAGCTTTCACTTGCAAAGCT+TGG | + | chr7_2:71313813-71313832 | Msa1073670:CDS | 40.0% | |
| AGCTTTCACTTGCAAAGCTT+GGG | + | chr7_2:71313814-71313833 | Msa1073670:CDS | 40.0% | |
| AACTGATCTGAATCAAGGAG+TGG | + | chr7_2:71313847-71313866 | Msa1073670:CDS | 40.0% | |
| CTGAATCAAGGAGTGGTATA+TGG | + | chr7_2:71313854-71313873 | Msa1073670:CDS | 40.0% | |
| GAATCAAGGAGTGGTATATG+GGG | + | chr7_2:71313856-71313875 | Msa1073670:CDS | 40.0% | |
| TGCATGAAGAGTTGTGTAAC+AGG | + | chr7_2:71313900-71313919 | Msa1073670:CDS | 40.0% | |
| ! | ATTGAATCGGTTCTGTGTTC+AGG | + | chr7_2:71313952-71313971 | Msa1073670:CDS | 40.0% |
| CCTTTACCATATACAGTGAG+TGG | - | chr7_2:71313992-71314011 | None:intergenic | 40.0% | |
| CCACTCACTGTATATGGTAA+AGG | + | chr7_2:71313989-71314008 | Msa1073670:CDS | 40.0% | |
| CTCACTGTATATGGTAAAGG+AGG | + | chr7_2:71313992-71314011 | Msa1073670:CDS | 40.0% | |
| AGAACAGTGACTGTTTCCAA+TGG | + | chr7_2:71314065-71314084 | Msa1073670:intron | 40.0% | |
| ATGGAAGTAAATGTCAACGC+AGG | - | chr7_2:71314268-71314287 | None:intergenic | 40.0% | |
| CAAAACATAGGGGACCAAAT+TGG | - | chr7_2:71314762-71314781 | None:intergenic | 40.0% | |
| CAAAACATAGGGGACCAAAT+TGG | - | chr7_2:71314762-71314781 | None:intergenic | 40.0% | |
| TAGGAACGGAGCAAAACATA+GGG | - | chr7_2:71314856-71314875 | None:intergenic | 40.0% | |
| ATCAATGAAGTTAAGGGACC+GGG | + | chr7_2:71315000-71315019 | Msa1073670:intron | 40.0% | |
| TCTAGGCTTATTCAATCACC+CGG | - | chr7_2:71315021-71315040 | None:intergenic | 40.0% | |
| GGCTACTACTAGTGTATAGA+TGG | + | chr7_2:71315363-71315382 | Msa1073670:intron | 40.0% | |
| GACACTAAGCAAATTATGCC+TGG | + | chr7_2:71315785-71315804 | Msa1073670:CDS | 40.0% | |
| GTGTTTCTTGGAGAAAGGTT+GGG | + | chr7_2:71315807-71315826 | Msa1073670:CDS | 40.0% | |
| TGTTTCTTGGAGAAAGGTTG+GGG | + | chr7_2:71315808-71315827 | Msa1073670:CDS | 40.0% | |
| GTGATTAGATTGTGCTGCAT+TGG | + | chr7_2:71315908-71315927 | Msa1073670:three_prime_UTR | 40.0% | |
| TCGAGTCATATGTGTACGTA+GGG | + | chr7_2:71316048-71316067 | Msa1073670:three_prime_UTR | 40.0% | |
| ! | TCTGAAGTGGTTAGGAATGG+AGG | + | chr7_2:71312581-71312600 | Msa1073670:intron | 45.0% |
| !! | AACAGACGCGCTTTGAGAAA+TGG | - | chr7_2:71312723-71312742 | None:intergenic | 45.0% |
| AGAGGAACCTCTGATCGAAA+TGG | + | chr7_2:71312968-71312987 | Msa1073670:exon | 45.0% | |
| ! | GTTTGAAGCGGAGAAAGTCA+AGG | - | chr7_2:71313018-71313037 | None:intergenic | 45.0% |
| CGCAAGAAAAGCCGTCTAAA+TGG | - | chr7_2:71313116-71313135 | None:intergenic | 45.0% | |
| TCTTGCGAGAACAGAAACCA+AGG | + | chr7_2:71313129-71313148 | Msa1073670:CDS | 45.0% | |
| TTCTACAGTTTCAACTGGCC+AGG | + | chr7_2:71313175-71313194 | Msa1073670:CDS | 45.0% | |
| ! | TCGCCAGAACTAGTTTGAAC+CGG | - | chr7_2:71313206-71313225 | None:intergenic | 45.0% |
| CCAATGACCATTACTCGCTT+CGG | - | chr7_2:71313239-71313258 | None:intergenic | 45.0% | |
| AAGCGAGTAATGGTCATTGG+TGG | + | chr7_2:71313239-71313258 | Msa1073670:CDS | 45.0% | |
| GTAATGGTCATTGGTGGAGA+TGG | + | chr7_2:71313245-71313264 | Msa1073670:CDS | 45.0% | |
| ATTGGTGGAGATGGATACTG+TGG | + | chr7_2:71313254-71313273 | Msa1073670:CDS | 45.0% | |
| TGGAGATGGATACTGTGGTT+GGG | + | chr7_2:71313259-71313278 | Msa1073670:CDS | 45.0% | |
| ! | CGTCTTTTTGATCACCAGCT+TGG | + | chr7_2:71313344-71313363 | Msa1073670:CDS | 45.0% |
| TGAGAGAATCTAGTCCAAGC+TGG | - | chr7_2:71313361-71313380 | None:intergenic | 45.0% | |
| ! | CAGTGTTGGAAATCTCTCAC+TGG | + | chr7_2:71313410-71313429 | Msa1073670:CDS | 45.0% |
| ATCAGGCTCATAGGACTTGA+AGG | - | chr7_2:71313492-71313511 | None:intergenic | 45.0% | |
| CCTGATGCTGTTGTCCATTT+CGG | + | chr7_2:71313506-71313525 | Msa1073670:CDS | 45.0% | |
| CTGATGCTGTTGTCCATTTC+GGG | + | chr7_2:71313507-71313526 | Msa1073670:CDS | 45.0% | |
| TGATGCTGTTGTCCATTTCG+GGG | + | chr7_2:71313508-71313527 | Msa1073670:CDS | 45.0% | |
| GACCGGTCTATCATAGAGTA+AGG | - | chr7_2:71313548-71313567 | None:intergenic | 45.0% | |
| GTGTATACACAGCTCTTGAC+CGG | - | chr7_2:71313565-71313584 | None:intergenic | 45.0% | |
| TCTAGTCAAGCTTGGGACAA+TGG | + | chr7_2:71313652-71313671 | Msa1073670:CDS | 45.0% | |
| CTAGTCAAGCTTGGGACAAT+GGG | + | chr7_2:71313653-71313672 | Msa1073670:CDS | 45.0% | |
| CTTGGGACAATGGGTGAATA+CGG | + | chr7_2:71313662-71313681 | Msa1073670:CDS | 45.0% | |
| TTACCATCACTCACAACGGA+AGG | + | chr7_2:71313717-71313736 | Msa1073670:CDS | 45.0% | |
| !! | GAGCTAGCTTGCTTTGGATA+CGG | - | chr7_2:71313755-71313774 | None:intergenic | 45.0% |
| GCTTTCACTTGCAAAGCTTG+GGG | + | chr7_2:71313815-71313834 | Msa1073670:CDS | 45.0% | |
| CTTTCACTTGCAAAGCTTGG+GGG | + | chr7_2:71313816-71313835 | Msa1073670:CDS | 45.0% | |
| GGTCATCCACTCACTGTATA+TGG | + | chr7_2:71313983-71314002 | Msa1073670:CDS | 45.0% | |
| TGTATATGGTAAAGGAGGCC+AGG | + | chr7_2:71313997-71314016 | Msa1073670:CDS | 45.0% | |
| ! | CAAGGGATTGGTATGTTACC+TGG | - | chr7_2:71314018-71314037 | None:intergenic | 45.0% |
| ! | GTATTGGTGAGGCTTCTTAG+TGG | + | chr7_2:71314167-71314186 | Msa1073670:intron | 45.0% |
| AGGAACGGAGCAAAACATAG+GGG | - | chr7_2:71314855-71314874 | None:intergenic | 45.0% | |
| CTAGGAACGGAGCAAAACAT+AGG | - | chr7_2:71314857-71314876 | None:intergenic | 45.0% | |
| CGCGTACCCTTCAAAACTTT+AGG | + | chr7_2:71315159-71315178 | Msa1073670:intron | 45.0% | |
| TACGAAAGCTGGTGAGAAGT+TGG | + | chr7_2:71315592-71315611 | Msa1073670:CDS | 45.0% | |
| ACGAAAGCTGGTGAGAAGTT+GGG | + | chr7_2:71315593-71315612 | Msa1073670:CDS | 45.0% | |
| !! | TCTAGGGTTAGGCACTGATA+TGG | - | chr7_2:71315633-71315652 | None:intergenic | 45.0% |
| !! | TCTAACTCCACTCTAGGGTT+AGG | - | chr7_2:71315644-71315663 | None:intergenic | 45.0% |
| TAACCCTAGAGTGGAGTTAG+AGG | + | chr7_2:71315643-71315662 | Msa1073670:CDS | 45.0% | |
| TTGCGGTTCAGTACAAAGAC+CGG | + | chr7_2:71315759-71315778 | Msa1073670:CDS | 45.0% | |
| ACCTTTCTCCAAGAAACACC+AGG | - | chr7_2:71315806-71315825 | None:intergenic | 45.0% | |
| GGTGTTTCTTGGAGAAAGGT+TGG | + | chr7_2:71315806-71315825 | Msa1073670:CDS | 45.0% | |
| TTCATCCTAAGGTGTGTGCT+TGG | + | chr7_2:71315847-71315866 | Msa1073670:exon | 45.0% | |
| CTACGTACACATATGACTCG+AGG | - | chr7_2:71316049-71316068 | None:intergenic | 45.0% | |
| CTCGAGTCATATGTGTACGT+AGG | + | chr7_2:71316047-71316066 | Msa1073670:three_prime_UTR | 45.0% | |
| ! | GCCAGAACTAGTTTGAACCG+GGG | - | chr7_2:71313204-71313223 | None:intergenic | 50.0% |
| ! | CGCCAGAACTAGTTTGAACC+GGG | - | chr7_2:71313205-71313224 | None:intergenic | 50.0% |
| CCGAAGCGAGTAATGGTCAT+TGG | + | chr7_2:71313236-71313255 | Msa1073670:CDS | 50.0% | |
| GTGGAGATGGATACTGTGGT+TGG | + | chr7_2:71313258-71313277 | Msa1073670:CDS | 50.0% | |
| GCCCTCCACCTTTCTAACAA+AGG | + | chr7_2:71313287-71313306 | Msa1073670:CDS | 50.0% | |
| CACACCAATTTCCTCCATCC+AGG | + | chr7_2:71313379-71313398 | Msa1073670:CDS | 50.0% | |
| CGATCCTGGATGGAGGAAAT+TGG | - | chr7_2:71313386-71313405 | None:intergenic | 50.0% | |
| ACACTGAATGCGATCCTGGA+TGG | - | chr7_2:71313396-71313415 | None:intergenic | 50.0% | |
| TCCAGGATCGCATTCAGTGT+TGG | + | chr7_2:71313396-71313415 | Msa1073670:CDS | 50.0% | |
| TCCAACACTGAATGCGATCC+TGG | - | chr7_2:71313400-71313419 | None:intergenic | 50.0% | |
| GACAACAGCATCAGGCTCAT+AGG | - | chr7_2:71313501-71313520 | None:intergenic | 50.0% | |
| CCGAAATGGACAACAGCATC+AGG | - | chr7_2:71313509-71313528 | None:intergenic | 50.0% | |
| TGTCCTTCCGTTGTGAGTGA+TGG | - | chr7_2:71313723-71313742 | None:intergenic | 50.0% | |
| CTTGCAAAGCTTGGGGGATT+CGG | + | chr7_2:71313822-71313841 | Msa1073670:CDS | 50.0% | |
| TTGCAAAGCTTGGGGGATTC+GGG | + | chr7_2:71313823-71313842 | Msa1073670:CDS | 50.0% | |
| CGGGCAACTGATCTGAATCA+AGG | + | chr7_2:71313842-71313861 | Msa1073670:CDS | 50.0% | |
| TTCTGTGTTCAGGCTGCTGT+TGG | + | chr7_2:71313962-71313981 | Msa1073670:CDS | 50.0% | |
| TGAGCTTGCCATTGCAAACC+CGG | + | chr7_2:71315496-71315515 | Msa1073670:CDS | 50.0% | |
| TGAAGACTCGGAACTCTCCA+GGG | - | chr7_2:71315526-71315545 | None:intergenic | 50.0% | |
| TTGAAGACTCGGAACTCTCC+AGG | - | chr7_2:71315527-71315546 | None:intergenic | 50.0% | |
| !! | GCTGAGCTTGTTACGAAAGC+TGG | + | chr7_2:71315581-71315600 | Msa1073670:CDS | 50.0% |
| ATCAGTGCCTAACCCTAGAG+TGG | + | chr7_2:71315634-71315653 | Msa1073670:CDS | 50.0% | |
| GCTCCTCTAACTCCACTCTA+GGG | - | chr7_2:71315649-71315668 | None:intergenic | 50.0% | |
| TGCTCCTCTAACTCCACTCT+AGG | - | chr7_2:71315650-71315669 | None:intergenic | 50.0% | |
| TGCGGTTCAGTACAAAGACC+GGG | + | chr7_2:71315760-71315779 | Msa1073670:CDS | 50.0% | |
| GCCTGGTGTTTCTTGGAGAA+AGG | + | chr7_2:71315802-71315821 | Msa1073670:CDS | 50.0% | |
| TAGTTTGAACCGGGGCTTCC+TGG | - | chr7_2:71313196-71313215 | None:intergenic | 55.0% | |
| GCCCCGGTTCAAACTAGTTC+TGG | + | chr7_2:71313200-71313219 | Msa1073670:CDS | 55.0% | |
| CTGAATGCGATCCTGGATGG+AGG | - | chr7_2:71313393-71313412 | None:intergenic | 55.0% | |
| !! | AGGGTTAGCCGGGTTTGCAA+TGG | - | chr7_2:71315507-71315526 | None:intergenic | 55.0% |
| ATTGCAAACCCGGCTAACCC+TGG | + | chr7_2:71315506-71315525 | Msa1073670:CDS | 55.0% | |
| AGCAGCCAAGCACACACCTT+AGG | - | chr7_2:71315855-71315874 | None:intergenic | 55.0% | |
| TAAGGTGTGTGCTTGGCTGC+TGG | + | chr7_2:71315854-71315873 | Msa1073670:exon | 55.0% | |
| TTCAACTGGCCAGGAAGCCC+CGG | + | chr7_2:71313184-71313203 | Msa1073670:CDS | 60.0% | |
| CGGATCGCTGTTCCCCGAAA+TGG | - | chr7_2:71313523-71313542 | None:intergenic | 60.0% | |
| !! | GGAACTCTCCAGGGTTAGCC+GGG | - | chr7_2:71315517-71315536 | None:intergenic | 60.0% |
| ! | CGGAACTCTCCAGGGTTAGC+CGG | - | chr7_2:71315518-71315537 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 71312114 | 71316247 | 71312114 | ID=Msa1073670;Name=Msa1073670 |
| chr7_2 | mRNA | 71312114 | 71316247 | 71312114 | ID=Msa1073670-mRNA-1;Parent=Msa1073670;Name=Msa1073670-mRNA-1;_AED=0.10;_eAED=0.10;_QI=215|1|1|1|0.5|0.33|3|391|477 |
| chr7_2 | exon | 71312114 | 71312290 | 71312114 | ID=Msa1073670-mRNA-1:exon:16134;Parent=Msa1073670-mRNA-1 |
| chr7_2 | exon | 71312949 | 71314018 | 71312949 | ID=Msa1073670-mRNA-1:exon:16135;Parent=Msa1073670-mRNA-1 |
| chr7_2 | exon | 71315455 | 71316247 | 71315455 | ID=Msa1073670-mRNA-1:exon:16136;Parent=Msa1073670-mRNA-1 |
| chr7_2 | five_prime_UTR | 71312114 | 71312290 | 71312114 | ID=Msa1073670-mRNA-1:five_prime_utr;Parent=Msa1073670-mRNA-1 |
| chr7_2 | five_prime_UTR | 71312949 | 71312986 | 71312949 | ID=Msa1073670-mRNA-1:five_prime_utr;Parent=Msa1073670-mRNA-1 |
| chr7_2 | CDS | 71312987 | 71314018 | 71312987 | ID=Msa1073670-mRNA-1:cds;Parent=Msa1073670-mRNA-1 |
| chr7_2 | CDS | 71315455 | 71315856 | 71315455 | ID=Msa1073670-mRNA-1:cds;Parent=Msa1073670-mRNA-1 |
| chr7_2 | three_prime_UTR | 71315857 | 71316247 | 71315857 | ID=Msa1073670-mRNA-1:three_prime_utr;Parent=Msa1073670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
