AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1033930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033930 MtrunA17_Chr7g0256891 96.923 650 20 0 1 650 1 650 0.0 1317
Msa1033930 MtrunA17_Chr2g0286541 26.020 196 138 2 449 639 930 1123 1.59e-14 77.4
Msa1033930 MtrunA17_Chr7g0268571 24.038 208 150 3 449 650 729 934 1.16e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1033930 AT2G41450.1 47.289 664 281 12 1 647 1 612 0.0 573
Msa1033930 AT2G41450.2 49.073 593 244 8 68 647 2 549 0.0 546
Msa1033930 AT4G03130.2 28.293 205 129 7 449 644 566 761 1.57e-15 80.9
Msa1033930 AT4G03130.1 28.293 205 129 7 449 644 562 757 1.58e-15 80.9
Msa1033930 AT4G03130.3 30.986 142 87 5 449 586 566 700 6.46e-11 66.2

Find 117 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCCCCATTCTTTGTTTA+AGG 0.153944 7_1:-69342211 Msa1033930:CDS
ACAAAGAATCTGAAGGATTT+TGG 0.192159 7_1:-69345553 Msa1033930:CDS
TTCTGTACTGCTCTCTGTTC+CGG 0.211542 7_1:-69343602 Msa1033930:CDS
TCCAGTTTGGCTGGAGATTC+AGG 0.213380 7_1:-69346753 Msa1033930:CDS
CTGATAAGGACTCTGCAAAT+TGG 0.274898 7_1:+69340938 None:intergenic
CAAACAATTCCTTCTTTAGA+TGG 0.275506 7_1:+69344838 None:intergenic
GTAATATCATCATCATCTTT+AGG 0.278251 7_1:+69347152 None:intergenic
TTTGACTTGTGTCTGTTCTA+TGG 0.278979 7_1:+69344691 None:intergenic
CGTAAAGCATTATGCTTTCC+TGG 0.295086 7_1:-69344882 Msa1033930:CDS
GTGTCATTGCAGCAGTTCTT+AGG 0.300365 7_1:+69344435 None:intergenic
AAGAAACTTTGATTGCTTTC+CGG 0.309803 7_1:+69346944 None:intergenic
GTTGATATCCTGCAGGGTTT+TGG 0.322827 7_1:-69345647 Msa1033930:intron
CTAAAGCATTGTTCAGTTGA+TGG 0.343270 7_1:+69344078 None:intergenic
TCTGTACTGCTCTCTGTTCC+GGG 0.344750 7_1:-69343601 Msa1033930:intron
TGTCCCCATTCTTTGTTTAA+GGG 0.350626 7_1:-69342210 Msa1033930:CDS
GATTAAGAGTTCGTTGGAAC+TGG 0.354030 7_1:+69347477 None:intergenic
TTCGTTGGAACTGGAATTGC+AGG 0.354681 7_1:+69347486 None:intergenic
TCCTGAATCTCCAGCCAAAC+TGG 0.360192 7_1:+69346752 None:intergenic
AGCGGAAATATCAAAGTATC+TGG 0.362853 7_1:-69347442 Msa1033930:intron
CCCAATGCTTTGGTAAAAGT+TGG 0.376995 7_1:-69344663 Msa1033930:CDS
CACTACCTGAAGGTATGATT+TGG 0.384485 7_1:+69347130 None:intergenic
TTCTTGTATTAGGTTATTAG+TGG 0.388331 7_1:-69341117 Msa1033930:intron
TTATTTGTTGAAGTATAAAT+CGG 0.396914 7_1:-69342265 Msa1033930:CDS
TCTGCTATTGTTAGGTCTGC+TGG 0.410098 7_1:-69342138 Msa1033930:CDS
TATAACCCTTAAACAAAGAA+TGG 0.415431 7_1:+69342205 None:intergenic
ACTACTTCTGAAATCCAGTT+TGG 0.417176 7_1:-69346766 Msa1033930:CDS
TTGAGAGATGTGTGACTAAT+GGG 0.419347 7_1:-69346923 Msa1033930:intron
AAACTCTGTCTGCTATTGTT+AGG 0.420715 7_1:-69342146 Msa1033930:CDS
TGATAAGGACTCTGCAAATT+GGG 0.421166 7_1:+69340939 None:intergenic
ATGAATTATGCTGCAAATAC+CGG 0.424682 7_1:-69346963 Msa1033930:CDS
TGGCTGCAAAGAAAGGTATA+AGG 0.425240 7_1:-69341023 Msa1033930:CDS
CTTGAGAGATGTGTGACTAA+TGG 0.429713 7_1:-69346924 Msa1033930:CDS
TTGTCTGTCATCATTTGCTC+TGG 0.434845 7_1:+69344401 None:intergenic
ACTGTCGATCAGATTCTAGC+TGG 0.443148 7_1:-69344236 Msa1033930:CDS
TTCAACAATTGCAGGTGTAA+AGG 0.444936 7_1:+69344764 None:intergenic
ACCTCACATTCTGAATGATA+AGG 0.445474 7_1:-69342289 Msa1033930:CDS
TTGACTTGTGTCTGTTCTAT+GGG 0.445981 7_1:+69344692 None:intergenic
TTTCGACAAGGCAGATTTGT+TGG 0.448692 7_1:-69342396 Msa1033930:intron
ATAACCCTTAAACAAAGAAT+GGG 0.449312 7_1:+69342206 None:intergenic
TCTGCATATTCTGTGTCTGC+AGG 0.453750 7_1:+69346204 None:intergenic
CGAGGATGAAGAGGCTTCCC+AGG 0.455925 7_1:+69344296 None:intergenic
TCAAAGTAAACCCAATGCTT+TGG 0.461826 7_1:-69344673 Msa1033930:CDS
CTTCTGAAATCCAGTTTGGC+TGG 0.468826 7_1:-69346762 Msa1033930:CDS
TTGTTAACTACACAGTGCTT+GGG 0.469784 7_1:-69342448 Msa1033930:intron
CTGATCGACAGTCAACAAAC+TGG 0.471082 7_1:+69344247 None:intergenic
TTTGATGACAATGCTAACTC+TGG 0.474813 7_1:-69344819 Msa1033930:CDS
TCGGAGCTTCTAAATGCATA+TGG 0.479623 7_1:+69344115 None:intergenic
AAGAGAGATTAAGAGTTCGT+TGG 0.488220 7_1:+69347471 None:intergenic
AGATATTGTTTCTAGAGCTC+CGG 0.491665 7_1:-69345622 Msa1033930:CDS
AGATTCACCGATGAAGATTG+AGG 0.494644 7_1:+69347634 None:intergenic
GGCATGTTAACAATCTGATA+AGG 0.498089 7_1:+69340924 None:intergenic
CATGATTCTCCATCTAAAGA+AGG 0.505386 7_1:-69344847 Msa1033930:CDS
CTGTCGATCAGATTCTAGCT+GGG 0.506118 7_1:-69344235 Msa1033930:CDS
AGACATTGAAGAAGCAATGA+TGG 0.507527 7_1:-69341043 Msa1033930:CDS
GAATTCTGATGAGGCTGTGA+GGG 0.507711 7_1:+69344786 None:intergenic
ATGTATATGACTGAGCTACC+TGG 0.508901 7_1:-69346987 Msa1033930:CDS
CTTGGGTGGTCTCATCGACT+TGG 0.511542 7_1:-69342431 Msa1033930:CDS
GCAATGATGGCTGCAAAGAA+AGG 0.515441 7_1:-69341030 Msa1033930:CDS
TATTACCAAATCATACCTTC+AGG 0.525549 7_1:-69347135 Msa1033930:intron
GGTGAAAGTGCTGGCTTCGA+CGG 0.539139 7_1:+69347507 None:intergenic
AGGATTGGCCCTACCAGCCT+CGG 0.539403 7_1:+69344203 None:intergenic
CGGAAGAGACTTCAAAATGT+TGG 0.539655 7_1:-69345602 Msa1033930:CDS
GTTGGATCTTCACGAGGACG+TGG 0.542047 7_1:-69344645 Msa1033930:CDS
GGATTCCGCAGAACAAGGAT+TGG 0.544036 7_1:+69344188 None:intergenic
ATAGCACAGGTGGATACAAA+AGG 0.544150 7_1:-69344939 Msa1033930:CDS
TGACTTCAACGAGGATGAAG+AGG 0.545463 7_1:+69344287 None:intergenic
GGTGGAACTATTGCCTCTGA+TGG 0.550900 7_1:-69343674 Msa1033930:CDS
CGAGGACGTGGAAAACTCAA+TGG 0.557908 7_1:-69344633 Msa1033930:intron
TAATTGAAGTATCACAATGA+GGG 0.558462 7_1:+69344166 None:intergenic
CGTAGAACACGAGTTCATGC+TGG 0.559561 7_1:-69347180 Msa1033930:intron
AATGATGACAGACAAGCAAA+TGG 0.562041 7_1:-69344393 Msa1033930:CDS
AAACATTCCTCAATCTTCAT+CGG 0.570166 7_1:-69347641 Msa1033930:intron
GGAATTGCAGGTGAAAGTGC+TGG 0.574962 7_1:+69347498 None:intergenic
ATACAAAAGGTAGAGCCCGC+AGG 0.578945 7_1:-69344926 Msa1033930:CDS
TGAGGGGATTCCGCAGAACA+AGG 0.583621 7_1:+69344183 None:intergenic
CTGCATATTCTGTGTCTGCA+GGG 0.585523 7_1:+69346205 None:intergenic
TTTGCAGCATAATTCATCCC+AGG 0.585813 7_1:+69346969 None:intergenic
TAAGGACTTTCGACAGTGAG+TGG 0.588593 7_1:-69341005 Msa1033930:CDS
TTAACTACACAGTGCTTGGG+TGG 0.593202 7_1:-69342445 Msa1033930:intron
AATTTCACTCCTGAAGAAAG+AGG 0.594165 7_1:-69347294 Msa1033930:intron
TGTGGTTGAGCTTCCATCAG+AGG 0.594722 7_1:+69343661 None:intergenic
TCCTTATCATTCAGAATGTG+AGG 0.599269 7_1:+69342288 None:intergenic
CGTTGAAGTCAAAGAGAGTG+AGG 0.602805 7_1:-69344275 Msa1033930:CDS
TCAACCACACATGTTGTCAC+AGG 0.605648 7_1:-69343647 Msa1033930:CDS
TAAGAAAACACAGCTTACAA+AGG 0.606148 7_1:-69344025 Msa1033930:intron
TGTCGATCAGATTCTAGCTG+GGG 0.610722 7_1:-69344234 Msa1033930:CDS
TGTATATGACTGAGCTACCT+GGG 0.612382 7_1:-69346986 Msa1033930:CDS
TTGATGACAATGCTAACTCT+GGG 0.616144 7_1:-69344818 Msa1033930:CDS
CATGAGACAAGAGCTCGACA+TGG 0.620599 7_1:-69340968 Msa1033930:CDS
TTGAAGTCAAAGAGAGTGAG+GGG 0.624778 7_1:-69344273 Msa1033930:CDS
GTAATTGAAGTATCACAATG+AGG 0.625076 7_1:+69344165 None:intergenic
AATTGAAGTATCACAATGAG+GGG 0.625488 7_1:+69344167 None:intergenic
TGGGGAGACAAAGAATCTGA+AGG 0.626446 7_1:-69345560 Msa1033930:CDS
CAGAGGCAATAGTTCCACCT+AGG 0.629274 7_1:+69343678 None:intergenic
GTTGAAGTCAAAGAGAGTGA+GGG 0.634453 7_1:-69344274 Msa1033930:CDS
CAATGCAATCTATCAACGGA+AGG 0.636176 7_1:-69346163 Msa1033930:intron
CTGTCAATGCAATCTATCAA+CGG 0.636846 7_1:-69346167 Msa1033930:CDS
ATTGCATTGACAGCTGCAAG+TGG 0.637300 7_1:+69346177 None:intergenic
ATCATGAGAGTCGAACCACC+AGG 0.638186 7_1:+69344864 None:intergenic
GGAATTCTGATGAGGCTGTG+AGG 0.653417 7_1:+69344785 None:intergenic
TTGCATTGACAGCTGCAAGT+GGG 0.654261 7_1:+69346178 None:intergenic
TAGGGCCAATCCTTGTTCTG+CGG 0.655927 7_1:-69344193 Msa1033930:CDS
AATTCTGATGAGGCTGTGAG+GGG 0.660055 7_1:+69344787 None:intergenic
TTTGGCTGGAGATTCAGGAA+AGG 0.669858 7_1:-69346748 Msa1033930:intron
ATATAGGTGATTGAAGACCT+AGG 0.671284 7_1:-69343695 Msa1033930:intron
AAATGGTGCAGATTGTACCC+AGG 0.675885 7_1:-69344376 Msa1033930:CDS
AAAGCATTATGCTTTCCTGG+TGG 0.677104 7_1:-69344879 Msa1033930:CDS
GTAAAAGTTGGATCTTCACG+AGG 0.678966 7_1:-69344651 Msa1033930:CDS
TTAATCTCTCTTCCTCGTAG+CGG 0.679130 7_1:-69347460 Msa1033930:CDS
TTGTCCTGTGACAACATGTG+TGG 0.679152 7_1:+69343643 None:intergenic
TAAGGACTCTGCAAATTGGG+AGG 0.680636 7_1:+69340942 None:intergenic
GCTATTGTTAGGTCTGCTGG+TGG 0.684582 7_1:-69342135 Msa1033930:CDS
TAACCCTTAAACAAAGAATG+GGG 0.687115 7_1:+69342207 None:intergenic
CACTCTCTTTGACTTCAACG+AGG 0.710470 7_1:+69344278 None:intergenic
GGTGTAAAGGAATTCTGATG+AGG 0.724005 7_1:+69344777 None:intergenic
ACTTTGATATTTCCGCTACG+AGG 0.724866 7_1:+69347448 None:intergenic
TAGGTGATTGAAGACCTAGG+TGG 0.771557 7_1:-69343692 Msa1033930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTATTTATTTTTATAT+TGG - chr7_1:69346719-69346738 Msa1033930:intron 0.0%
!!! TATTTATTTATTTTTATATT+GGG - chr7_1:69346720-69346739 Msa1033930:intron 0.0%
!! AAAAAAAAAAAACTTAAAAC+TGG + chr7_1:69342487-69342506 None:intergenic 10.0%
!!! TAAATTTGAAATTGAAAAAT+TGG + chr7_1:69345418-69345437 None:intergenic 10.0%
!! TAAAAAATAAGTATCAATAT+TGG - chr7_1:69345613-69345632 Msa1033930:CDS 10.0%
!! GTTCAATATAAAATTATAAA+TGG + chr7_1:69345775-69345794 None:intergenic 10.0%
!!! TTATAATTTTATATTGAACT+AGG - chr7_1:69345776-69345795 Msa1033930:intron 10.0%
!!! TATAATTTTATATTGAACTA+GGG - chr7_1:69345777-69345796 Msa1033930:intron 10.0%
!! GATTATTTATAATTATAACA+AGG - chr7_1:69346117-69346136 Msa1033930:intron 10.0%
!! AAAAAATTGTTAATCGTTAA+TGG + chr7_1:69341228-69341247 None:intergenic 15.0%
!!! TTTTTTAAATTTGAAATGTC+AGG - chr7_1:69342508-69342527 Msa1033930:intron 15.0%
!!! TTTTAACAAAAAAAAATCTC+TGG - chr7_1:69343078-69343097 Msa1033930:intron 15.0%
!! TTTAGAAAATAATCTCAATT+TGG + chr7_1:69344019-69344038 None:intergenic 15.0%
!!! TCTAAATTAATATTTTTTGC+TGG - chr7_1:69344033-69344052 Msa1033930:CDS 15.0%
!!! AAAATTTTATCATGACTATT+TGG - chr7_1:69344068-69344087 Msa1033930:CDS 15.0%
!!! AAAGCATTTAAAAAATACAT+GGG + chr7_1:69344605-69344624 None:intergenic 15.0%
!!! TAAAGCATTTAAAAAATACA+TGG + chr7_1:69344606-69344625 None:intergenic 15.0%
!! ACAAATTTCAGTTTAAATTT+AGG + chr7_1:69345048-69345067 None:intergenic 15.0%
!!! TCTTGGTTTAAATAAATTTT+TGG - chr7_1:69345129-69345148 Msa1033930:intron 15.0%
!!! TATCGATTTGTAATTTATAA+AGG - chr7_1:69345244-69345263 Msa1033930:intron 15.0%
!!! ATCGATTTGTAATTTATAAA+GGG - chr7_1:69345245-69345264 Msa1033930:intron 15.0%
!!! ACTTATTTAACTTGATTAAA+AGG + chr7_1:69345594-69345613 None:intergenic 15.0%
!!! TTATTTGTTGAAGTATAAAT+CGG - chr7_1:69346328-69346347 Msa1033930:intron 15.0%
!! ATCAAAAACTATTAGATTAT+AGG + chr7_1:69346926-69346945 None:intergenic 15.0%
!!! AATCTAATAGTTTTTGATAT+TGG - chr7_1:69346928-69346947 Msa1033930:CDS 15.0%
!! CATTAAATAAACATACTATA+TGG + chr7_1:69347359-69347378 None:intergenic 15.0%
!! AAGAATATCGTGTAAAATTA+GGG + chr7_1:69341330-69341349 None:intergenic 20.0%
!! AAAGAATATCGTGTAAAATT+AGG + chr7_1:69341331-69341350 None:intergenic 20.0%
!! TGAATAAACATGAATAACAA+CGG + chr7_1:69341505-69341524 None:intergenic 20.0%
!!! ATGTTTATGACTTCATATTT+TGG - chr7_1:69341911-69341930 Msa1033930:intron 20.0%
!! AACTTAAAACTGGAATATAA+AGG + chr7_1:69342477-69342496 None:intergenic 20.0%
!! CAATAAATAGCTATAATCTA+TGG - chr7_1:69342893-69342912 Msa1033930:intron 20.0%
!! ATTCTAAACTAAAAAATGAG+TGG + chr7_1:69343369-69343388 None:intergenic 20.0%
!!! TAAAATATGCTTCTTTTGTT+TGG - chr7_1:69343568-69343587 Msa1033930:intron 20.0%
!!! AAAATATGCTTCTTTTGTTT+GGG - chr7_1:69343569-69343588 Msa1033930:intron 20.0%
!!! AATCTACAAAAGTTTTAAAG+AGG - chr7_1:69344273-69344292 Msa1033930:CDS 20.0%
!!! ATCTACAAAAGTTTTAAAGA+GGG - chr7_1:69344274-69344293 Msa1033930:CDS 20.0%
!! GATCTACAAAAAGAAAAATT+AGG + chr7_1:69344826-69344845 None:intergenic 20.0%
!!! TAGAGATTTGTTTTACATAT+AGG - chr7_1:69344882-69344901 Msa1033930:CDS 20.0%
!! ATTTGTTTATAGTTGAAATC+AGG - chr7_1:69345062-69345081 Msa1033930:intron 20.0%
!! ATTCATAACAATAGAGATTA+GGG + chr7_1:69345165-69345184 None:intergenic 20.0%
!! AATTCATAACAATAGAGATT+AGG + chr7_1:69345166-69345185 None:intergenic 20.0%
!! AATATCTTCAATTCAAAGTA+TGG + chr7_1:69345469-69345488 None:intergenic 20.0%
!! AAGATATTCTTTAATCTTGT+TGG - chr7_1:69345481-69345500 Msa1033930:intron 20.0%
!! AATTGGTAGATGATATAAAT+TGG + chr7_1:69345548-69345567 None:intergenic 20.0%
!!! ATCTACCAATTTATTGTTTT+TGG - chr7_1:69345557-69345576 Msa1033930:CDS 20.0%
!! TAAGTATCAATATTGGAAAT+TGG - chr7_1:69345620-69345639 Msa1033930:CDS 20.0%
!! TTGAATATGAAATAATGTCA+TGG + chr7_1:69345928-69345947 None:intergenic 20.0%
!!! TTTGTTTTGATTATCTTTCT+AGG + chr7_1:69346006-69346025 None:intergenic 20.0%
!! TACTAACACAATCTTAAAAA+TGG - chr7_1:69346266-69346285 Msa1033930:intron 20.0%
!!! TGTAAGTTCTATTATTTTTC+TGG - chr7_1:69346484-69346503 Msa1033930:intron 20.0%
!!! ACCTGTATAAGTTTTTTTAA+GGG + chr7_1:69346527-69346546 None:intergenic 20.0%
!!! TACCTGTATAAGTTTTTTTA+AGG + chr7_1:69346528-69346547 None:intergenic 20.0%
!! ACATATGAATAGATATAGAA+CGG + chr7_1:69347001-69347020 None:intergenic 20.0%
!!! AATTAATGAAACTTGTTAAC+CGG + chr7_1:69347458-69347477 None:intergenic 20.0%
!! GTTTCATTAATTCTTGTATT+AGG - chr7_1:69347466-69347485 Msa1033930:CDS 20.0%
!! ATTGAGGAATGTTTTCTTTT+TGG + chr7_1:69340946-69340965 None:intergenic 25.0%
! ATGAAGTAGTGAATGAAAAA+GGG + chr7_1:69341012-69341031 None:intergenic 25.0%
! AATGAAGTAGTGAATGAAAA+AGG + chr7_1:69341013-69341032 None:intergenic 25.0%
!! CTATATTCTTTTCATTTCTC+AGG - chr7_1:69341049-69341068 Msa1033930:CDS 25.0%
! GTAATATCATCATCATCTTT+AGG + chr7_1:69341444-69341463 None:intergenic 25.0%
!! ATGCTTTGAATGTAAATTGT+TGG - chr7_1:69341563-69341582 Msa1033930:intron 25.0%
!! TGCTTTGAATGTAAATTGTT+GGG - chr7_1:69341564-69341583 Msa1033930:intron 25.0%
!! ACTATACTTCTGTTTTGTAT+TGG - chr7_1:69341882-69341901 Msa1033930:intron 25.0%
! ATAGTGCATTAGGTTATTTA+TGG + chr7_1:69341952-69341971 None:intergenic 25.0%
!!! GTTTTCTTTTATTTCTAAGC+CGG + chr7_1:69342211-69342230 None:intergenic 25.0%
! TTCATGAAATAAACTTGCAA+TGG - chr7_1:69342543-69342562 Msa1033930:intron 25.0%
! ACATTTAGTGAAAACATACA+CGG - chr7_1:69342726-69342745 Msa1033930:intron 25.0%
!!! TTATAGACTTTAGAAGTATC+TGG - chr7_1:69343236-69343255 Msa1033930:intron 25.0%
!! ATAATCTCAATTTGGAGTAT+GGG + chr7_1:69344011-69344030 None:intergenic 25.0%
!! AATAATCTCAATTTGGAGTA+TGG + chr7_1:69344012-69344031 None:intergenic 25.0%
!! ATTAGCATAATTTTCATCCT+GGG + chr7_1:69344237-69344256 None:intergenic 25.0%
!! TATTAGCATAATTTTCATCC+TGG + chr7_1:69344238-69344257 None:intergenic 25.0%
!! TAATTGAAGTATCACAATGA+GGG + chr7_1:69344430-69344449 None:intergenic 25.0%
!! AAGAACTCTGAAAAATGTAT+TGG - chr7_1:69344452-69344471 Msa1033930:CDS 25.0%
! AGATGGTAGGAAAAATAATA+GGG - chr7_1:69344784-69344803 Msa1033930:CDS 25.0%
!! ATTTTTCTTTTTGTAGATCC+TGG - chr7_1:69344827-69344846 Msa1033930:CDS 25.0%
! CAAAATTTAAATCAATTGCC+AGG + chr7_1:69344848-69344867 None:intergenic 25.0%
!!! CTGGCAATTGATTTAAATTT+TGG - chr7_1:69344846-69344865 Msa1033930:CDS 25.0%
! TTCATAACAATAGAGATTAG+GGG + chr7_1:69345164-69345183 None:intergenic 25.0%
!!! GATTGTAAGTTAGCTTTAAA+TGG + chr7_1:69345285-69345304 None:intergenic 25.0%
! TTTGCAATAAATAATGACTC+TGG + chr7_1:69345312-69345331 None:intergenic 25.0%
!! TTTAAGAACTATTTGAGGTT+CGG - chr7_1:69345381-69345400 Msa1033930:intron 25.0%
! AACTTGATTAAAAGGAGTAA+TGG + chr7_1:69345586-69345605 None:intergenic 25.0%
! ACTGAATAAGTAACTAGTTA+AGG - chr7_1:69345749-69345768 Msa1033930:intron 25.0%
!!! ACCTTTTTTCTGATGATTAA+TGG - chr7_1:69345843-69345862 Msa1033930:intron 25.0%
! AAAAAGGATTCATTTGAAAG+CGG + chr7_1:69345869-69345888 None:intergenic 25.0%
!! TTAAAAGAAAGTTTTCGACA+AGG - chr7_1:69346185-69346204 Msa1033930:CDS 25.0%
! ATAACCCTTAAACAAAGAAT+GGG + chr7_1:69346390-69346409 None:intergenic 25.0%
! TATAACCCTTAAACAAAGAA+TGG + chr7_1:69346391-69346410 None:intergenic 25.0%
!!! TGTATAAGTTTTTTTAAGGG+AGG + chr7_1:69346524-69346543 None:intergenic 25.0%
! TCCCTTAAAAAAACTTATAC+AGG - chr7_1:69346523-69346542 Msa1033930:intron 25.0%
! TGGTTTAAAGAATCCTAATT+TGG - chr7_1:69346816-69346835 Msa1033930:intron 25.0%
! AGTATATACATCTCCAAATT+AGG + chr7_1:69346832-69346851 None:intergenic 25.0%
! TCTGTGCAATTAAAATCTAA+AGG - chr7_1:69346882-69346901 Msa1033930:intron 25.0%
! AACAAATAATGACAAATGCT+AGG - chr7_1:69347146-69347165 Msa1033930:CDS 25.0%
! ACAAATAATGACAAATGCTA+GGG - chr7_1:69347147-69347166 Msa1033930:CDS 25.0%
! AAAGTACATGTTTAGCATAA+AGG + chr7_1:69347241-69347260 None:intergenic 25.0%
! ATAAACATACTATATGGACA+TGG + chr7_1:69347353-69347372 None:intergenic 25.0%
! TTCTTGTATTAGGTTATTAG+TGG - chr7_1:69347476-69347495 Msa1033930:CDS 25.0%
AAACATTCCTCAATCTTCAT+CGG - chr7_1:69340952-69340971 Msa1033930:CDS 30.0%
TGAAGTAGTGAATGAAAAAG+GGG + chr7_1:69341011-69341030 None:intergenic 30.0%
! CAAATAGAAGCGTAGTTAAT+TGG + chr7_1:69341192-69341211 None:intergenic 30.0%
TGATTATAATGCTTGCTCTT+GGG - chr7_1:69341380-69341399 Msa1033930:intron 30.0%
TATTACCAAATCATACCTTC+AGG - chr7_1:69341458-69341477 Msa1033930:intron 30.0%
ATGTAAATTGTTGGGTTTAC+AGG - chr7_1:69341572-69341591 Msa1033930:intron 30.0%
ATGAATTATGCTGCAAATAC+CGG - chr7_1:69341630-69341649 Msa1033930:intron 30.0%
AAGAAACTTTGATTGCTTTC+CGG + chr7_1:69341652-69341671 None:intergenic 30.0%
AGTTAGAGTAATATCTGACA+CGG + chr7_1:69341742-69341761 None:intergenic 30.0%
GTCAGATATTACTCTAACTA+TGG - chr7_1:69341743-69341762 Msa1033930:intron 30.0%
! AAAACAGAAGTATAGTCATC+AGG + chr7_1:69341878-69341897 None:intergenic 30.0%
ATGTACTAAGATAGTGCATT+AGG + chr7_1:69341962-69341981 None:intergenic 30.0%
AGTATCAGCAGATATCAATT+AGG + chr7_1:69342157-69342176 None:intergenic 30.0%
TTAGCCTCTTAGAATGAAAA+GGG + chr7_1:69342182-69342201 None:intergenic 30.0%
AATGCATAGCAGTAAACATA+AGG - chr7_1:69342269-69342288 Msa1033930:CDS 30.0%
ATGCATAGCAGTAAACATAA+GGG - chr7_1:69342270-69342289 Msa1033930:CDS 30.0%
! ATCCACTTTCATCATTTTAC+AGG - chr7_1:69342337-69342356 Msa1033930:intron 30.0%
AACCTGTAAAATGATGAAAG+TGG + chr7_1:69342342-69342361 None:intergenic 30.0%
! TAAATTTGAAATGTCAGGTC+TGG - chr7_1:69342513-69342532 Msa1033930:intron 30.0%
ACTGAGAATACTTATCATGA+AGG + chr7_1:69342687-69342706 None:intergenic 30.0%
! GTCTTTTTACATACGTTGAT+AGG - chr7_1:69342864-69342883 Msa1033930:intron 30.0%
! ACAAAGAATCTGAAGGATTT+TGG - chr7_1:69343040-69343059 Msa1033930:intron 30.0%
AGGTCTATAGACTTAATGAA+AGG - chr7_1:69343166-69343185 Msa1033930:intron 30.0%
ATCTGGATTATACTGTGAAT+TGG - chr7_1:69343253-69343272 Msa1033930:intron 30.0%
TGGTCTATAGACTTAATGAA+AGG + chr7_1:69343497-69343516 None:intergenic 30.0%
!! GATCTGAATTCTGAAATCTT+TGG + chr7_1:69343517-69343536 None:intergenic 30.0%
! TTTTATTCGACCAAAAATGC+AGG - chr7_1:69343620-69343639 Msa1033930:CDS 30.0%
TTTATTCGACCAAAAATGCA+GGG - chr7_1:69343621-69343640 Msa1033930:CDS 30.0%
! TTACGAATATCAGCTTTTAC+AGG + chr7_1:69343696-69343715 None:intergenic 30.0%
CAAACAATTCCTTCTTTAGA+TGG + chr7_1:69343758-69343777 None:intergenic 30.0%
! AATTGAAGTATCACAATGAG+GGG + chr7_1:69344429-69344448 None:intergenic 30.0%
! GTAATTGAAGTATCACAATG+AGG + chr7_1:69344431-69344450 None:intergenic 30.0%
TAAGAAAACACAGCTTACAA+AGG - chr7_1:69344568-69344587 Msa1033930:intron 30.0%
!! AAAAGAGTGTTACATTCGAA+AGG + chr7_1:69344746-69344765 None:intergenic 30.0%
! TCGAATGTAACACTCTTTTT+AGG - chr7_1:69344747-69344766 Msa1033930:CDS 30.0%
! CGAATGTAACACTCTTTTTA+GGG - chr7_1:69344748-69344767 Msa1033930:CDS 30.0%
CAGATGGTAGGAAAAATAAT+AGG - chr7_1:69344783-69344802 Msa1033930:CDS 30.0%
GATGGTAGGAAAAATAATAG+GGG - chr7_1:69344785-69344804 Msa1033930:CDS 30.0%
ATTAGAATCTTAGCATCTCT+TGG - chr7_1:69345112-69345131 Msa1033930:intron 30.0%
! TTTTCCTCAAAATTTCAGTC+TGG - chr7_1:69345355-69345374 Msa1033930:intron 30.0%
GGTCATTTAAGAACTATTTG+AGG - chr7_1:69345376-69345395 Msa1033930:intron 30.0%
GGACACCAAAAACAATAAAT+TGG + chr7_1:69345565-69345584 None:intergenic 30.0%
AATATTGGAAATTGGAGTGT+TGG - chr7_1:69345628-69345647 Msa1033930:CDS 30.0%
GTATCCATCTTCATACTTAT+TGG + chr7_1:69345809-69345828 None:intergenic 30.0%
GCCATTAATCATCAGAAAAA+AGG + chr7_1:69345847-69345866 None:intergenic 30.0%
!!! GAATCCTTTTTTTTTCTCTG+TGG - chr7_1:69345878-69345897 Msa1033930:intron 30.0%
GATACCACAGAGAAAAAAAA+AGG + chr7_1:69345885-69345904 None:intergenic 30.0%
! GTTTTGCATTTTACCAAGTT+GGG + chr7_1:69345958-69345977 None:intergenic 30.0%
! TGTTTTGCATTTTACCAAGT+TGG + chr7_1:69345959-69345978 None:intergenic 30.0%
AGGATCAATTAATCATCCAA+AGG + chr7_1:69345986-69346005 None:intergenic 30.0%
AATGTGTACATGTAAGAATG+TGG + chr7_1:69346092-69346111 None:intergenic 30.0%
TCAATGTAGACAAGAAAGTT+TGG + chr7_1:69346232-69346251 None:intergenic 30.0%
TCTACATTGAGTTATTGTTC+CGG - chr7_1:69346242-69346261 Msa1033930:intron 30.0%
! TTTAAGATTGTGTTAGTAGC+CGG + chr7_1:69346264-69346283 None:intergenic 30.0%
TAACCCTTAAACAAAGAATG+GGG + chr7_1:69346389-69346408 None:intergenic 30.0%
ATACATTAGCCATAGATGAA+AGG + chr7_1:69346555-69346574 None:intergenic 30.0%
! GTGCTAAAAGTACAAAGTAT+TGG - chr7_1:69346777-69346796 Msa1033930:CDS 30.0%
TTGGAACGCAAGTAATTAAA+TGG - chr7_1:69346796-69346815 Msa1033930:intron 30.0%
! TGTTTAACAATAGTGTTGCT+AGG - chr7_1:69346851-69346870 Msa1033930:intron 30.0%
! GTTTAACAATAGTGTTGCTA+GGG - chr7_1:69346852-69346871 Msa1033930:intron 30.0%
! TTTAACAATAGTGTTGCTAG+GGG - chr7_1:69346853-69346872 Msa1033930:intron 30.0%
ATGAATAGATATAGAACGGA+GGG + chr7_1:69346997-69347016 None:intergenic 30.0%
TATGAATAGATATAGAACGG+AGG + chr7_1:69346998-69347017 None:intergenic 30.0%
ACTTCTAGTCTGAAAATTCA+TGG - chr7_1:69347048-69347067 Msa1033930:intron 30.0%
!!! TTCTGTACTATACCCTTTTT+TGG - chr7_1:69347099-69347118 Msa1033930:intron 30.0%
!!! TCTGTACTATACCCTTTTTT+GGG - chr7_1:69347100-69347119 Msa1033930:intron 30.0%
TAATCATTTATGATGCACCT+TGG - chr7_1:69347307-69347326 Msa1033930:CDS 30.0%
! GGTGAAATGAAGGGTTTTTA+GGG + chr7_1:69340990-69341009 None:intergenic 35.0%
TGAAAAAGGGGTGAAATGAA+GGG + chr7_1:69340999-69341018 None:intergenic 35.0%
ATGAAAAAGGGGTGAAATGA+AGG + chr7_1:69341000-69341019 None:intergenic 35.0%
AAGAGAGATTAAGAGTTCGT+TGG + chr7_1:69341125-69341144 None:intergenic 35.0%
! AGCGGAAATATCAAAGTATC+TGG - chr7_1:69341151-69341170 Msa1033930:intron 35.0%
CAAACCATAAAAACGCTTCT+GGG - chr7_1:69341276-69341295 Msa1033930:intron 35.0%
!!! AATTCCCAGAAGCGTTTTTA+TGG + chr7_1:69341283-69341302 None:intergenic 35.0%
AATTTCACTCCTGAAGAAAG+AGG - chr7_1:69341299-69341318 Msa1033930:intron 35.0%
GTGATTATAATGCTTGCTCT+TGG - chr7_1:69341379-69341398 Msa1033930:intron 35.0%
TAAATTGTTGGGTTTACAGG+AGG - chr7_1:69341575-69341594 Msa1033930:intron 35.0%
TTGAGAGATGTGTGACTAAT+GGG - chr7_1:69341670-69341689 Msa1033930:intron 35.0%
!! ACTACTTCTGAAATCCAGTT+TGG - chr7_1:69341827-69341846 Msa1033930:intron 35.0%
GACACACACTCTTCTTAATT+TGG + chr7_1:69341987-69342006 None:intergenic 35.0%
ATCACAAAGACTAGTATCCT+GGG + chr7_1:69342043-69342062 None:intergenic 35.0%
AATCACAAAGACTAGTATCC+TGG + chr7_1:69342044-69342063 None:intergenic 35.0%
CTTAGCCTCTTAGAATGAAA+AGG + chr7_1:69342183-69342202 None:intergenic 35.0%
!!! TCTTTTATTTCTAAGCCGGA+TGG + chr7_1:69342207-69342226 None:intergenic 35.0%
CTGTCAATGCAATCTATCAA+CGG - chr7_1:69342426-69342445 Msa1033930:CDS 35.0%
CAATCTCAGTAAGGTTCTAT+TGG - chr7_1:69342567-69342586 Msa1033930:intron 35.0%
GTATGTAAAAAGACAGCAGA+TGG + chr7_1:69342858-69342877 None:intergenic 35.0%
! ATTACTAGTTGATATCCTGC+AGG - chr7_1:69342939-69342958 Msa1033930:intron 35.0%
! TTACTAGTTGATATCCTGCA+GGG - chr7_1:69342940-69342959 Msa1033930:intron 35.0%
!! AGATATTGTTTCTAGAGCTC+CGG - chr7_1:69342971-69342990 Msa1033930:intron 35.0%
!!! CAACATTTTGAAGTCTCTTC+CGG + chr7_1:69342993-69343012 None:intergenic 35.0%
! CATTCGCTCTATTTTCTGTT+GGG - chr7_1:69343014-69343033 Msa1033930:intron 35.0%
! ATTCGCTCTATTTTCTGTTG+GGG - chr7_1:69343015-69343034 Msa1033930:intron 35.0%
!!! TGAAGGATTTTGGCTTAAAC+AGG - chr7_1:69343050-69343069 Msa1033930:intron 35.0%
! ATTCAAAGAGTGTAGATCTG+AGG - chr7_1:69343146-69343165 Msa1033930:intron 35.0%
GAATAAAAGTTAACTCCCTC+CGG + chr7_1:69343608-69343627 None:intergenic 35.0%
! GATGAAAAACCCTGCATTTT+TGG + chr7_1:69343633-69343652 None:intergenic 35.0%
! TTTTTCATCAATAGCACAGG+TGG - chr7_1:69343644-69343663 Msa1033930:CDS 35.0%
CATGATTCTCCATCTAAAGA+AGG - chr7_1:69343746-69343765 Msa1033930:intron 35.0%
! TTTGATGACAATGCTAACTC+TGG - chr7_1:69343774-69343793 Msa1033930:intron 35.0%
! TTGATGACAATGCTAACTCT+GGG - chr7_1:69343775-69343794 Msa1033930:intron 35.0%
TTCAACAATTGCAGGTGTAA+AGG + chr7_1:69343832-69343851 None:intergenic 35.0%
! TGCTCATTTTCAACAATTGC+AGG + chr7_1:69343840-69343859 None:intergenic 35.0%
!! TTGACTTGTGTCTGTTCTAT+GGG + chr7_1:69343904-69343923 None:intergenic 35.0%
!! TTTGACTTGTGTCTGTTCTA+TGG + chr7_1:69343905-69343924 None:intergenic 35.0%
TCAAAGTAAACCCAATGCTT+TGG - chr7_1:69343920-69343939 Msa1033930:intron 35.0%
!! CCAACTTTTACCAAAGCATT+GGG + chr7_1:69343933-69343952 None:intergenic 35.0%
! TCCAACTTTTACCAAAGCAT+TGG + chr7_1:69343934-69343953 None:intergenic 35.0%
AATGATGACAGACAAGCAAA+TGG - chr7_1:69344200-69344219 Msa1033930:CDS 35.0%
!!! AAAAGTTTTAAAGAGGGCCT+GGG - chr7_1:69344280-69344299 Msa1033930:CDS 35.0%
!! CTAAAGCATTGTTCAGTTGA+TGG + chr7_1:69344518-69344537 None:intergenic 35.0%
TACATTCGAAAGGTAGAGAT+CGG + chr7_1:69344736-69344755 None:intergenic 35.0%
!!! GTAACACTCTTTTTAGGGTT+TGG - chr7_1:69344753-69344772 Msa1033930:CDS 35.0%
! TTTGGTTTACTACAGATGGT+AGG - chr7_1:69344771-69344790 Msa1033930:CDS 35.0%
ATATAGGTGATTGAAGACCT+AGG - chr7_1:69344898-69344917 Msa1033930:CDS 35.0%
TGAAATTAGATCAGCACATC+TGG + chr7_1:69345215-69345234 None:intergenic 35.0%
! ATGACCAGACTGAAATTTTG+AGG + chr7_1:69345362-69345381 None:intergenic 35.0%
TACCATTGAAATGTGCCAAA+AGG - chr7_1:69345436-69345455 Msa1033930:intron 35.0%
! TACCTTTTGGCACATTTCAA+TGG + chr7_1:69345441-69345460 None:intergenic 35.0%
TTGGACATTGGATGAAAACT+GGG - chr7_1:69345647-69345666 Msa1033930:intron 35.0%
CATGCCAATAAGTATGAAGA+TGG - chr7_1:69345802-69345821 Msa1033930:intron 35.0%
AAATGCAAAACAGCATCCTT+TGG - chr7_1:69345967-69345986 Msa1033930:intron 35.0%
GTACATGTAAGAATGTGGTA+GGG + chr7_1:69346087-69346106 None:intergenic 35.0%
TGTACATGTAAGAATGTGGT+AGG + chr7_1:69346088-69346107 None:intergenic 35.0%
ATTGTTAACTACACAGTGCT+TGG - chr7_1:69346144-69346163 Msa1033930:intron 35.0%
TTGTTAACTACACAGTGCTT+GGG - chr7_1:69346145-69346164 Msa1033930:intron 35.0%
ACCTCACATTCTGAATGATA+AGG - chr7_1:69346304-69346323 Msa1033930:intron 35.0%
TCCTTATCATTCAGAATGTG+AGG + chr7_1:69346308-69346327 None:intergenic 35.0%
! TTGTCCCCATTCTTTGTTTA+AGG - chr7_1:69346382-69346401 Msa1033930:intron 35.0%
! TGTCCCCATTCTTTGTTTAA+GGG - chr7_1:69346383-69346402 Msa1033930:intron 35.0%
AAACTCTGTCTGCTATTGTT+AGG - chr7_1:69346447-69346466 Msa1033930:intron 35.0%
AGGTATTCTCCTTTCATCTA+TGG - chr7_1:69346543-69346562 Msa1033930:intron 35.0%
ATAACTGGTGTTCTTCTCAT+AGG + chr7_1:69346703-69346722 None:intergenic 35.0%
TATAGGCTTCATCACACTTT+GGG + chr7_1:69346909-69346928 None:intergenic 35.0%
TTATAGGCTTCATCACACTT+TGG + chr7_1:69346910-69346929 None:intergenic 35.0%
TATTGGAACTAGACTACTAG+AGG - chr7_1:69346945-69346964 Msa1033930:CDS 35.0%
!!! CTGTACTATACCCTTTTTTG+GGG - chr7_1:69347101-69347120 Msa1033930:intron 35.0%
! TTTGGTTCCTCAAAGGAAAA+GGG + chr7_1:69347430-69347449 None:intergenic 35.0%
AGACATTGAAGAAGCAATGA+TGG - chr7_1:69347550-69347569 Msa1033930:intron 35.0%
TGATAAGGACTCTGCAAATT+GGG + chr7_1:69347657-69347676 None:intergenic 35.0%
AGATTCACCGATGAAGATTG+AGG + chr7_1:69340962-69340981 None:intergenic 40.0%
! GGGTGAAATGAAGGGTTTTT+AGG + chr7_1:69340991-69341010 None:intergenic 40.0%
GATTAAGAGTTCGTTGGAAC+TGG + chr7_1:69341119-69341138 None:intergenic 40.0%
TTAATCTCTCTTCCTCGTAG+CGG - chr7_1:69341133-69341152 Msa1033930:intron 40.0%
ACTTTGATATTTCCGCTACG+AGG + chr7_1:69341148-69341167 None:intergenic 40.0%
GCAAACCATAAAAACGCTTC+TGG - chr7_1:69341275-69341294 Msa1033930:intron 40.0%
! AGGGTTTTACCTCTTTCTTC+AGG + chr7_1:69341311-69341330 None:intergenic 40.0%
! CACTACCTGAAGGTATGATT+TGG + chr7_1:69341466-69341485 None:intergenic 40.0%
ATGTATATGACTGAGCTACC+TGG - chr7_1:69341606-69341625 Msa1033930:intron 40.0%
TGTATATGACTGAGCTACCT+GGG - chr7_1:69341607-69341626 Msa1033930:intron 40.0%
TTTGCAGCATAATTCATCCC+AGG + chr7_1:69341627-69341646 None:intergenic 40.0%
CTTGAGAGATGTGTGACTAA+TGG - chr7_1:69341669-69341688 Msa1033930:intron 40.0%
! GACACGGATTATTATCACAC+AGG + chr7_1:69341726-69341745 None:intergenic 40.0%
! TATTGATTGTCTGTTCGTGC+AGG - chr7_1:69341793-69341812 Msa1033930:intron 40.0%
TCACAAAGACTAGTATCCTG+GGG + chr7_1:69342042-69342061 None:intergenic 40.0%
! CTCTCCCTTTTCATTCTAAG+AGG - chr7_1:69342175-69342194 Msa1033930:CDS 40.0%
! GTCTAGCTCAAACTAGATGA+AGG + chr7_1:69342246-69342265 None:intergenic 40.0%
CAATGCAATCTATCAACGGA+AGG - chr7_1:69342430-69342449 Msa1033930:CDS 40.0%
TGCAATGGTCAATCTCAGTA+AGG - chr7_1:69342558-69342577 Msa1033930:intron 40.0%
CGGAAGAGACTTCAAAATGT+TGG - chr7_1:69342991-69343010 Msa1033930:intron 40.0%
! GCATTCGCTCTATTTTCTGT+TGG - chr7_1:69343013-69343032 Msa1033930:intron 40.0%
! TTTGGGAGTTGCAACTTTTC+CGG - chr7_1:69343586-69343605 Msa1033930:intron 40.0%
! GGGTTTTTCATCAATAGCAC+AGG - chr7_1:69343641-69343660 Msa1033930:CDS 40.0%
ATAGCACAGGTGGATACAAA+AGG - chr7_1:69343654-69343673 Msa1033930:CDS 40.0%
! CGTAAAGCATTATGCTTTCC+TGG - chr7_1:69343711-69343730 Msa1033930:intron 40.0%
! AAAGCATTATGCTTTCCTGG+TGG - chr7_1:69343714-69343733 Msa1033930:intron 40.0%
GGTGTAAAGGAATTCTGATG+AGG + chr7_1:69343819-69343838 None:intergenic 40.0%
CCCAATGCTTTGGTAAAAGT+TGG - chr7_1:69343930-69343949 Msa1033930:intron 40.0%
GTAAAAGTTGGATCTTCACG+AGG - chr7_1:69343942-69343961 Msa1033930:intron 40.0%
AGTTGTGATCTCTTGCACAA+TGG - chr7_1:69344114-69344133 Msa1033930:CDS 40.0%
TTGTCTGTCATCATTTGCTC+TGG + chr7_1:69344195-69344214 None:intergenic 40.0%
!!! CAAAAGTTTTAAAGAGGGCC+TGG - chr7_1:69344279-69344298 Msa1033930:CDS 40.0%
GTTGAAGTCAAAGAGAGTGA+GGG - chr7_1:69344319-69344338 Msa1033930:CDS 40.0%
TTGAAGTCAAAGAGAGTGAG+GGG - chr7_1:69344320-69344339 Msa1033930:CDS 40.0%
TCGGAGCTTCTAAATGCATA+TGG + chr7_1:69344481-69344500 None:intergenic 40.0%
!!! GTTCAGTTGATGGCAGTTTT+AGG + chr7_1:69344508-69344527 None:intergenic 40.0%
ACATTCGAAAGGTAGAGATC+GGG + chr7_1:69344735-69344754 None:intergenic 40.0%
! AGGGTTTGGTTTACTACAGA+TGG - chr7_1:69344767-69344786 Msa1033930:CDS 40.0%
!!! TTCGAAGTTTTGAACCTACC+CGG + chr7_1:69345013-69345032 None:intergenic 40.0%
TGAAATGTGCCAAAAGGTAG+TGG - chr7_1:69345442-69345461 Msa1033930:intron 40.0%
! AAGTATGGACCACTACCTTT+TGG + chr7_1:69345454-69345473 None:intergenic 40.0%
!! CTTTAATCTTGTTGGTTCCG+TGG - chr7_1:69345489-69345508 Msa1033930:intron 40.0%
!! GAAATTGGAGTGTTGGACAT+TGG - chr7_1:69345635-69345654 Msa1033930:CDS 40.0%
GTTGGACATTGGATGAAAAC+TGG - chr7_1:69345646-69345665 Msa1033930:intron 40.0%
TTTCGACAAGGCAGATTTGT+TGG - chr7_1:69346197-69346216 Msa1033930:CDS 40.0%
!! AGGCAGATTTGTTGGTAAGA+TGG - chr7_1:69346205-69346224 Msa1033930:CDS 40.0%
GGTGTTCTTCTCATAGGTAA+TGG + chr7_1:69346697-69346716 None:intergenic 40.0%
!! TGCATGGGAAGCATTTAAAG+TGG + chr7_1:69346747-69346766 None:intergenic 40.0%
AGCACACTTAGCATATGCAT+GGG + chr7_1:69346762-69346781 None:intergenic 40.0%
TAGCACACTTAGCATATGCA+TGG + chr7_1:69346763-69346782 None:intergenic 40.0%
GAGTTCACTACCCCAAAAAA+GGG + chr7_1:69347114-69347133 None:intergenic 40.0%
TGAGTTCACTACCCCAAAAA+AGG + chr7_1:69347115-69347134 None:intergenic 40.0%
! CTGTTTTCCCTTTTCCTTTG+AGG - chr7_1:69347420-69347439 Msa1033930:intron 40.0%
! GTTTGGTTCCTCAAAGGAAA+AGG + chr7_1:69347431-69347450 None:intergenic 40.0%
!! ATGAAACTTGTTAACCGGCA+AGG + chr7_1:69347453-69347472 None:intergenic 40.0%
! TGGCTGCAAAGAAAGGTATA+AGG - chr7_1:69347570-69347589 Msa1033930:intron 40.0%
CTGATAAGGACTCTGCAAAT+TGG + chr7_1:69347658-69347677 None:intergenic 40.0%
TTCGTTGGAACTGGAATTGC+AGG + chr7_1:69341110-69341129 None:intergenic 45.0%
!! CTTCTGAAATCCAGTTTGGC+TGG - chr7_1:69341831-69341850 Msa1033930:intron 45.0%
TTTGGCTGGAGATTCAGGAA+AGG - chr7_1:69341845-69341864 Msa1033930:intron 45.0%
ATCCTGGGGCTAAAAAGGTT+AGG + chr7_1:69342028-69342047 None:intergenic 45.0%
CTAGTATCCTGGGGCTAAAA+AGG + chr7_1:69342033-69342052 None:intergenic 45.0%
TCTAAGAGGCTAAGACCATC+CGG - chr7_1:69342189-69342208 Msa1033930:CDS 45.0%
CTGCATATTCTGTGTCTGCA+GGG + chr7_1:69342391-69342410 None:intergenic 45.0%
TCTGCATATTCTGTGTCTGC+AGG + chr7_1:69342392-69342411 None:intergenic 45.0%
! TTGCATTGACAGCTGCAAGT+GGG + chr7_1:69342418-69342437 None:intergenic 45.0%
! ATTGCATTGACAGCTGCAAG+TGG + chr7_1:69342419-69342438 None:intergenic 45.0%
AATGTCGCTAGCACAAACAC+TGG + chr7_1:69342711-69342730 None:intergenic 45.0%
! GTTGATATCCTGCAGGGTTT+TGG - chr7_1:69342946-69342965 Msa1033930:intron 45.0%
ATATCTGACCAAAACCCTGC+AGG + chr7_1:69342957-69342976 None:intergenic 45.0%
TGGGGAGACAAAGAATCTGA+AGG - chr7_1:69343033-69343052 Msa1033930:intron 45.0%
! TCTGTAGTGTTTCTGCAGTG+TGG + chr7_1:69343301-69343320 None:intergenic 45.0%
! AGCTTTTACAGGTAACCTGC+GGG + chr7_1:69343685-69343704 None:intergenic 45.0%
! CAGCTTTTACAGGTAACCTG+CGG + chr7_1:69343686-69343705 None:intergenic 45.0%
AATTCTGATGAGGCTGTGAG+GGG + chr7_1:69343809-69343828 None:intergenic 45.0%
GAATTCTGATGAGGCTGTGA+GGG + chr7_1:69343810-69343829 None:intergenic 45.0%
TGATCTCTTGCACAATGGAC+AGG - chr7_1:69344119-69344138 Msa1033930:CDS 45.0%
! GTGTCATTGCAGCAGTTCTT+AGG + chr7_1:69344161-69344180 None:intergenic 45.0%
AAATGGTGCAGATTGTACCC+AGG - chr7_1:69344217-69344236 Msa1033930:CDS 45.0%
TGACTTCAACGAGGATGAAG+AGG + chr7_1:69344309-69344328 None:intergenic 45.0%
! CACTCTCTTTGACTTCAACG+AGG + chr7_1:69344318-69344337 None:intergenic 45.0%
CGTTGAAGTCAAAGAGAGTG+AGG - chr7_1:69344318-69344337 Msa1033930:CDS 45.0%
CTGATCGACAGTCAACAAAC+TGG + chr7_1:69344349-69344368 None:intergenic 45.0%
ACTGTCGATCAGATTCTAGC+TGG - chr7_1:69344357-69344376 Msa1033930:CDS 45.0%
! CTGTCGATCAGATTCTAGCT+GGG - chr7_1:69344358-69344377 Msa1033930:CDS 45.0%
! TGTCGATCAGATTCTAGCTG+GGG - chr7_1:69344359-69344378 Msa1033930:CDS 45.0%
!!! GATGGCAGTTTTAGGCTGAT+CGG + chr7_1:69344500-69344519 None:intergenic 45.0%
TAGGTGATTGAAGACCTAGG+TGG - chr7_1:69344901-69344920 Msa1033930:CDS 45.0%
TCAACCACACATGTTGTCAC+AGG - chr7_1:69344946-69344965 Msa1033930:CDS 45.0%
TTGTCCTGTGACAACATGTG+TGG + chr7_1:69344953-69344972 None:intergenic 45.0%
TTCTGTACTGCTCTCTGTTC+CGG - chr7_1:69344991-69345010 Msa1033930:intron 45.0%
CATCCACTAATCACGTTCCA+CGG + chr7_1:69345509-69345528 None:intergenic 45.0%
TGCATGCAGGTGTTAACAGA+TGG - chr7_1:69345721-69345740 Msa1033930:intron 45.0%
!! GCATTTTACCAAGTTGGGCA+TGG + chr7_1:69345953-69345972 None:intergenic 45.0%
TTAACTACACAGTGCTTGGG+TGG - chr7_1:69346148-69346167 Msa1033930:intron 45.0%
TCTGCTATTGTTAGGTCTGC+TGG - chr7_1:69346455-69346474 Msa1033930:intron 45.0%
! TGCACCTTGGATGCATTTTC+TGG - chr7_1:69347320-69347339 Msa1033930:CDS 45.0%
CACTCCAGAAAATGCATCCA+AGG + chr7_1:69347327-69347346 None:intergenic 45.0%
TTTGAGGAACCAAACCTTGC+CGG - chr7_1:69347436-69347455 Msa1033930:intron 45.0%
! ACTTGTTAACCGGCAAGGTT+TGG + chr7_1:69347448-69347467 None:intergenic 45.0%
GCAATGATGGCTGCAAAGAA+AGG - chr7_1:69347563-69347582 Msa1033930:intron 45.0%
TAAGGACTTTCGACAGTGAG+TGG - chr7_1:69347588-69347607 Msa1033930:intron 45.0%
TAAGGACTCTGCAAATTGGG+AGG + chr7_1:69347654-69347673 None:intergenic 45.0%
!! TATATTAATTAAAAAAAGAA+TGG - chr7_1:69346572-69346591 Msa1033930:intron 5.0%
!! TATAAAAATAAATAAATAAC+TGG + chr7_1:69346718-69346737 None:intergenic 5.0%
! GGAATTGCAGGTGAAAGTGC+TGG + chr7_1:69341098-69341117 None:intergenic 50.0%
CGTAGAACACGAGTTCATGC+TGG - chr7_1:69341413-69341432 Msa1033930:intron 50.0%
ACCTTCAGGTAGTGCAACAC+TGG - chr7_1:69341472-69341491 Msa1033930:intron 50.0%
ACCAGTGTTGCACTACCTGA+AGG + chr7_1:69341476-69341495 None:intergenic 50.0%
TCCAGTTTGGCTGGAGATTC+AGG - chr7_1:69341840-69341859 Msa1033930:intron 50.0%
TCCTGAATCTCCAGCCAAAC+TGG + chr7_1:69341844-69341863 None:intergenic 50.0%
!! AGCCTAACCTTTTTAGCCCC+AGG - chr7_1:69342023-69342042 Msa1033930:intron 50.0%
ACCAACACTGCATGCAACGA+TGG + chr7_1:69342100-69342119 None:intergenic 50.0%
AGACAGCAGATGGCATGAGT+AGG + chr7_1:69342848-69342867 None:intergenic 50.0%
! GTGTTTCTGCAGTGTGGTGT+TGG + chr7_1:69343295-69343314 None:intergenic 50.0%
! GGAGTTGCAACTTTTCCGGA+GGG - chr7_1:69343590-69343609 Msa1033930:intron 50.0%
ATACAAAAGGTAGAGCCCGC+AGG - chr7_1:69343667-69343686 Msa1033930:CDS 50.0%
ATCATGAGAGTCGAACCACC+AGG + chr7_1:69343732-69343751 None:intergenic 50.0%
GGAATTCTGATGAGGCTGTG+AGG + chr7_1:69343811-69343830 None:intergenic 50.0%
CGAGGACGTGGAAAACTCAA+TGG - chr7_1:69343960-69343979 Msa1033930:intron 50.0%
! TTTTGTCTCCGAGGCTGGTA+GGG - chr7_1:69344382-69344401 Msa1033930:CDS 50.0%
TAGGGCCAATCCTTGTTCTG+CGG - chr7_1:69344400-69344419 Msa1033930:CDS 50.0%
GGATTCCGCAGAACAAGGAT+TGG + chr7_1:69344408-69344427 None:intergenic 50.0%
TGTGGTTGAGCTTCCATCAG+AGG + chr7_1:69344935-69344954 None:intergenic 50.0%
TCTGTACTGCTCTCTGTTCC+GGG - chr7_1:69344992-69345011 Msa1033930:intron 50.0%
GTTCCGTGGAACGTGATTAG+TGG - chr7_1:69345503-69345522 Msa1033930:intron 50.0%
TGAAGTGTGTCCAGCTATCG+AGG - chr7_1:69345684-69345703 Msa1033930:intron 50.0%
GAAGTGTGTCCAGCTATCGA+GGG - chr7_1:69345685-69345704 Msa1033930:intron 50.0%
ATTCAACGCCATGCCCAACT+TGG - chr7_1:69345942-69345961 Msa1033930:intron 50.0%
GCTATTGTTAGGTCTGCTGG+TGG - chr7_1:69346458-69346477 Msa1033930:intron 50.0%
! GGCAAGGTTTGGTTCCTCAA+AGG + chr7_1:69347437-69347456 None:intergenic 50.0%
CATGAGACAAGAGCTCGACA+TGG - chr7_1:69347625-69347644 Msa1033930:intron 50.0%
!! GGTGAAAGTGCTGGCTTCGA+CGG + chr7_1:69341089-69341108 None:intergenic 55.0%
GCCATCGTTGCATGCAGTGT+TGG - chr7_1:69342096-69342115 Msa1033930:intron 55.0%
! GGGAGTTGCAACTTTTCCGG+AGG - chr7_1:69343589-69343608 Msa1033930:intron 55.0%
GTTGGATCTTCACGAGGACG+TGG - chr7_1:69343948-69343967 Msa1033930:intron 55.0%
!! TAGCTGGGGTTTTGTCTCCG+AGG - chr7_1:69344373-69344392 Msa1033930:CDS 55.0%
! GTTTTGTCTCCGAGGCTGGT+AGG - chr7_1:69344381-69344400 Msa1033930:CDS 55.0%
TGAGGGGATTCCGCAGAACA+AGG + chr7_1:69344413-69344432 None:intergenic 55.0%
TACTGCTCTCTGTTCCGGGT+AGG - chr7_1:69344996-69345015 Msa1033930:intron 55.0%
! CTTGGGTGGTCTCATCGACT+TGG - chr7_1:69346162-69346181 Msa1033930:intron 55.0%
CGAGGATGAAGAGGCTTCCC+AGG + chr7_1:69344300-69344319 None:intergenic 60.0%
!! TGGGGTTTTGTCTCCGAGGC+TGG - chr7_1:69344377-69344396 Msa1033930:CDS 60.0%
!! AGGATTGGCCCTACCAGCCT+CGG + chr7_1:69344393-69344412 None:intergenic 60.0%
TGTCCAGCTATCGAGGGACG+TGG - chr7_1:69345691-69345710 Msa1033930:intron 60.0%
GTCCAGCTATCGAGGGACGT+GGG - chr7_1:69345692-69345711 Msa1033930:intron 60.0%
CTATCGAGGGACGTGGGTGA+TGG - chr7_1:69345698-69345717 Msa1033930:intron 60.0%
! ACGTGGGTGATGGTGCATGC+AGG - chr7_1:69345708-69345727 Msa1033930:intron 60.0%
CACCCACGTCCCTCGATAGC+TGG + chr7_1:69345697-69345716 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 69340930 69347685 69340930 ID=Msa1033930;Name=Msa1033930
chr7_1 mRNA 69340930 69347685 69340930 ID=Msa1033930-mRNA-1;Parent=Msa1033930;Name=Msa1033930-mRNA-1;_AED=0.12;_eAED=0.12;_QI=7|0.84|0.57|1|1|1|14|0|650
chr7_1 exon 69340930 69341127 69340930 ID=Msa1033930-mRNA-1:exon:16306;Parent=Msa1033930-mRNA-1
chr7_1 exon 69342131 69342318 69342131 ID=Msa1033930-mRNA-1:exon:16305;Parent=Msa1033930-mRNA-1
chr7_1 exon 69342397 69342455 69342397 ID=Msa1033930-mRNA-1:exon:16304;Parent=Msa1033930-mRNA-1
chr7_1 exon 69343602 69343711 69343602 ID=Msa1033930-mRNA-1:exon:16303;Parent=Msa1033930-mRNA-1
chr7_1 exon 69344026 69344474 69344026 ID=Msa1033930-mRNA-1:exon:16302;Parent=Msa1033930-mRNA-1
chr7_1 exon 69344634 69344973 69344634 ID=Msa1033930-mRNA-1:exon:16301;Parent=Msa1033930-mRNA-1
chr7_1 exon 69345544 69345654 69345544 ID=Msa1033930-mRNA-1:exon:16300;Parent=Msa1033930-mRNA-1
chr7_1 exon 69346164 69346256 69346164 ID=Msa1033930-mRNA-1:exon:16299;Parent=Msa1033930-mRNA-1
chr7_1 exon 69346749 69346800 69346749 ID=Msa1033930-mRNA-1:exon:16298;Parent=Msa1033930-mRNA-1
chr7_1 exon 69346924 69347021 69346924 ID=Msa1033930-mRNA-1:exon:16297;Parent=Msa1033930-mRNA-1
chr7_1 exon 69347136 69347197 69347136 ID=Msa1033930-mRNA-1:exon:16296;Parent=Msa1033930-mRNA-1
chr7_1 exon 69347295 69347348 69347295 ID=Msa1033930-mRNA-1:exon:16295;Parent=Msa1033930-mRNA-1
chr7_1 exon 69347443 69347544 69347443 ID=Msa1033930-mRNA-1:exon:16294;Parent=Msa1033930-mRNA-1
chr7_1 exon 69347642 69347685 69347642 ID=Msa1033930-mRNA-1:exon:16293;Parent=Msa1033930-mRNA-1
chr7_1 five_prime_UTR 69347679 69347685 69347679 ID=Msa1033930-mRNA-1:five_prime_utr;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69347642 69347678 69347642 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69347443 69347544 69347443 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69347295 69347348 69347295 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69347136 69347197 69347136 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69346924 69347021 69346924 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69346749 69346800 69346749 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69346164 69346256 69346164 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69345544 69345654 69345544 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69344634 69344973 69344634 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69344026 69344474 69344026 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69343602 69343711 69343602 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69342397 69342455 69342397 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69342131 69342318 69342131 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
chr7_1 CDS 69340930 69341127 69340930 ID=Msa1033930-mRNA-1:cds;Parent=Msa1033930-mRNA-1
Gene Sequence

>Msa1033930

ATGGCGCCAAAAAGAAAACATTCCTCAATCTTCATCGGTAACTGCGAAATTACCGTCGAAGCCAGCACTTTCACCTGCAATTCCAGTTCCAACGAACTCTTAATCTCTCTTCCTCGTAGCGGAAATATCAAAGTATCTGATGTTTCTGCAAACCATAAAAACGCTTCTGGGAATTTCACTCCTGAAGAAAGAGAACACGAGTTCATGCTGGTTAATCCTAAAGATGATGATGATATTACCAAATCATACCTTCAGGAGGTATTACAGATGTATATGACTGAGCTACCTGGGATGAATTATGCTGCAAATACCGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACACTACTTCTGAAATCCAGTTTGGCTGGAGATTCAGGAAAGGTTATAGCTGCAATTACTTATCAAATCGTCCCTGCAGACACAGAATATGCAGAGATCCCACTTGCAGCTGTCAATGCAATCTATCAACGGAAGGGTTTTGGTCAGATATTGTTTCTAGAGCTCCGGAAGAGACTTCAAAATGTTGGCATTCGCTCTATTTTCTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTCATCAATAGCACAGGTGGATACAAAAGGTAGAGCCCGCAGGTTACCTGTAAAAGCTGATATTCGTAAAGCATTATGCTTTCCTGGTGGTTCGACTCTCATGATTCTCCATCTAAAGAAGGAATTGTTTGATGACAATGCTAACTCTGGGAAGTGTCTCCCCTCACAGCCTCATCAGAATTCCTTTACACCTGCAATTGTTGAAAATGAGCAGCTTGAATTCTCAGATGAACTACTCATTAACTTGAAATCTTCCCATAGAACAGACACAAGTCAAAGTAAACCCAATGCTTTGGTAAAAGTTGGATCTTCACGAGGACGTGGAAAACTCAATGGATTTGACAGTCAGAATCCTAAGAACTGCTGCAATGACACTGTTGATTTTGCCAGAGCAAATGATGACAGACAAGCAAATGGTGCAGATTGTACCCAGGATGAAAATTATGCTAATATAGCGCATTGTTCTCAATCTACAAAAGTTTTAAAGAGGGCCTGGGAAGCCTCTTCATCCTCGTTGAAGTCAAAGAGAGTGAGGGGAAGCCAGTTTGTTGACTGTCGATCAGATTCTAGCTGGGGTTTTGTCTCCGAGGCTGGTAGGGCCAATCCTTGTTCTGCGGAATCCCCTCATTGTGATACTTCAATTACAAAGAACTCTGAAAAATGTATTGGAGACCATATGCATTTAGAAGCTCCGATCAGCCTAAAACTGCCATCAACTGAACAATGCTTTAGAATCATGTTGATGAACATCACTGATGACGCTAAGAAAACACAGCTTACAAAGGTGATTGAAGACCTAGGTGGAACTATTGCCTCTGATGGAAGCTCAACCACACATGTTGTCACAGGACAAGTGAGAAAAACTCTGAATTTCTGTACTGCTCTCTGTTCCGGTGCTTGGGTGGTCTCATCGACTTGGTTAAAAGAAAGTTTTCGACAAGGCAGATTTGTTGATGAATTACCTCACATTCTGAATGATAAGGATTATTTGTTGAAGTATAAATCGGATTTAAGAAGTGCAGTTTTACGAGCAAAAGCTTGTCCCCATTCTTTGTTTAAGGGTTATAATATATGTATTGCAGCTAATGTTCAAACTTCTGCAAAAACTCTGTCTGCTATTGTTAGGTCTGCTGGTGGTAATGTTATTAGTGGACTAAGAAAAGTAAATGAAGCATCAACAACAATCTTTGTGACTTGCGAAGAAGACATTGAAGAAGCAATGATGGCTGCAAAGAAAGGTATAAGGACTTTCGACAGTGAGTGGTTTATGAACTGTGTCATGAGACAAGAGCTCGACATGGAAGCCTCCCAATTTGCAGAGTCCTTATCAGATTGTTAA

Protein sequence

>Msa1033930

MAPKRKHSSIFIGNCEITVEASTFTCNSSSNELLISLPRSGNIKVSDVSANHKNASGNFTPEEREHEFMLVNPKDDDDITKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSSLAGDSGKVIAAITYQIVPADTEYAEIPLAAVNAIYQRKGFGQILFLELRKRLQNVGIRSIFCWGDKESEGFWLKQGFSSIAQVDTKGRARRLPVKADIRKALCFPGGSTLMILHLKKELFDDNANSGKCLPSQPHQNSFTPAIVENEQLEFSDELLINLKSSHRTDTSQSKPNALVKVGSSRGRGKLNGFDSQNPKNCCNDTVDFARANDDRQANGADCTQDENYANIAHCSQSTKVLKRAWEASSSSLKSKRVRGSQFVDCRSDSSWGFVSEAGRANPCSAESPHCDTSITKNSEKCIGDHMHLEAPISLKLPSTEQCFRIMLMNITDDAKKTQLTKVIEDLGGTIASDGSSTTHVVTGQVRKTLNFCTALCSGAWVVSSTWLKESFRQGRFVDELPHILNDKDYLLKYKSDLRSAVLRAKACPHSLFKGYNICIAANVQTSAKTLSAIVRSAGGNVISGLRKVNEASTTIFVTCEEDIEEAMMAAKKGIRTFDSEWFMNCVMRQELDMEASQFAESLSDC*