AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036000 MtrunA17_Chr7g0260121 74.662 517 58 7 50 526 1 484 0.0 738
Msa1036000 MtrunA17_Chr7g0260121 56.434 645 182 14 508 1148 1 550 0.0 644
Msa1036000 MtrunA17_Chr6g0453821 58.658 641 199 9 510 1148 2 578 0.0 696
Msa1036000 MtrunA17_Chr6g0453821 58.436 486 157 7 50 497 1 479 1.81e-178 536
Msa1036000 MtrunA17_Chr3g0079861 54.834 662 216 9 510 1149 4 604 0.0 672
Msa1036000 MtrunA17_Chr3g0079861 51.756 541 192 10 50 526 3 538 9.32e-165 501
Msa1036000 MtrunA17_Chr7g0260261 52.115 662 233 8 510 1149 4 603 0.0 636
Msa1036000 MtrunA17_Chr7g0260261 52.871 505 181 7 50 502 3 502 1.09e-157 483
Msa1036000 MtrunA17_Chr7g0256081 52.219 676 224 11 506 1149 22 630 0.0 620
Msa1036000 MtrunA17_Chr7g0256081 52.574 544 203 10 48 544 35 570 5.67e-160 489
Msa1036000 MtrunA17_Chr7g0254771 54.317 637 224 9 518 1149 10 584 0.0 607
Msa1036000 MtrunA17_Chr7g0254771 54.262 481 188 5 50 500 1 479 5.51e-152 467
Msa1036000 MtrunA17_Chr7g0254851 52.886 641 232 9 518 1149 10 589 0.0 575
Msa1036000 MtrunA17_Chr7g0254851 50.556 540 220 9 50 544 1 538 1.16e-148 458
Msa1036000 MtrunA17_Chr6g0453901 56.122 490 155 7 510 997 2 433 3.22e-164 495
Msa1036000 MtrunA17_Chr6g0453901 57.306 438 142 7 50 449 1 431 8.21e-154 468
Msa1036000 MtrunA17_Chr7g0258241 55.455 440 133 6 563 1000 1 379 1.38e-140 429
Msa1036000 MtrunA17_Chr7g0258241 57.743 381 129 5 104 454 1 379 1.05e-128 398
Msa1036000 MtrunA17_Chr7g0254311 53.704 432 164 7 50 447 1 430 3.58e-128 399
Msa1036000 MtrunA17_Chr7g0254311 49.896 483 175 8 518 994 10 431 2.57e-123 386
Msa1036000 MtrunA17_Chr7g0260111 85.321 218 24 2 508 717 1 218 2.60e-116 363
Msa1036000 MtrunA17_Chr7g0260111 56.667 180 44 5 51 198 3 180 1.22e-49 179
Msa1036000 MtrunA17_Chr7g0266931 53.763 372 102 7 507 868 26 337 6.98e-108 341
Msa1036000 MtrunA17_Chr7g0266931 56.688 314 99 4 47 323 24 337 1.44e-99 319
Msa1036000 MtrunA17_Chr7g0267251 60.490 286 104 2 831 1115 1 278 2.95e-106 335
Msa1036000 MtrunA17_Chr7g0267251 63.033 211 76 2 294 502 1 211 7.45e-80 263
Msa1036000 MtrunA17_Chr7g0266941 59.041 271 92 4 896 1148 2 271 1.45e-97 311
Msa1036000 MtrunA17_Chr7g0266941 47.087 206 97 4 351 544 2 207 7.41e-48 172
Msa1036000 MtrunA17_Chr2g0293781 45.195 385 117 9 106 455 4 329 4.21e-84 276
Msa1036000 MtrunA17_Chr2g0293781 58.706 201 72 4 802 1001 139 329 1.48e-61 213
Msa1036000 MtrunA17_Chr2g0293781 49.259 270 111 10 568 815 5 270 1.78e-56 199
Msa1036000 MtrunA17_Chr2g0312391 53.304 227 91 3 516 733 16 236 3.16e-63 218
Msa1036000 MtrunA17_Chr2g0312391 42.807 285 119 4 57 300 16 297 1.20e-55 196
Msa1036000 MtrunA17_Chr6g0478831 62.791 172 58 3 518 687 10 177 3.77e-59 201
Msa1036000 MtrunA17_Chr6g0478831 50.581 172 57 2 50 193 1 172 4.12e-42 152
Msa1036000 MtrunA17_Chr7g0256071 57.391 115 37 1 1046 1148 1 115 4.69e-36 132
Msa1036000 MtrunA17_Chr7g0271091 73.563 87 18 2 518 604 10 91 8.73e-34 125
Msa1036000 MtrunA17_Chr7g0271091 61.290 93 31 1 50 142 1 88 1.42e-30 116
Msa1036000 MtrunA17_Chr6g0478971 60.606 99 36 1 1053 1148 1 99 2.93e-32 121
Msa1036000 MtrunA17_Chr7g0258231 61.458 96 36 1 1053 1148 1 95 5.36e-31 117
Msa1036000 MtrunA17_Chr2g0312381 43.353 173 91 3 946 1117 2 168 1.37e-30 120
Msa1036000 MtrunA17_Chr2g0312381 43.564 101 56 1 400 500 2 101 2.84e-15 75.9
Msa1036000 MtrunA17_Chr7g0274761 35.498 231 131 5 518 730 7 237 2.52e-26 109
Msa1036000 MtrunA17_Chr7g0274761 32.018 228 107 6 58 237 6 233 5.18e-19 88.2
Msa1036000 MtrunA17_Chr7g0273381 34.978 223 126 5 518 725 7 225 1.88e-24 108
Msa1036000 MtrunA17_Chr7g0273381 28.428 299 152 10 58 304 6 294 1.93e-17 87.0
Msa1036000 MtrunA17_Chr7g0273381 26.032 315 193 13 844 1140 171 463 3.05e-12 70.5
Msa1036000 MtrunA17_Chr7g0275031 29.537 281 170 7 518 775 7 282 9.51e-23 103
Msa1036000 MtrunA17_Chr7g0275031 28.428 299 170 12 856 1129 187 466 4.21e-17 85.9
Msa1036000 MtrunA17_Chr7g0275031 27.152 302 156 11 58 300 6 302 1.28e-15 81.3
Msa1036000 MtrunA17_Chr7g0267241 60.274 73 23 2 558 630 15 81 3.33e-21 89.0
Msa1036000 MtrunA17_Chr7g0256111 56.667 60 14 1 1102 1149 1 60 1.06e-15 72.4
Msa1036000 MtrunA17_Chr5g0442431 33.566 143 84 4 591 726 6 144 1.90e-12 66.6
Msa1036000 MtrunA17_Chr0c03g0490011 28.500 200 110 8 56 235 9 195 5.19e-12 69.3
Msa1036000 MtrunA17_Chr1g0154461 28.571 210 119 5 58 248 31 228 2.43e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036000 AT3G26922.1 30.952 210 108 7 518 722 18 195 2.60e-11 66.6
Msa1036000 AT3G26922.2 30.952 210 108 7 518 722 18 195 2.60e-11 66.6
Msa1036000 AT1G13570.2 27.572 243 143 8 50 274 1 228 7.31e-11 65.1
Msa1036000 AT1G61330.1 30.189 212 113 9 518 727 18 196 9.57e-11 65.9

Find 176 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAACTGTGGGATTCAAAT+TGG 0.178034 7_1:+72124843 Msa1036000:CDS
GTTAACTGCGGGGTTGAAAT+TGG 0.183172 7_1:+72118896 Msa1036000:CDS
AAAACTTACATCTGAATAAT+TGG 0.191119 7_1:-72118044 None:intergenic
ATCATAATCTCGACTACTTT+TGG 0.207236 7_1:+72119648 Msa1036000:CDS
TTGAAACCAGATAAATTTAT+AGG 0.212278 7_1:-72118713 None:intergenic
CATTTAACTCCATTTGTTAT+AGG 0.231918 7_1:+72119728 Msa1036000:CDS
ATCTTAATAAAGACTACTTT+TGG 0.243294 7_1:+72126157 Msa1036000:CDS
AGCGAAGCTCAAACATGTTT+TGG 0.251710 7_1:-72124155 None:intergenic
AAAGTTAAGTTTGAAGGATT+TGG 0.256483 7_1:+72118266 Msa1036000:CDS
GGCCAAGTTTATAAGGCTTT+TGG 0.262417 7_1:+72125017 Msa1036000:CDS
CTTGTAGACTTCACCCTTGA+TGG 0.263552 7_1:+72124762 Msa1036000:CDS
TATCATCCAACAATTCTTAA+AGG 0.267997 7_1:-72119179 None:intergenic
AATTGAACTCACAATCATTA+AGG 0.276353 7_1:-72118829 None:intergenic
CAATAGAAGTTCAATACTTT+TGG 0.279741 7_1:-72124373 None:intergenic
CGAAGGTGGCCAAGTTTATA+AGG 0.282650 7_1:+72125010 Msa1036000:CDS
AGTTAGCTACTCATCTATTA+AGG 0.293747 7_1:+72126807 Msa1036000:CDS
AAAGTTAGGTTTGAAGGATT+TGG 0.295847 7_1:+72124062 Msa1036000:CDS
CATGAATTGATCCAATCTTT+TGG 0.303146 7_1:-72124241 None:intergenic
TATGATCCGACAGTTCTTAA+AGG 0.309723 7_1:-72125153 None:intergenic
ATAGCACCTATAAATTTATC+TGG 0.311525 7_1:+72118707 Msa1036000:CDS
ATCTGAATTTGCCAAAAGAT+TGG 0.317357 7_1:+72124230 Msa1036000:CDS
ATGATGGCATGTCTCCTTAT+AGG 0.324330 7_1:+72119260 Msa1036000:CDS
CACACATGAGTGGATTTAAT+AGG 0.326687 7_1:+72126699 Msa1036000:CDS
TGTAAAGCAGGATTTGCTTC+AGG 0.326741 7_1:+72118769 Msa1036000:CDS
AATTGAACTTGCAATCATAA+AGG 0.332753 7_1:-72124635 None:intergenic
GTGAAGCAAGATATGCTTCA+TGG 0.342823 7_1:+72124717 Msa1036000:CDS
GGCTTCACGAATGGAGATTA+AGG 0.347239 7_1:+72124112 Msa1036000:CDS
TTAACTGCGGGGTTGAAATT+GGG 0.351841 7_1:+72118897 Msa1036000:CDS
CTCTCATCCTTTGAATATAG+TGG 0.356872 7_1:+72119304 Msa1036000:CDS
TTAACTGTGGGATTCAAATT+GGG 0.357331 7_1:+72124844 Msa1036000:CDS
CCATTTGCCATTCATCCATA+TGG 0.361871 7_1:+72119403 Msa1036000:CDS
ACAATCAGGCAACTCAATCT+TGG 0.363317 7_1:-72124019 None:intergenic
TCAATGTTCATTCTGTGTAT+TGG 0.366352 7_1:-72124936 None:intergenic
ATTTCAAAATCTCAGACAAT+TGG 0.369850 7_1:+72126110 Msa1036000:CDS
TGGCTCCCTTAGCGATTCCT+TGG 0.372534 7_1:-72124353 None:intergenic
GACAAGATATATCTTTGTTA+TGG 0.382020 7_1:+72125307 Msa1036000:CDS
ATATGTTGTGATCTTGCAAT+TGG 0.406501 7_1:-72125395 None:intergenic
GATCTATATTCATCACCTAA+TGG 0.410609 7_1:-72124309 None:intergenic
TGGACTCCATGAATGTATTT+CGG 0.410803 7_1:+72119105 Msa1036000:CDS
AAAAGCCTTCCACTCCTTCA+AGG 0.411207 7_1:+72124201 Msa1036000:CDS
GCAATTGGACCAAAGGGAAA+TGG 0.412473 7_1:-72125380 None:intergenic
TTACATCTGAATAATTGGTT+TGG 0.415762 7_1:-72118039 None:intergenic
GCATCAATAGACATCCTATA+AGG 0.425432 7_1:-72119274 None:intergenic
TCTGAATAATTGGTTTGGTT+TGG 0.427249 7_1:-72118034 None:intergenic
ATTGAACTTGCAATCATAAA+GGG 0.427289 7_1:-72124634 None:intergenic
CCATTCATGAAGCCATCGTT+TGG 0.427804 7_1:-72118307 None:intergenic
GGCTCCCTTAGCGATTCCTT+GGG 0.432860 7_1:-72124352 None:intergenic
AGCTGAATTAAAGAAGATCT+TGG 0.437072 7_1:+72126083 Msa1036000:CDS
AGAGAAATTAGCAGAGGTAT+TGG 0.441283 7_1:+72119574 Msa1036000:CDS
ATTGAACTCACAATCATTAA+GGG 0.446724 7_1:-72118828 None:intergenic
AAATTTAGAGCTATTTATTG+AGG 0.448634 7_1:+72119616 Msa1036000:CDS
AATGAACAACCTATAACAAA+TGG 0.453446 7_1:-72119737 None:intergenic
ATCGGAATTCGTCACAAGAA+TGG 0.456875 7_1:+72118434 Msa1036000:CDS
CTCTCATCCTTTGAATATAG+TGG 0.457170 7_1:+72125278 Msa1036000:CDS
ACAACAACCATCTGAGTCAT+TGG 0.457473 7_1:-72126900 None:intergenic
GAATAATTGGTTTGGTTTGG+TGG 0.457665 7_1:-72118031 None:intergenic
ATCCAAAAGCCTTATAAACT+TGG 0.460321 7_1:-72125019 None:intergenic
ATTCAGATTGAAACCCTTGA+AGG 0.460693 7_1:-72124215 None:intergenic
ACGTCACCTTTAAGAATTGT+TGG 0.460869 7_1:+72119173 Msa1036000:CDS
TGTTGTCCGAAATACATTCA+TGG 0.461388 7_1:-72119111 None:intergenic
CCAAACGATGGCTTCATGAA+TGG 0.461815 7_1:+72118307 Msa1036000:CDS
TAAAGGTAACGTTCTCAAGT+TGG 0.464438 7_1:-72125136 None:intergenic
GTAAAGCAGGATTTGCTTCA+GGG 0.464723 7_1:+72118770 Msa1036000:CDS
ATTTAAACATTGTTAACTGC+GGG 0.464814 7_1:+72118885 Msa1036000:CDS
CAATCAGGCAACTCAATCTT+GGG 0.467878 7_1:-72124018 None:intergenic
TATGGCCCCAAGTTTATTGA+AGG 0.474254 7_1:+72125325 Msa1036000:CDS
TCTACCTCTGTAGCTAAACT+TGG 0.474315 7_1:-72119023 None:intergenic
ATATAAAGTAAGCTTCCATA+TGG 0.474931 7_1:-72119418 None:intergenic
GATGGTTGTTGTTGGTTTGA+AGG 0.478345 7_1:+72126911 Msa1036000:CDS
GTGACGACGATTATGTTTGA+TGG 0.480760 7_1:+72125059 Msa1036000:CDS
TATTACAGTCAAACATGTTA+CGG 0.483395 7_1:-72118359 None:intergenic
ATCCTTTGAATATAGTGGTC+AGG 0.483396 7_1:+72125283 Msa1036000:CDS
TCTCGTGACAAATTCTATAC+AGG 0.489778 7_1:+72126863 Msa1036000:CDS
AGAAGTCCATAGGTGCTACT+AGG 0.490073 7_1:-72124509 None:intergenic
ACTACCTCTGTAGCTAAACT+TGG 0.490385 7_1:-72124973 None:intergenic
ATGCTCAAATGACGTAGCTT+CGG 0.491534 7_1:-72119223 None:intergenic
ATATTCGATATAACACAATC+TGG 0.493160 7_1:-72118237 None:intergenic
GCATCTTGTTGTTGTAAAGC+AGG 0.493856 7_1:+72118757 Msa1036000:CDS
GGCAAATGGAGTTTCTTCTC+TGG 0.494873 7_1:-72119389 None:intergenic
GTAGCACCTATGGACTTCTC+TGG 0.495732 7_1:+72124513 Msa1036000:CDS
AGTCTAAAGACAAATTTGTA+TGG 0.496604 7_1:-72118632 None:intergenic
CACCTAATGGAAAATTTACT+CGG 0.497338 7_1:-72124296 None:intergenic
AGAGTCATGGAAAATTTGTA+TGG 0.498068 7_1:-72124438 None:intergenic
TAAGCTTCCATATGGATGAA+TGG 0.498427 7_1:-72119410 None:intergenic
ATGGTTGTTGTTGGTTTGAA+GGG 0.499256 7_1:+72126912 Msa1036000:CDS
AATTTAGAGCTATTTATTGA+GGG 0.499343 7_1:+72119617 Msa1036000:CDS
CCATATGGATGAATGGCAAA+TGG 0.500728 7_1:-72119403 None:intergenic
AAAGCTGAATAACAACAGAT+TGG 0.501184 7_1:-72125097 None:intergenic
AGTCAATTCATTTCTACAAG+TGG 0.505344 7_1:+72127038 Msa1036000:three_prime_UTR
TAACTGCGGGGTTGAAATTG+GGG 0.506509 7_1:+72118898 Msa1036000:CDS
TTCTGAATGTCTCCAACTTG+AGG 0.511702 7_1:+72119150 Msa1036000:CDS
ATAATCGATAAAATACAATC+AGG 0.514529 7_1:-72124033 None:intergenic
TATGATTATGAGCACTTCAC+AGG 0.515051 7_1:+72119453 Msa1036000:CDS
GTCATATGAAACAAACGATA+GGG 0.515237 7_1:+72124395 Msa1036000:CDS
GTGCTGCCTAGTAGCACCTA+TGG 0.515710 7_1:+72124503 Msa1036000:CDS
GACAAATTCTATACAGGTGA+TGG 0.516045 7_1:+72126869 Msa1036000:CDS
ACAATTGAAAGAGTATTCAA+TGG 0.517553 7_1:-72124907 None:intergenic
CCATTCGTGAAGCCACCGCT+TGG 0.518737 7_1:-72124103 None:intergenic
ATAATTGATTGTGGCTATGA+TGG 0.523820 7_1:+72119244 Msa1036000:CDS
TTATGCTGTGAGGATGTTCA+TGG 0.526795 7_1:-72125238 None:intergenic
GATGAATATAGATCGGTCAT+TGG 0.530899 7_1:+72124318 Msa1036000:CDS
ATGACTCAGATGGTTGTTGT+TGG 0.532129 7_1:+72126903 Msa1036000:CDS
AGTTGAACATTGTTAACTGT+GGG 0.532213 7_1:+72124832 Msa1036000:CDS
CATTTGAGCATAATTGATTG+TGG 0.533127 7_1:+72119235 Msa1036000:CDS
AAAGCCTTCCACTCCTTCAA+GGG 0.534990 7_1:+72124202 Msa1036000:CDS
GTGAAGCAGGATATGCTTCA+TGG 0.537099 7_1:+72124576 Msa1036000:CDS
TCTATACAGGTGATGGTGGA+TGG 0.537992 7_1:+72126876 Msa1036000:CDS
TTGTAAGTTCAACTCTGACT+TGG 0.539140 7_1:+72124785 Msa1036000:CDS
TAAAGGTGACGTCCTCAAGT+TGG 0.541407 7_1:-72119162 None:intergenic
ATTGGTAGATTGATTTCCCA+AGG 0.543308 7_1:+72124336 Msa1036000:CDS
TAATGCTCCAAGGTTATCAA+AGG 0.545010 7_1:+72119348 Msa1036000:CDS
TCAATTGAATATTCTTGCAA+TGG 0.545122 7_1:+72118959 Msa1036000:CDS
TAACTGTGGGATTCAAATTG+GGG 0.546856 7_1:+72124845 Msa1036000:CDS
TGTTCATTGAGTGTACTTCA+CGG 0.547219 7_1:-72118982 None:intergenic
TGATCTTGCAATTGGACCAA+AGG 0.548527 7_1:-72125387 None:intergenic
GTCTACAAGATGGATGCAGC+TGG 0.548530 7_1:-72118801 None:intergenic
CCACCGCTTGGACAATGCAC+TGG 0.548700 7_1:-72124091 None:intergenic
GATCTTGCAATTGGACCAAA+GGG 0.551853 7_1:-72125386 None:intergenic
CCAAGCGGTGGCTTCACGAA+TGG 0.552264 7_1:+72124103 Msa1036000:CDS
CAATTGATGCTGAAATATCA+AGG 0.552746 7_1:+72118459 Msa1036000:CDS
GTCTACAAGATGGATGCAGT+TGG 0.552883 7_1:-72124607 None:intergenic
GTCTACAAGATGGATGCAGT+TGG 0.552883 7_1:-72124748 None:intergenic
GATTGAAACCCTTGAAGGAG+TGG 0.555439 7_1:-72124210 None:intergenic
CGTGTAACCACTATATTCAA+AGG 0.556800 7_1:-72119311 None:intergenic
GTGACAACAATTGTGTTCGA+TGG 0.559994 7_1:+72119085 Msa1036000:CDS
TGTCATATGAAACAAACGAT+AGG 0.560117 7_1:+72124394 Msa1036000:CDS
ACGTTACCTTTAAGAACTGT+CGG 0.560411 7_1:+72125147 Msa1036000:CDS
GCATCTAGTTGATGTGAAGC+AGG 0.560901 7_1:+72124563 Msa1036000:CDS
CGCCTGACCACTATATTCAA+AGG 0.561277 7_1:-72125285 None:intergenic
CAACAGATTGGAGACATTCA+CGG 0.561419 7_1:-72125085 None:intergenic
CAATTGGAGTTATTTATCGA+GGG 0.561755 7_1:+72126126 Msa1036000:CDS
AGTTGAACTTACAACCATCA+AGG 0.569358 7_1:-72124776 None:intergenic
GAAACCCTTGAAGGAGTGGA+AGG 0.571160 7_1:-72124206 None:intergenic
ATTTCCCAAGGAATCGCTAA+GGG 0.576777 7_1:+72124348 Msa1036000:CDS
ACAATTGGAGTTATTTATCG+AGG 0.578365 7_1:+72126125 Msa1036000:CDS
TATTCTCTGTTAATGCTCCA+AGG 0.578390 7_1:+72119338 Msa1036000:CDS
TTGGAAAATTCACACATGAG+TGG 0.580015 7_1:+72126689 Msa1036000:CDS
TAAGGGTGAAGTCTACAAGA+TGG 0.582003 7_1:-72118811 None:intergenic
GATTTCCCAAGGAATCGCTA+AGG 0.584423 7_1:+72124347 Msa1036000:CDS
TTGAAATATGTAGAGTTACA+TGG 0.587479 7_1:+72126758 Msa1036000:CDS
TCACGAATGGAGATTAAGGA+TGG 0.590728 7_1:+72124116 Msa1036000:CDS
CATTTAAACATTGTTAACTG+CGG 0.590936 7_1:+72118884 Msa1036000:CDS
TTCAAACCAGAGAAGTCCAT+AGG 0.592725 7_1:-72124519 None:intergenic
AAAGGGTCAAGTCTACAAGA+TGG 0.593500 7_1:-72124617 None:intergenic
TGTTACGGAGATCAAAATTG+AGG 0.594580 7_1:-72118344 None:intergenic
CAAGGGTGAAGTCTACAAGA+TGG 0.595854 7_1:-72124758 None:intergenic
AAGTTGAACATTGTTAACTG+TGG 0.596777 7_1:+72124831 Msa1036000:CDS
ATTAGGTGATGAATATAGAT+CGG 0.596894 7_1:+72124311 Msa1036000:CDS
TGAGTGGATTTAATAGGCGA+AGG 0.601380 7_1:+72126705 Msa1036000:CDS
TTATCCAAGTTTAGCTACAG+AGG 0.607441 7_1:+72119019 Msa1036000:CDS
TTATCCAAGTTTAGCTACAG+AGG 0.607441 7_1:+72124969 Msa1036000:CDS
AGACATTCAGAAAACAAATG+AGG 0.612064 7_1:-72119139 None:intergenic
TGACGACGATTATGTTTGAT+GGG 0.616531 7_1:+72125060 Msa1036000:CDS
CTAATTTCTAGCTACGAAGG+TGG 0.626572 7_1:+72124996 Msa1036000:CDS
TAATTGCAGTAGCAATGAAG+AGG 0.628871 7_1:+72123983 Msa1036000:intron
AAATTCTATACAGGTGATGG+TGG 0.634140 7_1:+72126872 Msa1036000:CDS
TTGCAGTAGCAATGAAGAGG+AGG 0.634334 7_1:+72123986 Msa1036000:intron
AGTCTAATTTCTAGCTACGA+AGG 0.634366 7_1:+72124993 Msa1036000:CDS
AGTGTGAGATAAGAGAGTCA+TGG 0.647270 7_1:-72124451 None:intergenic
ACAGGTAGAGAAATTAGCAG+AGG 0.648016 7_1:+72119568 Msa1036000:intron
GGCGAAGGAGAAACTATGCA+AGG 0.650033 7_1:+72126720 Msa1036000:CDS
CTGCGGGGTTGAAATTGGGG+AGG 0.658323 7_1:+72118901 Msa1036000:CDS
CAAGTGTATTATCCAAACGA+TGG 0.659474 7_1:+72118295 Msa1036000:CDS
GTTGAACTTACAACCATCAA+GGG 0.663328 7_1:-72124775 None:intergenic
AAACCAGTGCATTGTCCAAG+CGG 0.666940 7_1:+72124088 Msa1036000:CDS
TTGAATATAGTGGTTACACG+AGG 0.667234 7_1:+72119314 Msa1036000:CDS
AACTGTGGGATTCAAATTGG+GGG 0.671842 7_1:+72124846 Msa1036000:CDS
AATACACAGAATGAACATTG+AGG 0.672085 7_1:+72124938 Msa1036000:CDS
GGATGGACCAATGACTCAGA+TGG 0.676257 7_1:+72126893 Msa1036000:CDS
CCAGTGCATTGTCCAAGCGG+TGG 0.678908 7_1:+72124091 Msa1036000:CDS
AGTACACTCAATGAACATTG+AGG 0.679605 7_1:+72118988 Msa1036000:CDS
ATGTTTAAATGAAACAACGT+CGG 0.680399 7_1:-72118872 None:intergenic
TTTAAACATTGTTAACTGCG+GGG 0.686466 7_1:+72118886 Msa1036000:CDS
TGAATATAGTGGTTACACGA+GGG 0.696995 7_1:+72119315 Msa1036000:CDS
CTGAAATTGAGAGTTTGTGT+CGG 0.697841 7_1:-72118000 None:intergenic
GCATCAATAGTTATGCTGTG+AGG 0.778101 7_1:-72125248 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTACTTTTAGAAATAAAT+AGG + chr7_1:72119952-72119971 Msa1036000:intron 10.0%
!!! GTTTTTTTTTTTTTCATAAA+AGG + chr7_1:72122117-72122136 Msa1036000:intron 10.0%
!!! CATAAGTTTTTAAAAAAAAA+AGG + chr7_1:72122203-72122222 Msa1036000:intron 10.0%
!!! TTTTAAAAAAAAAAGGAAAT+AGG + chr7_1:72122210-72122229 Msa1036000:intron 10.0%
!! AATATTTATTGTTTATATGT+AGG + chr7_1:72125483-72125502 Msa1036000:intron 10.0%
!!! AATTGACTTAATTAAAATTG+AGG - chr7_1:72118104-72118123 None:intergenic 15.0%
!! TATTAAGGAAAATAAATTTC+CGG - chr7_1:72119881-72119900 None:intergenic 15.0%
!! CTTTCAGTTAAATTATATTA+AGG - chr7_1:72119896-72119915 None:intergenic 15.0%
!! AAAACGTTTGAAAAAATTAA+TGG + chr7_1:72120486-72120505 Msa1036000:intron 15.0%
!!! TTTTTTTTTTCATAAAAGGA+AGG + chr7_1:72122121-72122140 Msa1036000:intron 15.0%
!! AAATAGGCTTATATTAAAAT+GGG + chr7_1:72122226-72122245 Msa1036000:intron 15.0%
!! TAATGAAAGGAAAAAATTAT+GGG - chr7_1:72122312-72122331 None:intergenic 15.0%
!! TTAATGAAAGGAAAAAATTA+TGG - chr7_1:72122313-72122332 None:intergenic 15.0%
!!! GTATATCTATACTTTTATTA+GGG - chr7_1:72122531-72122550 None:intergenic 15.0%
!!! AGTATATCTATACTTTTATT+AGG - chr7_1:72122532-72122551 None:intergenic 15.0%
!! ATGTTAGTATAAATAATGTT+GGG - chr7_1:72122558-72122577 None:intergenic 15.0%
!! AATGTTAGTATAAATAATGT+TGG - chr7_1:72122559-72122578 None:intergenic 15.0%
!! AAAAAAAATCATACCTTTAA+CGG - chr7_1:72122940-72122959 None:intergenic 15.0%
!! TAAATATTAACAAGTAAACA+TGG - chr7_1:72125471-72125490 None:intergenic 15.0%
!! TAGACAATTAAAGATAATAA+TGG - chr7_1:72126388-72126407 None:intergenic 15.0%
!! CATATTGCAAATATTAAATA+AGG - chr7_1:72126614-72126633 None:intergenic 15.0%
!! AAAACTTACATCTGAATAAT+TGG - chr7_1:72118047-72118066 None:intergenic 20.0%
!!! AGTTTTTAAAAGGTTTCAAT+CGG + chr7_1:72118416-72118435 Msa1036000:CDS 20.0%
!! TTGAAACCAGATAAATTTAT+AGG - chr7_1:72118716-72118735 None:intergenic 20.0%
!!! AGAGAATTTTCTAAACATAT+TGG + chr7_1:72119043-72119062 Msa1036000:CDS 20.0%
!!! GAGAATTTTCTAAACATATT+GGG + chr7_1:72119044-72119063 Msa1036000:CDS 20.0%
!!! TAAAGGTAATTGTTATTTGT+GGG - chr7_1:72119533-72119552 None:intergenic 20.0%
!!! ATAAAGGTAATTGTTATTTG+TGG - chr7_1:72119534-72119553 None:intergenic 20.0%
!! ACAATTACCTTTATTGTTAA+TGG + chr7_1:72119540-72119559 Msa1036000:intron 20.0%
!!! AAATTTAGAGCTATTTATTG+AGG + chr7_1:72119616-72119635 Msa1036000:CDS 20.0%
!!! AATTTAGAGCTATTTATTGA+GGG + chr7_1:72119617-72119636 Msa1036000:CDS 20.0%
!!! TAGGTTGTTCATTTTTTTTT+TGG + chr7_1:72119747-72119766 Msa1036000:intron 20.0%
!! AAATTAATTCTGATTTCAAC+CGG + chr7_1:72119859-72119878 Msa1036000:intron 20.0%
!!! TTTTTATACTTGTTGCTATA+TGG - chr7_1:72119985-72120004 None:intergenic 20.0%
!! ATTACTTGACAAAAGAAAAT+TGG + chr7_1:72120230-72120249 Msa1036000:intron 20.0%
!! TTCTCTTGACAAAATTTATA+TGG + chr7_1:72121064-72121083 Msa1036000:intron 20.0%
!! TCTCTTGACAAAATTTATAT+GGG + chr7_1:72121065-72121084 Msa1036000:intron 20.0%
!! TAACATTGTATAGTTTACTT+TGG + chr7_1:72121239-72121258 Msa1036000:intron 20.0%
!!! TTCTACATTAAATAGTGTTT+TGG - chr7_1:72121386-72121405 None:intergenic 20.0%
!!! ATATATTTTTGTATTGCAGA+GGG + chr7_1:72121967-72121986 Msa1036000:intron 20.0%
!! TTGCTTTGACAAAAAAAAAA+AGG + chr7_1:72122080-72122099 Msa1036000:intron 20.0%
!! GAAATAGGCTTATATTAAAA+TGG + chr7_1:72122225-72122244 Msa1036000:intron 20.0%
!!! TTAATTTTGTTTTAGAAGCT+TGG - chr7_1:72122259-72122278 None:intergenic 20.0%
!!! GTATTTATAAGCTTTAATAG+AGG - chr7_1:72122500-72122519 None:intergenic 20.0%
!! TATTTATACTAACATTCAGA+TGG + chr7_1:72122563-72122582 Msa1036000:intron 20.0%
!! ATTTATACTAACATTCAGAT+GGG + chr7_1:72122564-72122583 Msa1036000:intron 20.0%
!! ATTTAAAAGAACCAAACAAT+AGG - chr7_1:72122741-72122760 None:intergenic 20.0%
!! AGTCATGTTATATAGTTTAA+CGG + chr7_1:72122771-72122790 Msa1036000:intron 20.0%
!! AAAATTCGCTAAAAACAAAA+AGG + chr7_1:72123018-72123037 Msa1036000:intron 20.0%
!! TTAAATATAGTCATATGTGT+AGG - chr7_1:72123106-72123125 None:intergenic 20.0%
!! ATGGAAAACCTAAAAAATTA+GGG - chr7_1:72123603-72123622 None:intergenic 20.0%
!! ATAATCGATAAAATACAATC+AGG - chr7_1:72124036-72124055 None:intergenic 20.0%
!!! TCGATTATATTTTCAAAGTT+AGG + chr7_1:72124048-72124067 Msa1036000:CDS 20.0%
!! AAAAAACCTTCAATAAACTT+GGG - chr7_1:72125334-72125353 None:intergenic 20.0%
!! TAAATATTTGAATTGAAGCA+AGG - chr7_1:72125555-72125574 None:intergenic 20.0%
!! TTAATACATTATATGATCCA+AGG + chr7_1:72125595-72125614 Msa1036000:intron 20.0%
!! ATTTAAAAGAACCAAACAAT+AGG - chr7_1:72122741-72122760 None:intergenic 20.0%
!!! ATCTTAATAAAGACTACTTT+TGG + chr7_1:72126157-72126176 Msa1036000:CDS 20.0%
!!! ATTGTTATTTTCCAATTTTC+AGG + chr7_1:72126652-72126671 Msa1036000:intron 20.0%
!!! TAGATTTTTAACCTGAAAAT+TGG - chr7_1:72126666-72126685 None:intergenic 20.0%
! TTACATCTGAATAATTGGTT+TGG - chr7_1:72118042-72118061 None:intergenic 25.0%
! TCTCAATTTATTCAATTCTG+AGG + chr7_1:72118073-72118092 Msa1036000:intron 25.0%
! ATATTCGATATAACACAATC+TGG - chr7_1:72118240-72118259 None:intergenic 25.0%
!! CTTTTCAAAGTTAAGTTTGA+AGG + chr7_1:72118260-72118279 Msa1036000:CDS 25.0%
! AAAGTTAAGTTTGAAGGATT+TGG + chr7_1:72118266-72118285 Msa1036000:CDS 25.0%
! TATTACAGTCAAACATGTTA+CGG - chr7_1:72118362-72118381 None:intergenic 25.0%
!!! TTTTAAAAACTGAAACTGGA+AGG - chr7_1:72118407-72118426 None:intergenic 25.0%
!! TTCCAGTTTCAGTTTTTAAA+AGG + chr7_1:72118406-72118425 Msa1036000:CDS 25.0%
!!! AACCTTTTAAAAACTGAAAC+TGG - chr7_1:72118411-72118430 None:intergenic 25.0%
!! CATTGACAAAATGATTTTCA+AGG + chr7_1:72118539-72118558 Msa1036000:intron 25.0%
! AGTCTAAAGACAAATTTGTA+TGG - chr7_1:72118635-72118654 None:intergenic 25.0%
! ATAGCACCTATAAATTTATC+TGG + chr7_1:72118707-72118726 Msa1036000:CDS 25.0%
! ATTGAACTCACAATCATTAA+GGG - chr7_1:72118831-72118850 None:intergenic 25.0%
! AATTGAACTCACAATCATTA+AGG - chr7_1:72118832-72118851 None:intergenic 25.0%
! ATGTTTAAATGAAACAACGT+CGG - chr7_1:72118875-72118894 None:intergenic 25.0%
! CATTTAAACATTGTTAACTG+CGG + chr7_1:72118884-72118903 Msa1036000:CDS 25.0%
! ATTTAAACATTGTTAACTGC+GGG + chr7_1:72118885-72118904 Msa1036000:CDS 25.0%
! TCAATTGAATATTCTTGCAA+TGG + chr7_1:72118959-72118978 Msa1036000:CDS 25.0%
! TATCATCCAACAATTCTTAA+AGG - chr7_1:72119182-72119201 None:intergenic 25.0%
! ATATAAAGTAAGCTTCCATA+TGG - chr7_1:72119421-72119440 None:intergenic 25.0%
! GTTTACACCATTAACAATAA+AGG - chr7_1:72119550-72119569 None:intergenic 25.0%
! TTATTGTTAATGGTGTAAAC+AGG + chr7_1:72119550-72119569 Msa1036000:intron 25.0%
!! TTGGATTTTAGATATTGCAA+TGG + chr7_1:72119667-72119686 Msa1036000:CDS 25.0%
!!! CATTTAACTCCATTTGTTAT+AGG + chr7_1:72119728-72119747 Msa1036000:CDS 25.0%
! AATGAACAACCTATAACAAA+TGG - chr7_1:72119740-72119759 None:intergenic 25.0%
!! GTGAATTATAGTTTTCTAGA+CGG + chr7_1:72119813-72119832 Msa1036000:intron 25.0%
! CTGCTTACATGAAAAATTAT+AGG - chr7_1:72120142-72120161 None:intergenic 25.0%
! AAGAATAAATGAGGTTTATG+TGG - chr7_1:72120187-72120206 None:intergenic 25.0%
! TTCACACAAAAGAATAAATG+AGG - chr7_1:72120196-72120215 None:intergenic 25.0%
! ATAATGCTTACACAAATAAC+AGG - chr7_1:72120685-72120704 None:intergenic 25.0%
! TATTACAGTTATATTTGTCG+AGG - chr7_1:72120728-72120747 None:intergenic 25.0%
! CATTAGTGTTATATGAATGA+TGG + chr7_1:72120794-72120813 Msa1036000:intron 25.0%
! TCAGATTGAAAATTCACATA+TGG + chr7_1:72120872-72120891 Msa1036000:intron 25.0%
! ATGGAAAATTCACATATGAT+TGG + chr7_1:72120891-72120910 Msa1036000:intron 25.0%
!! TTGTCAGTTAACAATTTTGT+AGG + chr7_1:72121181-72121200 Msa1036000:intron 25.0%
! TTGTATAGTTTACTTTGGTT+AGG + chr7_1:72121244-72121263 Msa1036000:intron 25.0%
!!! AAATTGATTTTTGACCGAAT+TGG + chr7_1:72121319-72121338 Msa1036000:intron 25.0%
! AGATTTATGTTGTAAAGAGT+GGG - chr7_1:72121736-72121755 None:intergenic 25.0%
!!! ATCTTGTTTTCTTTGCAAAA+AGG + chr7_1:72121822-72121841 Msa1036000:intron 25.0%
! TTTACATGAAGATGTCTATT+TGG - chr7_1:72121858-72121877 None:intergenic 25.0%
! TACTTAAGGGAATAATAAGA+TGG - chr7_1:72121905-72121924 None:intergenic 25.0%
! TTATCAAGTCTACTACTTAA+GGG - chr7_1:72121918-72121937 None:intergenic 25.0%
!!! GATATATTTTTGTATTGCAG+AGG + chr7_1:72121966-72121985 Msa1036000:intron 25.0%
!!! TATATTTTTGTATTGCAGAG+GGG + chr7_1:72121968-72121987 Msa1036000:intron 25.0%
! ACTTCTATGTTCTAATTAAG+CGG - chr7_1:72122153-72122172 None:intergenic 25.0%
!!! GCTTCTAAAACAAAATTAAG+AGG + chr7_1:72122260-72122279 Msa1036000:intron 25.0%
! TGTTTATACTAGCGTTTAAA+TGG + chr7_1:72122602-72122621 Msa1036000:intron 25.0%
!!! AAAAGCTTTTTCCTATTGTT+TGG + chr7_1:72122727-72122746 Msa1036000:intron 25.0%
! TTGTAAACAAATTCCGTTAA+AGG + chr7_1:72122924-72122943 Msa1036000:intron 25.0%
! TCCATGTTAATAGCATAAAT+CGG + chr7_1:72123067-72123086 Msa1036000:intron 25.0%
! TATGACTATATTTAATCCAC+CGG + chr7_1:72123111-72123130 Msa1036000:intron 25.0%
! ATTTCCAATCATACCTTTAA+CGG - chr7_1:72123463-72123482 None:intergenic 25.0%
!!! GTACTAAACCCTAATTTTTT+AGG + chr7_1:72123592-72123611 Msa1036000:intron 25.0%
! GATGGAAAACCTAAAAAATT+AGG - chr7_1:72123604-72123623 None:intergenic 25.0%
! AGGAAGCAATTATAGTTAAA+CGG - chr7_1:72123767-72123786 None:intergenic 25.0%
!! ATTTTCAAAGTTAGGTTTGA+AGG + chr7_1:72124056-72124075 Msa1036000:CDS 25.0%
! ATTAGGTGATGAATATAGAT+CGG + chr7_1:72124311-72124330 Msa1036000:CDS 25.0%
!! CAATAGAAGTTCAATACTTT+TGG - chr7_1:72124376-72124395 None:intergenic 25.0%
! ATTGAACTTGCAATCATAAA+GGG - chr7_1:72124637-72124656 None:intergenic 25.0%
! AATTGAACTTGCAATCATAA+AGG - chr7_1:72124638-72124657 None:intergenic 25.0%
!!! ACAATTGAAAGAGTATTCAA+TGG - chr7_1:72124910-72124929 None:intergenic 25.0%
!! ATTTTCAAATGACACAGTTT+TGG - chr7_1:72125200-72125219 None:intergenic 25.0%
! GACAAGATATATCTTTGTTA+TGG + chr7_1:72125307-72125326 Msa1036000:CDS 25.0%
! AAAAACCTTCAATAAACTTG+GGG - chr7_1:72125333-72125352 None:intergenic 25.0%
! CAAAAAACCTTCAATAAACT+TGG - chr7_1:72125335-72125354 None:intergenic 25.0%
!!! CAAGTTTATTGAAGGTTTTT+TGG + chr7_1:72125333-72125352 Msa1036000:CDS 25.0%
!! TAACAAGTAAACATGGTTTT+TGG - chr7_1:72125464-72125483 None:intergenic 25.0%
! TTATCTTTGATGTTGGTATT+AGG - chr7_1:72125696-72125715 None:intergenic 25.0%
! AAATGTGTTATCTTTGATGT+TGG - chr7_1:72125703-72125722 None:intergenic 25.0%
!!! AAAAGCTTTTTCCTATTGTT+TGG + chr7_1:72122727-72122746 Msa1036000:intron 25.0%
! AAAAGGAGACAATCTTAATA+TGG + chr7_1:72125904-72125923 Msa1036000:intron 25.0%
! AAAGGAGACAATCTTAATAT+GGG + chr7_1:72125905-72125924 Msa1036000:intron 25.0%
! CAAATAATCAAAAGAAACCT+AGG - chr7_1:72126013-72126032 None:intergenic 25.0%
! TGCATTAGTCATATTTAAAG+TGG - chr7_1:72126056-72126075 None:intergenic 25.0%
! TAAATATGACTAATGCAAAC+AGG + chr7_1:72126059-72126078 Msa1036000:intron 25.0%
! ATTTCAAAATCTCAGACAAT+TGG + chr7_1:72126110-72126129 Msa1036000:CDS 25.0%
! TCAGGTTAAAAATCTACATT+TGG + chr7_1:72126670-72126689 Msa1036000:intron 25.0%
! TTGAAATATGTAGAGTTACA+TGG + chr7_1:72126758-72126777 Msa1036000:CDS 25.0%
!! AGCTAACTCAATTACATTTT+TGG - chr7_1:72126795-72126814 None:intergenic 25.0%
!! CTTTATAATGACTTTTGTAG+TGG + chr7_1:72127011-72127030 Msa1036000:three_prime_UTR 25.0%
!! TCTGAATAATTGGTTTGGTT+TGG - chr7_1:72118037-72118056 None:intergenic 30.0%
CATGTTGTTAATTCGAATTC+TGG + chr7_1:72118126-72118145 Msa1036000:intron 30.0%
CAATTGATGCTGAAATATCA+AGG + chr7_1:72118459-72118478 Msa1036000:CDS 30.0%
! TCACTATGTTGATTACCTAA+TGG - chr7_1:72118516-72118535 None:intergenic 30.0%
!! TGATTTTCAAGGAATTGCTA+AGG + chr7_1:72118550-72118569 Msa1036000:intron 30.0%
!! GATTTTCAAGGAATTGCTAA+GGG + chr7_1:72118551-72118570 Msa1036000:intron 30.0%
TTTAAACATTGTTAACTGCG+GGG + chr7_1:72118886-72118905 Msa1036000:CDS 30.0%
! TCTAAACATATTGGGTTTTC+TGG + chr7_1:72119052-72119071 Msa1036000:CDS 30.0%
AGACATTCAGAAAACAAATG+AGG - chr7_1:72119142-72119161 None:intergenic 30.0%
CATTTGAGCATAATTGATTG+TGG + chr7_1:72119235-72119254 Msa1036000:CDS 30.0%
ATAATTGATTGTGGCTATGA+TGG + chr7_1:72119244-72119263 Msa1036000:CDS 30.0%
! CAAAAAACCTTTGATAACCT+TGG - chr7_1:72119358-72119377 None:intergenic 30.0%
!!! CAAGGTTATCAAAGGTTTTT+TGG + chr7_1:72119356-72119375 Msa1036000:CDS 30.0%
! ATCATAATCTCGACTACTTT+TGG + chr7_1:72119648-72119667 Msa1036000:CDS 30.0%
GGAACCTAATTTAACTCAAT+TGG + chr7_1:72120251-72120270 Msa1036000:intron 30.0%
CTTATAGAAGTTAAGCTAGT+GGG + chr7_1:72120451-72120470 Msa1036000:intron 30.0%
TTGAAATATGTAGAGTTGCA+TGG + chr7_1:72120960-72120979 Msa1036000:intron 30.0%
ATAGTTTACTTTGGTTAGGA+AGG + chr7_1:72121248-72121267 Msa1036000:intron 30.0%
CATCCAAACATAAACCAATT+CGG - chr7_1:72121336-72121355 None:intergenic 30.0%
!! GCTTCAAAGATAACTGATTT+TGG + chr7_1:72121425-72121444 Msa1036000:intron 30.0%
!! TCAAAGATAACTGATTTTGG+AGG + chr7_1:72121428-72121447 Msa1036000:intron 30.0%
!! GAAGATAACTGATTTTGAAG+AGG + chr7_1:72121450-72121469 Msa1036000:intron 30.0%
! TTCTGGAAACAAAACCATTT+CGG - chr7_1:72121700-72121719 None:intergenic 30.0%
GATTTATGTTGTAAAGAGTG+GGG - chr7_1:72121735-72121754 None:intergenic 30.0%
GAGATTTATGTTGTAAAGAG+TGG - chr7_1:72121737-72121756 None:intergenic 30.0%
TCGTAAAGTCTTCATGATAT+AGG - chr7_1:72121766-72121785 None:intergenic 30.0%
AAACAAGATTCAAGAAAGTG+AGG - chr7_1:72121811-72121830 None:intergenic 30.0%
! TTTTCTTTGCAAAAAGGCTT+TGG + chr7_1:72121828-72121847 Msa1036000:intron 30.0%
TTTCTTTGCAAAAAGGCTTT+GGG + chr7_1:72121829-72121848 Msa1036000:intron 30.0%
!! GGGAATAATAAGATGGATTA+AGG - chr7_1:72121898-72121917 None:intergenic 30.0%
CTTATCAAGTCTACTACTTA+AGG - chr7_1:72121919-72121938 None:intergenic 30.0%
TTCGCACAAATCTTAATGAA+AGG - chr7_1:72122325-72122344 None:intergenic 30.0%
TGTAGTGTATTCATAGAAAG+AGG - chr7_1:72122446-72122465 None:intergenic 30.0%
!! TTTGTTTTCTTGTTTCGTTC+AGG - chr7_1:72123232-72123251 None:intergenic 30.0%
AAATAGAAAAAACGAGCTAG+AGG + chr7_1:72123356-72123375 Msa1036000:intron 30.0%
AATAGAAAAAACGAGCTAGA+GGG + chr7_1:72123357-72123376 Msa1036000:intron 30.0%
! AAGGTGAAAAAACTAGGTTT+TGG + chr7_1:72123429-72123448 Msa1036000:intron 30.0%
!! AAAAAACTAGGTTTTGGTGA+CGG + chr7_1:72123435-72123454 Msa1036000:intron 30.0%
! ACCAAGTAATTTTCTTTTGC+AGG + chr7_1:72123704-72123723 Msa1036000:intron 30.0%
ACCTGCAAAAGAAAATTACT+TGG - chr7_1:72123708-72123727 None:intergenic 30.0%
GGAAGCAATTATAGTTAAAC+GGG - chr7_1:72123766-72123785 None:intergenic 30.0%
TTAACTATAATTGCTTCCTG+TGG + chr7_1:72123768-72123787 Msa1036000:intron 30.0%
ATGATGATAAGATACACTAC+AGG - chr7_1:72123880-72123899 None:intergenic 30.0%
AAAGTTAGGTTTGAAGGATT+TGG + chr7_1:72124062-72124081 Msa1036000:CDS 30.0%
!!! TGTTTTGGAGATCAAAGTTT+AGG - chr7_1:72124143-72124162 None:intergenic 30.0%
ATCTGAATTTGCCAAAAGAT+TGG + chr7_1:72124230-72124249 Msa1036000:CDS 30.0%
! CATGAATTGATCCAATCTTT+TGG - chr7_1:72124244-72124263 None:intergenic 30.0%
! ATCCGAGTAAATTTTCCATT+AGG + chr7_1:72124294-72124313 Msa1036000:CDS 30.0%
CACCTAATGGAAAATTTACT+CGG - chr7_1:72124299-72124318 None:intergenic 30.0%
GATCTATATTCATCACCTAA+TGG - chr7_1:72124312-72124331 None:intergenic 30.0%
TGTCATATGAAACAAACGAT+AGG + chr7_1:72124394-72124413 Msa1036000:CDS 30.0%
GTCATATGAAACAAACGATA+GGG + chr7_1:72124395-72124414 Msa1036000:CDS 30.0%
AGAGTCATGGAAAATTTGTA+TGG - chr7_1:72124441-72124460 None:intergenic 30.0%
!!! TTGCAAGTTCAATTTTGACT+TGG + chr7_1:72124644-72124663 Msa1036000:CDS 30.0%
!!! AATTTTGACTTGGAACTTTC+TGG + chr7_1:72124654-72124673 Msa1036000:CDS 30.0%
AAGTTGAACATTGTTAACTG+TGG + chr7_1:72124831-72124850 Msa1036000:CDS 30.0%
AGTTGAACATTGTTAACTGT+GGG + chr7_1:72124832-72124851 Msa1036000:CDS 30.0%
TTAACTGTGGGATTCAAATT+GGG + chr7_1:72124844-72124863 Msa1036000:CDS 30.0%
TCAATGTTCATTCTGTGTAT+TGG - chr7_1:72124939-72124958 None:intergenic 30.0%
AATACACAGAATGAACATTG+AGG + chr7_1:72124938-72124957 Msa1036000:CDS 30.0%
! ATCCAAAAGCCTTATAAACT+TGG - chr7_1:72125022-72125041 None:intergenic 30.0%
! TATAAGGCTTTTGGATTTTC+TGG + chr7_1:72125026-72125045 Msa1036000:CDS 30.0%
AAAGCTGAATAACAACAGAT+TGG - chr7_1:72125100-72125119 None:intergenic 30.0%
ATATGTTGTGATCTTGCAAT+TGG - chr7_1:72125398-72125417 None:intergenic 30.0%
GTTTAATGGAAAAACTTCCT+TGG - chr7_1:72125615-72125634 None:intergenic 30.0%
ATAACGGTATTGTCTGAATT+GGG - chr7_1:72125647-72125666 None:intergenic 30.0%
AATAACGGTATTGTCTGAAT+TGG - chr7_1:72125648-72125667 None:intergenic 30.0%
TTCAGACAATACCGTTATTA+TGG + chr7_1:72125649-72125668 Msa1036000:intron 30.0%
AATCTTAATATGGGACGATT+GGG + chr7_1:72125914-72125933 Msa1036000:intron 30.0%
AGCTGAATTAAAGAAGATCT+TGG + chr7_1:72126083-72126102 Msa1036000:CDS 30.0%
ACAATTGGAGTTATTTATCG+AGG + chr7_1:72126125-72126144 Msa1036000:CDS 30.0%
CAATTGGAGTTATTTATCGA+GGG + chr7_1:72126126-72126145 Msa1036000:CDS 30.0%
ATGAAGAGTTGAATTACTCA+CGG - chr7_1:72126232-72126251 None:intergenic 30.0%
ATCAACTACGACATGTATTT+AGG - chr7_1:72126341-72126360 None:intergenic 30.0%
TCAAATTGCGACATGTATTT+AGG + chr7_1:72126521-72126540 Msa1036000:intron 30.0%
AGTTAGCTACTCATCTATTA+AGG + chr7_1:72126807-72126826 Msa1036000:CDS 30.0%
AGTCAATTCATTTCTACAAG+TGG + chr7_1:72127038-72127057 Msa1036000:three_prime_UTR 30.0%
CTGAAATTGAGAGTTTGTGT+CGG - chr7_1:72118003-72118022 None:intergenic 35.0%
!! GAATAATTGGTTTGGTTTGG+TGG - chr7_1:72118034-72118053 None:intergenic 35.0%
CAAGTGTATTATCCAAACGA+TGG + chr7_1:72118295-72118314 Msa1036000:CDS 35.0%
TGTTACGGAGATCAAAATTG+AGG - chr7_1:72118347-72118366 None:intergenic 35.0%
TGTTCATTGAGTGTACTTCA+CGG - chr7_1:72118985-72119004 None:intergenic 35.0%
AGTACACTCAATGAACATTG+AGG + chr7_1:72118988-72119007 Msa1036000:CDS 35.0%
TTATCCAAGTTTAGCTACAG+AGG + chr7_1:72119019-72119038 Msa1036000:CDS 35.0%
TGGACTCCATGAATGTATTT+CGG + chr7_1:72119105-72119124 Msa1036000:CDS 35.0%
TGTTGTCCGAAATACATTCA+TGG - chr7_1:72119114-72119133 None:intergenic 35.0%
! ACGTCACCTTTAAGAATTGT+TGG + chr7_1:72119173-72119192 Msa1036000:CDS 35.0%
GCATCAATAGACATCCTATA+AGG - chr7_1:72119277-72119296 None:intergenic 35.0%
CTCTCATCCTTTGAATATAG+TGG + chr7_1:72119304-72119323 Msa1036000:CDS 35.0%
CGTGTAACCACTATATTCAA+AGG - chr7_1:72119314-72119333 None:intergenic 35.0%
TTGAATATAGTGGTTACACG+AGG + chr7_1:72119314-72119333 Msa1036000:CDS 35.0%
TGAATATAGTGGTTACACGA+GGG + chr7_1:72119315-72119334 Msa1036000:CDS 35.0%
TATTCTCTGTTAATGCTCCA+AGG + chr7_1:72119338-72119357 Msa1036000:CDS 35.0%
TAATGCTCCAAGGTTATCAA+AGG + chr7_1:72119348-72119367 Msa1036000:CDS 35.0%
TAAGCTTCCATATGGATGAA+TGG - chr7_1:72119413-72119432 None:intergenic 35.0%
TATGATTATGAGCACTTCAC+AGG + chr7_1:72119453-72119472 Msa1036000:CDS 35.0%
! AGAGAAATTAGCAGAGGTAT+TGG + chr7_1:72119574-72119593 Msa1036000:CDS 35.0%
TCTCGAAAAACTTTCTGTGA+CGG + chr7_1:72119700-72119719 Msa1036000:CDS 35.0%
!! TTCATGTAAGCAGTTGATAG+AGG + chr7_1:72120149-72120168 Msa1036000:intron 35.0%
CTCGCCAATTGAGTTAAATT+AGG - chr7_1:72120258-72120277 None:intergenic 35.0%
ATGATATTACAACCCTAACG+TGG + chr7_1:72120297-72120316 Msa1036000:intron 35.0%
TAAATGTTGTGACCACGTTA+GGG - chr7_1:72120312-72120331 None:intergenic 35.0%
AAAGTAGCTAGTTCGTTATG+AGG - chr7_1:72120427-72120446 None:intergenic 35.0%
GCTTATAGAAGTTAAGCTAG+TGG + chr7_1:72120450-72120469 Msa1036000:intron 35.0%
ATAACAATTCTTCTCTCACG+AGG - chr7_1:72120643-72120662 None:intergenic 35.0%
AGGAAAAGAAGAGAATATGC+AGG + chr7_1:72120921-72120940 Msa1036000:intron 35.0%
GACAAAATTTATATGGGTGC+TGG + chr7_1:72121071-72121090 Msa1036000:intron 35.0%
AAACGCTAAACAACAGACAT+TGG - chr7_1:72121114-72121133 None:intergenic 35.0%
! TGACCGAATTGGTTTATGTT+TGG + chr7_1:72121330-72121349 Msa1036000:intron 35.0%
TGGATGCAATAATGCATAAG+TGG + chr7_1:72121350-72121369 Msa1036000:intron 35.0%
! CGACAAAGAATGCAGATTTT+GGG - chr7_1:72121646-72121665 None:intergenic 35.0%
! ACGACAAAGAATGCAGATTT+TGG - chr7_1:72121647-72121666 None:intergenic 35.0%
AAACAAAACCATTTCGGACT+AGG - chr7_1:72121694-72121713 None:intergenic 35.0%
!!! GGTTTTGTTTCCAGAACTTT+AGG + chr7_1:72121704-72121723 Msa1036000:intron 35.0%
CACTCTTCGCTACAAAAAAA+AGG - chr7_1:72121999-72122018 None:intergenic 35.0%
!!! TTTTTTGTAGCGAAGAGTGT+AGG + chr7_1:72122000-72122019 Msa1036000:intron 35.0%
AGATTTGTGCGAATGATGAT+TGG + chr7_1:72122332-72122351 Msa1036000:intron 35.0%
TCATAGAAAGAGGATGGTTA+TGG - chr7_1:72122436-72122455 None:intergenic 35.0%
GTGTATTCATAGAAAGAGGA+TGG - chr7_1:72122442-72122461 None:intergenic 35.0%
!!! ACAAAAGCATCCTCAAGTTT+TGG + chr7_1:72122474-72122493 Msa1036000:intron 35.0%
TTAATAGAGGCCAAAACTTG+AGG - chr7_1:72122487-72122506 None:intergenic 35.0%
TGCTATATTGCTGATGTGAT+TGG - chr7_1:72122853-72122872 None:intergenic 35.0%
! GCCGATTTATGCTATTAACA+TGG - chr7_1:72123071-72123090 None:intergenic 35.0%
GCAGATCAAATCAATGACTT+TGG - chr7_1:72123173-72123192 None:intergenic 35.0%
GTTTCGTTCAGGTATTTGTT+CGG - chr7_1:72123221-72123240 None:intergenic 35.0%
ATAGAAAAAACGAGCTAGAG+GGG + chr7_1:72123358-72123377 Msa1036000:intron 35.0%
TGGATGAAGGTGAAAAAACT+AGG + chr7_1:72123423-72123442 Msa1036000:intron 35.0%
!! TTTAGGTTTTCCATCCAAGT+CGG + chr7_1:72123609-72123628 Msa1036000:intron 35.0%
!! TGAGATGCTTGTTGTGTTAA+GGG - chr7_1:72123637-72123656 None:intergenic 35.0%
!! TTGAGATGCTTGTTGTGTTA+AGG - chr7_1:72123638-72123657 None:intergenic 35.0%
CAAGCATCTCAATTCAAACT+AGG + chr7_1:72123646-72123665 Msa1036000:intron 35.0%
! TTTCTTTTGCAGGTTCTACT+TGG + chr7_1:72123714-72123733 Msa1036000:intron 35.0%
TAATTGCAGTAGCAATGAAG+AGG + chr7_1:72123983-72124002 Msa1036000:intron 35.0%
ATTCAGATTGAAACCCTTGA+AGG - chr7_1:72124218-72124237 None:intergenic 35.0%
! CAATTCATGCTGCATTTTCA+AGG + chr7_1:72124255-72124274 Msa1036000:CDS 35.0%
GATGAATATAGATCGGTCAT+TGG + chr7_1:72124318-72124337 Msa1036000:CDS 35.0%
! ATTGGTAGATTGATTTCCCA+AGG + chr7_1:72124336-72124355 Msa1036000:CDS 35.0%
! AAACGATAGGGATTTTGTTG+TGG + chr7_1:72124407-72124426 Msa1036000:CDS 35.0%
GTTGAACTTACAACCATCAA+GGG - chr7_1:72124778-72124797 None:intergenic 35.0%
AGTTGAACTTACAACCATCA+AGG - chr7_1:72124779-72124798 None:intergenic 35.0%
TTGTAAGTTCAACTCTGACT+TGG + chr7_1:72124785-72124804 Msa1036000:CDS 35.0%
GTTAACTGTGGGATTCAAAT+TGG + chr7_1:72124843-72124862 Msa1036000:CDS 35.0%
TAACTGTGGGATTCAAATTG+GGG + chr7_1:72124845-72124864 Msa1036000:CDS 35.0%
TTATCCAAGTTTAGCTACAG+AGG + chr7_1:72119019-72119038 Msa1036000:CDS 35.0%
!! AGTCTAATTTCTAGCTACGA+AGG + chr7_1:72124993-72125012 Msa1036000:CDS 35.0%
TGACGACGATTATGTTTGAT+GGG + chr7_1:72125060-72125079 Msa1036000:CDS 35.0%
TAAAGGTAACGTTCTCAAGT+TGG - chr7_1:72125139-72125158 None:intergenic 35.0%
! ACGTTACCTTTAAGAACTGT+CGG + chr7_1:72125147-72125166 Msa1036000:CDS 35.0%
TATGATCCGACAGTTCTTAA+AGG - chr7_1:72125156-72125175 None:intergenic 35.0%
CTCTCATCCTTTGAATATAG+TGG + chr7_1:72119304-72119323 Msa1036000:CDS 35.0%
ATCCTTTGAATATAGTGGTC+AGG + chr7_1:72125283-72125302 Msa1036000:CDS 35.0%
GAGAAAAATCCATTTCCCTT+TGG + chr7_1:72125371-72125390 Msa1036000:CDS 35.0%
GGTTGATCCCAAAATTGAAA+TGG + chr7_1:72125521-72125540 Msa1036000:intron 35.0%
TGATCCCAAAATTGAAATGG+TGG + chr7_1:72125524-72125543 Msa1036000:intron 35.0%
!! TTGGGAGTTGATTGGTTTAA+TGG - chr7_1:72125629-72125648 None:intergenic 35.0%
! ATACCGTTATTATGGTTTGC+TGG + chr7_1:72125657-72125676 Msa1036000:intron 35.0%
GAACCAGCAAACCATAATAA+CGG - chr7_1:72125663-72125682 None:intergenic 35.0%
AACTCAACTTCTTGAGTGAT+TGG - chr7_1:72125789-72125808 None:intergenic 35.0%
CAATCTTAATATGGGACGAT+TGG + chr7_1:72125913-72125932 Msa1036000:intron 35.0%
CGACATGTATTTAGGAATTG+AGG + chr7_1:72126529-72126548 Msa1036000:intron 35.0%
TTGGAAAATTCACACATGAG+TGG + chr7_1:72126689-72126708 Msa1036000:CDS 35.0%
! CACACATGAGTGGATTTAAT+AGG + chr7_1:72126699-72126718 Msa1036000:CDS 35.0%
TCTCGTGACAAATTCTATAC+AGG + chr7_1:72126863-72126882 Msa1036000:CDS 35.0%
GACAAATTCTATACAGGTGA+TGG + chr7_1:72126869-72126888 Msa1036000:CDS 35.0%
! AAATTCTATACAGGTGATGG+TGG + chr7_1:72126872-72126891 Msa1036000:CDS 35.0%
!! ATGGTTGTTGTTGGTTTGAA+GGG + chr7_1:72126912-72126931 Msa1036000:CDS 35.0%
! ACTGAAACTGGAAGGTTTTG+TGG - chr7_1:72118399-72118418 None:intergenic 40.0%
ATCGGAATTCGTCACAAGAA+TGG + chr7_1:72118434-72118453 Msa1036000:CDS 40.0%
GAAAATCCACTCGAAGTGAA+CGG - chr7_1:72118494-72118513 None:intergenic 40.0%
!! CTTCGAGTGGATTTTCCATT+AGG + chr7_1:72118498-72118517 Msa1036000:intron 40.0%
!! GCATCTTGTTGTTGTAAAGC+AGG + chr7_1:72118757-72118776 Msa1036000:CDS 40.0%
! TGTAAAGCAGGATTTGCTTC+AGG + chr7_1:72118769-72118788 Msa1036000:CDS 40.0%
! GTAAAGCAGGATTTGCTTCA+GGG + chr7_1:72118770-72118789 Msa1036000:CDS 40.0%
TAAGGGTGAAGTCTACAAGA+TGG - chr7_1:72118814-72118833 None:intergenic 40.0%
TTAACTGCGGGGTTGAAATT+GGG + chr7_1:72118897-72118916 Msa1036000:CDS 40.0%
TCTACCTCTGTAGCTAAACT+TGG - chr7_1:72119026-72119045 None:intergenic 40.0%
GTGACAACAATTGTGTTCGA+TGG + chr7_1:72119085-72119104 Msa1036000:CDS 40.0%
TTCTGAATGTCTCCAACTTG+AGG + chr7_1:72119150-72119169 Msa1036000:CDS 40.0%
ATGCTCAAATGACGTAGCTT+CGG - chr7_1:72119226-72119245 None:intergenic 40.0%
ATGATGGCATGTCTCCTTAT+AGG + chr7_1:72119260-72119279 Msa1036000:CDS 40.0%
CCATATGGATGAATGGCAAA+TGG - chr7_1:72119406-72119425 None:intergenic 40.0%
CCATTTGCCATTCATCCATA+TGG + chr7_1:72119403-72119422 Msa1036000:CDS 40.0%
ACAGGTAGAGAAATTAGCAG+AGG + chr7_1:72119568-72119587 Msa1036000:intron 40.0%
!! TAAGCAGTTGATAGAGGTCA+AGG + chr7_1:72120155-72120174 Msa1036000:intron 40.0%
GTAAATGTTGTGACCACGTT+AGG - chr7_1:72120313-72120332 None:intergenic 40.0%
CACATATGATTGGACTTCAG+AGG + chr7_1:72120901-72120920 Msa1036000:intron 40.0%
! AGTTAGCTAGTCACTTGTTG+AGG + chr7_1:72121009-72121028 Msa1036000:intron 40.0%
!! TTTATATGGGTGCTGGAAGA+TGG + chr7_1:72121078-72121097 Msa1036000:intron 40.0%
AAGAGGAGAACCAAACATGT+TGG + chr7_1:72121467-72121486 Msa1036000:intron 40.0%
!! GGTAGAGCTCGTTTTAACAA+TGG + chr7_1:72121488-72121507 Msa1036000:intron 40.0%
!! AGAGCTCGTTTTAACAATGG+AGG + chr7_1:72121491-72121510 Msa1036000:intron 40.0%
!!! ATTTTGGGTTGACTCCAAAG+TGG - chr7_1:72121631-72121650 None:intergenic 40.0%
TTTCATCACCTAGTCCGAAA+TGG + chr7_1:72121683-72121702 Msa1036000:intron 40.0%
TGGAGAGAAGATAGAGGATA+AGG - chr7_1:72122416-72122435 None:intergenic 40.0%
TGGTTATGGAGAGAAGATAG+AGG - chr7_1:72122422-72122441 None:intergenic 40.0%
AGTCATCAATGTTGCAGATC+CGG - chr7_1:72123150-72123169 None:intergenic 40.0%
!! GTCATTGATTTGATCTGCAC+TGG + chr7_1:72123175-72123194 Msa1036000:intron 40.0%
!! GAGATGCTTGTTGTGTTAAG+GGG - chr7_1:72123636-72123655 None:intergenic 40.0%
CTAAGACTAAGATACACCAC+AGG - chr7_1:72123787-72123806 None:intergenic 40.0%
CAATCAGGCAACTCAATCTT+GGG - chr7_1:72124021-72124040 None:intergenic 40.0%
ACAATCAGGCAACTCAATCT+TGG - chr7_1:72124022-72124041 None:intergenic 40.0%
TCACGAATGGAGATTAAGGA+TGG + chr7_1:72124116-72124135 Msa1036000:CDS 40.0%
! AGCGAAGCTCAAACATGTTT+TGG - chr7_1:72124158-72124177 None:intergenic 40.0%
ATTTCCCAAGGAATCGCTAA+GGG + chr7_1:72124348-72124367 Msa1036000:CDS 40.0%
AGTGTGAGATAAGAGAGTCA+TGG - chr7_1:72124454-72124473 None:intergenic 40.0%
TTCAAACCAGAGAAGTCCAT+AGG - chr7_1:72124522-72124541 None:intergenic 40.0%
AAAGGGTCAAGTCTACAAGA+TGG - chr7_1:72124620-72124639 None:intergenic 40.0%
GTGAAGCAAGATATGCTTCA+TGG + chr7_1:72124717-72124736 Msa1036000:CDS 40.0%
AACTGTGGGATTCAAATTGG+GGG + chr7_1:72124846-72124865 Msa1036000:CDS 40.0%
ACTACCTCTGTAGCTAAACT+TGG - chr7_1:72124976-72124995 None:intergenic 40.0%
!! CTAATTTCTAGCTACGAAGG+TGG + chr7_1:72124996-72125015 Msa1036000:CDS 40.0%
! GGCCAAGTTTATAAGGCTTT+TGG + chr7_1:72125017-72125036 Msa1036000:CDS 40.0%
GTGACGACGATTATGTTTGA+TGG + chr7_1:72125059-72125078 Msa1036000:CDS 40.0%
CAACAGATTGGAGACATTCA+CGG - chr7_1:72125088-72125107 None:intergenic 40.0%
TTATGCTGTGAGGATGTTCA+TGG - chr7_1:72125241-72125260 None:intergenic 40.0%
GCATCAATAGTTATGCTGTG+AGG - chr7_1:72125251-72125270 None:intergenic 40.0%
TATGGCCCCAAGTTTATTGA+AGG + chr7_1:72125325-72125344 Msa1036000:CDS 40.0%
GATCTTGCAATTGGACCAAA+GGG - chr7_1:72125389-72125408 None:intergenic 40.0%
TGATCTTGCAATTGGACCAA+AGG - chr7_1:72125390-72125409 None:intergenic 40.0%
! CGCACCACCATTTCAATTTT+GGG - chr7_1:72125531-72125550 None:intergenic 40.0%
! CCAAAATTGAAATGGTGGTG+CGG + chr7_1:72125529-72125548 Msa1036000:intron 40.0%
! TGTCTGAATTGGGAGTTGAT+TGG - chr7_1:72125637-72125656 None:intergenic 40.0%
! TTTGCTGCTATTGATTGCCT+AGG + chr7_1:72125993-72126012 Msa1036000:intron 40.0%
! TGAGTGGATTTAATAGGCGA+AGG + chr7_1:72126705-72126724 Msa1036000:CDS 40.0%
ACAACAACCATCTGAGTCAT+TGG - chr7_1:72126903-72126922 None:intergenic 40.0%
ATGACTCAGATGGTTGTTGT+TGG + chr7_1:72126903-72126922 Msa1036000:CDS 40.0%
!! GATGGTTGTTGTTGGTTTGA+AGG + chr7_1:72126911-72126930 Msa1036000:CDS 40.0%
CCATTCATGAAGCCATCGTT+TGG - chr7_1:72118310-72118329 None:intergenic 45.0%
CCAAACGATGGCTTCATGAA+TGG + chr7_1:72118307-72118326 Msa1036000:CDS 45.0%
GTTAACTGCGGGGTTGAAAT+TGG + chr7_1:72118896-72118915 Msa1036000:CDS 45.0%
TAACTGCGGGGTTGAAATTG+GGG + chr7_1:72118898-72118917 Msa1036000:CDS 45.0%
TAAAGGTGACGTCCTCAAGT+TGG - chr7_1:72119165-72119184 None:intergenic 45.0%
GGCAAATGGAGTTTCTTCTC+TGG - chr7_1:72119392-72119411 None:intergenic 45.0%
! GGTGCTGGAAGATGGAATAA+GGG + chr7_1:72121086-72121105 Msa1036000:intron 45.0%
GTGCTGGAAGATGGAATAAG+GGG + chr7_1:72121087-72121106 Msa1036000:intron 45.0%
ACGAGCTCTACCAACATGTT+TGG - chr7_1:72121480-72121499 None:intergenic 45.0%
TGGGGTGTAACCTAAAGTTC+TGG - chr7_1:72121717-72121736 None:intergenic 45.0%
ATCCGGAGACATGAGTATTC+CGG - chr7_1:72123133-72123152 None:intergenic 45.0%
CACCAAAGAGGGGTGATTTA+GGG - chr7_1:72123405-72123424 None:intergenic 45.0%
TCACCTTCATCCACCAAAGA+GGG - chr7_1:72123416-72123435 None:intergenic 45.0%
TTCACCTTCATCCACCAAAG+AGG - chr7_1:72123417-72123436 None:intergenic 45.0%
! GGCTCCGTTAAAGGTATGAT+TGG + chr7_1:72123456-72123475 Msa1036000:intron 45.0%
TTGGTTGTTGTAGAAGACGC+TGG - chr7_1:72123689-72123708 None:intergenic 45.0%
TTGCAGTAGCAATGAAGAGG+AGG + chr7_1:72123986-72124005 Msa1036000:intron 45.0%
AAACCAGTGCATTGTCCAAG+CGG + chr7_1:72124088-72124107 Msa1036000:CDS 45.0%
GGCTTCACGAATGGAGATTA+AGG + chr7_1:72124112-72124131 Msa1036000:CDS 45.0%
! TGAAGGAGTGGAAGGCTTTT+CGG - chr7_1:72124201-72124220 None:intergenic 45.0%
AAAAGCCTTCCACTCCTTCA+AGG + chr7_1:72124201-72124220 Msa1036000:CDS 45.0%
AAAGCCTTCCACTCCTTCAA+GGG + chr7_1:72124202-72124221 Msa1036000:CDS 45.0%
GATTGAAACCCTTGAAGGAG+TGG - chr7_1:72124213-72124232 None:intergenic 45.0%
GATTTCCCAAGGAATCGCTA+AGG + chr7_1:72124347-72124366 Msa1036000:CDS 45.0%
!! AGAAGTCCATAGGTGCTACT+AGG - chr7_1:72124512-72124531 None:intergenic 45.0%
! GCATCTAGTTGATGTGAAGC+AGG + chr7_1:72124563-72124582 Msa1036000:CDS 45.0%
GTGAAGCAGGATATGCTTCA+TGG + chr7_1:72124576-72124595 Msa1036000:CDS 45.0%
GTCTACAAGATGGATGCAGT+TGG - chr7_1:72124610-72124629 None:intergenic 45.0%
GTCTACAAGATGGATGCAGT+TGG - chr7_1:72124610-72124629 None:intergenic 45.0%
CAAGGGTGAAGTCTACAAGA+TGG - chr7_1:72124761-72124780 None:intergenic 45.0%
CTTGTAGACTTCACCCTTGA+TGG + chr7_1:72124762-72124781 Msa1036000:CDS 45.0%
CGAAGGTGGCCAAGTTTATA+AGG + chr7_1:72125010-72125029 Msa1036000:CDS 45.0%
CGCCTGACCACTATATTCAA+AGG - chr7_1:72125288-72125307 None:intergenic 45.0%
GCAATTGGACCAAAGGGAAA+TGG - chr7_1:72125383-72125402 None:intergenic 45.0%
! CCGCACCACCATTTCAATTT+TGG - chr7_1:72125532-72125551 None:intergenic 45.0%
CTCGTTCTGCGTTGCAAAAA+AGG + chr7_1:72125887-72125906 Msa1036000:intron 45.0%
CTGCAAATTGCTGCTCCATA+GGG + chr7_1:72125948-72125967 Msa1036000:intron 45.0%
TCAATAGCAGCAAACAACGC+TGG - chr7_1:72125987-72126006 None:intergenic 45.0%
!! TCTATACAGGTGATGGTGGA+TGG + chr7_1:72126876-72126895 Msa1036000:CDS 45.0%
!!! GATTTTTAAATTAAAAAAAA+TGG + chr7_1:72120368-72120387 Msa1036000:intron 5.0%
!! TGATAATTAAAAAAAAAAAT+TGG - chr7_1:72122389-72122408 None:intergenic 5.0%
!!! TTTTAATTTAATTATAATTC+TGG + chr7_1:72123946-72123965 Msa1036000:intron 5.0%
CATGATCCGTTCACTTCGAG+TGG + chr7_1:72118485-72118504 Msa1036000:intron 50.0%
GTCTACAAGATGGATGCAGC+TGG - chr7_1:72118804-72118823 None:intergenic 50.0%
!! GGGTGCTGGAAGATGGAATA+AGG + chr7_1:72121085-72121104 Msa1036000:intron 50.0%
!! AAAGTGGTGATGGTGGAGGA+GGG - chr7_1:72121615-72121634 None:intergenic 50.0%
!! TGACTCCAAAGTGGTGATGG+TGG - chr7_1:72121622-72121641 None:intergenic 50.0%
! GGTTGACTCCAAAGTGGTGA+TGG - chr7_1:72121625-72121644 None:intergenic 50.0%
! CGGACTAGGTGATGAAACGA+TGG - chr7_1:72121680-72121699 None:intergenic 50.0%
CACCGGAATACTCATGTCTC+CGG + chr7_1:72123128-72123147 Msa1036000:intron 50.0%
TTCGTCGTCTTTGTACGACG+TGG - chr7_1:72123255-72123274 None:intergenic 50.0%
! ACGAGCTAGAGGGGTGATTT+TGG + chr7_1:72123367-72123386 Msa1036000:intron 50.0%
! CGAGCTAGAGGGGTGATTTT+GGG + chr7_1:72123368-72123387 Msa1036000:intron 50.0%
GACCCTAAATCACCCCTCTT+TGG + chr7_1:72123400-72123419 Msa1036000:intron 50.0%
CCACCAAAGAGGGGTGATTT+AGG - chr7_1:72123406-72123425 None:intergenic 50.0%
CCTAAATCACCCCTCTTTGG+TGG + chr7_1:72123403-72123422 Msa1036000:intron 50.0%
CACCTTCATCCACCAAAGAG+GGG - chr7_1:72123415-72123434 None:intergenic 50.0%
!! TTTGGTGACGGCTCCGTTAA+AGG + chr7_1:72123447-72123466 Msa1036000:intron 50.0%
TTGTGTTAAGGGGACCGACT+TGG - chr7_1:72123626-72123645 None:intergenic 50.0%
GAAACCCTTGAAGGAGTGGA+AGG - chr7_1:72124209-72124228 None:intergenic 50.0%
GTAGCACCTATGGACTTCTC+TGG + chr7_1:72124513-72124532 Msa1036000:CDS 50.0%
GGATTCAAATTGGGGGAGTG+AGG + chr7_1:72124853-72124872 Msa1036000:CDS 50.0%
TGTAGGTTGTCAACGCGTAG+CGG + chr7_1:72125500-72125519 Msa1036000:intron 50.0%
GCTGCAAATTGCTGCTCCAT+AGG + chr7_1:72125947-72125966 Msa1036000:intron 50.0%
AAACAACGCTGGTGTCTTGG+TGG - chr7_1:72125976-72125995 None:intergenic 50.0%
AGCAAACAACGCTGGTGTCT+TGG - chr7_1:72125979-72125998 None:intergenic 50.0%
GGCGAAGGAGAAACTATGCA+AGG + chr7_1:72126720-72126739 Msa1036000:CDS 50.0%
GGATGGACCAATGACTCAGA+TGG + chr7_1:72126893-72126912 Msa1036000:CDS 50.0%
!! CAAAGTGGTGATGGTGGAGG+AGG - chr7_1:72121616-72121635 None:intergenic 55.0%
CTCCTCCACCATCACCACTT+TGG + chr7_1:72121614-72121633 Msa1036000:intron 55.0%
!! CTCCAAAGTGGTGATGGTGG+AGG - chr7_1:72121619-72121638 None:intergenic 55.0%
CGGAGACATGAGTATTCCGG+TGG - chr7_1:72123130-72123149 None:intergenic 55.0%
! CACCCCTCTTTGGTGGATGA+AGG + chr7_1:72123410-72123429 Msa1036000:intron 55.0%
!! GTTAAGGGGACCGACTTGGA+TGG - chr7_1:72123622-72123641 None:intergenic 55.0%
GGCTCCCTTAGCGATTCCTT+GGG - chr7_1:72124355-72124374 None:intergenic 55.0%
TGGCTCCCTTAGCGATTCCT+TGG - chr7_1:72124356-72124375 None:intergenic 55.0%
GTGCTGCCTAGTAGCACCTA+TGG + chr7_1:72124503-72124522 Msa1036000:CDS 55.0%
GGGACGATTGGGAGTTGTTG+TGG + chr7_1:72125925-72125944 Msa1036000:intron 55.0%
GGTGTCTTGGTGGAACCCTA+TGG - chr7_1:72125966-72125985 None:intergenic 55.0%
CTGCGGGGTTGAAATTGGGG+AGG + chr7_1:72118901-72118920 Msa1036000:CDS 60.0%
GGGAGAGAGAGGGAGAGAGA+GGG - chr7_1:72121543-72121562 None:intergenic 60.0%
AGGGAGAGAGAGGGAGAGAG+AGG - chr7_1:72121544-72121563 None:intergenic 60.0%
GAGAGAGGGAGAGGGAGAGA+GGG - chr7_1:72121593-72121612 None:intergenic 60.0%
!! GATGGTGGAGGAGGGAGAGA+GGG - chr7_1:72121607-72121626 None:intergenic 60.0%
!! TGATGGTGGAGGAGGGAGAG+AGG - chr7_1:72121608-72121627 None:intergenic 60.0%
CCACCGCTTGGACAATGCAC+TGG - chr7_1:72124094-72124113 None:intergenic 60.0%
CCAGTGCATTGTCCAAGCGG+TGG + chr7_1:72124091-72124110 Msa1036000:CDS 60.0%
CCATTCGTGAAGCCACCGCT+TGG - chr7_1:72124106-72124125 None:intergenic 60.0%
CCAAGCGGTGGCTTCACGAA+TGG + chr7_1:72124103-72124122 Msa1036000:CDS 60.0%
GAGGGGGAGAGGGAGAGAGA+GGG - chr7_1:72121563-72121582 None:intergenic 65.0%
AGAGGGGGAGAGGGAGAGAG+AGG - chr7_1:72121564-72121583 None:intergenic 65.0%
GAGAGAGGGAGAGGGAGAGG+GGG - chr7_1:72121579-72121598 None:intergenic 65.0%
GGAGAGAGGGAGAGGGAGAG+GGG - chr7_1:72121580-72121599 None:intergenic 65.0%
GGGAGAGAGGGAGAGGGAGA+GGG - chr7_1:72121581-72121600 None:intergenic 65.0%
AGGGAGAGAGGGAGAGGGAG+AGG - chr7_1:72121582-72121601 None:intergenic 65.0%
GGGAGAGGGAGAGAGGGAGA+GGG - chr7_1:72121587-72121606 None:intergenic 65.0%
AGGGAGAGGGAGAGAGGGAG+AGG - chr7_1:72121588-72121607 None:intergenic 65.0%
GGAGAGAGGGAGAGGGAGAG+AGG - chr7_1:72121580-72121599 None:intergenic 65.0%
GGAGGAGGGAGAGAGGGAGA+GGG - chr7_1:72121601-72121620 None:intergenic 65.0%
TGGAGGAGGGAGAGAGGGAG+AGG - chr7_1:72121602-72121621 None:intergenic 65.0%
GGGAGAGGGAGAGGGGGAGA+GGG - chr7_1:72121573-72121592 None:intergenic 70.0%
AGGGAGAGGGAGAGGGGGAG+AGG - chr7_1:72121574-72121593 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72117941 72127156 72117941 ID=Msa1036000;Name=Msa1036000
chr7_1 mRNA 72117941 72127156 72117941 ID=Msa1036000-mRNA-1;Parent=Msa1036000;Name=Msa1036000-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0.28|1|0.83|0.71|7|159|1149
chr7_1 exon 72117941 72118057 72117941 ID=Msa1036000-mRNA-1:exon:17519;Parent=Msa1036000-mRNA-1
chr7_1 exon 72118174 72118480 72118174 ID=Msa1036000-mRNA-1:exon:17520;Parent=Msa1036000-mRNA-1
chr7_1 exon 72118561 72119474 72118561 ID=Msa1036000-mRNA-1:exon:17521;Parent=Msa1036000-mRNA-1
chr7_1 exon 72119572 72119749 72119572 ID=Msa1036000-mRNA-1:exon:17522;Parent=Msa1036000-mRNA-1
chr7_1 exon 72123992 72125451 72123992 ID=Msa1036000-mRNA-1:exon:17523;Parent=Msa1036000-mRNA-1
chr7_1 exon 72126081 72126230 72126081 ID=Msa1036000-mRNA-1:exon:17524;Parent=Msa1036000-mRNA-1
chr7_1 exon 72126674 72127156 72126674 ID=Msa1036000-mRNA-1:exon:17525;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72117941 72118057 72117941 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72118174 72118480 72118174 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72118561 72119474 72118561 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72119572 72119749 72119572 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72123992 72125451 72123992 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72126081 72126230 72126081 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 CDS 72126674 72126997 72126674 ID=Msa1036000-mRNA-1:cds;Parent=Msa1036000-mRNA-1
chr7_1 three_prime_UTR 72126998 72127156 72126998 ID=Msa1036000-mRNA-1:three_prime_utr;Parent=Msa1036000-mRNA-1
Gene Sequence

>Msa1036000

ATACGCTTCTTATCTGACTACGTAACTACTGTATACATAGATCTCAATCTCAATCTCAGCCGACACAAACTCTCAATTTCAGTGTATTCTCCACCAAACCAAACCAATTATTCAGATTTTATGTTGTTATTGTTTGCAGCAGCAGCGATGAATAAGAGTAAAAAGCTAAAGAGTGAGTTACCAGATTGTGTTATATCGAATATCTTTTCAAAGTTAAGTTTGAAGGATTTGGTTAAAACAAGTGTATTATCCAAACGATGGCTTCATGAATGGAGATTAAGAATTGACCTCAATTTTGATCTCCGTAACATGTTTGACTGTAATACAATTCAAGAATTACCACAAAACCTTCCAGTTTCAGTTTTTAAAAGGTTTCAATCGGAATTCGTCACAAGAATGGATCAATTGATGCTGAAATATCAAGGAATTGCTAAGGGTGTCGAACGTATTGAACTGCTCTTCTCATATCAAACTAATGCTGATTTTGAAATAGAGCCATACAAATTTGTCTTTAGACTCTTATCTCTCAATGATTCTTTGACGTATCTGCATCTACAGAAGTGCGACTTGATAGCACCTATAAATTTATCTGGTTTCAATAATTTGAGAACTCTTGTGTTGCATCTTGTTGTTGTAAAGCAGGATTTGCTTCAGGGTATGTTGTCCAGCTGCATCCATCTTGTAGACTTCACCCTTAATGATTGTGAGTTCAATTCTGACTTGAAAATAATTAGTCCGACGTTGTTTCATTTAAACATTGTTAACTGCGGGGTTGAAATTGGGGAGGAAAAGAATATAGATATCATTGCATCAAATCTGTCGTCAATTGAATATTCTTGCAATGGCCGTGAAGTACACTCAATGAACATTGAGGCTCATATGTTATCCAAGTTTAGCTACAGAGGTAGAGAATTTTCTAAACATATTGGGTTTTCTGGATTGAAGAATGTGACAACAATTGTGTTCGATGGACTCCATGAATGTATTTCGGACAACATTGTGCCTCATTTGTTTTCTGAATGTCTCCAACTTGAGGACGTCACCTTTAAGAATTGTTGGATGATATGTCGAATGAAAATTATCAGTCCGAAGCTACGTCATTTGAGCATAATTGATTGTGGCTATGATGGCATGTCTCCTTATAGGATGTCTATTGATGCATTGAATCTCTCATCCTTTGAATATAGTGGTTACACGAGGGTATTCTCTGTTAATGCTCCAAGGTTATCAAAGGTTTTTTGGAATGCAACTACCAGAGAAGAAACTCCATTTGCCATTCATCCATATGGAAGCTTACTTTATATTGAGAATTTAACTATGATTATGAGCACTTCACAGGTAGAGAAATTAGCAGAGGTATTGGTCGAATTTCAAAATCTAAAAAATTTAGAGCTATTTATTGAGGGAGCATATGATCATAATCTCGACTACTTTTGGATTTTAGATATTGCAATGGCTTCTCATCATCTCGAAAAACTTTCTGTGACGGTGAGTCATTTAACTCCATTTGTTATAGTAGCAATGAAGAGGAGGTCTAAAAAGCCCAAGATTGAGTTGCCTGATTGTATTTTATCGATTATATTTTCAAAGTTAGGTTTGAAGGATTTGGTGAAAACCAGTGCATTGTCCAAGCGGTGGCTTCACGAATGGAGATTAAGGATGGACCTAAACTTTGATCTCCAAAACATGTTTGAGCTTCGCTATAATACAGTTCAAGAGTTACCGAAAAGCCTTCCACTCCTTCAAGGGTTTCAATCTGAATTTGCCAAAAGATTGGATCAATTCATGCTGCATTTTCAAGGTGATATGATTAGTTCAATCCGAGTAAATTTTCCATTAGGTGATGAATATAGATCGGTCATTGGTAGATTGATTTCCCAAGGAATCGCTAAGGGAGCCAAAAGTATTGAACTTCTATTGTCATATGAAACAAACGATAGGGATTTTGTTGTGGAAATAGAGCCATACAAATTTTCCATGACTCTCTTATCTCACACTGATTCTCTGACGAATTTGCATTTACAGAAGTGCTGCCTAGTAGCACCTATGGACTTCTCTGGTTTGAAAAATTTAAGAACACTTGTGTTGCATCTAGTTGATGTGAAGCAGGATATGCTTCATGGCATATTTTCCAACTGCATCCATCTTGTAGACTTGACCCTTTATGATTGCAAGTTCAATTTTGACTTGGAACTTTCTGGATTGAAGAATTTGAGAACTCTTGTGTTGCATCTAGTTTCAGTGAAGCAAGATATGCTTCATGGTTTGTTTTCCAACTGCATCCATCTTGTAGACTTCACCCTTGATGGTTGTAAGTTCAACTCTGACTTGGAAATAAACAGTTCAGCATTGTTAAAGTTGAACATTGTTAACTGTGGGATTCAAATTGGGGGAGTGAGGAGAATAGATATCATTGCATCAAATCTCTCATCCATTGAATACTCTTTCAATTGTTATTATCCAATACACAGAATGAACATTGAGGCTCAAATGTTATCCAAGTTTAGCTACAGAGGTAGTCTAATTTCTAGCTACGAAGGTGGCCAAGTTTATAAGGCTTTTGGATTTTCTGGACTGAAAAATGTGACGACGATTATGTTTGATGGGCTCCGTGAATGTCTCCAATCTGTTGTTATTCAGCTTTTGTTTTCTGAATGTCTCCAACTTGAGAACGTTACCTTTAAGAACTGTCGGATCATATATAATTTGAATATTGTCAGTCCAAAACTGTGTCATTTGAAAATAATAGAATGTGACTATAACCATGAACATCCTCACAGCATAACTATTGATGCATTGAATCTCTCATCCTTTGAATATAGTGGTCAGGCGACAAGATATATCTTTGTTATGGCCCCAAGTTTATTGAAGGTTTTTTGGAATGCTGCTAAAAGAGAGAAAAATCCATTTCCCTTTGGTCCAATTGCAAGATCACAACATATTGAGAATTTAGTTATGATATTGAGTACTTCACAAGTAGCTGAATTAAAGAAGATCTTGGTTAAATTTCAAAATCTCAGACAATTGGAGTTATTTATCGAGGGAGCATATGATCTTAATAAAGACTACTTTTGGATTTTAGATATTGCTATGTCTTCTCGACATCTTCAAAAACTTTCTCTTACCGTTAAAAATCTACATTTGGAAAATTCACACATGAGTGGATTTAATAGGCGAAGGAGAAACTATGCAAGGTTTTTTCATAATGAATTGAAATATGTAGAGTTACATGGTTGTGTTTGCTCCAAAAATGTAATTGAGTTAGCTACTCATCTATTAAGGAAAGCAAATTCTCTTAAGCAAATTACTTTCAGTTCTCGTGACAAATTCTATACAGGTGATGGTGGATGGACCAATGACTCAGATGGTTGTTGTTGGTTTGAAGGGAATCTTATTCATAAGATGCTTAAAGATGAAGTACATGAACAATGTCAACTTATAATTTTCTAA
Protein sequence

>Msa1036000

IRFLSDYVTTVYIDLNLNLSRHKLSISVYSPPNQTNYSDFMLLLFAAAAMNKSKKLKSELPDCVISNIFSKLSLKDLVKTSVLSKRWLHEWRLRIDLNFDLRNMFDCNTIQELPQNLPVSVFKRFQSEFVTRMDQLMLKYQGIAKGVERIELLFSYQTNADFEIEPYKFVFRLLSLNDSLTYLHLQKCDLIAPINLSGFNNLRTLVLHLVVVKQDLLQGMLSSCIHLVDFTLNDCEFNSDLKIISPTLFHLNIVNCGVEIGEEKNIDIIASNLSSIEYSCNGREVHSMNIEAHMLSKFSYRGREFSKHIGFSGLKNVTTIVFDGLHECISDNIVPHLFSECLQLEDVTFKNCWMICRMKIISPKLRHLSIIDCGYDGMSPYRMSIDALNLSSFEYSGYTRVFSVNAPRLSKVFWNATTREETPFAIHPYGSLLYIENLTMIMSTSQVEKLAEVLVEFQNLKNLELFIEGAYDHNLDYFWILDIAMASHHLEKLSVTVSHLTPFVIVAMKRRSKKPKIELPDCILSIIFSKLGLKDLVKTSALSKRWLHEWRLRMDLNFDLQNMFELRYNTVQELPKSLPLLQGFQSEFAKRLDQFMLHFQGDMISSIRVNFPLGDEYRSVIGRLISQGIAKGAKSIELLLSYETNDRDFVVEIEPYKFSMTLLSHTDSLTNLHLQKCCLVAPMDFSGLKNLRTLVLHLVDVKQDMLHGIFSNCIHLVDLTLYDCKFNFDLELSGLKNLRTLVLHLVSVKQDMLHGLFSNCIHLVDFTLDGCKFNSDLEINSSALLKLNIVNCGIQIGGVRRIDIIASNLSSIEYSFNCYYPIHRMNIEAQMLSKFSYRGSLISSYEGGQVYKAFGFSGLKNVTTIMFDGLRECLQSVVIQLLFSECLQLENVTFKNCRIIYNLNIVSPKLCHLKIIECDYNHEHPHSITIDALNLSSFEYSGQATRYIFVMAPSLLKVFWNAAKREKNPFPFGPIARSQHIENLVMILSTSQVAELKKILVKFQNLRQLELFIEGAYDLNKDYFWILDIAMSSRHLQKLSLTVKNLHLENSHMSGFNRRRRNYARFFHNELKYVELHGCVCSKNVIELATHLLRKANSLKQITFSSRDKFYTGDGGWTNDSDGCCWFEGNLIHKMLKDEVHEQCQLIIF*