Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1035930 | KEH23803.1 | 51.818 | 440 | 172 | 9 | 485 | 896 | 7 | 434 | 8.29e-115 | 374 |
Msa1035930 | KEH23803.1 | 84.211 | 532 | 73 | 3 | 1 | 523 | 9 | 538 | 0.0 | 884 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1035930 | A0A072U3S5 | 51.818 | 440 | 172 | 9 | 485 | 896 | 7 | 434 | 3.96e-115 | 374 |
Msa1035930 | A0A072U3S5 | 84.211 | 532 | 73 | 3 | 1 | 523 | 9 | 538 | 0.0 | 884 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008220 | Msa1035930 | 0.817447 | 3.281453e-52 | -8.615850e-47 |
Msa0010770 | Msa1035930 | 0.805789 | 1.126521e-49 | -8.615850e-47 |
Msa0027390 | Msa1035930 | 0.809839 | 1.551536e-50 | -8.615850e-47 |
Msa0030280 | Msa1035930 | 0.806989 | 6.291624e-50 | -8.615850e-47 |
Msa0031180 | Msa1035930 | 0.804292 | 2.317191e-49 | -8.615850e-47 |
Msa0031820 | Msa1035930 | 0.804304 | 2.303226e-49 | -8.615850e-47 |
Msa0037120 | Msa1035930 | 0.807355 | 5.264384e-50 | -8.615850e-47 |
Msa0054820 | Msa1035930 | 0.804415 | 2.183868e-49 | -8.615850e-47 |
Msa0057370 | Msa1035930 | 0.812127 | 4.956994e-51 | -8.615850e-47 |
Msa0078480 | Msa1035930 | 0.818631 | 1.772201e-52 | -8.615850e-47 |
Msa0084340 | Msa1035930 | 0.805453 | 1.325478e-49 | -8.615850e-47 |
Msa0085370 | Msa1035930 | 0.809795 | 1.585812e-50 | -8.615850e-47 |
Msa0090030 | Msa1035930 | 0.804622 | 1.977505e-49 | -8.615850e-47 |
Msa0092440 | Msa1035930 | 0.823906 | 1.076119e-53 | -8.615850e-47 |
Msa0096580 | Msa1035930 | 0.820430 | 6.888899e-53 | -8.615850e-47 |
Msa0610500 | Msa1035930 | 0.815003 | 1.154666e-51 | -8.615850e-47 |
Msa0641730 | Msa1035930 | 0.809937 | 1.478374e-50 | -8.615850e-47 |
Msa0651150 | Msa1035930 | 0.826209 | 3.075481e-54 | -8.615850e-47 |
Msa0651270 | Msa1035930 | 0.800931 | 1.143279e-48 | -8.615850e-47 |
Msa0682090 | Msa1035930 | 0.803740 | 3.018281e-49 | -8.615850e-47 |
Msa0682140 | Msa1035930 | 0.804193 | 2.429026e-49 | -8.615850e-47 |
Msa0689760 | Msa1035930 | 0.807853 | 4.127011e-50 | -8.615850e-47 |
Msa0716860 | Msa1035930 | 0.802459 | 5.554524e-49 | -8.615850e-47 |
Msa0741160 | Msa1035930 | 0.814149 | 1.784852e-51 | -8.615850e-47 |
Msa0756530 | Msa1035930 | 0.831118 | 2.001307e-55 | -8.615850e-47 |
Msa0780280 | Msa1035930 | 0.846154 | 2.595870e-59 | -8.615850e-47 |
Msa0795660 | Msa1035930 | 0.821911 | 3.139402e-53 | -8.615850e-47 |
Msa0800700 | Msa1035930 | 0.809471 | 1.861481e-50 | -8.615850e-47 |
Msa0821800 | Msa1035930 | 0.840327 | 9.298280e-58 | -8.615850e-47 |
Msa0126230 | Msa1035930 | 0.825632 | 4.217689e-54 | -8.615850e-47 |
Msa0133720 | Msa1035930 | 0.804860 | 1.763469e-49 | -8.615850e-47 |
Msa0133820 | Msa1035930 | 0.805371 | 1.378491e-49 | -8.615850e-47 |
Msa0135420 | Msa1035930 | 0.807289 | 5.436517e-50 | -8.615850e-47 |
Msa0138210 | Msa1035930 | 0.824003 | 1.021164e-53 | -8.615850e-47 |
Msa0143850 | Msa1035930 | 0.829430 | 5.171623e-55 | -8.615850e-47 |
Msa0160670 | Msa1035930 | 0.824793 | 6.656233e-54 | -8.615850e-47 |
Msa0165300 | Msa1035930 | 0.818303 | 2.102767e-52 | -8.615850e-47 |
Msa0174360 | Msa1035930 | 0.810244 | 1.269435e-50 | -8.615850e-47 |
Msa0177170 | Msa1035930 | 0.812287 | 4.573937e-51 | -8.615850e-47 |
Msa0179000 | Msa1035930 | 0.820441 | 6.847738e-53 | -8.615850e-47 |
Msa0185510 | Msa1035930 | 0.808977 | 2.375598e-50 | -8.615850e-47 |
Msa0208810 | Msa1035930 | 0.811817 | 5.791347e-51 | -8.615850e-47 |
Msa0227230 | Msa1035930 | 0.803034 | 4.226703e-49 | -8.615850e-47 |
Msa0381000 | Msa1035930 | 0.804439 | 2.158911e-49 | -8.615850e-47 |
Msa0411410 | Msa1035930 | 0.805949 | 1.042542e-49 | -8.615850e-47 |
Msa0417650 | Msa1035930 | 0.819968 | 8.788655e-53 | -8.615850e-47 |
Msa0417730 | Msa1035930 | 0.823331 | 1.466860e-53 | -8.615850e-47 |
Msa0423840 | Msa1035930 | 0.801282 | 9.692697e-49 | -8.615850e-47 |
Msa0437400 | Msa1035930 | 0.805448 | 1.328708e-49 | -8.615850e-47 |
Msa0442270 | Msa1035930 | 0.800428 | 1.447758e-48 | -8.615850e-47 |
Msa0981310 | Msa1035930 | 0.801970 | 7.003123e-49 | -8.615850e-47 |
Msa1010070 | Msa1035930 | 0.812148 | 4.903625e-51 | -8.615850e-47 |
Msa1021510 | Msa1035930 | 0.803883 | 2.817838e-49 | -8.615850e-47 |
Msa1035930 | Msa1036000 | 0.855093 | 7.951046e-62 | -8.615850e-47 |
Msa1035930 | Msa1036010 | 0.940356 | 2.682343e-100 | -8.615850e-47 |
Msa1035930 | Msa1036740 | 0.808966 | 2.388917e-50 | -8.615850e-47 |
Msa1035930 | Msa1056460 | 0.804467 | 2.130365e-49 | -8.615850e-47 |
Msa1035930 | Msa1098890 | 0.808844 | 2.536778e-50 | -8.615850e-47 |
Msa1035930 | Msa1113010 | 0.800933 | 1.142466e-48 | -8.615850e-47 |
Msa1035930 | Msa1174850 | 0.804758 | 1.852255e-49 | -8.615850e-47 |
Msa1035930 | Msa1211340 | 0.801777 | 7.671876e-49 | -8.615850e-47 |
Msa1035930 | Msa1259640 | 0.804143 | 2.488428e-49 | -8.615850e-47 |
Msa1035930 | Msa1280620 | 0.801448 | 8.962353e-49 | -8.615850e-47 |
Msa1035930 | Msa1296300 | 0.806922 | 6.500150e-50 | -8.615850e-47 |
Msa1035930 | Msa1306390 | 0.812606 | 3.895407e-51 | -8.615850e-47 |
Msa1035930 | Msa1307550 | 0.803144 | 4.009698e-49 | -8.615850e-47 |
Msa1035930 | Msa1329790 | 0.800345 | 1.505353e-48 | -8.615850e-47 |
Msa1035930 | Msa1338250 | 0.830485 | 2.860560e-55 | -8.615850e-47 |
Msa1035930 | Msa1340810 | 0.805561 | 1.257873e-49 | -8.615850e-47 |
Msa1035930 | Msa1340830 | 0.804099 | 2.541582e-49 | -8.615850e-47 |
Msa1035930 | Msa1363700 | 0.800591 | 1.341400e-48 | -8.615850e-47 |
Msa1035930 | Msa1366300 | 0.802168 | 6.376771e-49 | -8.615850e-47 |
Msa1035930 | Msa1420250 | 0.807448 | 5.029986e-50 | -8.615850e-47 |
Msa1035930 | Msa1433220 | 0.816845 | 4.482495e-52 | -8.615850e-47 |
Msa1035930 | Msa1435400 | 0.804706 | 1.898853e-49 | -8.615850e-47 |
Msa1035930 | Msa1467000 | 0.802721 | 4.905156e-49 | -8.615850e-47 |
Msa0269520 | Msa1035930 | 0.834330 | 3.189434e-56 | -8.615850e-47 |
Msa0288730 | Msa1035930 | 0.803041 | 4.211512e-49 | -8.615850e-47 |
Msa0342010 | Msa1035930 | 0.806301 | 8.791615e-50 | -8.615850e-47 |
Msa0363810 | Msa1035930 | 0.800189 | 1.619749e-48 | -8.615850e-47 |
Msa0527910 | Msa1035930 | 0.816576 | 5.148944e-52 | -8.615850e-47 |
Msa0537770 | Msa1035930 | 0.804092 | 2.550441e-49 | -8.615850e-47 |
Msa0573040 | Msa1035930 | 0.800499 | 1.400601e-48 | -8.615850e-47 |
Msa0576680 | Msa1035930 | 0.829498 | 4.978375e-55 | -8.615850e-47 |
Msa0578090 | Msa1035930 | 0.808134 | 3.594689e-50 | -8.615850e-47 |
Msa0579200 | Msa1035930 | 0.801638 | 8.191289e-49 | -8.615850e-47 |
Msa0861830 | Msa1035930 | 0.856481 | 3.124906e-62 | -8.615850e-47 |
Msa0909010 | Msa1035930 | 0.817334 | 3.480232e-52 | -8.615850e-47 |
Msa0965020 | Msa1035930 | 0.811798 | 5.845480e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1035930 | MtrunA17_Chr7g0260121 | 78.383 | 532 | 76 | 5 | 1 | 523 | 1 | 502 | 0.0 | 801 |
Msa1035930 | MtrunA17_Chr7g0260121 | 51.016 | 443 | 178 | 8 | 493 | 908 | 8 | 438 | 4.11e-119 | 374 |
Msa1035930 | MtrunA17_Chr6g0453821 | 62.474 | 485 | 164 | 6 | 1 | 474 | 1 | 478 | 0.0 | 587 |
Msa1035930 | MtrunA17_Chr6g0453821 | 49.887 | 443 | 171 | 9 | 489 | 896 | 2 | 428 | 6.98e-120 | 377 |
Msa1035930 | MtrunA17_Chr3g0079861 | 57.800 | 500 | 180 | 7 | 1 | 474 | 3 | 497 | 0.0 | 546 |
Msa1035930 | MtrunA17_Chr3g0079861 | 47.865 | 445 | 176 | 11 | 489 | 896 | 4 | 429 | 3.18e-104 | 336 |
Msa1035930 | MtrunA17_Chr7g0260261 | 56.513 | 499 | 187 | 6 | 1 | 474 | 3 | 496 | 3.86e-177 | 526 |
Msa1035930 | MtrunA17_Chr7g0260261 | 57.143 | 259 | 101 | 3 | 638 | 896 | 183 | 431 | 8.22e-83 | 279 |
Msa1035930 | MtrunA17_Chr7g0260261 | 66.667 | 57 | 16 | 1 | 489 | 542 | 4 | 60 | 3.16e-14 | 77.0 |
Msa1035930 | MtrunA17_Chr6g0453901 | 61.644 | 438 | 150 | 6 | 1 | 427 | 1 | 431 | 2.06e-176 | 520 |
Msa1035930 | MtrunA17_Chr6g0453901 | 49.887 | 443 | 171 | 9 | 489 | 896 | 2 | 428 | 1.44e-120 | 376 |
Msa1035930 | MtrunA17_Chr7g0256081 | 59.006 | 483 | 181 | 8 | 1 | 474 | 37 | 511 | 6.42e-174 | 519 |
Msa1035930 | MtrunA17_Chr7g0256081 | 46.847 | 444 | 190 | 12 | 484 | 896 | 33 | 461 | 1.39e-96 | 317 |
Msa1035930 | MtrunA17_Chr7g0254771 | 58.281 | 477 | 194 | 4 | 1 | 474 | 1 | 475 | 1.72e-173 | 516 |
Msa1035930 | MtrunA17_Chr7g0254771 | 46.028 | 428 | 191 | 7 | 497 | 896 | 10 | 425 | 2.39e-90 | 299 |
Msa1035930 | MtrunA17_Chr7g0254851 | 57.917 | 480 | 193 | 6 | 1 | 473 | 1 | 478 | 1.03e-168 | 504 |
Msa1035930 | MtrunA17_Chr7g0254851 | 44.213 | 432 | 197 | 10 | 497 | 896 | 10 | 429 | 1.98e-76 | 261 |
Msa1035930 | MtrunA17_Chr7g0258241 | 62.467 | 381 | 138 | 4 | 55 | 432 | 1 | 379 | 2.17e-151 | 451 |
Msa1035930 | MtrunA17_Chr7g0258241 | 57.401 | 277 | 108 | 2 | 620 | 896 | 105 | 371 | 1.12e-88 | 287 |
Msa1035930 | MtrunA17_Chr7g0254311 | 57.870 | 432 | 173 | 6 | 1 | 425 | 1 | 430 | 9.46e-150 | 449 |
Msa1035930 | MtrunA17_Chr7g0254311 | 43.908 | 435 | 200 | 10 | 497 | 899 | 10 | 432 | 2.15e-80 | 267 |
Msa1035930 | MtrunA17_Chr7g0266931 | 62.379 | 311 | 107 | 3 | 1 | 301 | 27 | 337 | 7.53e-120 | 368 |
Msa1035930 | MtrunA17_Chr7g0266931 | 43.881 | 335 | 125 | 8 | 482 | 772 | 22 | 337 | 1.82e-62 | 215 |
Msa1035930 | MtrunA17_Chr2g0293781 | 49.870 | 385 | 126 | 6 | 57 | 433 | 4 | 329 | 3.85e-108 | 337 |
Msa1035930 | MtrunA17_Chr2g0293781 | 59.896 | 192 | 66 | 4 | 706 | 896 | 139 | 320 | 5.17e-60 | 207 |
Msa1035930 | MtrunA17_Chr2g0293781 | 40.881 | 159 | 72 | 8 | 579 | 719 | 116 | 270 | 2.34e-13 | 72.4 |
Msa1035930 | MtrunA17_Chr7g0267251 | 63.902 | 205 | 72 | 2 | 272 | 474 | 1 | 205 | 6.42e-79 | 258 |
Msa1035930 | MtrunA17_Chr7g0267251 | 55.828 | 163 | 63 | 2 | 735 | 896 | 1 | 155 | 2.26e-45 | 165 |
Msa1035930 | MtrunA17_Chr2g0312391 | 47.018 | 285 | 134 | 3 | 8 | 278 | 16 | 297 | 6.69e-70 | 234 |
Msa1035930 | MtrunA17_Chr2g0312391 | 31.741 | 293 | 143 | 9 | 495 | 741 | 16 | 297 | 8.77e-19 | 88.6 |
Msa1035930 | MtrunA17_Chr7g0260111 | 63.889 | 180 | 58 | 4 | 2 | 176 | 3 | 180 | 6.77e-65 | 221 |
Msa1035930 | MtrunA17_Chr7g0260111 | 85.542 | 83 | 12 | 0 | 487 | 569 | 1 | 83 | 1.06e-38 | 147 |
Msa1035930 | MtrunA17_Chr6g0478831 | 59.884 | 172 | 68 | 1 | 1 | 171 | 1 | 172 | 6.92e-59 | 199 |
Msa1035930 | MtrunA17_Chr6g0478831 | 69.492 | 59 | 16 | 1 | 497 | 555 | 10 | 66 | 9.84e-18 | 82.0 |
Msa1035930 | MtrunA17_Chr7g0266941 | 57.432 | 148 | 61 | 2 | 329 | 474 | 2 | 149 | 1.03e-45 | 165 |
Msa1035930 | MtrunA17_Chr7g0266941 | 53.608 | 97 | 44 | 1 | 800 | 895 | 2 | 98 | 4.17e-23 | 100 |
Msa1035930 | MtrunA17_Chr7g0271091 | 61.458 | 96 | 32 | 1 | 1 | 96 | 1 | 91 | 1.41e-31 | 118 |
Msa1035930 | MtrunA17_Chr7g0271091 | 66.667 | 66 | 20 | 1 | 497 | 562 | 10 | 73 | 7.45e-22 | 90.9 |
Msa1035930 | MtrunA17_Chr7g0274761 | 35.965 | 228 | 125 | 5 | 9 | 215 | 6 | 233 | 6.64e-28 | 114 |
Msa1035930 | MtrunA17_Chr7g0273381 | 32.542 | 295 | 172 | 9 | 9 | 282 | 6 | 294 | 1.57e-27 | 117 |
Msa1035930 | MtrunA17_Chr7g0275031 | 29.801 | 302 | 175 | 10 | 9 | 278 | 6 | 302 | 1.16e-24 | 108 |
Msa1035930 | MtrunA17_Chr7g0267241 | 58.904 | 73 | 24 | 1 | 50 | 122 | 15 | 81 | 1.85e-21 | 89.4 |
Msa1035930 | MtrunA17_Chr2g0312381 | 40.000 | 115 | 68 | 1 | 378 | 492 | 2 | 115 | 4.68e-15 | 75.1 |
Msa1035930 | MtrunA17_Chr1g0154461 | 29.358 | 218 | 134 | 5 | 9 | 226 | 31 | 228 | 2.27e-13 | 73.6 |
Msa1035930 | MtrunA17_Chr1g0148651 | 29.333 | 225 | 138 | 7 | 9 | 233 | 329 | 532 | 5.86e-13 | 72.8 |
Msa1035930 | MtrunA17_Chr5g0442431 | 31.481 | 162 | 102 | 5 | 83 | 236 | 6 | 166 | 6.72e-13 | 67.8 |
Msa1035930 | MtrunA17_Chr2g0313091 | 28.000 | 275 | 173 | 8 | 1 | 256 | 12 | 280 | 1.24e-12 | 71.6 |
Msa1035930 | MtrunA17_Chr0c03g0490011 | 29.245 | 212 | 120 | 9 | 7 | 213 | 9 | 195 | 4.00e-12 | 69.3 |
Msa1035930 | MtrunA17_Chr5g0417271 | 26.506 | 249 | 158 | 7 | 11 | 253 | 12 | 241 | 1.33e-11 | 67.8 |
Msa1035930 | MtrunA17_Chr2g0303191 | 24.306 | 288 | 180 | 8 | 11 | 279 | 12 | 280 | 2.23e-11 | 67.0 |
Msa1035930 | MtrunA17_Chr1g0151571 | 27.536 | 276 | 179 | 9 | 9 | 279 | 18 | 277 | 4.69e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1035930 | AT1G13570.2 | 27.165 | 254 | 157 | 10 | 1 | 252 | 1 | 228 | 7.50e-11 | 64.7 |
Find 150 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTAACTGTGGGATTCAAAT+TGG | 0.178034 | 7_1:-72016650 | Msa1035930:CDS |
GTTAACTGCGGGGTTGAAAT+TGG | 0.183172 | 7_1:-72022653 | Msa1035930:CDS |
AAAACTTACATCTGAATAAT+TGG | 0.191119 | 7_1:+72023511 | None:intergenic |
ATCATAATCTCGACTACTTT+TGG | 0.207236 | 7_1:-72021901 | Msa1035930:CDS |
TTGAAACCAGATAAATTTAT+AGG | 0.212278 | 7_1:+72022836 | None:intergenic |
AAAAGGAGACAATCTTAATA+TGG | 0.245009 | 7_1:-72015589 | Msa1035930:CDS |
AGCGAAGCTCAAACATGTTT+TGG | 0.251710 | 7_1:+72017337 | None:intergenic |
AAAGTTAAGTTTGAAGGATT+TGG | 0.256483 | 7_1:-72023284 | Msa1035930:CDS |
GGCCAAGTTTATAAGGCTTT+TGG | 0.262417 | 7_1:-72016476 | Msa1035930:CDS |
CTTGTAGACTTCACCCTTGA+TGG | 0.263552 | 7_1:-72016731 | Msa1035930:CDS |
TATCATCCAACAATTCTTAA+AGG | 0.267997 | 7_1:+72022370 | None:intergenic |
AATTGAACTCACAATCATTA+AGG | 0.276353 | 7_1:+72022720 | None:intergenic |
CGAAGGTGGCCAAGTTTATA+AGG | 0.282650 | 7_1:-72016483 | Msa1035930:CDS |
AAAGTTAGGTTTGAAGGATT+TGG | 0.295847 | 7_1:-72017430 | Msa1035930:CDS |
CATGAATTGATCCAATCTTT+TGG | 0.303146 | 7_1:+72017252 | None:intergenic |
TATGATCCGACAGTTCTTAA+AGG | 0.309723 | 7_1:+72016340 | None:intergenic |
ATAGCACCTATAAATTTATC+TGG | 0.311525 | 7_1:-72022842 | Msa1035930:CDS |
ATCTGAATTTGCCAAAAGAT+TGG | 0.317357 | 7_1:-72017263 | Msa1035930:CDS |
ATGATGGCATGTCTCCTTAT+AGG | 0.324330 | 7_1:-72022289 | Msa1035930:CDS |
TTGAAGGAGTGGAAGGCTTT+TGG | 0.324818 | 7_1:+72017294 | None:intergenic |
TGTAAAGCAGGATTTGCTTC+AGG | 0.326741 | 7_1:-72022780 | Msa1035930:CDS |
AATTGAACTTGCAATCATAA+AGG | 0.332753 | 7_1:+72016858 | None:intergenic |
GTGAAGCAAGATATGCTTCA+TGG | 0.342823 | 7_1:-72016776 | Msa1035930:CDS |
GGCTTCACGAATGGAGATTA+AGG | 0.347239 | 7_1:-72017380 | Msa1035930:CDS |
TTAACTGCGGGGTTGAAATT+GGG | 0.351841 | 7_1:-72022652 | Msa1035930:CDS |
CTCTCATCCTTTGAATATAG+TGG | 0.356872 | 7_1:-72022245 | Msa1035930:CDS |
TTAACTGTGGGATTCAAATT+GGG | 0.357331 | 7_1:-72016649 | Msa1035930:CDS |
CCATTTGCCATTCATCCATA+TGG | 0.361871 | 7_1:-72022146 | Msa1035930:CDS |
ACAATCAGGCAACTCAATCT+TGG | 0.363317 | 7_1:+72017473 | None:intergenic |
TCAATGTTCATTCTGTGTAT+TGG | 0.366352 | 7_1:+72016557 | None:intergenic |
GACAAGATATATCTTTGTTA+TGG | 0.382020 | 7_1:-72016186 | Msa1035930:CDS |
TCACTATGTTGATTACCTAA+TGG | 0.396330 | 7_1:+72023037 | None:intergenic |
ATATGTTGTGATCTTGCAAT+TGG | 0.406501 | 7_1:+72016098 | None:intergenic |
TGGACTCCATGAATGTATTT+CGG | 0.410803 | 7_1:-72022444 | Msa1035930:CDS |
GCAATTGGACCAAAGGGAAA+TGG | 0.412473 | 7_1:+72016113 | None:intergenic |
TTACATCTGAATAATTGGTT+TGG | 0.415762 | 7_1:+72023516 | None:intergenic |
GCTGCAAATTGCTGCTCCAT+AGG | 0.425331 | 7_1:-72015546 | None:intergenic |
GCATCAATAGACATCCTATA+AGG | 0.425432 | 7_1:+72022275 | None:intergenic |
TCTGAATAATTGGTTTGGTT+TGG | 0.427249 | 7_1:+72023521 | None:intergenic |
ATTGAACTTGCAATCATAAA+GGG | 0.427289 | 7_1:+72016859 | None:intergenic |
CCATTCATGAAGCCATCGTT+TGG | 0.427804 | 7_1:+72023243 | None:intergenic |
AAAAGCCTTCCACTCCTTCA+AGG | 0.435469 | 7_1:-72017292 | Msa1035930:CDS |
AGAGAAATTAGCAGAGGTAT+TGG | 0.441283 | 7_1:-72021975 | Msa1035930:CDS |
ATTGAACTCACAATCATTAA+GGG | 0.446724 | 7_1:+72022721 | None:intergenic |
AAATTTAGAGCTATTTATTG+AGG | 0.448634 | 7_1:-72021933 | Msa1035930:CDS |
ATCGGAATTCGTCACAAGAA+TGG | 0.456875 | 7_1:-72023116 | Msa1035930:CDS |
CTCTCATCCTTTGAATATAG+TGG | 0.457170 | 7_1:-72016215 | Msa1035930:CDS |
GAATAATTGGTTTGGTTTGG+TGG | 0.457665 | 7_1:+72023524 | None:intergenic |
CAATCTTAATATGGGACGAT+TGG | 0.459636 | 7_1:-72015580 | Msa1035930:CDS |
ATCCAAAAGCCTTATAAACT+TGG | 0.460321 | 7_1:+72016474 | None:intergenic |
ATTCAGATTGAAACCCTTGA+AGG | 0.460693 | 7_1:+72017278 | None:intergenic |
ACGTCACCTTTAAGAATTGT+TGG | 0.460869 | 7_1:-72022376 | Msa1035930:CDS |
TGTTGTCCGAAATACATTCA+TGG | 0.461388 | 7_1:+72022438 | None:intergenic |
CCAAACGATGGCTTCATGAA+TGG | 0.461815 | 7_1:-72023243 | Msa1035930:CDS |
TAAAGGTAACGTTCTCAAGT+TGG | 0.464438 | 7_1:+72016357 | None:intergenic |
GTAAAGCAGGATTTGCTTCA+GGG | 0.464723 | 7_1:-72022779 | Msa1035930:CDS |
ATTTAAACATTGTTAACTGC+GGG | 0.464814 | 7_1:-72022664 | Msa1035930:CDS |
CAATCAGGCAACTCAATCTT+GGG | 0.467878 | 7_1:+72017474 | None:intergenic |
CTGCAAATTGCTGCTCCATA+GGG | 0.473761 | 7_1:-72015545 | None:intergenic |
TATGGCCCCAAGTTTATTGA+AGG | 0.474254 | 7_1:-72016168 | Msa1035930:CDS |
TCTACCTCTGTAGCTAAACT+TGG | 0.474315 | 7_1:+72022526 | None:intergenic |
ATATAAAGTAAGCTTCCATA+TGG | 0.474931 | 7_1:+72022131 | None:intergenic |
AAAGGAGACAATCTTAATAT+GGG | 0.475010 | 7_1:-72015588 | Msa1035930:CDS |
AATCTTAATATGGGACGATT+GGG | 0.478786 | 7_1:-72015579 | Msa1035930:CDS |
GTGACGACGATTATGTTTGA+TGG | 0.480760 | 7_1:-72016434 | Msa1035930:CDS |
TATTACAGTCAAACATGTTA+CGG | 0.483395 | 7_1:+72023191 | None:intergenic |
ATCCTTTGAATATAGTGGTC+AGG | 0.483396 | 7_1:-72016210 | Msa1035930:CDS |
AGAAGTCCATAGGTGCTACT+AGG | 0.490073 | 7_1:+72016984 | None:intergenic |
ACTACCTCTGTAGCTAAACT+TGG | 0.490385 | 7_1:+72016520 | None:intergenic |
ATGCTCAAATGACGTAGCTT+CGG | 0.491534 | 7_1:+72022326 | None:intergenic |
ATATTCGATATAACACAATC+TGG | 0.493160 | 7_1:+72023313 | None:intergenic |
GCATCTTGTTGTTGTAAAGC+AGG | 0.493856 | 7_1:-72022792 | Msa1035930:CDS |
GGCAAATGGAGTTTCTTCTC+TGG | 0.494873 | 7_1:+72022160 | None:intergenic |
GTAGCACCTATGGACTTCTC+TGG | 0.495732 | 7_1:-72016980 | Msa1035930:CDS |
AGTCTAAAGACAAATTTGTA+TGG | 0.496604 | 7_1:+72022917 | None:intergenic |
TAAGCTTCCATATGGATGAA+TGG | 0.498427 | 7_1:+72022139 | None:intergenic |
AATTTAGAGCTATTTATTGA+GGG | 0.499343 | 7_1:-72021932 | Msa1035930:CDS |
CCATATGGATGAATGGCAAA+TGG | 0.500728 | 7_1:+72022146 | None:intergenic |
AAAGCTGAATAACAACAGAT+TGG | 0.501184 | 7_1:+72016396 | None:intergenic |
TAACTGCGGGGTTGAAATTG+GGG | 0.506509 | 7_1:-72022651 | Msa1035930:CDS |
TTCTGAATGTCTCCAACTTG+AGG | 0.511702 | 7_1:-72022399 | Msa1035930:CDS |
ATAATCGATAAAATACAATC+AGG | 0.514529 | 7_1:+72017459 | None:intergenic |
TATGATTATGAGCACTTCAC+AGG | 0.515051 | 7_1:-72022096 | Msa1035930:intron |
GTGCTGCCTAGTAGCACCTA+TGG | 0.515710 | 7_1:-72016990 | Msa1035930:CDS |
ACAATTGAAAGAGTATTCAA+TGG | 0.517553 | 7_1:+72016586 | None:intergenic |
CCATTCGTGAAGCCACCGCT+TGG | 0.518737 | 7_1:+72017389 | None:intergenic |
ATAATTGATTGTGGCTATGA+TGG | 0.523820 | 7_1:-72022305 | Msa1035930:CDS |
TTATGCTGTGAGGATGTTCA+TGG | 0.526795 | 7_1:+72016255 | None:intergenic |
AGTTGAACATTGTTAACTGT+GGG | 0.532213 | 7_1:-72016661 | Msa1035930:CDS |
CATTTGAGCATAATTGATTG+TGG | 0.533127 | 7_1:-72022314 | Msa1035930:CDS |
AAAGCCTTCCACTCCTTCAA+GGG | 0.534144 | 7_1:-72017291 | Msa1035930:CDS |
GTGAAGCAGGATATGCTTCA+TGG | 0.537099 | 7_1:-72016917 | Msa1035930:CDS |
TTGTAAGTTCAACTCTGACT+TGG | 0.539140 | 7_1:-72016708 | Msa1035930:CDS |
TAAAGGTGACGTCCTCAAGT+TGG | 0.541407 | 7_1:+72022387 | None:intergenic |
TCAATTGAATATTCTTGCAA+TGG | 0.545122 | 7_1:-72022590 | Msa1035930:CDS |
TAACTGTGGGATTCAAATTG+GGG | 0.546856 | 7_1:-72016648 | Msa1035930:CDS |
TGTTCATTGAGTGTACTTCA+CGG | 0.547219 | 7_1:+72022567 | None:intergenic |
TGATCTTGCAATTGGACCAA+AGG | 0.548527 | 7_1:+72016106 | None:intergenic |
GTCTACAAGATGGATGCAGC+TGG | 0.548530 | 7_1:+72022748 | None:intergenic |
CCACCGCTTGGACAATGCAC+TGG | 0.548700 | 7_1:+72017401 | None:intergenic |
TGATGCTCCAAGGTTATCAA+AGG | 0.551628 | 7_1:-72022201 | Msa1035930:CDS |
GATCTTGCAATTGGACCAAA+GGG | 0.551853 | 7_1:+72016107 | None:intergenic |
CCAAGCGGTGGCTTCACGAA+TGG | 0.552264 | 7_1:-72017389 | Msa1035930:CDS |
CAATTGATGCTGAAATATCA+AGG | 0.552746 | 7_1:-72023091 | Msa1035930:CDS |
GTCTACAAGATGGATGCAGT+TGG | 0.552883 | 7_1:+72016745 | None:intergenic |
GTCTACAAGATGGATGCAGT+TGG | 0.552883 | 7_1:+72016886 | None:intergenic |
GATTGAAACCCTTGAAGGAG+TGG | 0.555439 | 7_1:+72017283 | None:intergenic |
CGTGTAACCACTATATTCAA+AGG | 0.556800 | 7_1:+72022238 | None:intergenic |
TATTCTCTGTTGATGCTCCA+AGG | 0.557349 | 7_1:-72022211 | Msa1035930:CDS |
GTGACAACAATTGTGTTCGA+TGG | 0.559994 | 7_1:-72022464 | Msa1035930:CDS |
ACGTTACCTTTAAGAACTGT+CGG | 0.560411 | 7_1:-72016346 | Msa1035930:CDS |
GCATCTAGTTGATGTGAAGC+AGG | 0.560901 | 7_1:-72016930 | Msa1035930:CDS |
CGCCTGACCACTATATTCAA+AGG | 0.561277 | 7_1:+72016208 | None:intergenic |
CAACAGATTGGAGACATTCA+CGG | 0.561419 | 7_1:+72016408 | None:intergenic |
CATGATCCGTTCACTTCGAG+TGG | 0.563184 | 7_1:-72023065 | Msa1035930:CDS |
GGGACGATTGGGAGTTGTTG+TGG | 0.564954 | 7_1:-72015568 | Msa1035930:CDS |
AGTTGAACTTACAACCATCA+AGG | 0.569358 | 7_1:+72016717 | None:intergenic |
GAAACCCTTGAAGGAGTGGA+AGG | 0.571160 | 7_1:+72017287 | None:intergenic |
TAAGGGTGAAGTCTACAAGA+TGG | 0.582003 | 7_1:+72022738 | None:intergenic |
TCACGAATGGAGATTAAGGA+TGG | 0.590728 | 7_1:-72017376 | Msa1035930:CDS |
CATTTAAACATTGTTAACTG+CGG | 0.590936 | 7_1:-72022665 | Msa1035930:CDS |
TTCAAACCAGAGAAGTCCAT+AGG | 0.592725 | 7_1:+72016974 | None:intergenic |
AAAGGGTCAAGTCTACAAGA+TGG | 0.593500 | 7_1:+72016876 | None:intergenic |
TGTTACGGAGATCAAAATTG+AGG | 0.594580 | 7_1:+72023206 | None:intergenic |
CAAGGGTGAAGTCTACAAGA+TGG | 0.595854 | 7_1:+72016735 | None:intergenic |
AAGTTGAACATTGTTAACTG+TGG | 0.596777 | 7_1:-72016662 | Msa1035930:CDS |
GAAAATCCACTCGAAGTGAA+CGG | 0.606801 | 7_1:+72023059 | None:intergenic |
TTATCCAAGTTTAGCTACAG+AGG | 0.607441 | 7_1:-72016524 | Msa1035930:CDS |
TTATCCAAGTTTAGCTACAG+AGG | 0.607441 | 7_1:-72022530 | Msa1035930:CDS |
AGACATTCAGAAAACAAATG+AGG | 0.612064 | 7_1:+72022410 | None:intergenic |
TGACGACGATTATGTTTGAT+GGG | 0.616531 | 7_1:-72016433 | Msa1035930:CDS |
CTAATTTCTAGCTACGAAGG+TGG | 0.626572 | 7_1:-72016497 | Msa1035930:CDS |
TAATTGCAGTAGCAATGAAG+AGG | 0.628871 | 7_1:-72017509 | Msa1035930:intron |
TTGCAGTAGCAATGAAGAGG+AGG | 0.634334 | 7_1:-72017506 | Msa1035930:intron |
AGTCTAATTTCTAGCTACGA+AGG | 0.634366 | 7_1:-72016500 | Msa1035930:CDS |
ACAGGTAGAGAAATTAGCAG+AGG | 0.648016 | 7_1:-72021981 | Msa1035930:intron |
CTGCGGGGTTGAAATTGGGG+AGG | 0.658323 | 7_1:-72022648 | Msa1035930:CDS |
CAAGTGTATTATCCAAACGA+TGG | 0.659474 | 7_1:-72023255 | Msa1035930:CDS |
GTTGAACTTACAACCATCAA+GGG | 0.663328 | 7_1:+72016718 | None:intergenic |
AAACCAGTGCATTGTCCAAG+CGG | 0.666940 | 7_1:-72017404 | Msa1035930:CDS |
TTGAATATAGTGGTTACACG+AGG | 0.667234 | 7_1:-72022235 | Msa1035930:CDS |
AACTGTGGGATTCAAATTGG+GGG | 0.671842 | 7_1:-72016647 | Msa1035930:CDS |
AATACACAGAATGAACATTG+AGG | 0.672085 | 7_1:-72016555 | Msa1035930:CDS |
CCAGTGCATTGTCCAAGCGG+TGG | 0.678908 | 7_1:-72017401 | Msa1035930:CDS |
AGTACACTCAATGAACATTG+AGG | 0.679605 | 7_1:-72022561 | Msa1035930:CDS |
ATGTTTAAATGAAACAACGT+CGG | 0.680399 | 7_1:+72022677 | None:intergenic |
TTTAAACATTGTTAACTGCG+GGG | 0.686466 | 7_1:-72022663 | Msa1035930:CDS |
TGAATATAGTGGTTACACGA+GGG | 0.696995 | 7_1:-72022234 | Msa1035930:CDS |
CTGAAATTGAGAGTTTGTGT+CGG | 0.697841 | 7_1:+72023555 | None:intergenic |
GCATCAATAGTTATGCTGTG+AGG | 0.778101 | 7_1:+72016245 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTACTTTTAGAAATAAAT+AGG | - | chr7_1:72018097-72018116 | Msa1035930:intron | 10.0% |
!!! | TTTTTAAAAAAAAAGGAAAT+AGG | - | chr7_1:72020295-72020314 | Msa1035930:intron | 10.0% |
!! | GTGATAATAAAAAAAAAAAT+TGG | + | chr7_1:72020475-72020494 | None:intergenic | 10.0% |
!! | AATATTTATTGTTTATATGT+AGG | - | chr7_1:72023133-72023152 | Msa1035930:CDS | 10.0% |
!!! | AATTGACTTAATTAAAATTG+AGG | + | chr7_1:72015697-72015716 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | + | chr7_1:72017855-72017874 | None:intergenic | 15.0% |
!! | AGATAAAAAGTAATAAAATC+TGG | + | chr7_1:72017632-72017651 | None:intergenic | 15.0% |
!! | AATGCTATTAAAATTAAGTA+AGG | - | chr7_1:72017855-72017874 | Msa1035930:intron | 15.0% |
!! | TATTAAGGAAAATAAATTTC+CGG | + | chr7_1:72018027-72018046 | None:intergenic | 15.0% |
!! | CTTTCAGTTAAATTATATTA+AGG | + | chr7_1:72018042-72018061 | None:intergenic | 15.0% |
!!! | AGAACTTGTTTATTATATTA+CGG | + | chr7_1:72018908-72018927 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTCATAAAAGGA+AGG | - | chr7_1:72020205-72020224 | Msa1035930:intron | 15.0% |
!! | AAATAGGCTTATATTAAAAA+TGG | - | chr7_1:72020311-72020330 | Msa1035930:intron | 15.0% |
!! | AATAGGCTTATATTAAAAAT+GGG | - | chr7_1:72020312-72020331 | Msa1035930:intron | 15.0% |
!! | TAATGAAAGGAAAAAATTAT+GGG | + | chr7_1:72020398-72020417 | None:intergenic | 15.0% |
!! | TTAATGAAAGGAAAAAATTA+TGG | + | chr7_1:72020399-72020418 | None:intergenic | 15.0% |
!!! | GTATATCTATACTTTTATTA+GGG | + | chr7_1:72020616-72020635 | None:intergenic | 15.0% |
!!! | AGTATATCTATACTTTTATT+AGG | + | chr7_1:72020617-72020636 | None:intergenic | 15.0% |
!! | ATGTTAGTATAAATAATGTT+GGG | + | chr7_1:72020643-72020662 | None:intergenic | 15.0% |
!! | AATGTTAGTATAAATAATGT+TGG | + | chr7_1:72020644-72020663 | None:intergenic | 15.0% |
!!! | GTATATCTATACTTTTATTA+GGG | + | chr7_1:72020616-72020635 | None:intergenic | 15.0% |
!!! | AGTATATCTATACTTTTATT+AGG | + | chr7_1:72020617-72020636 | None:intergenic | 15.0% |
!! | ATGTTAGTATAAATAATGTT+GGG | + | chr7_1:72020643-72020662 | None:intergenic | 15.0% |
!! | AATGTTAGTATAAATAATGT+TGG | + | chr7_1:72020644-72020663 | None:intergenic | 15.0% |
!! | TAAATATTAACAAGTAAACA+TGG | + | chr7_1:72023121-72023140 | None:intergenic | 15.0% |
!! | AAAACTTACATCTGAATAAT+TGG | + | chr7_1:72015635-72015654 | None:intergenic | 20.0% |
!!! | AGTTTTTAAAAGGTTTCAAT+CGG | - | chr7_1:72016009-72016028 | Msa1035930:intron | 20.0% |
!!! | ATTGACAAAATGATTTTCAA+AGG | - | chr7_1:72016133-72016152 | Msa1035930:CDS | 20.0% |
!! | TTGAAACCAGATAAATTTAT+AGG | + | chr7_1:72016310-72016329 | None:intergenic | 20.0% |
!!! | AGAGAATTTTCTAAACATAT+TGG | - | chr7_1:72016637-72016656 | Msa1035930:CDS | 20.0% |
!!! | GAGAATTTTCTAAACATATT+GGG | - | chr7_1:72016638-72016657 | Msa1035930:CDS | 20.0% |
!!! | TAAAGGTAATTGTTATTTGT+GGG | + | chr7_1:72017127-72017146 | None:intergenic | 20.0% |
!!! | ATAAAGGTAATTGTTATTTG+TGG | + | chr7_1:72017128-72017147 | None:intergenic | 20.0% |
!! | ACAATTACCTTTATTGTTAA+TGG | - | chr7_1:72017134-72017153 | Msa1035930:intron | 20.0% |
!!! | AAATTTAGAGCTATTTATTG+AGG | - | chr7_1:72017210-72017229 | Msa1035930:intron | 20.0% |
!!! | AATTTAGAGCTATTTATTGA+GGG | - | chr7_1:72017211-72017230 | Msa1035930:intron | 20.0% |
!!! | GGTTGTTCATTTTTTTTTTT+TGG | - | chr7_1:72017343-72017362 | Msa1035930:CDS | 20.0% |
!!! | GATTTGTTCACTTTATTTTA+GGG | - | chr7_1:72017367-72017386 | Msa1035930:CDS | 20.0% |
!! | AAACAAATTTGAATTGAGTA+GGG | + | chr7_1:72017503-72017522 | None:intergenic | 20.0% |
!! | TAAACAAATTTGAATTGAGT+AGG | + | chr7_1:72017504-72017523 | None:intergenic | 20.0% |
!! | AAATTAATTCTGATTTCAAC+CGG | - | chr7_1:72018005-72018024 | Msa1035930:intron | 20.0% |
!! | ATTACTTGACAAAAGAAAAT+TGG | - | chr7_1:72018375-72018394 | Msa1035930:intron | 20.0% |
!! | AAAACGTTTGAAAAAATTAG+TGG | - | chr7_1:72018650-72018669 | Msa1035930:intron | 20.0% |
!! | TTCTCTTGACAAAATTTATA+TGG | - | chr7_1:72019229-72019248 | Msa1035930:intron | 20.0% |
!! | TCTCTTGACAAAATTTATAT+GGG | - | chr7_1:72019230-72019249 | Msa1035930:intron | 20.0% |
!! | TAACATTGTATAGTTTACTT+TGG | - | chr7_1:72019404-72019423 | Msa1035930:intron | 20.0% |
!!! | TTCTACATTAAATAGTGTTT+TGG | + | chr7_1:72019551-72019570 | None:intergenic | 20.0% |
!!! | ATATATTTTTGTATTGCAGA+GGG | - | chr7_1:72020047-72020066 | Msa1035930:intron | 20.0% |
!!! | TAAATTTTGTTTTAGAAGCT+TGG | + | chr7_1:72020345-72020364 | None:intergenic | 20.0% |
!!! | GTATTTATAAGCTTTAATAG+AGG | + | chr7_1:72020585-72020604 | None:intergenic | 20.0% |
!! | TATTTATACTAACATTCAGA+TGG | - | chr7_1:72020648-72020667 | Msa1035930:intron | 20.0% |
!! | ATTTATACTAACATTCAGAT+GGG | - | chr7_1:72020649-72020668 | Msa1035930:intron | 20.0% |
!! | TATTTATACTAACATTCAGA+TGG | - | chr7_1:72020648-72020667 | Msa1035930:intron | 20.0% |
!! | ATTTATACTAACATTCAGAT+GGG | - | chr7_1:72020649-72020668 | Msa1035930:intron | 20.0% |
!! | TATTTATACTAGCGTTTAAA+TGG | - | chr7_1:72020776-72020795 | Msa1035930:intron | 20.0% |
!! | ATGGAAAACCTAAAAAATTA+GGG | + | chr7_1:72021173-72021192 | None:intergenic | 20.0% |
!! | ATAATCGATAAAATACAATC+AGG | + | chr7_1:72021687-72021706 | None:intergenic | 20.0% |
!!! | TCGATTATATTTTCAAAGTT+AGG | - | chr7_1:72021699-72021718 | Msa1035930:intron | 20.0% |
!! | AAAAAACCTTCAATAAACTT+GGG | + | chr7_1:72022984-72023003 | None:intergenic | 20.0% |
!! | TAAATATTTGAATTGAAGCA+AGG | + | chr7_1:72023205-72023224 | None:intergenic | 20.0% |
!! | TTAATACATTATATGATCCA+AGG | - | chr7_1:72023245-72023264 | Msa1035930:CDS | 20.0% |
!! | ATTTAAAAGAACCAAACAAT+AGG | + | chr7_1:72023485-72023504 | None:intergenic | 20.0% |
! | TTACATCTGAATAATTGGTT+TGG | + | chr7_1:72015630-72015649 | None:intergenic | 25.0% |
! | ATATTCGATATAACACAATC+TGG | + | chr7_1:72015833-72015852 | None:intergenic | 25.0% |
!! | CTTTTCAAAGTTAAGTTTGA+AGG | - | chr7_1:72015853-72015872 | Msa1035930:intron | 25.0% |
! | AAAGTTAAGTTTGAAGGATT+TGG | - | chr7_1:72015859-72015878 | Msa1035930:intron | 25.0% |
! | TATTACAGTCAAACATGTTA+CGG | + | chr7_1:72015955-72015974 | None:intergenic | 25.0% |
!!! | TTTTAAAAACTGAAACTGGA+AGG | + | chr7_1:72016000-72016019 | None:intergenic | 25.0% |
!! | TTCCAGTTTCAGTTTTTAAA+AGG | - | chr7_1:72015999-72016018 | Msa1035930:intron | 25.0% |
!!! | AACCTTTTAAAAACTGAAAC+TGG | + | chr7_1:72016004-72016023 | None:intergenic | 25.0% |
!! | ATTTTCAAAGGAATTGCTAA+GGG | - | chr7_1:72016145-72016164 | Msa1035930:CDS | 25.0% |
! | AGTCTAAAGACAAATTTGTA+TGG | + | chr7_1:72016229-72016248 | None:intergenic | 25.0% |
! | ATAGCACCTATAAATTTATC+TGG | - | chr7_1:72016301-72016320 | Msa1035930:CDS | 25.0% |
! | ATTGAACTCACAATCATTAA+GGG | + | chr7_1:72016425-72016444 | None:intergenic | 25.0% |
! | AATTGAACTCACAATCATTA+AGG | + | chr7_1:72016426-72016445 | None:intergenic | 25.0% |
! | ATGTTTAAATGAAACAACGT+CGG | + | chr7_1:72016469-72016488 | None:intergenic | 25.0% |
! | CATTTAAACATTGTTAACTG+CGG | - | chr7_1:72016478-72016497 | Msa1035930:CDS | 25.0% |
! | ATTTAAACATTGTTAACTGC+GGG | - | chr7_1:72016479-72016498 | Msa1035930:CDS | 25.0% |
! | TCAATTGAATATTCTTGCAA+TGG | - | chr7_1:72016553-72016572 | Msa1035930:CDS | 25.0% |
! | TATCATCCAACAATTCTTAA+AGG | + | chr7_1:72016776-72016795 | None:intergenic | 25.0% |
! | ATATAAAGTAAGCTTCCATA+TGG | + | chr7_1:72017015-72017034 | None:intergenic | 25.0% |
! | GTTTACACCATTAACAATAA+AGG | + | chr7_1:72017144-72017163 | None:intergenic | 25.0% |
! | TTATTGTTAATGGTGTAAAC+AGG | - | chr7_1:72017144-72017163 | Msa1035930:intron | 25.0% |
!! | TTGGATTTTAGATATTGCAA+TGG | - | chr7_1:72017261-72017280 | Msa1035930:CDS | 25.0% |
!!! | CGATTTGTTCACTTTATTTT+AGG | - | chr7_1:72017366-72017385 | Msa1035930:CDS | 25.0% |
! | AGTGCAGAAAAACAAAATTA+GGG | + | chr7_1:72017470-72017489 | None:intergenic | 25.0% |
!!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr7_1:72017792-72017811 | Msa1035930:intron | 25.0% |
!!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr7_1:72017793-72017812 | Msa1035930:intron | 25.0% |
! | AAGTAAGGACTAAATTTACA+AGG | - | chr7_1:72017870-72017889 | Msa1035930:intron | 25.0% |
!! | GTGAATTATAGTTTTCTAGA+CGG | - | chr7_1:72017960-72017979 | Msa1035930:intron | 25.0% |
! | CTGCTTACATGAAAAATTAT+AGG | + | chr7_1:72018287-72018306 | None:intergenic | 25.0% |
! | ATGAATAAATGAGGTTTATG+TGG | + | chr7_1:72018332-72018351 | None:intergenic | 25.0% |
! | TTCACACAAATGAATAAATG+AGG | + | chr7_1:72018341-72018360 | None:intergenic | 25.0% |
! | ATAATGCTTACACAAATAAC+AGG | + | chr7_1:72018850-72018869 | None:intergenic | 25.0% |
! | CATTAGTGTTATATGAATGA+TGG | - | chr7_1:72018959-72018978 | Msa1035930:intron | 25.0% |
! | TCAGATTGAAAATTCACATA+TGG | - | chr7_1:72019037-72019056 | Msa1035930:intron | 25.0% |
! | ATGGAAAATTCACATATGAT+TGG | - | chr7_1:72019056-72019075 | Msa1035930:intron | 25.0% |
! | TTGTATAGTTTACTTTGGTT+AGG | - | chr7_1:72019409-72019428 | Msa1035930:intron | 25.0% |
!!! | AAATTGATTTTTGACCGAAT+TGG | - | chr7_1:72019484-72019503 | Msa1035930:intron | 25.0% |
! | AGATTTATGTTGTAAAGAGT+GGG | + | chr7_1:72019811-72019830 | None:intergenic | 25.0% |
!!! | ATCTTGTTTTCTTTGCAAAA+AGG | - | chr7_1:72019897-72019916 | Msa1035930:intron | 25.0% |
! | TTTACATGAAGATGTCTATT+TGG | + | chr7_1:72019933-72019952 | None:intergenic | 25.0% |
! | AACTTAAGGGAATAATAAGA+TGG | + | chr7_1:72019980-72019999 | None:intergenic | 25.0% |
! | AAGTCTACTACTTAACTTAA+GGG | + | chr7_1:72019993-72020012 | None:intergenic | 25.0% |
!!! | GATATATTTTTGTATTGCAG+AGG | - | chr7_1:72020046-72020065 | Msa1035930:intron | 25.0% |
!!! | TATATTTTTGTATTGCAGAG+GGG | - | chr7_1:72020048-72020067 | Msa1035930:intron | 25.0% |
! | ACTTCTATGTTCTAATTAAG+CGG | + | chr7_1:72020237-72020256 | None:intergenic | 25.0% |
!!! | GCTTCTAAAACAAAATTTAG+AGG | - | chr7_1:72020346-72020365 | Msa1035930:intron | 25.0% |
! | TTGTAAACAAATTCCGTTAA+AGG | - | chr7_1:72021011-72021030 | Msa1035930:intron | 25.0% |
! | ATTTCCAATCATACCTTTAA+CGG | + | chr7_1:72021027-72021046 | None:intergenic | 25.0% |
!!! | GTACTAAACCCTAATTTTTT+AGG | - | chr7_1:72021162-72021181 | Msa1035930:intron | 25.0% |
! | GATGGAAAACCTAAAAAATT+AGG | + | chr7_1:72021174-72021193 | None:intergenic | 25.0% |
! | GGAAGCAATTATAGTTAAAT+GGG | + | chr7_1:72021336-72021355 | None:intergenic | 25.0% |
! | AGGAAGCAATTATAGTTAAA+TGG | + | chr7_1:72021337-72021356 | None:intergenic | 25.0% |
! | TTAATTATAATTGCTTCCTG+TGG | - | chr7_1:72021425-72021444 | Msa1035930:intron | 25.0% |
!! | ATTTTCAAAGTTAGGTTTGA+AGG | - | chr7_1:72021707-72021726 | Msa1035930:intron | 25.0% |
! | ATTAGGTGATGAATATAGAT+CGG | - | chr7_1:72021961-72021980 | Msa1035930:CDS | 25.0% |
!! | CAATAGAAGTTCAATACTTT+TGG | + | chr7_1:72022026-72022045 | None:intergenic | 25.0% |
! | ATTGAACTTGCAATCATAAA+GGG | + | chr7_1:72022287-72022306 | None:intergenic | 25.0% |
! | AATTGAACTTGCAATCATAA+AGG | + | chr7_1:72022288-72022307 | None:intergenic | 25.0% |
!!! | ACAATTGAAAGAGTATTCAA+TGG | + | chr7_1:72022560-72022579 | None:intergenic | 25.0% |
!! | ATTTTCAAATGACACAGTTT+TGG | + | chr7_1:72022850-72022869 | None:intergenic | 25.0% |
! | GACAAGATATATCTTTGTTA+TGG | - | chr7_1:72022957-72022976 | Msa1035930:CDS | 25.0% |
! | AAAAACCTTCAATAAACTTG+GGG | + | chr7_1:72022983-72023002 | None:intergenic | 25.0% |
! | CAAAAAACCTTCAATAAACT+TGG | + | chr7_1:72022985-72023004 | None:intergenic | 25.0% |
!!! | CAAGTTTATTGAAGGTTTTT+TGG | - | chr7_1:72022983-72023002 | Msa1035930:CDS | 25.0% |
!! | TAACAAGTAAACATGGTTTT+TGG | + | chr7_1:72023114-72023133 | None:intergenic | 25.0% |
! | TTATCTTTGATGTTGGTATT+AGG | + | chr7_1:72023346-72023365 | None:intergenic | 25.0% |
! | AAATGTGTTATCTTTGATGT+TGG | + | chr7_1:72023353-72023372 | None:intergenic | 25.0% |
!!! | AAAAGCTTTTTCCTATTGTT+TGG | - | chr7_1:72023471-72023490 | Msa1035930:intron | 25.0% |
! | AAAAGGAGACAATCTTAATA+TGG | - | chr7_1:72023554-72023573 | Msa1035930:five_prime_UTR | 25.0% |
! | AAAGGAGACAATCTTAATAT+GGG | - | chr7_1:72023555-72023574 | Msa1035930:five_prime_UTR | 25.0% |
!! | TCTGAATAATTGGTTTGGTT+TGG | + | chr7_1:72015625-72015644 | None:intergenic | 30.0% |
CATGTTGTTAATTCGAATTC+TGG | - | chr7_1:72015719-72015738 | Msa1035930:intron | 30.0% | |
CAATTGATGCTGAAATATCA+AGG | - | chr7_1:72016052-72016071 | Msa1035930:intron | 30.0% | |
! | TCACTATGTTGATTACCTAA+TGG | + | chr7_1:72016109-72016128 | None:intergenic | 30.0% |
! | GATTTTCAAAGGAATTGCTA+AGG | - | chr7_1:72016144-72016163 | Msa1035930:CDS | 30.0% |
TTTAAACATTGTTAACTGCG+GGG | - | chr7_1:72016480-72016499 | Msa1035930:CDS | 30.0% | |
! | TCTAAACATATTGGGTTTTC+TGG | - | chr7_1:72016646-72016665 | Msa1035930:CDS | 30.0% |
AGACATTCAGAAAACAAATG+AGG | + | chr7_1:72016736-72016755 | None:intergenic | 30.0% | |
CATTTGAGCATAATTGATTG+TGG | - | chr7_1:72016829-72016848 | Msa1035930:CDS | 30.0% | |
ATAATTGATTGTGGCTATGA+TGG | - | chr7_1:72016838-72016857 | Msa1035930:CDS | 30.0% | |
! | CAAAAAACCTTTGATAACCT+TGG | + | chr7_1:72016952-72016971 | None:intergenic | 30.0% |
!!! | CAAGGTTATCAAAGGTTTTT+TGG | - | chr7_1:72016950-72016969 | Msa1035930:CDS | 30.0% |
! | ATCATAATCTCGACTACTTT+TGG | - | chr7_1:72017242-72017261 | Msa1035930:CDS | 30.0% |
CATTTAACTCCATTTGTCAT+AGG | - | chr7_1:72017322-72017341 | Msa1035930:CDS | 30.0% | |
AATGAACAACCTATGACAAA+TGG | + | chr7_1:72017334-72017353 | None:intergenic | 30.0% | |
CAGTGCAGAAAAACAAAATT+AGG | + | chr7_1:72017471-72017490 | None:intergenic | 30.0% | |
! | TTTTGCGATAATTTTTGCGA+AGG | + | chr7_1:72017595-72017614 | None:intergenic | 30.0% |
CAAGATTAGAACACTATGAA+AGG | + | chr7_1:72017729-72017748 | None:intergenic | 30.0% | |
!! | TTACAAGGTCGCTATTTTAT+AGG | - | chr7_1:72017885-72017904 | Msa1035930:intron | 30.0% |
!! | TACAAGGTCGCTATTTTATA+GGG | - | chr7_1:72017886-72017905 | Msa1035930:intron | 30.0% |
!!! | GCGTTTTGAAAAATGAATGA+AGG | + | chr7_1:72018171-72018190 | None:intergenic | 30.0% |
GGAACCTAATTTAACTCAAT+TGG | - | chr7_1:72018396-72018415 | Msa1035930:intron | 30.0% | |
CTTATAGAAGTTAAGCTAGT+GGG | - | chr7_1:72018615-72018634 | Msa1035930:intron | 30.0% | |
TATTACGGTTATATTTGTCG+AGG | + | chr7_1:72018893-72018912 | None:intergenic | 30.0% | |
TTGAAATATGTAGAGTTGCA+TGG | - | chr7_1:72019125-72019144 | Msa1035930:intron | 30.0% | |
! | TTGTCAGCTAACAATTTTGT+AGG | - | chr7_1:72019346-72019365 | Msa1035930:intron | 30.0% |
ATAGTTTACTTTGGTTAGGA+AGG | - | chr7_1:72019413-72019432 | Msa1035930:intron | 30.0% | |
CATCCAAACATAAACCAATT+CGG | + | chr7_1:72019501-72019520 | None:intergenic | 30.0% | |
!! | GCTTCAAAGATAACTGATTT+TGG | - | chr7_1:72019590-72019609 | Msa1035930:intron | 30.0% |
!! | TCAAAGATAACTGATTTTGG+AGG | - | chr7_1:72019593-72019612 | Msa1035930:intron | 30.0% |
!! | GAAGATAACTGATTTTGAAG+AGG | - | chr7_1:72019615-72019634 | Msa1035930:intron | 30.0% |
! | TTCTGGAAACAAAACCATTT+CGG | + | chr7_1:72019775-72019794 | None:intergenic | 30.0% |
GATTTATGTTGTAAAGAGTG+GGG | + | chr7_1:72019810-72019829 | None:intergenic | 30.0% | |
GAGATTTATGTTGTAAAGAG+TGG | + | chr7_1:72019812-72019831 | None:intergenic | 30.0% | |
TCGTAAAGTCTTCATGATAT+AGG | + | chr7_1:72019841-72019860 | None:intergenic | 30.0% | |
! | TTTTCTTTGCAAAAAGGCTT+TGG | - | chr7_1:72019903-72019922 | Msa1035930:intron | 30.0% |
TTTCTTTGCAAAAAGGCTTT+GGG | - | chr7_1:72019904-72019923 | Msa1035930:intron | 30.0% | |
!! | GGGAATAATAAGATGGATTA+AGG | + | chr7_1:72019973-72019992 | None:intergenic | 30.0% |
CAAGTCTACTACTTAACTTA+AGG | + | chr7_1:72019994-72020013 | None:intergenic | 30.0% | |
TTCGCACAAATCTTAATGAA+AGG | + | chr7_1:72020411-72020430 | None:intergenic | 30.0% | |
! | AATTCCGTTAAAGGTATGAT+TGG | - | chr7_1:72021020-72021039 | Msa1035930:intron | 30.0% |
! | ACCAAGTAATTTTCTTTTGC+AGG | - | chr7_1:72021274-72021293 | Msa1035930:intron | 30.0% |
ACCTGCAAAAGAAAATTACT+TGG | + | chr7_1:72021278-72021297 | None:intergenic | 30.0% | |
TTAACTATAATTGCTTCCTG+TGG | - | chr7_1:72021338-72021357 | Msa1035930:intron | 30.0% | |
ATGATGATAAGATACACTAC+AGG | + | chr7_1:72021531-72021550 | None:intergenic | 30.0% | |
AAAGTTAGGTTTGAAGGATT+TGG | - | chr7_1:72021713-72021732 | Msa1035930:intron | 30.0% | |
!!! | TGTTTTGGAGATCAAAGTTT+AGG | + | chr7_1:72021794-72021813 | None:intergenic | 30.0% |
ATCTGAATTTGCCAAAAGAT+TGG | - | chr7_1:72021880-72021899 | Msa1035930:CDS | 30.0% | |
! | CATGAATTGATCCAATCTTT+TGG | + | chr7_1:72021894-72021913 | None:intergenic | 30.0% |
! | ATCCGAGTAAATTTTCCATT+AGG | - | chr7_1:72021944-72021963 | Msa1035930:CDS | 30.0% |
CACCTAATGGAAAATTTACT+CGG | + | chr7_1:72021949-72021968 | None:intergenic | 30.0% | |
GATCTATATTCATCACCTAA+TGG | + | chr7_1:72021962-72021981 | None:intergenic | 30.0% | |
TGTCATATGAAACAAACGAT+AGG | - | chr7_1:72022044-72022063 | Msa1035930:intron | 30.0% | |
GTCATATGAAACAAACGATA+GGG | - | chr7_1:72022045-72022064 | Msa1035930:intron | 30.0% | |
AGAGTCATGGAAAATTTGTA+TGG | + | chr7_1:72022091-72022110 | None:intergenic | 30.0% | |
!!! | TTGCAAGTTCAATTTTGACT+TGG | - | chr7_1:72022294-72022313 | Msa1035930:CDS | 30.0% |
!!! | AATTTTGACTTGGAACTTTC+TGG | - | chr7_1:72022304-72022323 | Msa1035930:CDS | 30.0% |
AAGTTGAACATTGTTAACTG+TGG | - | chr7_1:72022481-72022500 | Msa1035930:CDS | 30.0% | |
AGTTGAACATTGTTAACTGT+GGG | - | chr7_1:72022482-72022501 | Msa1035930:CDS | 30.0% | |
TTAACTGTGGGATTCAAATT+GGG | - | chr7_1:72022494-72022513 | Msa1035930:CDS | 30.0% | |
TCAATGTTCATTCTGTGTAT+TGG | + | chr7_1:72022589-72022608 | None:intergenic | 30.0% | |
AATACACAGAATGAACATTG+AGG | - | chr7_1:72022588-72022607 | Msa1035930:CDS | 30.0% | |
! | ATCCAAAAGCCTTATAAACT+TGG | + | chr7_1:72022672-72022691 | None:intergenic | 30.0% |
! | TATAAGGCTTTTGGATTTTC+TGG | - | chr7_1:72022676-72022695 | Msa1035930:CDS | 30.0% |
AAAGCTGAATAACAACAGAT+TGG | + | chr7_1:72022750-72022769 | None:intergenic | 30.0% | |
ATATGTTGTGATCTTGCAAT+TGG | + | chr7_1:72023048-72023067 | None:intergenic | 30.0% | |
GTTTAATGGAAAAACTTCCT+TGG | + | chr7_1:72023265-72023284 | None:intergenic | 30.0% | |
ATAACGGTATTGTCTGAATT+GGG | + | chr7_1:72023297-72023316 | None:intergenic | 30.0% | |
AATAACGGTATTGTCTGAAT+TGG | + | chr7_1:72023298-72023317 | None:intergenic | 30.0% | |
TTCAGACAATACCGTTATTA+TGG | - | chr7_1:72023299-72023318 | Msa1035930:CDS | 30.0% | |
AATCTTAATATGGGACGATT+GGG | - | chr7_1:72023564-72023583 | Msa1035930:five_prime_UTR | 30.0% | |
CTGAAATTGAGAGTTTGTGT+CGG | + | chr7_1:72015591-72015610 | None:intergenic | 35.0% | |
!! | GAATAATTGGTTTGGTTTGG+TGG | + | chr7_1:72015622-72015641 | None:intergenic | 35.0% |
CAAGTGTATTATCCAAACGA+TGG | - | chr7_1:72015888-72015907 | Msa1035930:intron | 35.0% | |
TGTTACGGAGATCAAAATTG+AGG | + | chr7_1:72015940-72015959 | None:intergenic | 35.0% | |
TGTTCATTGAGTGTACTTCA+CGG | + | chr7_1:72016579-72016598 | None:intergenic | 35.0% | |
AGTACACTCAATGAACATTG+AGG | - | chr7_1:72016582-72016601 | Msa1035930:CDS | 35.0% | |
TTATCCAAGTTTAGCTACAG+AGG | - | chr7_1:72016613-72016632 | Msa1035930:CDS | 35.0% | |
TGGACTCCATGAATGTATTT+CGG | - | chr7_1:72016699-72016718 | Msa1035930:CDS | 35.0% | |
TGTTGTCCGAAATACATTCA+TGG | + | chr7_1:72016708-72016727 | None:intergenic | 35.0% | |
! | ACGTCACCTTTAAGAATTGT+TGG | - | chr7_1:72016767-72016786 | Msa1035930:CDS | 35.0% |
GCATCAATAGACATCCTATA+AGG | + | chr7_1:72016871-72016890 | None:intergenic | 35.0% | |
CTCTCATCCTTTGAATATAG+TGG | - | chr7_1:72016898-72016917 | Msa1035930:CDS | 35.0% | |
CGTGTAACCACTATATTCAA+AGG | + | chr7_1:72016908-72016927 | None:intergenic | 35.0% | |
TTGAATATAGTGGTTACACG+AGG | - | chr7_1:72016908-72016927 | Msa1035930:CDS | 35.0% | |
TGAATATAGTGGTTACACGA+GGG | - | chr7_1:72016909-72016928 | Msa1035930:CDS | 35.0% | |
TAAGCTTCCATATGGATGAA+TGG | + | chr7_1:72017007-72017026 | None:intergenic | 35.0% | |
TATGATTATGAGCACTTCAC+AGG | - | chr7_1:72017047-72017066 | Msa1035930:intron | 35.0% | |
! | AGAGAAATTAGCAGAGGTAT+TGG | - | chr7_1:72017168-72017187 | Msa1035930:intron | 35.0% |
TCTCGAAAAACTTTCTGTGA+CGG | - | chr7_1:72017294-72017313 | Msa1035930:CDS | 35.0% | |
!! | CACAAGGTCGCTATTTTATA+GGG | + | chr7_1:72017410-72017429 | None:intergenic | 35.0% |
!! | TCACAAGGTCGCTATTTTAT+AGG | + | chr7_1:72017411-72017430 | None:intergenic | 35.0% |
AAGTAAGGACTAAACTCACA+AGG | + | chr7_1:72017426-72017445 | None:intergenic | 35.0% | |
!! | TTCATGTAAGCAGTTGATAG+AGG | - | chr7_1:72018294-72018313 | Msa1035930:intron | 35.0% |
CTCGCCAATTGAGTTAAATT+AGG | + | chr7_1:72018403-72018422 | None:intergenic | 35.0% | |
TAAATGTTGTGACCACGTTA+GGG | + | chr7_1:72018457-72018476 | None:intergenic | 35.0% | |
AAAGTAGCTAGTTCGTTATG+AGG | + | chr7_1:72018591-72018610 | None:intergenic | 35.0% | |
GCTTATAGAAGTTAAGCTAG+TGG | - | chr7_1:72018614-72018633 | Msa1035930:intron | 35.0% | |
ATAACAATTCTTCTCTCACG+AGG | + | chr7_1:72018807-72018826 | None:intergenic | 35.0% | |
AGGAAAAGAAGAGAATATGC+AGG | - | chr7_1:72019086-72019105 | Msa1035930:intron | 35.0% | |
GACAAAATTTATATGGGTGC+TGG | - | chr7_1:72019236-72019255 | Msa1035930:intron | 35.0% | |
AAACGCTAAACAACAGACAT+TGG | + | chr7_1:72019279-72019298 | None:intergenic | 35.0% | |
! | TGACCGAATTGGTTTATGTT+TGG | - | chr7_1:72019495-72019514 | Msa1035930:intron | 35.0% |
!!! | GGTTTTGTTTCCAGAACTTT+AGG | - | chr7_1:72019779-72019798 | Msa1035930:intron | 35.0% |
AAACAAGATTCACGAAAGTG+AGG | + | chr7_1:72019886-72019905 | None:intergenic | 35.0% | |
ACACTCTTCGCTACAAAAAA+AGG | + | chr7_1:72020079-72020098 | None:intergenic | 35.0% | |
!!! | TTTTTTGTAGCGAAGAGTGT+AGG | - | chr7_1:72020079-72020098 | Msa1035930:intron | 35.0% |
AGATTTGTGCGAATGATGAT+TGG | - | chr7_1:72020418-72020437 | Msa1035930:intron | 35.0% | |
TCATAGAAAGAGGATGGTTA+TGG | + | chr7_1:72020521-72020540 | None:intergenic | 35.0% | |
GTGTATTCATAGAAAGAGGA+TGG | + | chr7_1:72020527-72020546 | None:intergenic | 35.0% | |
TGCTATATTGCTGATGTGAT+TGG | + | chr7_1:72020940-72020959 | None:intergenic | 35.0% | |
!! | TTTAGGTTTTCCATCCAAGT+CGG | - | chr7_1:72021179-72021198 | Msa1035930:intron | 35.0% |
!! | TGAGATGCTTGTTGTGTTAA+GGG | + | chr7_1:72021207-72021226 | None:intergenic | 35.0% |
!! | TTGAGATGCTTGTTGTGTTA+AGG | + | chr7_1:72021208-72021227 | None:intergenic | 35.0% |
! | TTTCTTTTGCAGGTTCTACT+TGG | - | chr7_1:72021284-72021303 | Msa1035930:intron | 35.0% |
ATGATGATAAGATACACCAC+AGG | + | chr7_1:72021357-72021376 | None:intergenic | 35.0% | |
TAATTGCAGTAGCAATGAAG+AGG | - | chr7_1:72021634-72021653 | Msa1035930:intron | 35.0% | |
ATTCAGATTGAAACCCTTGA+AGG | + | chr7_1:72021868-72021887 | None:intergenic | 35.0% | |
! | CAATTCATGCTGCATTTTCA+AGG | - | chr7_1:72021905-72021924 | Msa1035930:CDS | 35.0% |
GATGAATATAGATCGGTCAT+TGG | - | chr7_1:72021968-72021987 | Msa1035930:CDS | 35.0% | |
! | ATTGGTAGATTGATTTCCCA+AGG | - | chr7_1:72021986-72022005 | Msa1035930:intron | 35.0% |
! | AAACGATAGGGATTTTGTTG+TGG | - | chr7_1:72022057-72022076 | Msa1035930:intron | 35.0% |
GTTGAACTTACAACCATCAA+GGG | + | chr7_1:72022428-72022447 | None:intergenic | 35.0% | |
AGTTGAACTTACAACCATCA+AGG | + | chr7_1:72022429-72022448 | None:intergenic | 35.0% | |
TTGTAAGTTCAACTCTGACT+TGG | - | chr7_1:72022435-72022454 | Msa1035930:CDS | 35.0% | |
GTTAACTGTGGGATTCAAAT+TGG | - | chr7_1:72022493-72022512 | Msa1035930:CDS | 35.0% | |
TAACTGTGGGATTCAAATTG+GGG | - | chr7_1:72022495-72022514 | Msa1035930:CDS | 35.0% | |
TTATCCAAGTTTAGCTACAG+AGG | - | chr7_1:72016613-72016632 | Msa1035930:CDS | 35.0% | |
!! | AGTCTAATTTCTAGCTACGA+AGG | - | chr7_1:72022643-72022662 | Msa1035930:CDS | 35.0% |
TGACGACGATTATGTTTGAT+GGG | - | chr7_1:72022710-72022729 | Msa1035930:CDS | 35.0% | |
TAAAGGTAACGTTCTCAAGT+TGG | + | chr7_1:72022789-72022808 | None:intergenic | 35.0% | |
! | ACGTTACCTTTAAGAACTGT+CGG | - | chr7_1:72022797-72022816 | Msa1035930:CDS | 35.0% |
TATGATCCGACAGTTCTTAA+AGG | + | chr7_1:72022806-72022825 | None:intergenic | 35.0% | |
CTCTCATCCTTTGAATATAG+TGG | - | chr7_1:72016898-72016917 | Msa1035930:CDS | 35.0% | |
ATCCTTTGAATATAGTGGTC+AGG | - | chr7_1:72022933-72022952 | Msa1035930:CDS | 35.0% | |
GAGAAAAATCCATTTCCCTT+TGG | - | chr7_1:72023021-72023040 | Msa1035930:CDS | 35.0% | |
GGTTGATCCCAAAATTGAAA+TGG | - | chr7_1:72023171-72023190 | Msa1035930:CDS | 35.0% | |
TGATCCCAAAATTGAAATGG+TGG | - | chr7_1:72023174-72023193 | Msa1035930:CDS | 35.0% | |
!! | TTGGGAGTTGATTGGTTTAA+TGG | + | chr7_1:72023279-72023298 | None:intergenic | 35.0% |
! | ATACCGTTATTATGGTTTGC+TGG | - | chr7_1:72023307-72023326 | Msa1035930:CDS | 35.0% |
GAACCAGCAAACCATAATAA+CGG | + | chr7_1:72023313-72023332 | None:intergenic | 35.0% | |
AACTCAACTTCTTGAGTGAT+TGG | + | chr7_1:72023439-72023458 | None:intergenic | 35.0% | |
CAATCTTAATATGGGACGAT+TGG | - | chr7_1:72023563-72023582 | Msa1035930:five_prime_UTR | 35.0% | |
! | ACTGAAACTGGAAGGTTTTG+TGG | + | chr7_1:72015992-72016011 | None:intergenic | 40.0% |
ATCGGAATTCGTCACAAGAA+TGG | - | chr7_1:72016027-72016046 | Msa1035930:intron | 40.0% | |
GAAAATCCACTCGAAGTGAA+CGG | + | chr7_1:72016087-72016106 | None:intergenic | 40.0% | |
!! | CTTCGAGTGGATTTTCCATT+AGG | - | chr7_1:72016091-72016110 | Msa1035930:CDS | 40.0% |
!! | GCATCTTGTTGTTGTAAAGC+AGG | - | chr7_1:72016351-72016370 | Msa1035930:CDS | 40.0% |
! | TGTAAAGCAGGATTTGCTTC+AGG | - | chr7_1:72016363-72016382 | Msa1035930:CDS | 40.0% |
! | GTAAAGCAGGATTTGCTTCA+GGG | - | chr7_1:72016364-72016383 | Msa1035930:CDS | 40.0% |
TAAGGGTGAAGTCTACAAGA+TGG | + | chr7_1:72016408-72016427 | None:intergenic | 40.0% | |
TTAACTGCGGGGTTGAAATT+GGG | - | chr7_1:72016491-72016510 | Msa1035930:CDS | 40.0% | |
TCTACCTCTGTAGCTAAACT+TGG | + | chr7_1:72016620-72016639 | None:intergenic | 40.0% | |
GTGACAACAATTGTGTTCGA+TGG | - | chr7_1:72016679-72016698 | Msa1035930:CDS | 40.0% | |
TTCTGAATGTCTCCAACTTG+AGG | - | chr7_1:72016744-72016763 | Msa1035930:CDS | 40.0% | |
ATGCTCAAATGACGTAGCTT+CGG | + | chr7_1:72016820-72016839 | None:intergenic | 40.0% | |
ATGATGGCATGTCTCCTTAT+AGG | - | chr7_1:72016854-72016873 | Msa1035930:CDS | 40.0% | |
TATTCTCTGTTGATGCTCCA+AGG | - | chr7_1:72016932-72016951 | Msa1035930:CDS | 40.0% | |
TGATGCTCCAAGGTTATCAA+AGG | - | chr7_1:72016942-72016961 | Msa1035930:CDS | 40.0% | |
CCATATGGATGAATGGCAAA+TGG | + | chr7_1:72017000-72017019 | None:intergenic | 40.0% | |
CCATTTGCCATTCATCCATA+TGG | - | chr7_1:72016997-72017016 | Msa1035930:intron | 40.0% | |
ACAGGTAGAGAAATTAGCAG+AGG | - | chr7_1:72017162-72017181 | Msa1035930:intron | 40.0% | |
!! | TAAGCAGTTGATAGAGGTCA+AGG | - | chr7_1:72018300-72018319 | Msa1035930:intron | 40.0% |
GTGATATTACAACCCTAACG+TGG | - | chr7_1:72018442-72018461 | Msa1035930:intron | 40.0% | |
GTAAATGTTGTGACCACGTT+AGG | + | chr7_1:72018458-72018477 | None:intergenic | 40.0% | |
CACATATGATTGGACTTCAG+AGG | - | chr7_1:72019066-72019085 | Msa1035930:intron | 40.0% | |
! | AGTTAGCTAGTCACTTGTTG+AGG | - | chr7_1:72019174-72019193 | Msa1035930:intron | 40.0% |
!! | TTTATATGGGTGCTGGAAGA+TGG | - | chr7_1:72019243-72019262 | Msa1035930:intron | 40.0% |
TGGATGCAATAATGCGTAAG+TGG | - | chr7_1:72019515-72019534 | Msa1035930:intron | 40.0% | |
AAGAGGAGAACCAAACATGT+TGG | - | chr7_1:72019632-72019651 | Msa1035930:intron | 40.0% | |
!! | GGTAGAGCTCGTTTTAACAA+TGG | - | chr7_1:72019653-72019672 | Msa1035930:intron | 40.0% |
!! | AGAGCTCGTTTTAACAATGG+AGG | - | chr7_1:72019656-72019675 | Msa1035930:intron | 40.0% |
GGAAACAAAACCATTTCGGA+GGG | + | chr7_1:72019771-72019790 | None:intergenic | 40.0% | |
TGGAAACAAAACCATTTCGG+AGG | + | chr7_1:72019772-72019791 | None:intergenic | 40.0% | |
TGGAGAGAAGATAGAGGATA+AGG | + | chr7_1:72020501-72020520 | None:intergenic | 40.0% | |
TGGTTATGGAGAGAAGATAG+AGG | + | chr7_1:72020507-72020526 | None:intergenic | 40.0% | |
!! | CACTATACAAAAGCATCCTC+AGG | - | chr7_1:72020553-72020572 | Msa1035930:intron | 40.0% |
!!! | ACAAAAGCATCCTCAGGTTT+TGG | - | chr7_1:72020559-72020578 | Msa1035930:intron | 40.0% |
TTAATAGAGGCCAAAACCTG+AGG | + | chr7_1:72020572-72020591 | None:intergenic | 40.0% | |
!! | GAGATGCTTGTTGTGTTAAG+GGG | + | chr7_1:72021206-72021225 | None:intergenic | 40.0% |
ATGACGATAAGATACACCAC+AGG | + | chr7_1:72021444-72021463 | None:intergenic | 40.0% | |
CAATCAGGCAACTCAATCTT+GGG | + | chr7_1:72021672-72021691 | None:intergenic | 40.0% | |
ACAATCAGGCAACTCAATCT+TGG | + | chr7_1:72021673-72021692 | None:intergenic | 40.0% | |
TCACGAATGGAGATTAAGGA+TGG | - | chr7_1:72021767-72021786 | Msa1035930:intron | 40.0% | |
! | AGCGAAGCTCAAACATGTTT+TGG | + | chr7_1:72021809-72021828 | None:intergenic | 40.0% |
ATTTCCCAAGGAATCGCTAA+GGG | - | chr7_1:72021998-72022017 | Msa1035930:intron | 40.0% | |
AGTGTGAGATAAGAGAGTCA+TGG | + | chr7_1:72022104-72022123 | None:intergenic | 40.0% | |
TTCAAACCAGAGAAGTCCAT+AGG | + | chr7_1:72022172-72022191 | None:intergenic | 40.0% | |
AAAGGGTCAAGTCTACAAGA+TGG | + | chr7_1:72022270-72022289 | None:intergenic | 40.0% | |
GTGAAGCAAGATATGCTTCA+TGG | - | chr7_1:72022367-72022386 | Msa1035930:CDS | 40.0% | |
AACTGTGGGATTCAAATTGG+GGG | - | chr7_1:72022496-72022515 | Msa1035930:CDS | 40.0% | |
ACTACCTCTGTAGCTAAACT+TGG | + | chr7_1:72022626-72022645 | None:intergenic | 40.0% | |
!! | CTAATTTCTAGCTACGAAGG+TGG | - | chr7_1:72022646-72022665 | Msa1035930:CDS | 40.0% |
! | GGCCAAGTTTATAAGGCTTT+TGG | - | chr7_1:72022667-72022686 | Msa1035930:CDS | 40.0% |
GTGACGACGATTATGTTTGA+TGG | - | chr7_1:72022709-72022728 | Msa1035930:CDS | 40.0% | |
CAACAGATTGGAGACATTCA+CGG | + | chr7_1:72022738-72022757 | None:intergenic | 40.0% | |
TTATGCTGTGAGGATGTTCA+TGG | + | chr7_1:72022891-72022910 | None:intergenic | 40.0% | |
GCATCAATAGTTATGCTGTG+AGG | + | chr7_1:72022901-72022920 | None:intergenic | 40.0% | |
TATGGCCCCAAGTTTATTGA+AGG | - | chr7_1:72022975-72022994 | Msa1035930:CDS | 40.0% | |
GATCTTGCAATTGGACCAAA+GGG | + | chr7_1:72023039-72023058 | None:intergenic | 40.0% | |
TGATCTTGCAATTGGACCAA+AGG | + | chr7_1:72023040-72023059 | None:intergenic | 40.0% | |
! | CGCACCACCATTTCAATTTT+GGG | + | chr7_1:72023181-72023200 | None:intergenic | 40.0% |
! | CCAAAATTGAAATGGTGGTG+CGG | - | chr7_1:72023179-72023198 | Msa1035930:CDS | 40.0% |
! | TGTCTGAATTGGGAGTTGAT+TGG | + | chr7_1:72023287-72023306 | None:intergenic | 40.0% |
CCATTCATGAAGCCATCGTT+TGG | + | chr7_1:72015903-72015922 | None:intergenic | 45.0% | |
CCAAACGATGGCTTCATGAA+TGG | - | chr7_1:72015900-72015919 | Msa1035930:intron | 45.0% | |
GTTAACTGCGGGGTTGAAAT+TGG | - | chr7_1:72016490-72016509 | Msa1035930:CDS | 45.0% | |
TAACTGCGGGGTTGAAATTG+GGG | - | chr7_1:72016492-72016511 | Msa1035930:CDS | 45.0% | |
TAAAGGTGACGTCCTCAAGT+TGG | + | chr7_1:72016759-72016778 | None:intergenic | 45.0% | |
GGCAAATGGAGTTTCTTCTC+TGG | + | chr7_1:72016986-72017005 | None:intergenic | 45.0% | |
! | GGTGCTGGAAGATGGAATAA+GGG | - | chr7_1:72019251-72019270 | Msa1035930:intron | 45.0% |
GTGCTGGAAGATGGAATAAG+GGG | - | chr7_1:72019252-72019271 | Msa1035930:intron | 45.0% | |
ACGAGCTCTACCAACATGTT+TGG | + | chr7_1:72019645-72019664 | None:intergenic | 45.0% | |
TGGGGTGTAACCTAAAGTTC+TGG | + | chr7_1:72019792-72019811 | None:intergenic | 45.0% | |
TTGGTTGTTGTAGAAGACGC+TGG | + | chr7_1:72021259-72021278 | None:intergenic | 45.0% | |
TTGCAGTAGCAATGAAGAGG+AGG | - | chr7_1:72021637-72021656 | Msa1035930:intron | 45.0% | |
AAACCAGTGCATTGTCCAAG+CGG | - | chr7_1:72021739-72021758 | Msa1035930:intron | 45.0% | |
GGCTTCACGAATGGAGATTA+AGG | - | chr7_1:72021763-72021782 | Msa1035930:intron | 45.0% | |
! | TTGAAGGAGTGGAAGGCTTT+TGG | + | chr7_1:72021852-72021871 | None:intergenic | 45.0% |
AAAAGCCTTCCACTCCTTCA+AGG | - | chr7_1:72021851-72021870 | Msa1035930:CDS | 45.0% | |
AAAGCCTTCCACTCCTTCAA+GGG | - | chr7_1:72021852-72021871 | Msa1035930:CDS | 45.0% | |
GATTGAAACCCTTGAAGGAG+TGG | + | chr7_1:72021863-72021882 | None:intergenic | 45.0% | |
GATTTCCCAAGGAATCGCTA+AGG | - | chr7_1:72021997-72022016 | Msa1035930:intron | 45.0% | |
!! | AGAAGTCCATAGGTGCTACT+AGG | + | chr7_1:72022162-72022181 | None:intergenic | 45.0% |
! | GCATCTAGTTGATGTGAAGC+AGG | - | chr7_1:72022213-72022232 | Msa1035930:CDS | 45.0% |
GTGAAGCAGGATATGCTTCA+TGG | - | chr7_1:72022226-72022245 | Msa1035930:CDS | 45.0% | |
GTCTACAAGATGGATGCAGT+TGG | + | chr7_1:72022260-72022279 | None:intergenic | 45.0% | |
GTCTACAAGATGGATGCAGT+TGG | + | chr7_1:72022260-72022279 | None:intergenic | 45.0% | |
CAAGGGTGAAGTCTACAAGA+TGG | + | chr7_1:72022411-72022430 | None:intergenic | 45.0% | |
CTTGTAGACTTCACCCTTGA+TGG | - | chr7_1:72022412-72022431 | Msa1035930:CDS | 45.0% | |
CGAAGGTGGCCAAGTTTATA+AGG | - | chr7_1:72022660-72022679 | Msa1035930:CDS | 45.0% | |
CGCCTGACCACTATATTCAA+AGG | + | chr7_1:72022938-72022957 | None:intergenic | 45.0% | |
GCAATTGGACCAAAGGGAAA+TGG | + | chr7_1:72023033-72023052 | None:intergenic | 45.0% | |
! | CCGCACCACCATTTCAATTT+TGG | + | chr7_1:72023182-72023201 | None:intergenic | 45.0% |
CTCGTTCTGCGTTGCAAAAA+AGG | - | chr7_1:72023537-72023556 | Msa1035930:five_prime_UTR | 45.0% | |
!!! | ATAAGTAAATTTTTTTTTAT+AGG | - | chr7_1:72017825-72017844 | Msa1035930:intron | 5.0% |
!!! | TAAGTAAATTTTTTTTTATA+GGG | - | chr7_1:72017826-72017845 | Msa1035930:intron | 5.0% |
!!! | ATTATAACATTTAAAATAAA+GGG | + | chr7_1:72017929-72017948 | None:intergenic | 5.0% |
!!! | AATTATAACATTTAAAATAA+AGG | + | chr7_1:72017930-72017949 | None:intergenic | 5.0% |
!!! | GATTTTTAAATTAAAAAAAA+TGG | - | chr7_1:72018532-72018551 | Msa1035930:intron | 5.0% |
!!! | TTTTTTTTTTTTTTCATAAA+AGG | - | chr7_1:72020201-72020220 | Msa1035930:intron | 5.0% |
!!! | ATAAGTTTTTTTAAAAAAAA+AGG | - | chr7_1:72020288-72020307 | Msa1035930:intron | 5.0% |
!!! | TTTTAATTTAATTATAATTC+TGG | - | chr7_1:72021597-72021616 | Msa1035930:intron | 5.0% |
CATGATCCGTTCACTTCGAG+TGG | - | chr7_1:72016078-72016097 | Msa1035930:CDS | 50.0% | |
GTCTACAAGATGGATGCAGC+TGG | + | chr7_1:72016398-72016417 | None:intergenic | 50.0% | |
!! | GGGTGCTGGAAGATGGAATA+AGG | - | chr7_1:72019250-72019269 | Msa1035930:intron | 50.0% |
AACCATTTCGGAGGGAGAGT+GGG | + | chr7_1:72019763-72019782 | None:intergenic | 50.0% | |
AAACCATTTCGGAGGGAGAG+TGG | + | chr7_1:72019764-72019783 | None:intergenic | 50.0% | |
TTGTGTTAAGGGGACCGACT+TGG | + | chr7_1:72021196-72021215 | None:intergenic | 50.0% | |
GAAACCCTTGAAGGAGTGGA+AGG | + | chr7_1:72021859-72021878 | None:intergenic | 50.0% | |
GTAGCACCTATGGACTTCTC+TGG | - | chr7_1:72022163-72022182 | Msa1035930:CDS | 50.0% | |
GGATTCAAATTGGGGGAGTG+AGG | - | chr7_1:72022503-72022522 | Msa1035930:CDS | 50.0% | |
TGTAGGTTGTCAACGCGTAG+CGG | - | chr7_1:72023150-72023169 | Msa1035930:CDS | 50.0% | |
GAGGGAGAGAGGAAGAGAGA+GGG | + | chr7_1:72019718-72019737 | None:intergenic | 55.0% | |
AGAGGGAGAGAGGAAGAGAG+AGG | + | chr7_1:72019719-72019738 | None:intergenic | 55.0% | |
!! | GTTAAGGGGACCGACTTGGA+TGG | + | chr7_1:72021192-72021211 | None:intergenic | 55.0% |
GGCTCCCTTAGCGATTCCTT+GGG | + | chr7_1:72022005-72022024 | None:intergenic | 55.0% | |
TGGCTCCCTTAGCGATTCCT+TGG | + | chr7_1:72022006-72022025 | None:intergenic | 55.0% | |
GTGCTGCCTAGTAGCACCTA+TGG | - | chr7_1:72022153-72022172 | Msa1035930:CDS | 55.0% | |
GGGACGATTGGGAGTTGTTG+TGG | - | chr7_1:72023575-72023594 | Msa1035930:five_prime_UTR | 55.0% | |
CTGCGGGGTTGAAATTGGGG+AGG | - | chr7_1:72016495-72016514 | Msa1035930:CDS | 60.0% | |
GGAGAGAGGGAGAGAGGAGA+GGG | + | chr7_1:72019736-72019755 | None:intergenic | 60.0% | |
GAGAGTGGGAGAGGGAGAGA+GGG | + | chr7_1:72019749-72019768 | None:intergenic | 60.0% | |
TTCGGAGGGAGAGTGGGAGA+GGG | + | chr7_1:72019757-72019776 | None:intergenic | 60.0% | |
TTTCGGAGGGAGAGTGGGAG+AGG | + | chr7_1:72019758-72019777 | None:intergenic | 60.0% | |
CTCCCACTCTCCCTCCGAAA+TGG | - | chr7_1:72019758-72019777 | Msa1035930:intron | 60.0% | |
CCACCGCTTGGACAATGCAC+TGG | + | chr7_1:72021745-72021764 | None:intergenic | 60.0% | |
CCAGTGCATTGTCCAAGCGG+TGG | - | chr7_1:72021742-72021761 | Msa1035930:intron | 60.0% | |
CCATTCGTGAAGCCACCGCT+TGG | + | chr7_1:72021757-72021776 | None:intergenic | 60.0% | |
CCAAGCGGTGGCTTCACGAA+TGG | - | chr7_1:72021754-72021773 | Msa1035930:intron | 60.0% | |
GGGAGAGAGGAGAGGGAGAG+AGG | + | chr7_1:72019729-72019748 | None:intergenic | 65.0% | |
GGGAGAGAGGGAGAGAGGAG+AGG | + | chr7_1:72019737-72019756 | None:intergenic | 65.0% | |
GGAGAGGGAGAGAGGGAGAG+AGG | + | chr7_1:72019742-72019761 | None:intergenic | 65.0% | |
GGAGAGTGGGAGAGGGAGAG+AGG | + | chr7_1:72019750-72019769 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 72015547 | 72023618 | 72015547 | ID=Msa1035930;Name=Msa1035930 |
chr7_1 | mRNA | 72015547 | 72023618 | 72015547 | ID=Msa1035930-mRNA-1;Parent=Msa1035930;Name=Msa1035930-mRNA-1;_AED=0.21;_eAED=0.23;_QI=107|0.33|0.42|0.71|0.83|0.71|7|0|929 |
chr7_1 | exon | 72015547 | 72015648 | 72015547 | ID=Msa1035930-mRNA-1:exon:17512;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72016064 | 72017014 | 72016064 | ID=Msa1035930-mRNA-1:exon:17511;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72017239 | 72017522 | 72017239 | ID=Msa1035930-mRNA-1:exon:17510;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72019069 | 72019099 | 72019069 | ID=Msa1035930-mRNA-1:exon:17509;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72021850 | 72021999 | 72021850 | ID=Msa1035930-mRNA-1:exon:17508;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72022097 | 72023376 | 72022097 | ID=Msa1035930-mRNA-1:exon:17507;Parent=Msa1035930-mRNA-1 |
chr7_1 | exon | 72023520 | 72023618 | 72023520 | ID=Msa1035930-mRNA-1:exon:17506;Parent=Msa1035930-mRNA-1 |
chr7_1 | five_prime_UTR | 72023520 | 72023618 | 72023520 | ID=Msa1035930-mRNA-1:five_prime_utr;Parent=Msa1035930-mRNA-1 |
chr7_1 | five_prime_UTR | 72023369 | 72023376 | 72023369 | ID=Msa1035930-mRNA-1:five_prime_utr;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72022097 | 72023368 | 72022097 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72021850 | 72021999 | 72021850 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72019069 | 72019099 | 72019069 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72017239 | 72017522 | 72017239 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72016064 | 72017014 | 72016064 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
chr7_1 | CDS | 72015547 | 72015648 | 72015547 | ID=Msa1035930-mRNA-1:cds;Parent=Msa1035930-mRNA-1 |
Gene Sequence |
Protein sequence |