AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036190 MtrunA17_Chr7g0260331 95.845 361 11 2 1 357 1 361 0.0 703
Msa1036190 MtrunA17_Chr1g0204741 55.255 333 126 6 26 356 17 328 3.72e-116 340
Msa1036190 MtrunA17_Chr1g0185131 57.465 355 106 8 1 341 1 324 8.98e-116 339
Msa1036190 MtrunA17_Chr3g0135831 63.761 218 73 2 34 251 31 242 5.72e-96 290
Msa1036190 MtrunA17_Chr5g0410881 59.009 222 85 1 35 250 18 239 3.44e-88 274
Msa1036190 MtrunA17_Chr4g0039891 57.005 207 84 1 48 249 11 217 1.32e-77 246
Msa1036190 MtrunA17_Chr4g0071051 45.965 285 135 5 7 289 67 334 6.47e-74 235
Msa1036190 MtrunA17_Chr8g0379701 41.667 228 121 3 48 275 11 226 1.12e-53 182
Msa1036190 MtrunA17_Chr8g0392001 47.087 206 95 3 49 244 22 223 1.44e-53 181
Msa1036190 MtrunA17_Chr6g0485571 43.415 205 107 3 49 253 11 206 6.91e-53 178
Msa1036190 MtrunA17_Chr8g0378061 47.059 204 98 6 50 252 23 217 1.15e-49 173
Msa1036190 MtrunA17_Chr6g0467041 44.878 205 99 5 49 250 22 215 1.39e-49 169
Msa1036190 MtrunA17_Chr2g0284481 36.800 250 131 5 48 284 14 249 6.78e-47 163
Msa1036190 MtrunA17_Chr2g0330821 43.386 189 102 2 43 231 73 256 5.21e-46 160
Msa1036190 MtrunA17_Chr5g0402291 66.667 102 34 0 46 147 6 107 6.01e-45 155
Msa1036190 MtrunA17_Chr3g0134031 68.932 103 31 1 43 145 18 119 2.92e-44 156
Msa1036190 MtrunA17_Chr5g0397881 65.957 94 32 0 47 140 22 115 3.11e-42 150
Msa1036190 MtrunA17_Chr1g0203601 61.702 94 36 0 47 140 16 109 1.38e-40 144
Msa1036190 MtrunA17_Chr5g0441531 65.957 94 32 0 47 140 23 116 4.03e-40 142
Msa1036190 MtrunA17_Chr7g0257331 45.062 162 77 3 40 189 9 170 9.49e-40 140
Msa1036190 MtrunA17_Chr6g0472421 60.638 94 37 0 47 140 31 124 3.28e-39 142
Msa1036190 MtrunA17_Chr8g0375041 43.605 172 78 3 44 199 4 172 2.70e-38 137
Msa1036190 MtrunA17_Chr4g0047421 38.462 182 97 5 47 224 31 201 7.58e-33 121
Msa1036190 MtrunA17_Chr1g0179311 43.636 165 88 4 106 270 11 170 1.62e-30 119
Msa1036190 MtrunA17_Chr1g0179321 66.216 74 25 0 35 108 35 108 6.30e-30 110
Msa1036190 MtrunA17_Chr4g0023771 57.143 70 29 1 40 108 6 75 1.96e-21 88.2
Msa1036190 MtrunA17_Chr2g0330841 32.544 169 103 5 109 273 41 202 4.81e-19 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036190 AT3G22830.1 54.881 379 116 9 22 355 34 402 2.08e-128 374
Msa1036190 AT3G51910.1 55.088 285 89 6 39 322 19 265 8.23e-98 291
Msa1036190 AT2G26150.1 47.706 327 153 7 36 356 31 345 5.39e-93 281
Msa1036190 AT2G26150.4 47.706 327 153 7 36 356 31 345 5.39e-93 281
Msa1036190 AT3G63350.1 45.312 320 127 5 27 344 6 279 2.91e-85 259
Msa1036190 AT1G32330.2 58.333 228 80 4 36 250 24 249 4.43e-83 261
Msa1036190 AT1G32330.1 58.333 228 80 4 36 250 24 249 5.07e-83 261
Msa1036190 AT4G17750.1 48.551 276 115 5 26 280 23 292 6.74e-83 261
Msa1036190 AT5G16820.1 51.538 260 110 5 27 276 10 263 4.33e-80 253
Msa1036190 AT5G16820.2 51.538 260 110 5 27 276 10 263 4.33e-80 253
Msa1036190 AT3G02990.1 53.913 230 99 3 48 270 22 251 1.70e-78 248
Msa1036190 AT5G43840.1 45.652 276 118 6 35 297 5 261 1.13e-74 233
Msa1036190 AT5G03720.2 47.638 254 117 5 35 282 41 284 4.69e-69 222
Msa1036190 AT5G03720.1 47.638 254 117 5 35 282 41 284 4.69e-69 222
Msa1036190 AT1G67970.1 51.053 190 91 2 49 237 19 207 1.25e-60 199
Msa1036190 AT5G54070.1 41.262 206 108 3 42 244 63 258 6.12e-54 181
Msa1036190 AT3G24520.1 42.857 203 92 2 49 251 17 195 9.49e-51 172
Msa1036190 AT4G13980.1 43.478 207 102 4 50 252 24 219 6.48e-50 174
Msa1036190 AT2G26150.3 40.551 254 133 7 109 356 49 290 8.14e-47 161
Msa1036190 AT2G26150.2 40.551 254 133 7 109 356 49 290 8.14e-47 161
Msa1036190 AT4G18880.1 43.455 191 108 0 41 231 7 197 1.08e-44 158
Msa1036190 AT1G46264.1 66.981 106 34 1 39 144 24 128 3.84e-43 153
Msa1036190 AT5G45710.3 41.146 192 111 2 48 239 12 201 7.71e-43 152
Msa1036190 AT5G45710.1 41.146 192 111 2 48 239 12 201 7.71e-43 152
Msa1036190 AT4G11660.1 63.636 99 35 1 47 145 57 154 2.13e-40 146
Msa1036190 AT4G36990.1 56.522 115 43 1 47 161 12 119 6.84e-40 142
Msa1036190 AT5G62020.1 50.769 130 60 1 47 172 21 150 8.70e-40 143
Msa1036190 AT2G41690.1 62.766 94 35 0 47 140 38 131 2.00e-39 140
Msa1036190 AT4G18870.1 36.290 124 79 0 38 161 135 258 1.47e-24 102
Msa1036190 AT4G18870.1 49.438 89 40 2 50 136 14 99 5.41e-22 94.7

Find 159 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTAAATTCCACTATTTC+TGG 0.082987 7_1:-72353126 None:intergenic
TCAGCAATCTTCACATTAAT+TGG 0.154501 7_1:-72355372 None:intergenic
TTTAAAATTAACAAATAATA+AGG 0.156314 7_1:-72346718 None:intergenic
AAGATGAAGCATTGGAAATT+AGG 0.171413 7_1:-72346580 None:intergenic
TCATGGATCATGATATATTT+TGG 0.171436 7_1:+72352653 Msa1036190:three_prime_UTR
GATATGTGAAAGAAGAAATT+TGG 0.214786 7_1:-72346552 None:intergenic
TTCCTCTGTTTGAGTTCTTT+TGG 0.238917 7_1:+72355957 Msa1036190:three_prime_UTR
AAGAACTTGATGAAGGGTTT+TGG 0.252613 7_1:+72348504 Msa1036190:CDS
ACATAGAAGGACACAGTTTC+TGG 0.285692 7_1:-72353176 None:intergenic
TTTGCAAACTCCCATTTATC+AGG 0.290173 7_1:-72347921 None:intergenic
CATGGCGGTGACACCATTTC+TGG 0.299446 7_1:+72352619 Msa1036190:three_prime_UTR
CTTTAGCTTTCTTCAAATAT+AGG 0.303852 7_1:+72346406 Msa1036190:five_prime_UTR
TGGTGCTAGCTTTGTTGTTT+GGG 0.306922 7_1:+72347034 Msa1036190:CDS
CGATTAAGCGTAATTTATTT+CGG 0.307152 7_1:-72348644 None:intergenic
GTGGTGCTAGCTTTGTTGTT+TGG 0.312326 7_1:+72347033 Msa1036190:CDS
AATGAAAATGTTCATAATAA+AGG 0.320104 7_1:-72346654 None:intergenic
ATGTTTCTCTCTTATTGATT+AGG 0.325883 7_1:+72348957 Msa1036190:three_prime_UTR
TTAGCTAAGTTATGCACATT+TGG 0.329783 7_1:-72353215 None:intergenic
AGATGAAGCATTGGAAATTA+GGG 0.336133 7_1:-72346579 None:intergenic
AATTTGGAAAGTCGTTAATA+AGG 0.355417 7_1:-72346472 None:intergenic
TGTGTTGAAGTTGGTCGTTT+TGG 0.363566 7_1:+72348047 Msa1036190:CDS
CATTTGTTGCTGCTTAATTT+CGG 0.365368 7_1:-72348198 None:intergenic
AGGAGAAGGCCAATTGAGTA+TGG 0.367381 7_1:+72348323 Msa1036190:CDS
CTTGATTCTCCATACTCAAT+TGG 0.368141 7_1:-72348332 None:intergenic
CTGTTGGTGGTTAACCTTGT+CGG 0.372067 7_1:+72349263 Msa1036190:three_prime_UTR
GTCTGGTATCGTGGTGAGTT+TGG 0.376393 7_1:-72348911 None:intergenic
TCTAAATACTCTTCTTTCAC+TGG 0.377680 7_1:-72346834 None:intergenic
TTCCTCCATTGCTTGAAGAA+TGG 0.378113 7_1:-72348162 None:intergenic
ACAGTTTCTGGCGTAGAGAT+AGG 0.388624 7_1:-72353164 None:intergenic
TTGAAATTTGAGCGCATGTC+TGG 0.390961 7_1:-72348928 None:intergenic
TACATAATATATGTGAGATC+CGG 0.397301 7_1:+72355804 Msa1036190:three_prime_UTR
CAACAAGTCACATAGTTTCA+TGG 0.398902 7_1:+72347003 Msa1036190:CDS
CGTGGTCTTGGTTGGCAACT+TGG 0.405663 7_1:+72348733 Msa1036190:three_prime_UTR
CACAAAGACATTTGATGTTG+TGG 0.406218 7_1:+72346971 Msa1036190:CDS
GACAACAAAATTTCCAGAAA+TGG 0.407913 7_1:-72352632 None:intergenic
CACTCTTTGAAGGGAACGTC+AGG 0.413742 7_1:+72353083 Msa1036190:three_prime_UTR
TTAAAATTAACAAATAATAA+GGG 0.418523 7_1:-72346717 None:intergenic
GATTAACCTTCTTCGTATGA+TGG 0.421745 7_1:+72348668 Msa1036190:three_prime_UTR
AATACACCGTAAAACTTGTA+AGG 0.423937 7_1:-72355730 None:intergenic
TAACAGGTCAAGTGTATGTT+TGG 0.426297 7_1:+72348844 Msa1036190:three_prime_UTR
GAGGATTAGATTCAATGAAA+TGG 0.427774 7_1:-72346630 None:intergenic
AAATGGGAGTTTGCAAATGA+AGG 0.436132 7_1:+72347927 Msa1036190:CDS
GCTATGGAAATGCAGGGTCT+TGG 0.436909 7_1:+72348419 Msa1036190:CDS
TCCAATCGCTTTGGTTACTT+AGG 0.437897 7_1:+72348614 Msa1036190:CDS
ACTTGACCTGTTACTACAAA+AGG 0.441272 7_1:-72348834 None:intergenic
TCAAATGTCTTTGTGAGAAA+TGG 0.443148 7_1:-72346963 None:intergenic
GGACACTAGTAGCGTGGTCT+TGG 0.446248 7_1:+72348721 Msa1036190:three_prime_UTR
AGGTCTCTGGAGAAAGCATT+TGG 0.449261 7_1:-72347059 None:intergenic
TGCTGAGTTAAGAGAAGCAT+TGG 0.450097 7_1:+72355389 Msa1036190:three_prime_UTR
CCCCATGAGCTTAGCTCAGT+TGG 0.453004 7_1:+72355772 Msa1036190:three_prime_UTR
TTGTTGTGTTTGAAGTATCT+AGG 0.454609 7_1:-72347086 None:intergenic
AATTCGCGAACTAAAATTTG+AGG 0.455818 7_1:-72346788 None:intergenic
GGAAGGAGCAGTGTTAGATA+TGG 0.456890 7_1:+72348368 Msa1036190:CDS
ATGAATAAAGAACTTGATGA+AGG 0.466508 7_1:+72348497 Msa1036190:CDS
CTTACTGTGAAATCAATTCC+AGG 0.468002 7_1:-72352688 None:intergenic
AAGAGGTGGTGGAGAGCTTG+AGG 0.469597 7_1:+72348442 Msa1036190:CDS
GTATCTAGGAAGAAGGTCTC+TGG 0.470929 7_1:-72347072 None:intergenic
AGAGCTTGAGGAAGAGATTG+AGG 0.477721 7_1:+72348454 Msa1036190:CDS
AGTAATTGCTGAATAAAAGC+TGG 0.482397 7_1:-72348251 None:intergenic
ATTCGCGAACTAAAATTTGA+GGG 0.489536 7_1:-72346787 None:intergenic
TTGTGACCGGAGTTTGAACC+CGG 0.496410 7_1:-72355823 None:intergenic
CAAGGTCATTGTGTTGAAGT+TGG 0.497401 7_1:+72348038 Msa1036190:CDS
GTGTATGTTTGGTATACCAA+TGG 0.498293 7_1:+72348855 Msa1036190:three_prime_UTR
CGACAAGGTTAACCACCAAC+AGG 0.499241 7_1:-72349262 None:intergenic
GTGGCCAACATGAACATAGA+AGG 0.501930 7_1:-72353189 None:intergenic
GTTATTCCACGGCCAATGGA+GGG 0.502097 7_1:+72346918 Msa1036190:CDS
GAGTTAAAAGCCAGAAATAG+TGG 0.502355 7_1:+72353116 Msa1036190:three_prime_UTR
GTGCATAACTTAGCTAAAGA+TGG 0.502933 7_1:+72353221 Msa1036190:three_prime_UTR
AAATGTGGTACACTCTTTGA+AGG 0.503212 7_1:+72353073 Msa1036190:three_prime_UTR
CAGGGTCTTGGAAGAGGTGG+TGG 0.504100 7_1:+72348431 Msa1036190:CDS
GGTTGTTATTCCACGGCCAA+TGG 0.506460 7_1:+72346914 Msa1036190:CDS
TGGATTTGAAGTGTCAGAGT+TGG 0.506828 7_1:+72348388 Msa1036190:CDS
GATTGTTGTTGTGAAGTACT+AGG 0.510219 7_1:-72348011 None:intergenic
AATTAAGCAGCAACAAATGA+TGG 0.512562 7_1:+72348202 Msa1036190:CDS
TGAGCTTAGCTCAGTTGGTA+AGG 0.513111 7_1:+72355777 Msa1036190:three_prime_UTR
ATATTTGAAGAAAGCTAAAG+AGG 0.516279 7_1:-72346403 None:intergenic
ACCTAAGTAACCAAAGCGAT+TGG 0.517991 7_1:-72348615 None:intergenic
TGTAATTTCGACCAACCCAT+TGG 0.518053 7_1:-72348871 None:intergenic
GCAAATGAAGGATTTCTAAG+AGG 0.518927 7_1:+72347939 Msa1036190:CDS
CTATAGGTGACATCTCCTGC+TGG 0.519297 7_1:+72353050 Msa1036190:intron
ATGATGGACTGATTAAGATT+CGG 0.520744 7_1:+72348684 Msa1036190:three_prime_UTR
TGTTATTCCACGGCCAATGG+AGG 0.521139 7_1:+72346917 Msa1036190:CDS
AATGTGTTGTCCAATCGCTT+TGG 0.521879 7_1:+72348605 Msa1036190:CDS
ACTTCATGAAGCCCCTCCAT+TGG 0.523280 7_1:-72346930 None:intergenic
TGAGATCCGGGTTCAAACTC+CGG 0.524085 7_1:+72355817 Msa1036190:three_prime_UTR
GTTTGAAGTATCTAGGAAGA+AGG 0.525332 7_1:-72347079 None:intergenic
TGAAGCCCCTCCATTGGCCG+TGG 0.526845 7_1:-72346924 None:intergenic
TCAGCAATTACTTCAACAGA+AGG 0.528664 7_1:+72348262 Msa1036190:CDS
GTTGATTGGACAAGAACCTC+TGG 0.533008 7_1:+72348994 Msa1036190:three_prime_UTR
TTGAGTGAAGATCCTGTTGG+TGG 0.533250 7_1:+72349250 Msa1036190:three_prime_UTR
TGAAACTATGTGACTTGTTG+TGG 0.534841 7_1:-72347000 None:intergenic
TAGAGATGATTATTAACTCA+AGG 0.540448 7_1:+72349024 Msa1036190:three_prime_UTR
AATGCTGGCTATGGAAATGC+AGG 0.541022 7_1:+72348412 Msa1036190:CDS
GAATCAAGTAATGGTGGTGA+TGG 0.544567 7_1:+72348347 Msa1036190:CDS
ACATAATATATGTGAGATCC+GGG 0.545828 7_1:+72355805 Msa1036190:three_prime_UTR
CTAAATACTCTTCTTTCACT+GGG 0.546539 7_1:-72346833 None:intergenic
TTTAGAAGAAGTGAAAGCAA+AGG 0.548007 7_1:-72346691 None:intergenic
GAAATGCAGGGTCTTGGAAG+AGG 0.548123 7_1:+72348425 Msa1036190:CDS
TGACAAACAAGTGTTAATGA+TGG 0.548560 7_1:+72348100 Msa1036190:CDS
TCAACAGAAGGAAAAGAGAA+AGG 0.548892 7_1:+72348274 Msa1036190:CDS
ATCAGTCCATCATACGAAGA+AGG 0.549857 7_1:-72348674 None:intergenic
TATGAAAGAGGAAGTGATGA+GGG 0.553152 7_1:+72346885 Msa1036190:CDS
TTATTCCACGGCCAATGGAG+GGG 0.553219 7_1:+72346919 Msa1036190:CDS
GAAACTATGTGACTTGTTGT+GGG 0.554070 7_1:-72346999 None:intergenic
TTCTTCAAGCAATGGAGGAA+AGG 0.554568 7_1:+72348165 Msa1036190:CDS
ACCAACTGAGCTAAGCTCAT+GGG 0.556175 7_1:-72355773 None:intergenic
TTCTCTCTTATTGATTAGGT+AGG 0.556399 7_1:+72348961 Msa1036190:three_prime_UTR
ATGATTCAGAAGATGTAGAA+TGG 0.562150 7_1:+72349184 Msa1036190:three_prime_UTR
AGAGTTGGAAATGCTGGCTA+TGG 0.563110 7_1:+72348403 Msa1036190:CDS
GATCAACGGTTGTTATTCCA+CGG 0.563873 7_1:+72346907 Msa1036190:CDS
CTAAAGAGGAAATGTTGTGA+GGG 0.569169 7_1:-72346389 None:intergenic
ATGGAGGGGCTTCATGAAGT+AGG 0.569714 7_1:+72346933 Msa1036190:CDS
CAAGTAATGGTGGTGATGGA+AGG 0.570233 7_1:+72348351 Msa1036190:CDS
AGTGTCAGAGTTGGAAATGC+TGG 0.571819 7_1:+72348397 Msa1036190:CDS
TGAATAAAGAACTTGATGAA+GGG 0.573949 7_1:+72348498 Msa1036190:CDS
ATCCATTCTTCAAGCAATGG+AGG 0.576630 7_1:+72348160 Msa1036190:CDS
TCATCATCGATATATGAAAG+AGG 0.577051 7_1:+72346873 Msa1036190:CDS
AAGATGCTATTACTAAGAAG+AGG 0.582617 7_1:+72348303 Msa1036190:CDS
TACCAACTGAGCTAAGCTCA+TGG 0.582928 7_1:-72355774 None:intergenic
ATAGTTTCATGGAGCAGAAG+TGG 0.585048 7_1:+72347014 Msa1036190:CDS
GAGTGTACCACATTTCCAGC+AGG 0.585486 7_1:-72353065 None:intergenic
AAGATCCATTCTTCAAGCAA+TGG 0.586126 7_1:+72348157 Msa1036190:CDS
TGTATGTTTGGTATACCAAT+GGG 0.590046 7_1:+72348856 Msa1036190:three_prime_UTR
GTGTCCTTCTATGTTCATGT+TGG 0.591878 7_1:+72353185 Msa1036190:three_prime_UTR
ACTAGTAGCGTGGTCTTGGT+TGG 0.592151 7_1:+72348725 Msa1036190:three_prime_UTR
AGTTATGCACATTTGGAATG+TGG 0.602220 7_1:-72353208 None:intergenic
GAGTACAAGCTTATTGCAAG+TGG 0.604992 7_1:+72355656 Msa1036190:three_prime_UTR
AGGAAGTGATGAGGGATCAA+CGG 0.610055 7_1:+72346893 Msa1036190:CDS
GACATCTCCTGCTGGAAATG+TGG 0.610948 7_1:+72353058 Msa1036190:three_prime_UTR
AATGTGGTACACTCTTTGAA+GGG 0.611243 7_1:+72353074 Msa1036190:three_prime_UTR
GAGTATGGAGAATCAAGTAA+TGG 0.613238 7_1:+72348338 Msa1036190:CDS
ATGCAGGGTCTTGGAAGAGG+TGG 0.614702 7_1:+72348428 Msa1036190:CDS
CCAACTGAGCTAAGCTCATG+GGG 0.616979 7_1:-72355772 None:intergenic
ATATGAAAGAGGAAGTGATG+AGG 0.618653 7_1:+72346884 Msa1036190:CDS
CTATTACTAAGAAGAGGAGA+AGG 0.622937 7_1:+72348309 Msa1036190:CDS
GATTCGGACTCAAAATCGAT+CGG 0.623594 7_1:+72348700 Msa1036190:three_prime_UTR
AAAGACATTTGATGTTGTGG+AGG 0.626606 7_1:+72346974 Msa1036190:CDS
TCGTTAATAAGGCAGTTGAA+AGG 0.626686 7_1:-72346461 None:intergenic
AAATGGTGATGAGTGTAAGA+AGG 0.628298 7_1:-72346613 None:intergenic
AGCCAAAAGAACTCAAACAG+AGG 0.629413 7_1:-72355959 None:intergenic
AATGTCTTTGTGAGAAATGG+TGG 0.633018 7_1:-72346960 None:intergenic
CTCTTTGAAGGGAACGTCAG+GGG 0.640550 7_1:+72353085 Msa1036190:three_prime_UTR
GCTAAAGAGGAAATGTTGTG+AGG 0.643253 7_1:-72346390 None:intergenic
TTCATATATCGATGATGACG+AGG 0.649679 7_1:-72346868 None:intergenic
TGTTTGGTATACCAATGGGT+TGG 0.652950 7_1:+72348860 Msa1036190:three_prime_UTR
TATGGAGAATCAAGTAATGG+TGG 0.653267 7_1:+72348341 Msa1036190:CDS
ACTCTTTGAAGGGAACGTCA+GGG 0.654256 7_1:+72353084 Msa1036190:three_prime_UTR
AAATGTTCATAATAAAGGAG+AGG 0.661298 7_1:-72346649 None:intergenic
GTCTTTGTGAGAAATGGTGG+TGG 0.661352 7_1:-72346957 None:intergenic
TGAGCGCATGTCTGGTATCG+TGG 0.664697 7_1:-72348920 None:intergenic
TCATCTCTATCAACTACCAG+AGG 0.673100 7_1:-72349010 None:intergenic
TCGATCGGACACTAGTAGCG+TGG 0.693161 7_1:+72348715 Msa1036190:three_prime_UTR
TCACAACAACAATCATCACA+AGG 0.699849 7_1:+72348020 Msa1036190:CDS
GCAATGGAGGAAAGGCTACG+TGG 0.702933 7_1:+72348173 Msa1036190:CDS
AAACTTGTAAGGTCTACACT+CGG 0.707311 7_1:-72355719 None:intergenic
AAACTATGTGACTTGTTGTG+GGG 0.712916 7_1:-72346998 None:intergenic
GTATCAGAGTATGTTGAACA+TGG 0.734375 7_1:+72352601 Msa1036190:intron
ATGCTGGCTATGGAAATGCA+GGG 0.739262 7_1:+72348413 Msa1036190:CDS
TCAGAGTATGTTGAACATGG+CGG 0.783314 7_1:+72352604 Msa1036190:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAAAATATTAAAAA+TGG + chr7_1:72350845-72350864 Msa1036190:intron 0.0%
!! ATTATTATTAAAACAATAAG+AGG - chr7_1:72349145-72349164 None:intergenic 10.0%
!!! ATTATTTTTTTAAATGAGAA+AGG - chr7_1:72349443-72349462 None:intergenic 10.0%
!! AATATATAAAGAATTATTAG+GGG + chr7_1:72349460-72349479 Msa1036190:intron 10.0%
!! ACAAATCATTAATTAAATTA+AGG - chr7_1:72349704-72349723 None:intergenic 10.0%
!!! TCTAATATTTTGTATAAATT+TGG - chr7_1:72350096-72350115 None:intergenic 10.0%
!!! GAAATCATTTTTTTTTTTTA+GGG - chr7_1:72350730-72350749 None:intergenic 10.0%
!!! AGAAATCATTTTTTTTTTTT+AGG - chr7_1:72350731-72350750 None:intergenic 10.0%
!!! TTATATTTTAGAATTTTTGT+TGG - chr7_1:72353499-72353518 None:intergenic 10.0%
!!! ATTCTAAAATATAATGTTAA+TGG + chr7_1:72353505-72353524 Msa1036190:intron 10.0%
!!! AATATAATGTTATTTTCAAA+GGG + chr7_1:72353719-72353738 Msa1036190:intron 10.0%
!! ATTAATTCAAAATAATTGTT+TGG + chr7_1:72354580-72354599 Msa1036190:intron 10.0%
!!! TTTTTTTTTTTTTTGTGTGA+AGG - chr7_1:72346525-72346544 None:intergenic 15.0%
!! AATGAAAATGTTCATAATAA+AGG - chr7_1:72346657-72346676 None:intergenic 15.0%
!!! TTAAGATCAAAATTTTCTTT+TGG - chr7_1:72347200-72347219 None:intergenic 15.0%
!! AAAATTAAATCTAAGAAGAT+TGG + chr7_1:72347246-72347265 Msa1036190:intron 15.0%
!!! ATTTTACATTACTTGTATAT+TGG + chr7_1:72347332-72347351 Msa1036190:intron 15.0%
!! ATTCAGATAACATATATAAA+AGG - chr7_1:72347436-72347455 None:intergenic 15.0%
!!! TTTTATGGAGTTTAAAAAAA+AGG - chr7_1:72347601-72347620 None:intergenic 15.0%
!! TAGAAACACAAAAATTTAAA+TGG - chr7_1:72348797-72348816 None:intergenic 15.0%
!! AACAATTGTAAAGTTTAAAA+GGG - chr7_1:72349305-72349324 None:intergenic 15.0%
!! AAACAATTGTAAAGTTTAAA+AGG - chr7_1:72349306-72349325 None:intergenic 15.0%
!! ATATATAAAGAATTATTAGG+GGG + chr7_1:72349461-72349480 Msa1036190:intron 15.0%
!!! ATATTAGAGATTTTTCAAAA+GGG + chr7_1:72349632-72349651 Msa1036190:intron 15.0%
!!! TTCAACATATTCTTTTTTAT+TGG + chr7_1:72350049-72350068 Msa1036190:intron 15.0%
!!! TAGAAGTATTACTATTTTAT+TGG - chr7_1:72350450-72350469 None:intergenic 15.0%
!! TGTTAAGTTAAATTATTAGT+TGG + chr7_1:72350594-72350613 Msa1036190:intron 15.0%
!!! TCATTTTTTTAACGAATTTA+TGG - chr7_1:72352073-72352092 None:intergenic 15.0%
!!! GAATATAATGTTATTTTCAA+AGG + chr7_1:72353718-72353737 Msa1036190:intron 15.0%
!!! ATATAATGTTATTTTCAAAG+GGG + chr7_1:72353720-72353739 Msa1036190:intron 15.0%
!!! TTCATTTTCTTTGTAAATTA+TGG - chr7_1:72353974-72353993 None:intergenic 15.0%
!!! AATAATGGAAATATTTTCTA+AGG + chr7_1:72354481-72354500 Msa1036190:intron 15.0%
!!! ATTTACTTATTTTTGCTTTT+GGG + chr7_1:72355333-72355352 Msa1036190:intron 15.0%
!! TACAAATAAGTAAGAAAAAT+GGG - chr7_1:72355916-72355935 None:intergenic 15.0%
!! TTACAAATAAGTAAGAAAAA+TGG - chr7_1:72355917-72355936 None:intergenic 15.0%
!! AAGAAAAAAAAAACAAGATG+AGG - chr7_1:72346439-72346458 None:intergenic 20.0%
!!! TTTCTTTTGGTTACTTAATT+GGG - chr7_1:72347187-72347206 None:intergenic 20.0%
!!! TTTTCTTTTGGTTACTTAAT+TGG - chr7_1:72347188-72347207 None:intergenic 20.0%
!!! CCAGATAATACTATTTTTTA+TGG - chr7_1:72347616-72347635 None:intergenic 20.0%
!! CCATAAAAAATAGTATTATC+TGG + chr7_1:72347613-72347632 Msa1036190:intron 20.0%
!! AATAAAAAACCTAACTCATA+TGG - chr7_1:72347845-72347864 None:intergenic 20.0%
!!! TTTTATTTTAAATGTCGATG+TGG + chr7_1:72347858-72347877 Msa1036190:intron 20.0%
!!! TTTATTTTAAATGTCGATGT+GGG + chr7_1:72347859-72347878 Msa1036190:intron 20.0%
!!! ACTCAATTTTTTTGTATACA+GGG + chr7_1:72347882-72347901 Msa1036190:intron 20.0%
!! AAAAATTGATCCTGATAAAT+GGG + chr7_1:72347911-72347930 Msa1036190:CDS 20.0%
!!! ACATTCTTTTTTTTTTGAGT+GGG - chr7_1:72349086-72349105 None:intergenic 20.0%
!!! TACATTCTTTTTTTTTTGAG+TGG - chr7_1:72349087-72349106 None:intergenic 20.0%
!!! GATATTAGAGATTTTTCAAA+AGG + chr7_1:72349631-72349650 Msa1036190:intron 20.0%
!!! TATTAGAGATTTTTCAAAAG+GGG + chr7_1:72349633-72349652 Msa1036190:intron 20.0%
!! TATGTCCTTAAAAAAAAAAG+TGG - chr7_1:72350165-72350184 None:intergenic 20.0%
!!! TTTTCCATGATTTATTTTGT+CGG + chr7_1:72350240-72350259 Msa1036190:intron 20.0%
!! AAAAATAAAATGACCAAAAG+TGG - chr7_1:72350478-72350497 None:intergenic 20.0%
!!! TATTATAATGAGTTTTTTGC+AGG - chr7_1:72350939-72350958 None:intergenic 20.0%
!! ACTCATTATAATATTGTACA+AGG + chr7_1:72350946-72350965 Msa1036190:intron 20.0%
!! ATAATATTGTACAAGGTATA+TGG + chr7_1:72350953-72350972 Msa1036190:intron 20.0%
!! ATAAACTTTGCTTATCAAAA+TGG - chr7_1:72351064-72351083 None:intergenic 20.0%
!! TGATAAGCAAAGTTTATTAA+TGG + chr7_1:72351067-72351086 Msa1036190:intron 20.0%
!! GATAAGCAAAGTTTATTAAT+GGG + chr7_1:72351068-72351087 Msa1036190:intron 20.0%
!!! TAGCACTCATATTTTATAAT+GGG - chr7_1:72351117-72351136 None:intergenic 20.0%
!!! TTAGCACTCATATTTTATAA+TGG - chr7_1:72351118-72351137 None:intergenic 20.0%
!!! NNNTTAATGTCACTCTTTTT+TGG + chr7_1:72351913-72351932 Msa1036190:intron 20.0%
!!! TTTATGTTTTGTAATGTTGT+TGG - chr7_1:72352224-72352243 None:intergenic 20.0%
!! ATTAACAATCATAACAAAGT+GGG + chr7_1:72352472-72352491 Msa1036190:intron 20.0%
!! TTTGAATTCTCTAATTTAAC+TGG + chr7_1:72353355-72353374 Msa1036190:intron 20.0%
!!! TTAATGGACCAATAAAATTA+AGG + chr7_1:72353521-72353540 Msa1036190:intron 20.0%
!!! TATAATGTTATTTTCAAAGG+GGG + chr7_1:72353721-72353740 Msa1036190:intron 20.0%
!! TTCTTAGACTTAGTATATAA+TGG + chr7_1:72353771-72353790 Msa1036190:intron 20.0%
!! TCTTAGACTTAGTATATAAT+GGG + chr7_1:72353772-72353791 Msa1036190:intron 20.0%
!!! TTAGTTTCTCCTTTTATAAT+GGG + chr7_1:72353795-72353814 Msa1036190:intron 20.0%
!!! GTTGTTTAGATTTTTTTGAA+AGG - chr7_1:72353925-72353944 None:intergenic 20.0%
!! GAGGATATGATAAAAAAAAT+TGG - chr7_1:72354359-72354378 None:intergenic 20.0%
!!! ATTATTTGAAGCCTTATAAA+AGG - chr7_1:72354467-72354486 None:intergenic 20.0%
!!! TTTTATAAGGCTTCAAATAA+TGG + chr7_1:72354466-72354485 Msa1036190:intron 20.0%
!!! AAATATTGACTTAGAGTATT+TGG + chr7_1:72355027-72355046 Msa1036190:intron 20.0%
!! ATAAGTAAATGAAAACTACT+TGG - chr7_1:72355323-72355342 None:intergenic 20.0%
!!! CATTTACTTATTTTTGCTTT+TGG + chr7_1:72355332-72355351 Msa1036190:intron 20.0%
!!! GATTTTTTTTTTTTTGTGAC+CGG - chr7_1:72355839-72355858 None:intergenic 20.0%
!! AAAAAAATCACAATGTATTG+CGG + chr7_1:72355850-72355869 Msa1036190:three_prime_UTR 20.0%
! ATATTTGAAGAAAGCTAAAG+AGG - chr7_1:72346406-72346425 None:intergenic 25.0%
!!! CTTTAGCTTTCTTCAAATAT+AGG + chr7_1:72346406-72346425 Msa1036190:five_prime_UTR 25.0%
! AATTTGGAAAGTCGTTAATA+AGG - chr7_1:72346475-72346494 None:intergenic 25.0%
!! GTTTTGTGAAAGAAGAAATT+TGG - chr7_1:72346491-72346510 None:intergenic 25.0%
! GATATGTGAAAGAAGAAATT+TGG - chr7_1:72346555-72346574 None:intergenic 25.0%
! AAAGAAAAAAGATGAAGCAT+TGG - chr7_1:72346591-72346610 None:intergenic 25.0%
! AAATGTTCATAATAAAGGAG+AGG - chr7_1:72346652-72346671 None:intergenic 25.0%
!!! AAATATTATTTAGCTTGCGT+AGG - chr7_1:72347396-72347415 None:intergenic 25.0%
! TATTTATTGCCATATGAGTT+AGG + chr7_1:72347833-72347852 Msa1036190:intron 25.0%
!!! GACTCAATTTTTTTGTATAC+AGG + chr7_1:72347881-72347900 Msa1036190:intron 25.0%
! GAAAAATTGATCCTGATAAA+TGG + chr7_1:72347910-72347929 Msa1036190:CDS 25.0%
!! TTTTAGCAAACATTAAGAGA+AGG + chr7_1:72347973-72347992 Msa1036190:CDS 25.0%
! ATGAATAAAGAACTTGATGA+AGG + chr7_1:72348497-72348516 Msa1036190:CDS 25.0%
! TGAATAAAGAACTTGATGAA+GGG + chr7_1:72348498-72348517 Msa1036190:CDS 25.0%
! CGATTAAGCGTAATTTATTT+CGG - chr7_1:72348647-72348666 None:intergenic 25.0%
!! ATGTTTCTCTCTTATTGATT+AGG + chr7_1:72348957-72348976 Msa1036190:three_prime_UTR 25.0%
! TAGAGATGATTATTAACTCA+AGG + chr7_1:72349024-72349043 Msa1036190:three_prime_UTR 25.0%
!! TGAATCATCTACATTTGTTA+AGG - chr7_1:72349172-72349191 None:intergenic 25.0%
!! TTGTGGTCTTGAAATAAAAA+GGG + chr7_1:72349337-72349356 Msa1036190:intron 25.0%
!!! GAGAGAATACTTATTTTGAT+TGG + chr7_1:72349655-72349674 Msa1036190:intron 25.0%
! ATGAAATTACTTCAAGTGAA+AGG + chr7_1:72349924-72349943 Msa1036190:intron 25.0%
!! TATGAACGAGATTATTCTTT+TGG - chr7_1:72349963-72349982 None:intergenic 25.0%
! GATAACACATCTCATATATA+AGG + chr7_1:72350138-72350157 Msa1036190:intron 25.0%
!!! AAGGTCCACTTTTTTTTTTA+AGG + chr7_1:72350157-72350176 Msa1036190:intron 25.0%
!!! GATAATCGTTTTAAAGTAGA+TGG - chr7_1:72350286-72350305 None:intergenic 25.0%
!! TAATTATAGGTGTTCTAGAT+TGG - chr7_1:72350381-72350400 None:intergenic 25.0%
!! ATCTAGAACACCTATAATTA+TGG + chr7_1:72350381-72350400 Msa1036190:intron 25.0%
! TAACATTGAGTTTATACACT+TGG - chr7_1:72350415-72350434 None:intergenic 25.0%
!!! TACTTCTAAAATACCACTTT+TGG + chr7_1:72350462-72350481 Msa1036190:intron 25.0%
! AAAATAAGTCACAAGAATAG+TGG - chr7_1:72350566-72350585 None:intergenic 25.0%
!!! TGCATTTTTGGATCTAAAAA+TGG + chr7_1:72350874-72350893 Msa1036190:intron 25.0%
!!! GCATTTTTGGATCTAAAAAT+GGG + chr7_1:72350875-72350894 Msa1036190:intron 25.0%
!! AAGTGATTTGTCTATTGTTA+TGG - chr7_1:72351251-72351270 None:intergenic 25.0%
!! TCACATTTTCCATTTCTTAA+AGG + chr7_1:72351442-72351461 Msa1036190:intron 25.0%
!! TTTGAATTTTTGATGTTGCA+AGG - chr7_1:72351769-72351788 None:intergenic 25.0%
!! TGATCATCAAACAACATTTT+GGG - chr7_1:72351796-72351815 None:intergenic 25.0%
!! NTGATCATCAAACAACATTT+TGG - chr7_1:72351797-72351816 None:intergenic 25.0%
!! ATTTGGTTAACTAGTTTAAC+AGG - chr7_1:72352347-72352366 None:intergenic 25.0%
!!! ACTTTTAACGGCTTTAAATT+TGG - chr7_1:72352364-72352383 None:intergenic 25.0%
!! CTTAATTTACTATCAAGTTG+TGG - chr7_1:72352451-72352470 None:intergenic 25.0%
! CATTAACAATCATAACAAAG+TGG + chr7_1:72352471-72352490 Msa1036190:intron 25.0%
!! GCAATTGTGATAATTTTCTT+AGG + chr7_1:72352523-72352542 Msa1036190:intron 25.0%
!! TCATGGATCATGATATATTT+TGG + chr7_1:72352653-72352672 Msa1036190:three_prime_UTR 25.0%
!!! GTATTTTGTTTTGTGATTTG+TGG + chr7_1:72353013-72353032 Msa1036190:intron 25.0%
! TTAAATTAAACTTGCACGAA+TGG + chr7_1:72353263-72353282 Msa1036190:intron 25.0%
!! CAATTATTCAATTAGCCTAT+AGG - chr7_1:72353304-72353323 None:intergenic 25.0%
!! ATAGTTTTCACCTTACAAAT+CGG + chr7_1:72353452-72353471 Msa1036190:intron 25.0%
! CCAATAAAATTAAGGTGATT+CGG + chr7_1:72353529-72353548 Msa1036190:intron 25.0%
! AACGTGTACTTAATCAATTA+TGG + chr7_1:72353670-72353689 Msa1036190:intron 25.0%
!!! GTTAGTTTCTCCTTTTATAA+TGG + chr7_1:72353794-72353813 Msa1036190:intron 25.0%
! AGAGACTTAATAAAGTTAGT+TGG + chr7_1:72354105-72354124 Msa1036190:intron 25.0%
! GAGACTTAATAAAGTTAGTT+GGG + chr7_1:72354106-72354125 Msa1036190:intron 25.0%
!!! GCATTTTGATCATTTACTTT+GGG - chr7_1:72354212-72354231 None:intergenic 25.0%
!!! TTTTCTAAGGCTTCAAATAT+TGG + chr7_1:72354405-72354424 Msa1036190:intron 25.0%
! TGAAAGAAAAAGTTGGAATA+TGG + chr7_1:72354778-72354797 Msa1036190:intron 25.0%
! GAAAGAAAAAGTTGGAATAT+GGG + chr7_1:72354779-72354798 Msa1036190:intron 25.0%
!!! ATGAGTTTGTTAGATAGTAT+TGG + chr7_1:72355124-72355143 Msa1036190:intron 25.0%
!!! TGAGTTTGTTAGATAGTATT+GGG + chr7_1:72355125-72355144 Msa1036190:intron 25.0%
! AAGTTATATGTGAAAAGAGA+GGG - chr7_1:72355222-72355241 None:intergenic 25.0%
! AAAGTTATATGTGAAAAGAG+AGG - chr7_1:72355223-72355242 None:intergenic 25.0%
! TACATAATATATGTGAGATC+CGG + chr7_1:72355804-72355823 Msa1036190:three_prime_UTR 25.0%
! GGAAAAACAAAATGATCAAT+AGG - chr7_1:72355895-72355914 None:intergenic 25.0%
!!! TTTTTTTGTGTGAAGGAGAA+GGG - chr7_1:72346518-72346537 None:intergenic 30.0%
!!! TTTTTTTTGTGTGAAGGAGA+AGG - chr7_1:72346519-72346538 None:intergenic 30.0%
!! AGATGAAGCATTGGAAATTA+GGG - chr7_1:72346582-72346601 None:intergenic 30.0%
!! AAGATGAAGCATTGGAAATT+AGG - chr7_1:72346583-72346602 None:intergenic 30.0%
GAGGATTAGATTCAATGAAA+TGG - chr7_1:72346633-72346652 None:intergenic 30.0%
TTTAGAAGAAGTGAAAGCAA+AGG - chr7_1:72346694-72346713 None:intergenic 30.0%
ATTCGCGAACTAAAATTTGA+GGG - chr7_1:72346790-72346809 None:intergenic 30.0%
AATTCGCGAACTAAAATTTG+AGG - chr7_1:72346791-72346810 None:intergenic 30.0%
CTAAATACTCTTCTTTCACT+GGG - chr7_1:72346836-72346855 None:intergenic 30.0%
TCTAAATACTCTTCTTTCAC+TGG - chr7_1:72346837-72346856 None:intergenic 30.0%
TCATCATCGATATATGAAAG+AGG + chr7_1:72346873-72346892 Msa1036190:CDS 30.0%
TCAAATGTCTTTGTGAGAAA+TGG - chr7_1:72346966-72346985 None:intergenic 30.0%
! TTGTTGTGTTTGAAGTATCT+AGG - chr7_1:72347089-72347108 None:intergenic 30.0%
GATGAGAAGAATACTTACAT+AGG - chr7_1:72347141-72347160 None:intergenic 30.0%
! CTTATTGTTTCCTGGATTTT+TGG + chr7_1:72347672-72347691 Msa1036190:intron 30.0%
CATCTTAGTTCAACATCAAA+TGG - chr7_1:72347724-72347743 None:intergenic 30.0%
TACCATTATACCATTACCTA+TGG + chr7_1:72347788-72347807 Msa1036190:intron 30.0%
! AACCATAGGTAATGGTATAA+TGG - chr7_1:72347793-72347812 None:intergenic 30.0%
TGACAAACAAGTGTTAATGA+TGG + chr7_1:72348100-72348119 Msa1036190:CDS 30.0%
! CATTTGTTGCTGCTTAATTT+CGG - chr7_1:72348201-72348220 None:intergenic 30.0%
AATTAAGCAGCAACAAATGA+TGG + chr7_1:72348202-72348221 Msa1036190:CDS 30.0%
AGTAATTGCTGAATAAAAGC+TGG - chr7_1:72348254-72348273 None:intergenic 30.0%
AAGATGCTATTACTAAGAAG+AGG + chr7_1:72348303-72348322 Msa1036190:CDS 30.0%
!! ATGATGGACTGATTAAGATT+CGG + chr7_1:72348684-72348703 Msa1036190:three_prime_UTR 30.0%
! ATATGTCCTTTTGTAGTAAC+AGG + chr7_1:72348828-72348847 Msa1036190:three_prime_UTR 30.0%
TGTATGTTTGGTATACCAAT+GGG + chr7_1:72348856-72348875 Msa1036190:three_prime_UTR 30.0%
! TTCTCTCTTATTGATTAGGT+AGG + chr7_1:72348961-72348980 Msa1036190:three_prime_UTR 30.0%
ATGATTCAGAAGATGTAGAA+TGG + chr7_1:72349184-72349203 Msa1036190:three_prime_UTR 30.0%
GAAAAAATATCAAACCGACA+AGG - chr7_1:72349280-72349299 None:intergenic 30.0%
! TTGTTTGTACTTTTGTCTTG+TGG + chr7_1:72349320-72349339 Msa1036190:intron 30.0%
! CTTGTGGTCTTGAAATAAAA+AGG + chr7_1:72349336-72349355 Msa1036190:intron 30.0%
AAATAAAAAGGGAAAGAGAG+AGG + chr7_1:72349348-72349367 Msa1036190:intron 30.0%
AACATCATGAAATTCGTTGA+TGG - chr7_1:72349377-72349396 None:intergenic 30.0%
! TACATATGTAGTGTTTTGCT+AGG + chr7_1:72349396-72349415 Msa1036190:intron 30.0%
CATGTTTCTCACATAGATTA+AGG + chr7_1:72349725-72349744 Msa1036190:intron 30.0%
ATATGACAATAGATGACAAG+TGG - chr7_1:72350196-72350215 None:intergenic 30.0%
AAGACCGACAAAATAAATCA+TGG - chr7_1:72350247-72350266 None:intergenic 30.0%
GGTTTCTACACCATAATTAT+AGG - chr7_1:72350394-72350413 None:intergenic 30.0%
! AATAGTGGTGGAGAAAATAT+AGG - chr7_1:72350551-72350570 None:intergenic 30.0%
ATCTGATTACATAGCAGATT+GGG - chr7_1:72351028-72351047 None:intergenic 30.0%
! CTATGTAATCAGATCCATTT+TGG + chr7_1:72351034-72351053 Msa1036190:intron 30.0%
ATCAAAATGGATGTCCAAAA+TGG - chr7_1:72351051-72351070 None:intergenic 30.0%
! AGTTTATTAATGGGAGCATA+AGG + chr7_1:72351077-72351096 Msa1036190:intron 30.0%
! GTTTATTAATGGGAGCATAA+GGG + chr7_1:72351078-72351097 Msa1036190:intron 30.0%
! TTTATTAATGGGAGCATAAG+GGG + chr7_1:72351079-72351098 Msa1036190:intron 30.0%
CAACATCAAAATAGTGACTT+GGG - chr7_1:72351227-72351246 None:intergenic 30.0%
ACAACATCAAAATAGTGACT+TGG - chr7_1:72351228-72351247 None:intergenic 30.0%
! TCCTTTTGCAAATGTGATAT+GGG - chr7_1:72351403-72351422 None:intergenic 30.0%
! CATTCTTTGCCTTTAAGAAA+TGG - chr7_1:72351454-72351473 None:intergenic 30.0%
ACTAAGACTTGAATGTTAGA+TGG + chr7_1:72351477-72351496 Msa1036190:intron 30.0%
!!! GATCTAACTGTGGATTTTTT+TGG + chr7_1:72351567-72351586 Msa1036190:intron 30.0%
ATTGTTCATGAAGTGAAACT+CGG + chr7_1:72351729-72351748 Msa1036190:intron 30.0%
! ATCATCAAACAACATTTTGG+GGG - chr7_1:72351794-72351813 None:intergenic 30.0%
! GATCATCAAACAACATTTTG+GGG - chr7_1:72351795-72351814 None:intergenic 30.0%
AATGATAGCATTGCATTGTT+TGG + chr7_1:72352088-72352107 Msa1036190:intron 30.0%
AAAGATAGAGAGAGATAGAT+GGG - chr7_1:72352123-72352142 None:intergenic 30.0%
! ATGTTTTGTAATGTTGTTGG+AGG - chr7_1:72352221-72352240 None:intergenic 30.0%
! CAAGTGATCAGAACTTTTAA+CGG - chr7_1:72352376-72352395 None:intergenic 30.0%
TTTACAAAAGAGATCTAAGC+TGG + chr7_1:72352415-72352434 Msa1036190:intron 30.0%
AGATCTAAGCTGGTTAATTT+AGG + chr7_1:72352425-72352444 Msa1036190:intron 30.0%
TCATAACAAAGTGGGAAATA+TGG + chr7_1:72352480-72352499 Msa1036190:intron 30.0%
GACAACAAAATTTCCAGAAA+TGG - chr7_1:72352635-72352654 None:intergenic 30.0%
!! TTCTGGAAATTTTGTTGTCA+TGG + chr7_1:72352636-72352655 Msa1036190:three_prime_UTR 30.0%
CACAGTAAGATCATAATCAT+AGG + chr7_1:72352702-72352721 Msa1036190:intron 30.0%
ACTATTACAAAGACAAACCT+TGG + chr7_1:72352763-72352782 Msa1036190:intron 30.0%
TCTTGAAGATATAAGTGACT+CGG - chr7_1:72352899-72352918 None:intergenic 30.0%
GGTATGAATGTATGATCTAT+AGG + chr7_1:72353034-72353053 Msa1036190:intron 30.0%
CTTGTAAATTCCACTATTTC+TGG - chr7_1:72353129-72353148 None:intergenic 30.0%
TTAGCTAAGTTATGCACATT+TGG - chr7_1:72353218-72353237 None:intergenic 30.0%
! ATATTGGCTGATAATCCTAT+AGG + chr7_1:72353286-72353305 Msa1036190:intron 30.0%
GGCTAATTGAATAATTGTGA+TGG + chr7_1:72353307-72353326 Msa1036190:intron 30.0%
! CCGAATCACCTTAATTTTAT+TGG - chr7_1:72353532-72353551 None:intergenic 30.0%
AATCACTCAAGTACACAATA+AGG - chr7_1:72353636-72353655 None:intergenic 30.0%
GTTAATTTCACTTGAGCATT+TGG + chr7_1:72353696-72353715 Msa1036190:intron 30.0%
!!! TTTCTCCTTTTATAATGGGT+TGG + chr7_1:72353799-72353818 Msa1036190:intron 30.0%
!!! TTCTCCTTTTATAATGGGTT+GGG + chr7_1:72353800-72353819 Msa1036190:intron 30.0%
! AGCTTTTCTCTCTATTGTTT+TGG - chr7_1:72354012-72354031 None:intergenic 30.0%
!! GGCATTTTGATCATTTACTT+TGG - chr7_1:72354213-72354232 None:intergenic 30.0%
TAGAAAAAGACAACAGGAAA+GGG - chr7_1:72354392-72354411 None:intergenic 30.0%
TTAGAAAAAGACAACAGGAA+AGG - chr7_1:72354393-72354412 None:intergenic 30.0%
! TTTCCTGTTGTCTTTTTCTA+AGG + chr7_1:72354392-72354411 Msa1036190:intron 30.0%
ATTGAACAGCAAAATTGCTA+AGG + chr7_1:72354430-72354449 Msa1036190:intron 30.0%
!! CTCTTTTTCGTCCTTTTATA+AGG + chr7_1:72354453-72354472 Msa1036190:intron 30.0%
!! TGTTTGGTGATTTTTGCAAT+TGG + chr7_1:72354596-72354615 Msa1036190:intron 30.0%
CTATCTAACAAACTCATGTT+CGG - chr7_1:72355121-72355140 None:intergenic 30.0%
ATGAAAACTACTTGGCTATT+GGG - chr7_1:72355315-72355334 None:intergenic 30.0%
AATGAAAACTACTTGGCTAT+TGG - chr7_1:72355316-72355335 None:intergenic 30.0%
TCAGCAATCTTCACATTAAT+TGG - chr7_1:72355375-72355394 None:intergenic 30.0%
! TGTAGACCTTACAAGTTTTA+CGG + chr7_1:72355724-72355743 Msa1036190:three_prime_UTR 30.0%
AATACACCGTAAAACTTGTA+AGG - chr7_1:72355733-72355752 None:intergenic 30.0%
ACATAATATATGTGAGATCC+GGG + chr7_1:72355805-72355824 Msa1036190:three_prime_UTR 30.0%
CTAAAGAGGAAATGTTGTGA+GGG - chr7_1:72346392-72346411 None:intergenic 35.0%
TCGTTAATAAGGCAGTTGAA+AGG - chr7_1:72346464-72346483 None:intergenic 35.0%
! AAATGGTGATGAGTGTAAGA+AGG - chr7_1:72346616-72346635 None:intergenic 35.0%
! TTCATATATCGATGATGACG+AGG - chr7_1:72346871-72346890 None:intergenic 35.0%
ATATGAAAGAGGAAGTGATG+AGG + chr7_1:72346884-72346903 Msa1036190:CDS 35.0%
TATGAAAGAGGAAGTGATGA+GGG + chr7_1:72346885-72346904 Msa1036190:CDS 35.0%
AATGTCTTTGTGAGAAATGG+TGG - chr7_1:72346963-72346982 None:intergenic 35.0%
CACAAAGACATTTGATGTTG+TGG + chr7_1:72346971-72346990 Msa1036190:CDS 35.0%
AAAGACATTTGATGTTGTGG+AGG + chr7_1:72346974-72346993 Msa1036190:CDS 35.0%
!! AAACTATGTGACTTGTTGTG+GGG - chr7_1:72347001-72347020 None:intergenic 35.0%
!! GAAACTATGTGACTTGTTGT+GGG - chr7_1:72347002-72347021 None:intergenic 35.0%
!! TGAAACTATGTGACTTGTTG+TGG - chr7_1:72347003-72347022 None:intergenic 35.0%
CAACAAGTCACATAGTTTCA+TGG + chr7_1:72347003-72347022 Msa1036190:CDS 35.0%
! GTTTGAAGTATCTAGGAAGA+AGG - chr7_1:72347082-72347101 None:intergenic 35.0%
!!! TTTCCTGGATTTTTGGTTTC+TGG + chr7_1:72347679-72347698 Msa1036190:intron 35.0%
AATCCAGAAACCAAAAATCC+AGG - chr7_1:72347685-72347704 None:intergenic 35.0%
ATTGCTTCAACCATAGGTAA+TGG - chr7_1:72347801-72347820 None:intergenic 35.0%
TTTGCAAACTCCCATTTATC+AGG - chr7_1:72347924-72347943 None:intergenic 35.0%
AAATGGGAGTTTGCAAATGA+AGG + chr7_1:72347927-72347946 Msa1036190:CDS 35.0%
GCAAATGAAGGATTTCTAAG+AGG + chr7_1:72347939-72347958 Msa1036190:CDS 35.0%
! GATTGTTGTTGTGAAGTACT+AGG - chr7_1:72348014-72348033 None:intergenic 35.0%
TCACAACAACAATCATCACA+AGG + chr7_1:72348020-72348039 Msa1036190:CDS 35.0%
AAGATCCATTCTTCAAGCAA+TGG + chr7_1:72348157-72348176 Msa1036190:CDS 35.0%
!!! GCAACAAATGATGGCTTTTT+TGG + chr7_1:72348211-72348230 Msa1036190:CDS 35.0%
TCAGCAATTACTTCAACAGA+AGG + chr7_1:72348262-72348281 Msa1036190:CDS 35.0%
TCAACAGAAGGAAAAGAGAA+AGG + chr7_1:72348274-72348293 Msa1036190:CDS 35.0%
CTATTACTAAGAAGAGGAGA+AGG + chr7_1:72348309-72348328 Msa1036190:CDS 35.0%
CTTGATTCTCCATACTCAAT+TGG - chr7_1:72348335-72348354 None:intergenic 35.0%
GAGTATGGAGAATCAAGTAA+TGG + chr7_1:72348338-72348357 Msa1036190:CDS 35.0%
TATGGAGAATCAAGTAATGG+TGG + chr7_1:72348341-72348360 Msa1036190:CDS 35.0%
! AAGAACTTGATGAAGGGTTT+TGG + chr7_1:72348504-72348523 Msa1036190:CDS 35.0%
! AGAACTTGATGAAGGGTTTT+GGG + chr7_1:72348505-72348524 Msa1036190:CDS 35.0%
GATTAACCTTCTTCGTATGA+TGG + chr7_1:72348668-72348687 Msa1036190:three_prime_UTR 35.0%
ACTACCAAGCAAAAAATCTG+TGG + chr7_1:72348768-72348787 Msa1036190:three_prime_UTR 35.0%
!!! GTTTCCACAGATTTTTTGCT+TGG - chr7_1:72348775-72348794 None:intergenic 35.0%
ACTTGACCTGTTACTACAAA+AGG - chr7_1:72348837-72348856 None:intergenic 35.0%
TAACAGGTCAAGTGTATGTT+TGG + chr7_1:72348844-72348863 Msa1036190:three_prime_UTR 35.0%
GTGTATGTTTGGTATACCAA+TGG + chr7_1:72348855-72348874 Msa1036190:three_prime_UTR 35.0%
!!! TTTTTGAGTGAAGATCCTGT+TGG + chr7_1:72349247-72349266 Msa1036190:three_prime_UTR 35.0%
CTATGTTCTTGAGAAATGAG+TGG + chr7_1:72349501-72349520 Msa1036190:intron 35.0%
ATTCTTCCTCAGTGTGAAAA+AGG - chr7_1:72349576-72349595 None:intergenic 35.0%
!!! TTCGTCCACTTTTTCATTTG+AGG + chr7_1:72349800-72349819 Msa1036190:intron 35.0%
CACAACCTCAAATGAAAAAG+TGG - chr7_1:72349808-72349827 None:intergenic 35.0%
! TCATTTGAGGTTGTGTCTAA+CGG + chr7_1:72349813-72349832 Msa1036190:intron 35.0%
TCTCGTTCATATTCTCTTCA+AGG + chr7_1:72349972-72349991 Msa1036190:intron 35.0%
!!! GATTTATTTTGTCGGTCTTG+AGG + chr7_1:72350248-72350267 Msa1036190:intron 35.0%
TCAAACATAGAGGCTTAACT+TGG - chr7_1:72350356-72350375 None:intergenic 35.0%
TAGATTGGACTCAAACATAG+AGG - chr7_1:72350366-72350385 None:intergenic 35.0%
ATAAGTCACAAGAATAGTGG+TGG - chr7_1:72350563-72350582 None:intergenic 35.0%
AGTAAGCGCAAATTCAATAG+TGG + chr7_1:72350818-72350837 Msa1036190:intron 35.0%
! AAATGGAGCAACTGCATTTT+TGG + chr7_1:72350862-72350881 Msa1036190:intron 35.0%
GATCTGATTACATAGCAGAT+TGG - chr7_1:72351029-72351048 None:intergenic 35.0%
! CACTTTGAAAGCAAGACAAA+GGG + chr7_1:72351139-72351158 Msa1036190:intron 35.0%
CAAAGGGTTAGAACACTAAA+AGG + chr7_1:72351155-72351174 Msa1036190:intron 35.0%
CATATCAATGCCATTGAACA+TGG - chr7_1:72351358-72351377 None:intergenic 35.0%
! CCTTTTGCAAATGTGATATG+GGG - chr7_1:72351402-72351421 None:intergenic 35.0%
! GTCCTTTTGCAAATGTGATA+TGG - chr7_1:72351404-72351423 None:intergenic 35.0%
AGAATGCAATATGAGACTTG+TGG - chr7_1:72351515-72351534 None:intergenic 35.0%
ATGCTCAAATCATGCAATTC+TGG - chr7_1:72351703-72351722 None:intergenic 35.0%
! TCATCAAACAACATTTTGGG+GGG - chr7_1:72351793-72351812 None:intergenic 35.0%
AAGATAGAGAGAGATAGATG+GGG - chr7_1:72352122-72352141 None:intergenic 35.0%
CAAAGATAGAGAGAGATAGA+TGG - chr7_1:72352124-72352143 None:intergenic 35.0%
! CGTTTTATAGTCATGTGTGT+TGG - chr7_1:72352295-72352314 None:intergenic 35.0%
ACAAAGTGGGAAATATGGAT+TGG + chr7_1:72352485-72352504 Msa1036190:intron 35.0%
GTATCAGAGTATGTTGAACA+TGG + chr7_1:72352601-72352620 Msa1036190:intron 35.0%
CTTACTGTGAAATCAATTCC+AGG - chr7_1:72352691-72352710 None:intergenic 35.0%
CTTGAAGATATAAGTGACTC+GGG - chr7_1:72352898-72352917 None:intergenic 35.0%
AAATGTGGTACACTCTTTGA+AGG + chr7_1:72353073-72353092 Msa1036190:three_prime_UTR 35.0%
AATGTGGTACACTCTTTGAA+GGG + chr7_1:72353074-72353093 Msa1036190:three_prime_UTR 35.0%
GAGTTAAAAGCCAGAAATAG+TGG + chr7_1:72353116-72353135 Msa1036190:three_prime_UTR 35.0%
! AGTTATGCACATTTGGAATG+TGG - chr7_1:72353211-72353230 None:intergenic 35.0%
GTGCATAACTTAGCTAAAGA+TGG + chr7_1:72353221-72353240 Msa1036190:three_prime_UTR 35.0%
AAACTTGCACGAATGGATAT+TGG + chr7_1:72353270-72353289 Msa1036190:intron 35.0%
!! TCATACAACACCGATTTGTA+AGG - chr7_1:72353465-72353484 None:intergenic 35.0%
!!! TCTCCTTTTATAATGGGTTG+GGG + chr7_1:72353801-72353820 Msa1036190:intron 35.0%
TAACACTAGCGTGAGTTTAA+GGG - chr7_1:72354234-72354253 None:intergenic 35.0%
TTAACACTAGCGTGAGTTTA+AGG - chr7_1:72354235-72354254 None:intergenic 35.0%
AAGCCTTAGAAAAAGACAAC+AGG - chr7_1:72354398-72354417 None:intergenic 35.0%
ATTTCCAAAAGTCCATTCGT+TGG + chr7_1:72354542-72354561 Msa1036190:intron 35.0%
TTTCCAAAAGTCCATTCGTT+GGG + chr7_1:72354543-72354562 Msa1036190:intron 35.0%
TTGATTAATCTCCCAACGAA+TGG - chr7_1:72354557-72354576 None:intergenic 35.0%
AGTTAAGGGAAAGATGCAAT+TGG + chr7_1:72354703-72354722 Msa1036190:intron 35.0%
!! ATTTTGTGCAGCTTTGATTC+TGG + chr7_1:72354750-72354769 Msa1036190:intron 35.0%
GGTTCAGTGAAAGAAAAAGT+TGG + chr7_1:72354771-72354790 Msa1036190:intron 35.0%
AACGTGACTTAAGTCAAGTA+AGG + chr7_1:72354853-72354872 Msa1036190:intron 35.0%
ACGTGACTTAAGTCAAGTAA+GGG + chr7_1:72354854-72354873 Msa1036190:intron 35.0%
CTTGTATGCAACATGGTAAT+GGG - chr7_1:72355171-72355190 None:intergenic 35.0%
ACTTGTATGCAACATGGTAA+TGG - chr7_1:72355172-72355191 None:intergenic 35.0%
! GAGAGGGAATGTATGAATTT+TGG - chr7_1:72355206-72355225 None:intergenic 35.0%
TGAAAACTACTTGGCTATTG+GGG - chr7_1:72355314-72355333 None:intergenic 35.0%
AATTCCATGATCACTAGCAA+GGG - chr7_1:72355484-72355503 None:intergenic 35.0%
! GTAAAAGACAACACGTTTTC+TGG - chr7_1:72355610-72355629 None:intergenic 35.0%
! TGTTGTCTTTTACACACTCT+TGG + chr7_1:72355617-72355636 Msa1036190:three_prime_UTR 35.0%
AAACTTGTAAGGTCTACACT+CGG - chr7_1:72355722-72355741 None:intergenic 35.0%
!! TTCCTCTGTTTGAGTTCTTT+TGG + chr7_1:72355957-72355976 Msa1036190:three_prime_UTR 35.0%
GCTAAAGAGGAAATGTTGTG+AGG - chr7_1:72346393-72346412 None:intergenic 40.0%
! GATCAACGGTTGTTATTCCA+CGG + chr7_1:72346907-72346926 Msa1036190:CDS 40.0%
ATAGTTTCATGGAGCAGAAG+TGG + chr7_1:72347014-72347033 Msa1036190:CDS 40.0%
!! TGGTGCTAGCTTTGTTGTTT+GGG + chr7_1:72347034-72347053 Msa1036190:CDS 40.0%
! CGTCTTGTCTTATTGTTTCC+TGG + chr7_1:72347664-72347683 Msa1036190:intron 40.0%
AGTTCAACATCAAATGGAGC+AGG - chr7_1:72347718-72347737 None:intergenic 40.0%
TGTGCAATTGCTTCAACCAT+AGG - chr7_1:72347807-72347826 None:intergenic 40.0%
CAAGGTCATTGTGTTGAAGT+TGG + chr7_1:72348038-72348057 Msa1036190:CDS 40.0%
!! TGTGTTGAAGTTGGTCGTTT+TGG + chr7_1:72348047-72348066 Msa1036190:CDS 40.0%
ATCCATTCTTCAAGCAATGG+AGG + chr7_1:72348160-72348179 Msa1036190:CDS 40.0%
TTCCTCCATTGCTTGAAGAA+TGG - chr7_1:72348165-72348184 None:intergenic 40.0%
TTCTTCAAGCAATGGAGGAA+AGG + chr7_1:72348165-72348184 Msa1036190:CDS 40.0%
! GAATCAAGTAATGGTGGTGA+TGG + chr7_1:72348347-72348366 Msa1036190:CDS 40.0%
! TGGATTTGAAGTGTCAGAGT+TGG + chr7_1:72348388-72348407 Msa1036190:CDS 40.0%
AATGTGTTGTCCAATCGCTT+TGG + chr7_1:72348605-72348624 Msa1036190:CDS 40.0%
TCCAATCGCTTTGGTTACTT+AGG + chr7_1:72348614-72348633 Msa1036190:CDS 40.0%
ACCTAAGTAACCAAAGCGAT+TGG - chr7_1:72348618-72348637 None:intergenic 40.0%
ATCAGTCCATCATACGAAGA+AGG - chr7_1:72348677-72348696 None:intergenic 40.0%
GATTCGGACTCAAAATCGAT+CGG + chr7_1:72348700-72348719 Msa1036190:three_prime_UTR 40.0%
TGTTTGGTATACCAATGGGT+TGG + chr7_1:72348860-72348879 Msa1036190:three_prime_UTR 40.0%
TGTAATTTCGACCAACCCAT+TGG - chr7_1:72348874-72348893 None:intergenic 40.0%
TTGAAATTTGAGCGCATGTC+TGG - chr7_1:72348931-72348950 None:intergenic 40.0%
! TAGGTTTTGCAGCTGTTGAT+TGG + chr7_1:72348980-72348999 Msa1036190:three_prime_UTR 40.0%
TCATCTCTATCAACTACCAG+AGG - chr7_1:72349013-72349032 None:intergenic 40.0%
AAGAGGCAAAGACCATATCT+TGG - chr7_1:72349128-72349147 None:intergenic 40.0%
!! TTCACTCCTTTTTCACACTG+AGG + chr7_1:72349567-72349586 Msa1036190:intron 40.0%
CACACTGAGGAAGAATAGAT+AGG + chr7_1:72349580-72349599 Msa1036190:intron 40.0%
ACTGAGGAAGAATAGATAGG+AGG + chr7_1:72349583-72349602 Msa1036190:intron 40.0%
! CATTTGAGGTTGTGTCTAAC+GGG + chr7_1:72349814-72349833 Msa1036190:intron 40.0%
GATGAGGTGACAATCAATTG+TGG - chr7_1:72350775-72350794 None:intergenic 40.0%
! GCACTTTGAAAGCAAGACAA+AGG + chr7_1:72351138-72351157 Msa1036190:intron 40.0%
! CAAAATAGTGACTTGGGCTT+TGG - chr7_1:72351221-72351240 None:intergenic 40.0%
!! CGAAATGACGTCGTTTTCAA+AGG - chr7_1:72351283-72351302 None:intergenic 40.0%
!! TTGCTACTTCTTGGTGTTTG+TGG - chr7_1:72351312-72351331 None:intergenic 40.0%
!! TGATATGGCTTGCTACTTCT+TGG - chr7_1:72351321-72351340 None:intergenic 40.0%
AATGCCATTGAACATGGTTG+GGG - chr7_1:72351352-72351371 None:intergenic 40.0%
CAATGCCATTGAACATGGTT+GGG - chr7_1:72351353-72351372 None:intergenic 40.0%
TCAATGCCATTGAACATGGT+TGG - chr7_1:72351354-72351373 None:intergenic 40.0%
GGTAAGGAATGCACATGATT+AGG - chr7_1:72351381-72351400 None:intergenic 40.0%
TGCAAATGTGATATGGGGTA+AGG - chr7_1:72351397-72351416 None:intergenic 40.0%
CCCCATATCACATTTGCAAA+AGG + chr7_1:72351399-72351418 Msa1036190:intron 40.0%
TCAGAGTATGTTGAACATGG+CGG + chr7_1:72352604-72352623 Msa1036190:intron 40.0%
!!! TTTTGGAGTTCAGATCATCC+TGG + chr7_1:72352670-72352689 Msa1036190:three_prime_UTR 40.0%
!! TGGTTCAGTCTTGTTCTATG+AGG - chr7_1:72352812-72352831 None:intergenic 40.0%
! CTCCTTATTCTCTTTTGCTC+CGG + chr7_1:72352839-72352858 Msa1036190:intron 40.0%
AGAGAACAAGACTGAACCAT+TGG - chr7_1:72352866-72352885 None:intergenic 40.0%
ACATAGAAGGACACAGTTTC+TGG - chr7_1:72353179-72353198 None:intergenic 40.0%
GTGTCCTTCTATGTTCATGT+TGG + chr7_1:72353185-72353204 Msa1036190:three_prime_UTR 40.0%
!!! TGTTATTTTCAAAGGGGGTG+TGG + chr7_1:72353726-72353745 Msa1036190:intron 40.0%
!! GTTATTTTCAAAGGGGGTGT+GGG + chr7_1:72353727-72353746 Msa1036190:intron 40.0%
ATGCCCCAACCCATTATAAA+AGG - chr7_1:72353807-72353826 None:intergenic 40.0%
CAATTTGTCCCACAGTGATT+GGG - chr7_1:72354150-72354169 None:intergenic 40.0%
! TCTGCAATATTTGCTAGCAG+TGG - chr7_1:72354518-72354537 None:intergenic 40.0%
TGCAATTGGATCAGCAGAAT+AGG + chr7_1:72354610-72354629 Msa1036190:intron 40.0%
!! AATAGGTACTGTTGATAGCG+TGG + chr7_1:72354627-72354646 Msa1036190:intron 40.0%
CTAGTCTCTTGTGCAGTTAA+GGG + chr7_1:72354689-72354708 Msa1036190:intron 40.0%
CAATTGGATCAAGCAGTTGT+GGG + chr7_1:72354719-72354738 Msa1036190:intron 40.0%
AATTGGATCAAGCAGTTGTG+GGG + chr7_1:72354720-72354739 Msa1036190:intron 40.0%
AACGTGAGTTAACTCACGTT+GGG + chr7_1:72354814-72354833 Msa1036190:intron 40.0%
! GCAAAACCGTCTTTTCACTT+GGG + chr7_1:72354876-72354895 Msa1036190:intron 40.0%
CTCATTCCCAAGTGAAAAGA+CGG - chr7_1:72354885-72354904 None:intergenic 40.0%
! GGGCTTTTCATAGCATACAT+AGG - chr7_1:72355151-72355170 None:intergenic 40.0%
GCAAGAACTTGTATGCAACA+TGG - chr7_1:72355178-72355197 None:intergenic 40.0%
! TGCTGAGTTAAGAGAAGCAT+TGG + chr7_1:72355389-72355408 Msa1036190:three_prime_UTR 40.0%
GAATTCCATGATCACTAGCA+AGG - chr7_1:72355485-72355504 None:intergenic 40.0%
GAGTACAAGCTTATTGCAAG+TGG + chr7_1:72355656-72355675 Msa1036190:three_prime_UTR 40.0%
AGCCAAAAGAACTCAAACAG+AGG - chr7_1:72355962-72355981 None:intergenic 40.0%
GAAAAACAACAGAGTCGCAG+TGG - chr7_1:72346761-72346780 None:intergenic 45.0%
AGGAAGTGATGAGGGATCAA+CGG + chr7_1:72346893-72346912 Msa1036190:CDS 45.0%
GTCTTTGTGAGAAATGGTGG+TGG - chr7_1:72346960-72346979 None:intergenic 45.0%
!! GTGGTGCTAGCTTTGTTGTT+TGG + chr7_1:72347033-72347052 Msa1036190:CDS 45.0%
!! AGGTCTCTGGAGAAAGCATT+TGG - chr7_1:72347062-72347081 None:intergenic 45.0%
GTATCTAGGAAGAAGGTCTC+TGG - chr7_1:72347075-72347094 None:intergenic 45.0%
CAACATCAAATGGAGCAGGT+AGG - chr7_1:72347714-72347733 None:intergenic 45.0%
AGGAGAAGGCCAATTGAGTA+TGG + chr7_1:72348323-72348342 Msa1036190:CDS 45.0%
!! CAAGTAATGGTGGTGATGGA+AGG + chr7_1:72348351-72348370 Msa1036190:CDS 45.0%
GGAAGGAGCAGTGTTAGATA+TGG + chr7_1:72348368-72348387 Msa1036190:CDS 45.0%
AGTGTCAGAGTTGGAAATGC+TGG + chr7_1:72348397-72348416 Msa1036190:CDS 45.0%
! AGAGTTGGAAATGCTGGCTA+TGG + chr7_1:72348403-72348422 Msa1036190:CDS 45.0%
! AATGCTGGCTATGGAAATGC+AGG + chr7_1:72348412-72348431 Msa1036190:CDS 45.0%
! ATGCTGGCTATGGAAATGCA+GGG + chr7_1:72348413-72348432 Msa1036190:CDS 45.0%
AGAGCTTGAGGAAGAGATTG+AGG + chr7_1:72348454-72348473 Msa1036190:CDS 45.0%
GTTGATTGGACAAGAACCTC+TGG + chr7_1:72348994-72349013 Msa1036190:three_prime_UTR 45.0%
AGACCATATCTTGGCTGACA+TGG - chr7_1:72349119-72349138 None:intergenic 45.0%
TTGAGTGAAGATCCTGTTGG+TGG + chr7_1:72349250-72349269 Msa1036190:three_prime_UTR 45.0%
!! CTGTTGGTGGTTAACCTTGT+CGG + chr7_1:72349263-72349282 Msa1036190:three_prime_UTR 45.0%
ATGCGTCATGTTGGATGATG+AGG - chr7_1:72350791-72350810 None:intergenic 45.0%
! CTTTTGCTCATGCGTCATGT+TGG - chr7_1:72350800-72350819 None:intergenic 45.0%
!! TACTTCTTGGTGTTTGTGGC+TGG - chr7_1:72351308-72351327 None:intergenic 45.0%
GTTGGGGGAACACTTTGATA+TGG - chr7_1:72351336-72351355 None:intergenic 45.0%
ATGCCATTGAACATGGTTGG+GGG - chr7_1:72351351-72351370 None:intergenic 45.0%
GTTCATGAAGTGAAACTCGG+TGG + chr7_1:72351732-72351751 Msa1036190:intron 45.0%
!! CTCACAACATAGTGTCGCTT+TGG + chr7_1:72352031-72352050 Msa1036190:intron 45.0%
CTGACTCACTTGTATCTCCA+AGG - chr7_1:72352783-72352802 None:intergenic 45.0%
! AGAGAATAAGGAGGCTCTAG+TGG - chr7_1:72352832-72352851 None:intergenic 45.0%
CGGAGCAAAAGAGAATAAGG+AGG - chr7_1:72352841-72352860 None:intergenic 45.0%
GACCGGAGCAAAAGAGAATA+AGG - chr7_1:72352844-72352863 None:intergenic 45.0%
ACAAGACTGAACCATTGGAC+CGG - chr7_1:72352861-72352880 None:intergenic 45.0%
!! TGGTTCAGTCTTGTTCTCTG+AGG + chr7_1:72352867-72352886 Msa1036190:intron 45.0%
! AGATATAAGTGACTCGGGTC+AGG - chr7_1:72352893-72352912 None:intergenic 45.0%
! ACTCTTTGAAGGGAACGTCA+GGG + chr7_1:72353084-72353103 Msa1036190:three_prime_UTR 45.0%
!! ACAGTTTCTGGCGTAGAGAT+AGG - chr7_1:72353167-72353186 None:intergenic 45.0%
GTGGCCAACATGAACATAGA+AGG - chr7_1:72353192-72353211 None:intergenic 45.0%
TCTTCTAGCCCAATCACTGT+GGG + chr7_1:72354139-72354158 Msa1036190:intron 45.0%
GCAATTTGTCCCACAGTGAT+TGG - chr7_1:72354151-72354170 None:intergenic 45.0%
GGGAATGAGCAGAAACGTTT+GGG - chr7_1:72354192-72354211 None:intergenic 45.0%
TGGGAATGAGCAGAAACGTT+TGG - chr7_1:72354193-72354212 None:intergenic 45.0%
! AACAGGAAAGGGTATGAGAC+AGG - chr7_1:72354381-72354400 None:intergenic 45.0%
!! TCTCCCAACGAATGGACTTT+TGG - chr7_1:72354549-72354568 None:intergenic 45.0%
TCAGAAAGAACAGCTTGCAG+TGG + chr7_1:72354666-72354685 Msa1036190:intron 45.0%
! GCTAGTCTCTTGTGCAGTTA+AGG + chr7_1:72354688-72354707 Msa1036190:intron 45.0%
GCAATTGGATCAAGCAGTTG+TGG + chr7_1:72354718-72354737 Msa1036190:intron 45.0%
CAACGTGAGTTAACTCACGT+TGG - chr7_1:72354813-72354832 None:intergenic 45.0%
CAACGTGAGTTAACTCACGT+TGG + chr7_1:72354813-72354832 Msa1036190:intron 45.0%
! GGCAAAACCGTCTTTTCACT+TGG + chr7_1:72354875-72354894 Msa1036190:intron 45.0%
TGGGAATGAGCGAAACTGTT+TGG + chr7_1:72354895-72354914 Msa1036190:intron 45.0%
GGGAATGAGCGAAACTGTTT+GGG + chr7_1:72354896-72354915 Msa1036190:intron 45.0%
GAAACTGTTTGGGTAAGAGC+AGG + chr7_1:72354906-72354925 Msa1036190:intron 45.0%
TTCTCCCTTGCTAGTGATCA+TGG + chr7_1:72355477-72355496 Msa1036190:intron 45.0%
ACCAACTGAGCTAAGCTCAT+GGG - chr7_1:72355776-72355795 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+TGG - chr7_1:72355777-72355796 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG + chr7_1:72355777-72355796 Msa1036190:three_prime_UTR 45.0%
!! TTAAAATTAACAAATAATAA+GGG - chr7_1:72346720-72346739 None:intergenic 5.0%
!!! TTTAAAATTAACAAATAATA+AGG - chr7_1:72346721-72346740 None:intergenic 5.0%
!! ATAATATATAAAGAATTATT+AGG + chr7_1:72349458-72349477 Msa1036190:intron 5.0%
!! TAATATATAAAGAATTATTA+GGG + chr7_1:72349459-72349478 Msa1036190:intron 5.0%
!! TAAAAATAATAATAATAATG+AGG - chr7_1:72352728-72352747 None:intergenic 5.0%
! GGTTGTTATTCCACGGCCAA+TGG + chr7_1:72346914-72346933 Msa1036190:CDS 50.0%
TGTTATTCCACGGCCAATGG+AGG + chr7_1:72346917-72346936 Msa1036190:CDS 50.0%
GTTATTCCACGGCCAATGGA+GGG + chr7_1:72346918-72346937 Msa1036190:CDS 50.0%
TTATTCCACGGCCAATGGAG+GGG + chr7_1:72346919-72346938 Msa1036190:CDS 50.0%
ACTTCATGAAGCCCCTCCAT+TGG - chr7_1:72346933-72346952 None:intergenic 50.0%
ATGGAGGGGCTTCATGAAGT+AGG + chr7_1:72346933-72346952 Msa1036190:CDS 50.0%
CATCAAATGGAGCAGGTAGG+AGG - chr7_1:72347711-72347730 None:intergenic 50.0%
GCTATGGAAATGCAGGGTCT+TGG + chr7_1:72348419-72348438 Msa1036190:CDS 50.0%
GAAATGCAGGGTCTTGGAAG+AGG + chr7_1:72348425-72348444 Msa1036190:CDS 50.0%
! ACTAGTAGCGTGGTCTTGGT+TGG + chr7_1:72348725-72348744 Msa1036190:three_prime_UTR 50.0%
GTCTGGTATCGTGGTGAGTT+TGG - chr7_1:72348914-72348933 None:intergenic 50.0%
GCACCATGTCAGCCAAGATA+TGG + chr7_1:72349113-72349132 Msa1036190:intron 50.0%
CGACAAGGTTAACCACCAAC+AGG - chr7_1:72349265-72349284 None:intergenic 50.0%
!! GTGACTTGGGCTTTGGTTTG+TGG - chr7_1:72351214-72351233 None:intergenic 50.0%
GTTCCCCCAACCATGTTCAA+TGG + chr7_1:72351345-72351364 Msa1036190:intron 50.0%
! TCTCTTTTGCTCCGGTCCAA+TGG + chr7_1:72352847-72352866 Msa1036190:intron 50.0%
CTATAGGTGACATCTCCTGC+TGG + chr7_1:72353050-72353069 Msa1036190:intron 50.0%
GACATCTCCTGCTGGAAATG+TGG + chr7_1:72353058-72353077 Msa1036190:three_prime_UTR 50.0%
GAGTGTACCACATTTCCAGC+AGG - chr7_1:72353068-72353087 None:intergenic 50.0%
! CACTCTTTGAAGGGAACGTC+AGG + chr7_1:72353083-72353102 Msa1036190:three_prime_UTR 50.0%
! CTCTTTGAAGGGAACGTCAG+GGG + chr7_1:72353085-72353104 Msa1036190:three_prime_UTR 50.0%
! TTGGGCTAGAAGACTCGTCA+AGG - chr7_1:72354132-72354151 None:intergenic 50.0%
GTCTTCTAGCCCAATCACTG+TGG + chr7_1:72354138-72354157 Msa1036190:intron 50.0%
AGCGTGAGTTAACTCACGCT+GGG - chr7_1:72354317-72354336 None:intergenic 50.0%
! AGGAAAGGGTATGAGACAGG+AGG - chr7_1:72354378-72354397 None:intergenic 50.0%
CCAACTGAGCTAAGCTCATG+GGG - chr7_1:72355775-72355794 None:intergenic 50.0%
TGAGATCCGGGTTCAAACTC+CGG + chr7_1:72355817-72355836 Msa1036190:three_prime_UTR 50.0%
TTGTGACCGGAGTTTGAACC+CGG - chr7_1:72355826-72355845 None:intergenic 50.0%
GCAATGGAGGAAAGGCTACG+TGG + chr7_1:72348173-72348192 Msa1036190:CDS 55.0%
ATGCAGGGTCTTGGAAGAGG+TGG + chr7_1:72348428-72348447 Msa1036190:CDS 55.0%
!! AAGAGGTGGTGGAGAGCTTG+AGG + chr7_1:72348442-72348461 Msa1036190:CDS 55.0%
TCGATCGGACACTAGTAGCG+TGG + chr7_1:72348715-72348734 Msa1036190:three_prime_UTR 55.0%
GGACACTAGTAGCGTGGTCT+TGG + chr7_1:72348721-72348740 Msa1036190:three_prime_UTR 55.0%
! CGTGGTCTTGGTTGGCAACT+TGG + chr7_1:72348733-72348752 Msa1036190:three_prime_UTR 55.0%
TGAGCGCATGTCTGGTATCG+TGG - chr7_1:72348923-72348942 None:intergenic 55.0%
CATGGCGGTGACACCATTTC+TGG + chr7_1:72352619-72352638 Msa1036190:three_prime_UTR 55.0%
CAGCGTGAGTTAACTCACGC+TGG - chr7_1:72354316-72354335 None:intergenic 55.0%
CAGCGTGAGTTAACTCACGC+TGG + chr7_1:72354316-72354335 Msa1036190:intron 55.0%
GGATCAAGCAGTTGTGGGGA+AGG + chr7_1:72354724-72354743 Msa1036190:intron 55.0%
CCCCATGAGCTTAGCTCAGT+TGG + chr7_1:72355772-72355791 Msa1036190:three_prime_UTR 55.0%
CAGGGTCTTGGAAGAGGTGG+TGG + chr7_1:72348431-72348450 Msa1036190:CDS 60.0%
TGAAGCCCCTCCATTGGCCG+TGG - chr7_1:72346927-72346946 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 72346360 72355982 72346360 ID=Msa1036190;Name=Msa1036190
chr7_1 mRNA 72346360 72355982 72346360 ID=Msa1036190-mRNA-1;Parent=Msa1036190;Name=Msa1036190-mRNA-1;_AED=0.24;_eAED=0.24;_QI=459|1|1|1|0.5|0.28|7|1275|357
chr7_1 exon 72346360 72347142 72346360 ID=Msa1036190-mRNA-1:exon:17629;Parent=Msa1036190-mRNA-1
chr7_1 exon 72347903 72349045 72347903 ID=Msa1036190-mRNA-1:exon:17630;Parent=Msa1036190-mRNA-1
chr7_1 exon 72349184 72349284 72349184 ID=Msa1036190-mRNA-1:exon:17631;Parent=Msa1036190-mRNA-1
chr7_1 exon 72352608 72352705 72352608 ID=Msa1036190-mRNA-1:exon:17632;Parent=Msa1036190-mRNA-1
chr7_1 exon 72353056 72353242 72353056 ID=Msa1036190-mRNA-1:exon:17633;Parent=Msa1036190-mRNA-1
chr7_1 exon 72355361 72355468 72355361 ID=Msa1036190-mRNA-1:exon:17634;Parent=Msa1036190-mRNA-1
chr7_1 exon 72355595 72355982 72355595 ID=Msa1036190-mRNA-1:exon:17635;Parent=Msa1036190-mRNA-1
chr7_1 five_prime_UTR 72346360 72346818 72346360 ID=Msa1036190-mRNA-1:five_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 CDS 72346819 72347142 72346819 ID=Msa1036190-mRNA-1:cds;Parent=Msa1036190-mRNA-1
chr7_1 CDS 72347903 72348652 72347903 ID=Msa1036190-mRNA-1:cds;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72348653 72349045 72348653 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72349184 72349284 72349184 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72352608 72352705 72352608 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72353056 72353242 72353056 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72355361 72355468 72355361 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
chr7_1 three_prime_UTR 72355595 72355982 72355595 ID=Msa1036190-mRNA-1:three_prime_utr;Parent=Msa1036190-mRNA-1
Gene Sequence

>Msa1036190

ATGAACTATCTCTACCCAGTGAAAGAAGAGTATTTAGAAATTGAAGCAACCTCGTCATCATCGATATATGAAAGAGGAAGTGATGAGGGATCAACGGTTGTTATTCCACGGCCAATGGAGGGGCTTCATGAAGTAGGACCACCACCATTTCTCACAAAGACATTTGATGTTGTGGAGGACCCCACAACAAGTCACATAGTTTCATGGAGCAGAAGTGGTGCTAGCTTTGTTGTTTGGGATCCAAATGCTTTCTCCAGAGACCTTCTTCCTAGATACTTCAAACACAACAATTTCTCAAGTTTTGTTAGACAACTCAACACCTATGGTTTTAGAAAAATTGATCCTGATAAATGGGAGTTTGCAAATGAAGGATTTCTAAGAGGACATAAACATCTTTTAGCAAACATTAAGAGAAGGAGACAAACTTCACAACCTAGTACTTCACAACAACAATCATCACAAGGTCATTGTGTTGAAGTTGGTCGTTTTGGATTAGACGAAGAAATCGATCATTTGAGACGTGACAAACAAGTGTTAATGATGGAACTTGTGAAGCTTAGACAGCAACAGCAGAACACAAGATCCATTCTTCAAGCAATGGAGGAAAGGCTACGTGGAACCGAAATTAAGCAGCAACAAATGATGGCTTTTTTGGCTAGAGCTATGAAAAATCCAGCTTTTATTCAGCAATTACTTCAACAGAAGGAAAAGAGAAAGGAGATTGAAGATGCTATTACTAAGAAGAGGAGAAGGCCAATTGAGTATGGAGAATCAAGTAATGGTGGTGATGGAAGGAGCAGTGTTAGATATGGATTTGAAGTGTCAGAGTTGGAAATGCTGGCTATGGAAATGCAGGGTCTTGGAAGAGGTGGTGGAGAGCTTGAGGAAGAGATTGAGGTATTTGAGACTCATGAGAAAATGAATAAAGAACTTGATGAAGGGTTTTGGGAAGAACTTTTTAGTGAGAATTTTGAGAGTGAATTAGATATTCTAACTTCTCAAGATGATGATGATGATGAAGATGTCAATGTGTTGTCCAATCGCTTTGGTTACTTAGGTTCTAGTCCGAAATAA
Protein sequence

>Msa1036190

MNYLYPVKEEYLEIEATSSSSIYERGSDEGSTVVIPRPMEGLHEVGPPPFLTKTFDVVEDPTTSHIVSWSRSGASFVVWDPNAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFLRGHKHLLANIKRRRQTSQPSTSQQQSSQGHCVEVGRFGLDEEIDHLRRDKQVLMMELVKLRQQQQNTRSILQAMEERLRGTEIKQQQMMAFLARAMKNPAFIQQLLQQKEKRKEIEDAITKKRRRPIEYGESSNGGDGRSSVRYGFEVSELEMLAMEMQGLGRGGGELEEEIEVFETHEKMNKELDEGFWEELFSENFESELDILTSQDDDDDEDVNVLSNRFGYLGSSPK*