AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1118130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118130 MtrunA17_Chr7g0260331 96.399 361 9 2 1 357 1 361 0.0 707
Msa1118130 MtrunA17_Chr1g0204741 55.556 333 125 6 26 356 17 328 3.89e-117 342
Msa1118130 MtrunA17_Chr1g0185131 57.183 355 107 8 1 341 1 324 3.99e-115 338
Msa1118130 MtrunA17_Chr3g0135831 63.761 218 73 2 34 251 31 242 6.81e-96 290
Msa1118130 MtrunA17_Chr5g0410881 59.009 222 85 1 35 250 18 239 9.06e-88 273
Msa1118130 MtrunA17_Chr4g0039891 57.005 207 84 1 48 249 11 217 1.42e-77 246
Msa1118130 MtrunA17_Chr4g0071051 45.614 285 136 5 7 289 67 334 1.39e-73 234
Msa1118130 MtrunA17_Chr8g0379701 41.228 228 122 3 48 275 11 226 3.33e-53 180
Msa1118130 MtrunA17_Chr8g0392001 46.602 206 96 3 49 244 22 223 5.26e-53 179
Msa1118130 MtrunA17_Chr6g0485571 42.927 205 108 3 49 253 11 206 2.61e-52 176
Msa1118130 MtrunA17_Chr8g0378061 47.059 204 98 6 50 252 23 217 1.04e-49 173
Msa1118130 MtrunA17_Chr6g0467041 44.878 205 99 5 49 250 22 215 1.32e-49 169
Msa1118130 MtrunA17_Chr2g0284481 36.800 250 131 5 48 284 14 249 1.18e-46 162
Msa1118130 MtrunA17_Chr2g0330821 43.386 189 102 2 43 231 73 256 8.64e-46 160
Msa1118130 MtrunA17_Chr5g0402291 65.686 102 35 0 46 147 6 107 2.01e-44 154
Msa1118130 MtrunA17_Chr3g0134031 68.932 103 31 1 43 145 18 119 2.86e-44 156
Msa1118130 MtrunA17_Chr5g0397881 65.957 94 32 0 47 140 22 115 3.95e-42 150
Msa1118130 MtrunA17_Chr5g0441531 65.957 94 32 0 47 140 23 116 2.82e-40 142
Msa1118130 MtrunA17_Chr1g0203601 61.702 94 36 0 47 140 16 109 3.12e-40 144
Msa1118130 MtrunA17_Chr7g0257331 45.062 162 77 3 40 189 9 170 1.77e-39 140
Msa1118130 MtrunA17_Chr6g0472421 60.638 94 37 0 47 140 31 124 3.80e-39 142
Msa1118130 MtrunA17_Chr8g0375041 43.023 172 79 3 44 199 4 172 9.15e-38 136
Msa1118130 MtrunA17_Chr4g0047421 38.462 182 97 5 47 224 31 201 1.21e-32 121
Msa1118130 MtrunA17_Chr1g0179311 43.636 165 88 4 106 270 11 170 1.31e-30 119
Msa1118130 MtrunA17_Chr1g0179321 66.216 74 25 0 35 108 35 108 3.26e-30 111
Msa1118130 MtrunA17_Chr4g0023771 57.143 70 29 1 40 108 6 75 5.60e-21 87.0
Msa1118130 MtrunA17_Chr2g0330841 32.544 169 103 5 109 273 41 202 4.81e-19 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118130 AT3G22830.1 54.907 377 115 9 24 355 36 402 8.38e-128 372
Msa1118130 AT3G51910.1 55.439 285 88 6 39 322 19 265 7.26e-99 294
Msa1118130 AT2G26150.1 48.012 327 152 7 36 356 31 345 6.16e-94 284
Msa1118130 AT2G26150.4 48.012 327 152 7 36 356 31 345 6.16e-94 284
Msa1118130 AT3G63350.1 45.625 320 126 5 27 344 6 279 3.50e-86 262
Msa1118130 AT1G32330.2 55.645 248 93 5 18 250 4 249 2.54e-83 261
Msa1118130 AT1G32330.1 55.645 248 93 5 18 250 4 249 3.23e-83 261
Msa1118130 AT4G17750.1 48.551 276 115 5 26 280 23 292 1.59e-82 259
Msa1118130 AT5G16820.1 51.923 260 109 5 27 276 10 263 4.41e-81 255
Msa1118130 AT5G16820.2 51.923 260 109 5 27 276 10 263 4.41e-81 255
Msa1118130 AT3G02990.1 54.348 230 98 3 48 270 22 251 1.33e-79 251
Msa1118130 AT5G43840.1 45.652 276 118 6 35 297 5 261 1.23e-74 233
Msa1118130 AT5G03720.2 47.638 254 117 5 35 282 41 284 1.31e-68 221
Msa1118130 AT5G03720.1 47.638 254 117 5 35 282 41 284 1.31e-68 221
Msa1118130 AT1G67970.1 50.526 190 92 2 49 237 19 207 3.17e-60 198
Msa1118130 AT5G54070.1 41.262 206 108 3 42 244 63 258 1.17e-53 180
Msa1118130 AT3G24520.1 42.857 203 92 2 49 251 17 195 1.01e-50 172
Msa1118130 AT4G13980.1 43.478 207 102 4 50 252 24 219 6.15e-50 174
Msa1118130 AT2G26150.3 40.551 254 133 7 109 356 49 290 8.96e-47 161
Msa1118130 AT2G26150.2 40.551 254 133 7 109 356 49 290 8.96e-47 161
Msa1118130 AT4G18880.1 42.932 191 109 0 41 231 7 197 2.76e-44 157
Msa1118130 AT1G46264.1 61.864 118 44 1 39 156 24 140 3.45e-43 153
Msa1118130 AT5G45710.3 41.146 192 111 2 48 239 12 201 7.47e-43 152
Msa1118130 AT5G45710.1 41.146 192 111 2 48 239 12 201 7.47e-43 152
Msa1118130 AT4G11660.1 63.636 99 35 1 47 145 57 154 2.46e-40 146
Msa1118130 AT5G62020.1 50.769 130 60 1 47 172 21 150 6.83e-40 143
Msa1118130 AT4G36990.1 56.522 115 43 1 47 161 12 119 1.38e-39 142
Msa1118130 AT2G41690.1 62.766 94 35 0 47 140 38 131 2.71e-39 140
Msa1118130 AT4G18870.1 35.484 124 80 0 38 161 135 258 4.27e-24 100
Msa1118130 AT4G18870.1 48.315 89 41 2 50 136 14 99 1.48e-21 93.6

Find 163 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGTAAATTCCACTATTTC+TGG 0.082987 7_3:-66689763 None:intergenic
TCAGCAATCTTCACATTAAT+TGG 0.154501 7_3:-66692120 None:intergenic
TTTAAAATTAACAAATAATA+AGG 0.156314 7_3:-66683455 None:intergenic
AAGATGAAGCATTGGAAATT+AGG 0.171413 7_3:-66683317 None:intergenic
TCATGGATCATGATATATTT+TGG 0.171436 7_3:+66689289 Msa1118130:three_prime_UTR
GATATGTGAAAGAAGAAATT+TGG 0.214786 7_3:-66683289 None:intergenic
TTCCTCTGTTTGAGTTCTTT+TGG 0.238917 7_3:+66692700 Msa1118130:three_prime_UTR
CCCGGTGAAAGAAGAGTATT+TGG 0.239647 7_3:+66683567 Msa1118130:CDS
AAGAACTTGATGAAGGGTTT+TGG 0.252613 7_3:+66685237 Msa1118130:CDS
ACATAGAAGGACACAGTTTC+TGG 0.285692 7_3:-66689813 None:intergenic
TTTGCAAACTCCCATTTATC+AGG 0.290173 7_3:-66684654 None:intergenic
TGGTGCTAGCTTTGTTGTTT+GGG 0.299201 7_3:+66683768 Msa1118130:CDS
CATGGCGGTGACACCATTTC+TGG 0.299446 7_3:+66689255 Msa1118130:three_prime_UTR
CTTTAGCTTTCTTCAAATAT+AGG 0.303852 7_3:+66683157 Msa1118130:five_prime_UTR
CGATTAAGCGTAATTTATTT+CGG 0.307152 7_3:-66685377 None:intergenic
AATGAAAATGTTCATAATAA+AGG 0.320104 7_3:-66683391 None:intergenic
ATGTTTCTCTCTTATTGATT+AGG 0.325883 7_3:+66685690 Msa1118130:three_prime_UTR
TTAGCTAAGTTATGCACATT+TGG 0.329783 7_3:-66689852 None:intergenic
AGATGAAGCATTGGAAATTA+GGG 0.336133 7_3:-66683316 None:intergenic
GTGGTGCTAGCTTTGTTGTT+TGG 0.347357 7_3:+66683767 Msa1118130:CDS
TGTGTTGAAGTTGGTCGTTT+TGG 0.363566 7_3:+66684780 Msa1118130:CDS
CATTTGTTGCTGCTTAATTT+CGG 0.365368 7_3:-66684931 None:intergenic
AGGAGAAGGCCAATTGAGTA+TGG 0.367381 7_3:+66685056 Msa1118130:CDS
CTTGATTCTCCATACTCAAT+TGG 0.368141 7_3:-66685065 None:intergenic
CTGTTGGTGGTTAACCTTGT+CGG 0.372067 7_3:+66685998 Msa1118130:three_prime_UTR
GTCTGGTATCGTGGTGAGTT+TGG 0.376393 7_3:-66685644 None:intergenic
TTCCTCCATTGCTTGAAGAA+TGG 0.378113 7_3:-66684895 None:intergenic
ACAGTTTCTGGCGTAGAGAT+AGG 0.388624 7_3:-66689801 None:intergenic
TTGAAATTTGAGCGCATGTC+TGG 0.390961 7_3:-66685661 None:intergenic
TACATAATATATGTGAGATC+CGG 0.397301 7_3:+66692545 Msa1118130:three_prime_UTR
CAACAAGTCACATAGTTTCA+TGG 0.398902 7_3:+66683737 Msa1118130:CDS
CGTGGTCTTGGTTGGCAACT+TGG 0.405663 7_3:+66685466 Msa1118130:three_prime_UTR
CACAAAGACATTTGATGTTG+TGG 0.406218 7_3:+66683705 Msa1118130:CDS
GACAACAAAATTTCCAGAAA+TGG 0.407913 7_3:-66689268 None:intergenic
CACTCTTTGAAGGGAACGTC+AGG 0.413742 7_3:+66689720 Msa1118130:three_prime_UTR
TTAAAATTAACAAATAATAA+GGG 0.418523 7_3:-66683454 None:intergenic
GATTAACCTTCTTCGTATGA+TGG 0.421745 7_3:+66685401 Msa1118130:three_prime_UTR
TCCAAATACTCTTCTTTCAC+CGG 0.421749 7_3:-66683568 None:intergenic
AATACACCGTAAAACTTGTA+AGG 0.423937 7_3:-66692478 None:intergenic
TAACAGGTCAAGTGTATGTT+TGG 0.426297 7_3:+66685577 Msa1118130:three_prime_UTR
GAGGATTAGATTCAATGAAA+TGG 0.427774 7_3:-66683367 None:intergenic
AGAAATTTGGAAAGTCGTTA+AGG 0.435689 7_3:-66683218 None:intergenic
AAATGGGAGTTTGCAAATGA+AGG 0.436132 7_3:+66684660 Msa1118130:CDS
GCTATGGAAATGCAGGGTCT+TGG 0.436909 7_3:+66685152 Msa1118130:CDS
TCCAATCGCTTTGGTTACTT+AGG 0.437897 7_3:+66685347 Msa1118130:CDS
ACTTGACCTGTTACTACAAA+AGG 0.441272 7_3:-66685567 None:intergenic
TCAAATGTCTTTGTGAGAAA+TGG 0.443148 7_3:-66683697 None:intergenic
GGACACTAGTAGCGTGGTCT+TGG 0.446248 7_3:+66685454 Msa1118130:three_prime_UTR
AGGTCTCTGGAGAAAGCATT+TGG 0.449261 7_3:-66683793 None:intergenic
TGCTGAGTTAAGAGAAGCAT+TGG 0.450097 7_3:+66692137 Msa1118130:three_prime_UTR
TTGTTGTGTTTGAAGTATCT+AGG 0.454609 7_3:-66683820 None:intergenic
GGAAGGAGCAGTGTTAGATA+TGG 0.456890 7_3:+66685101 Msa1118130:CDS
AATTCACGACCTAAAATTTG+AGG 0.458383 7_3:-66683525 None:intergenic
ATGAATAAAGAACTTGATGA+AGG 0.466508 7_3:+66685230 Msa1118130:CDS
CTTACTGTGAAATCAATTCC+AGG 0.468002 7_3:-66689324 None:intergenic
AAGAGGTGGTGGAGAGCTTG+AGG 0.469597 7_3:+66685175 Msa1118130:CDS
CCCCATGAGCTTAGCTCAGT+TGG 0.470673 7_3:+66692513 Msa1118130:three_prime_UTR
GTATCTAGGAAGAAGGTCTC+TGG 0.470929 7_3:-66683806 None:intergenic
AGAGCTTGAGGAAGAGATTG+AGG 0.477721 7_3:+66685187 Msa1118130:CDS
AGTAATTGCTGAATAAAAGC+TGG 0.482397 7_3:-66684984 None:intergenic
ACATAATATATGTGAGATCC+GGG 0.488952 7_3:+66692546 Msa1118130:three_prime_UTR
CAAGGTCATTGTGTTGAAGT+TGG 0.497401 7_3:+66684771 Msa1118130:CDS
GTGTATGTTTGGTATACCAA+TGG 0.498293 7_3:+66685588 Msa1118130:three_prime_UTR
CGACAAGGTTAACCACCAAC+AGG 0.499241 7_3:-66685997 None:intergenic
ATTCACGACCTAAAATTTGA+GGG 0.500504 7_3:-66683524 None:intergenic
GTGGCCAACATGAACATAGA+AGG 0.501930 7_3:-66689826 None:intergenic
GTTATTCCACGGCCAATGGA+GGG 0.502097 7_3:+66683652 Msa1118130:CDS
GAGTTAAAAGCCAGAAATAG+TGG 0.502355 7_3:+66689753 Msa1118130:three_prime_UTR
GTGCATAACTTAGCTAAAGA+TGG 0.502933 7_3:+66689858 Msa1118130:three_prime_UTR
AAATGTGGTACACTCTTTGA+AGG 0.503212 7_3:+66689710 Msa1118130:three_prime_UTR
CAGGGTCTTGGAAGAGGTGG+TGG 0.504100 7_3:+66685164 Msa1118130:CDS
GGTTGTTATTCCACGGCCAA+TGG 0.506460 7_3:+66683648 Msa1118130:CDS
TGGATTTGAAGTGTCAGAGT+TGG 0.506828 7_3:+66685121 Msa1118130:CDS
GATTGTTGTTGTGAAGTACT+AGG 0.510219 7_3:-66684744 None:intergenic
AATTAAGCAGCAACAAATGA+TGG 0.512562 7_3:+66684935 Msa1118130:CDS
TGAGCTTAGCTCAGTTGGTA+AGG 0.513111 7_3:+66692518 Msa1118130:three_prime_UTR
ACCTAAGTAACCAAAGCGAT+TGG 0.517991 7_3:-66685348 None:intergenic
TGTAATTTCGACCAACCCAT+TGG 0.518053 7_3:-66685604 None:intergenic
GCAAATGAAGGATTTCTAAG+AGG 0.518927 7_3:+66684672 Msa1118130:CDS
CTATAGGTGACATCTCCTGC+TGG 0.519297 7_3:+66689687 Msa1118130:intron
ATGATGGACTGATTAAGATT+CGG 0.520744 7_3:+66685417 Msa1118130:three_prime_UTR
TGTTATTCCACGGCCAATGG+AGG 0.521139 7_3:+66683651 Msa1118130:CDS
AATGTGTTGTCCAATCGCTT+TGG 0.521879 7_3:+66685338 Msa1118130:CDS
ACTTCATGAAGCCCCTCCAT+TGG 0.523280 7_3:-66683664 None:intergenic
GTTTGAAGTATCTAGGAAGA+AGG 0.525332 7_3:-66683813 None:intergenic
TGAAGCCCCTCCATTGGCCG+TGG 0.526845 7_3:-66683658 None:intergenic
TCAGCAATTACTTCAACAGA+AGG 0.528664 7_3:+66684995 Msa1118130:CDS
GAGATCCGGGGTTCAAACTC+CGG 0.529099 7_3:+66692559 Msa1118130:three_prime_UTR
GTTGATTGGACAAGAACCTC+TGG 0.533008 7_3:+66685727 Msa1118130:three_prime_UTR
TTGAGTGAAGATCCTGTTGG+TGG 0.533250 7_3:+66685985 Msa1118130:three_prime_UTR
TGAAACTATGTGACTTGTTG+TGG 0.534841 7_3:-66683734 None:intergenic
TAGAGATGATTATTAGCTCA+AGG 0.537342 7_3:+66685757 Msa1118130:three_prime_UTR
AATGCTGGCTATGGAAATGC+AGG 0.541022 7_3:+66685145 Msa1118130:CDS
GAATCAAGTAATGGTGGTGA+TGG 0.544567 7_3:+66685080 Msa1118130:CDS
TTTAGAAGAAGTGAAAGCAA+AGG 0.548007 7_3:-66683428 None:intergenic
GAAATGCAGGGTCTTGGAAG+AGG 0.548123 7_3:+66685158 Msa1118130:CDS
TGACAAACAAGTGTTAATGA+TGG 0.548560 7_3:+66684833 Msa1118130:CDS
TCAACAGAAGGAAAAGAGAA+AGG 0.548892 7_3:+66685007 Msa1118130:CDS
ATCAGTCCATCATACGAAGA+AGG 0.549857 7_3:-66685407 None:intergenic
TTATTCCACGGCCAATGGAG+GGG 0.553219 7_3:+66683653 Msa1118130:CDS
GAAACTATGTGACTTGTTGT+GGG 0.554070 7_3:-66683733 None:intergenic
TTCTTCAAGCAATGGAGGAA+AGG 0.554568 7_3:+66684898 Msa1118130:CDS
ACCAACTGAGCTAAGCTCAT+GGG 0.556175 7_3:-66692514 None:intergenic
TTCTCTCTTATTGATTAGGT+AGG 0.556399 7_3:+66685694 Msa1118130:three_prime_UTR
ATGATTCAGAAGATGTAGAA+TGG 0.562150 7_3:+66685919 Msa1118130:three_prime_UTR
AGAGTTGGAAATGCTGGCTA+TGG 0.563110 7_3:+66685136 Msa1118130:CDS
GATCAACGGTTGTTATTCCA+CGG 0.563873 7_3:+66683641 Msa1118130:CDS
ATGGAGGGGCTTCATGAAGT+AGG 0.569714 7_3:+66683667 Msa1118130:CDS
CAAGTAATGGTGGTGATGGA+AGG 0.570233 7_3:+66685084 Msa1118130:CDS
AGTGTCAGAGTTGGAAATGC+TGG 0.571819 7_3:+66685130 Msa1118130:CDS
CCAAATACTCTTCTTTCACC+GGG 0.572214 7_3:-66683567 None:intergenic
TGAATAAAGAACTTGATGAA+GGG 0.573949 7_3:+66685231 Msa1118130:CDS
TCATCATCGACATATGAAAG+AGG 0.574909 7_3:+66683607 Msa1118130:CDS
ATCCATTCTTCAAGCAATGG+AGG 0.576630 7_3:+66684893 Msa1118130:CDS
AAGATGCTATTACTAAGAAG+AGG 0.582617 7_3:+66685036 Msa1118130:CDS
TACCAACTGAGCTAAGCTCA+TGG 0.582928 7_3:-66692515 None:intergenic
GAGTGTACCACATTTCCAGC+AGG 0.585486 7_3:-66689702 None:intergenic
AAGATCCATTCTTCAAGCAA+TGG 0.586126 7_3:+66684890 Msa1118130:CDS
TGTATGTTTGGTATACCAAT+GGG 0.590046 7_3:+66685589 Msa1118130:three_prime_UTR
GTGTCCTTCTATGTTCATGT+TGG 0.591878 7_3:+66689822 Msa1118130:three_prime_UTR
ACTAGTAGCGTGGTCTTGGT+TGG 0.592151 7_3:+66685458 Msa1118130:three_prime_UTR
TATGAAAGAGGAAGTGATGA+GGG 0.592553 7_3:+66683619 Msa1118130:CDS
AGTTATGCACATTTGGAATG+TGG 0.602220 7_3:-66689845 None:intergenic
GAGTACAAGCTTATTGCAAG+TGG 0.604992 7_3:+66692404 Msa1118130:three_prime_UTR
ATAGTTTCATGGAGCAGAGG+TGG 0.609892 7_3:+66683748 Msa1118130:CDS
AGGAAGTGATGAGGGATCAA+CGG 0.610055 7_3:+66683627 Msa1118130:CDS
CACATAGTTTCATGGAGCAG+AGG 0.610814 7_3:+66683745 Msa1118130:CDS
GACATCTCCTGCTGGAAATG+TGG 0.610948 7_3:+66689695 Msa1118130:three_prime_UTR
AATGTGGTACACTCTTTGAA+GGG 0.611243 7_3:+66689711 Msa1118130:three_prime_UTR
GAGTATGGAGAATCAAGTAA+TGG 0.613238 7_3:+66685071 Msa1118130:CDS
ATGCAGGGTCTTGGAAGAGG+TGG 0.614702 7_3:+66685161 Msa1118130:CDS
AAGTCGTTAAGGCAGTTGAA+AGG 0.615874 7_3:-66683207 None:intergenic
ATATTTGAAGAAAGCTAAAG+CGG 0.616781 7_3:-66683154 None:intergenic
CTAAAGCGGAAATGTTGTGA+GGG 0.616847 7_3:-66683140 None:intergenic
CCAACTGAGCTAAGCTCATG+GGG 0.616979 7_3:-66692513 None:intergenic
CTATTACTAAGAAGAGGAGA+AGG 0.622937 7_3:+66685042 Msa1118130:CDS
GATTCGGACTCAAAATCGAT+CGG 0.623594 7_3:+66685433 Msa1118130:three_prime_UTR
AAAGACATTTGATGTTGTGG+AGG 0.626606 7_3:+66683708 Msa1118130:CDS
AAATGGTGATGAGTGTAAGA+AGG 0.628298 7_3:-66683350 None:intergenic
ATATGAAAGAGGAAGTGATG+AGG 0.628523 7_3:+66683618 Msa1118130:CDS
AGCCAAAAGAACTCAAACAG+AGG 0.629413 7_3:-66692702 None:intergenic
AATGTCTTTGTGAGAAATGG+TGG 0.633018 7_3:-66683694 None:intergenic
CTCTTTGAAGGGAACGTCAG+GGG 0.640550 7_3:+66689722 Msa1118130:three_prime_UTR
TTCATATGTCGATGATGACG+AGG 0.651722 7_3:-66683602 None:intergenic
TGTTTGGTATACCAATGGGT+TGG 0.652950 7_3:+66685593 Msa1118130:three_prime_UTR
TATGGAGAATCAAGTAATGG+TGG 0.653267 7_3:+66685074 Msa1118130:CDS
ACTCTTTGAAGGGAACGTCA+GGG 0.654256 7_3:+66689721 Msa1118130:three_prime_UTR
AAATGTTCATAATAAAGGAG+AGG 0.661298 7_3:-66683386 None:intergenic
GTCTTTGTGAGAAATGGTGG+TGG 0.661352 7_3:-66683691 None:intergenic
TAAAATGAACTATCTCTACC+CGG 0.661608 7_3:+66683549 Msa1118130:exon
TGAGCGCATGTCTGGTATCG+TGG 0.664697 7_3:-66685653 None:intergenic
TGTGACCGGAGTTTGAACCC+CGG 0.670383 7_3:-66692564 None:intergenic
TCATCTCTATCAACTACCAG+AGG 0.673100 7_3:-66685743 None:intergenic
GCTAAAGCGGAAATGTTGTG+AGG 0.675662 7_3:-66683141 None:intergenic
TCGATCGGACACTAGTAGCG+TGG 0.693161 7_3:+66685448 Msa1118130:three_prime_UTR
TCACAACAACAATCATCACA+AGG 0.699849 7_3:+66684753 Msa1118130:CDS
CATAATATATGTGAGATCCG+GGG 0.701038 7_3:+66692547 Msa1118130:three_prime_UTR
GCAATGGAGGAAAGGCTACG+TGG 0.702933 7_3:+66684906 Msa1118130:CDS
AAACTTGTAAGGTCTACACT+CGG 0.707311 7_3:-66692467 None:intergenic
AAACTATGTGACTTGTTGTG+GGG 0.712916 7_3:-66683732 None:intergenic
GTATCAGAGTATGTTGAACA+TGG 0.734375 7_3:+66689237 Msa1118130:intron
ATGCTGGCTATGGAAATGCA+GGG 0.739262 7_3:+66685146 Msa1118130:CDS
TCAGAGTATGTTGAACATGG+CGG 0.783314 7_3:+66689240 Msa1118130:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTAAAATATTAAAAA+TGG + chr7_3:66687580-66687599 Msa1118130:intron 0.0%
!! ATTATTATTAAAACAATAAG+AGG - chr7_3:66685880-66685899 None:intergenic 10.0%
!!! ATTATTTTTTTAAATGAGAA+AGG - chr7_3:66686178-66686197 None:intergenic 10.0%
!! AATATATAAAGAATTATTAG+GGG + chr7_3:66686195-66686214 Msa1118130:intron 10.0%
!! ACAAATCATTAATTAAATTA+AGG - chr7_3:66686439-66686458 None:intergenic 10.0%
!!! TCTAATATTTTGTATAAATT+TGG - chr7_3:66686831-66686850 None:intergenic 10.0%
!!! GAAATCATTTTTTTTTTTTA+GGG - chr7_3:66687465-66687484 None:intergenic 10.0%
!!! AGAAATCATTTTTTTTTTTT+AGG - chr7_3:66687466-66687485 None:intergenic 10.0%
!!! TTATATTTTAGAATTTTTGT+TGG - chr7_3:66690137-66690156 None:intergenic 10.0%
!!! ATTCTAAAATATAATGTTAA+TGG + chr7_3:66690143-66690162 Msa1118130:intron 10.0%
!!! AATATAATGTTATTTTCAAA+GGG + chr7_3:66690357-66690376 Msa1118130:intron 10.0%
!! ATTAATTCAAAATAATTGTT+TGG + chr7_3:66691332-66691351 Msa1118130:intron 10.0%
!!! AAGTTTTTTTTTTTTTGTGA+AGG - chr7_3:66683268-66683287 None:intergenic 15.0%
!! AATGAAAATGTTCATAATAA+AGG - chr7_3:66683394-66683413 None:intergenic 15.0%
!!! TTAAGATCAAAATTTTCTTT+TGG - chr7_3:66683935-66683954 None:intergenic 15.0%
!! AAAATTAAATCTAAGAAGAT+TGG + chr7_3:66683981-66684000 Msa1118130:intron 15.0%
!!! ATTTTACATTACTTGTATAT+TGG + chr7_3:66684067-66684086 Msa1118130:intron 15.0%
!! ATTCAGATAACATATATAAA+AGG - chr7_3:66684171-66684190 None:intergenic 15.0%
!!! TTTTATGGAGTTTAAAAAAA+AGG - chr7_3:66684334-66684353 None:intergenic 15.0%
!! TAGAAACACAAAAATTTAAA+TGG - chr7_3:66685530-66685549 None:intergenic 15.0%
!!! ATTCTTTTTTTTTTTTGAGT+GGG - chr7_3:66685819-66685838 None:intergenic 15.0%
!! AACAATTGTAAAGTTTAAAA+GGG - chr7_3:66686040-66686059 None:intergenic 15.0%
!! AAACAATTGTAAAGTTTAAA+AGG - chr7_3:66686041-66686060 None:intergenic 15.0%
!! ATATATAAAGAATTATTAGG+GGG + chr7_3:66686196-66686215 Msa1118130:intron 15.0%
!!! ATATTAGAGATTTTTCAAAA+GGG + chr7_3:66686367-66686386 Msa1118130:intron 15.0%
!!! TTCAACATATTCTTTTTTAT+TGG + chr7_3:66686784-66686803 Msa1118130:intron 15.0%
!!! TAGAAGTATTACTATTTTAT+TGG - chr7_3:66687185-66687204 None:intergenic 15.0%
!! TGTTAAGTTAAATTATTAGT+TGG + chr7_3:66687329-66687348 Msa1118130:intron 15.0%
!!! TCATTTTTTTAACGAATTTA+TGG - chr7_3:66688709-66688728 None:intergenic 15.0%
!!! GAATATAATGTTATTTTCAA+AGG + chr7_3:66690356-66690375 Msa1118130:intron 15.0%
!!! ATATAATGTTATTTTCAAAG+GGG + chr7_3:66690358-66690377 Msa1118130:intron 15.0%
!!! AATAATGGAAATATTTTCTA+AGG + chr7_3:66691233-66691252 Msa1118130:intron 15.0%
!!! ATTTACTTATTTTTGCTTTT+GGG + chr7_3:66692081-66692100 Msa1118130:intron 15.0%
!!! ATTTTTTTTTTTTTTGTGAC+CGG - chr7_3:66692581-66692600 None:intergenic 15.0%
!! TACAAATAAGTAAGAAAAAT+GGG - chr7_3:66692659-66692678 None:intergenic 15.0%
!! TTACAAATAAGTAAGAAAAA+TGG - chr7_3:66692660-66692679 None:intergenic 15.0%
!!! TTTCTTTTGGTTACTTAATT+GGG - chr7_3:66683922-66683941 None:intergenic 20.0%
!!! TTTTCTTTTGGTTACTTAAT+TGG - chr7_3:66683923-66683942 None:intergenic 20.0%
!!! CCAGATAATACTATTTTTTA+TGG - chr7_3:66684349-66684368 None:intergenic 20.0%
!! CCATAAAAAATAGTATTATC+TGG + chr7_3:66684346-66684365 Msa1118130:intron 20.0%
!! AATAAAAAACCTAACTCATA+TGG - chr7_3:66684578-66684597 None:intergenic 20.0%
!!! TTTTATTTTAAATGTCGATG+TGG + chr7_3:66684591-66684610 Msa1118130:intron 20.0%
!!! TTTATTTTAAATGTCGATGT+GGG + chr7_3:66684592-66684611 Msa1118130:intron 20.0%
!!! ACTCAATTTTTTTGTATACA+GGG + chr7_3:66684615-66684634 Msa1118130:intron 20.0%
!! AAAAATTGATCCTGATAAAT+GGG + chr7_3:66684644-66684663 Msa1118130:CDS 20.0%
!!! CATTCTTTTTTTTTTTTGAG+TGG - chr7_3:66685820-66685839 None:intergenic 20.0%
!!! GATATTAGAGATTTTTCAAA+AGG + chr7_3:66686366-66686385 Msa1118130:intron 20.0%
!!! TATTAGAGATTTTTCAAAAG+GGG + chr7_3:66686368-66686387 Msa1118130:intron 20.0%
!! TATGTCCTTAAAAAAAAAAG+TGG - chr7_3:66686900-66686919 None:intergenic 20.0%
!!! TTTTCCATGATTTATTTTGT+CGG + chr7_3:66686975-66686994 Msa1118130:intron 20.0%
!! AAAAATAAAATGACCAAAAG+TGG - chr7_3:66687213-66687232 None:intergenic 20.0%
!!! TATTATAATGAGTTTTTTGC+AGG - chr7_3:66687674-66687693 None:intergenic 20.0%
!! ACTCATTATAATATTGTACA+AGG + chr7_3:66687681-66687700 Msa1118130:intron 20.0%
!! ATAATATTGTACAAGGTATA+TGG + chr7_3:66687688-66687707 Msa1118130:intron 20.0%
!! ATAAACTTTGCTTATCAAAA+TGG - chr7_3:66687799-66687818 None:intergenic 20.0%
!! TGATAAGCAAAGTTTATTAA+TGG + chr7_3:66687802-66687821 Msa1118130:intron 20.0%
!! GATAAGCAAAGTTTATTAAT+GGG + chr7_3:66687803-66687822 Msa1118130:intron 20.0%
!!! TAGCACTCATATTTTATAAT+GGG - chr7_3:66687852-66687871 None:intergenic 20.0%
!!! TTAGCACTCATATTTTATAA+TGG - chr7_3:66687853-66687872 None:intergenic 20.0%
!!! TTTATGTTTTGTAATGTTGT+TGG - chr7_3:66688860-66688879 None:intergenic 20.0%
!! ATTAACAATCATAACAAAGT+GGG + chr7_3:66689108-66689127 Msa1118130:intron 20.0%
!! TTTGAATTCTCTAATTTAAC+TGG + chr7_3:66689993-66690012 Msa1118130:intron 20.0%
!!! TTAATGGACCAATAAAATTA+AGG + chr7_3:66690159-66690178 Msa1118130:intron 20.0%
!! TAAAGAAAAATGATCAAGAA+AGG + chr7_3:66690198-66690217 Msa1118130:intron 20.0%
!! AAAGAAAAATGATCAAGAAA+GGG + chr7_3:66690199-66690218 Msa1118130:intron 20.0%
!!! TATAATGTTATTTTCAAAGG+GGG + chr7_3:66690359-66690378 Msa1118130:intron 20.0%
!! TTCTTAGACTAAGTATATAA+TGG + chr7_3:66690409-66690428 Msa1118130:intron 20.0%
!! TCTTAGACTAAGTATATAAT+GGG + chr7_3:66690410-66690429 Msa1118130:intron 20.0%
!!! TTAGTTTCTCCTTTTATAAT+GGG + chr7_3:66690433-66690452 Msa1118130:intron 20.0%
!!! CTCATTTTCTTTGTAAATTA+TGG - chr7_3:66690612-66690631 None:intergenic 20.0%
!! CATAATTTACAAAGAAAATG+AGG + chr7_3:66690610-66690629 Msa1118130:intron 20.0%
!!! ATTATTTGAAGCCTTATAAA+AGG - chr7_3:66691219-66691238 None:intergenic 20.0%
!!! TTTTATAAGGCTTCAAATAA+TGG + chr7_3:66691218-66691237 Msa1118130:intron 20.0%
!!! AAATATTGACTTAGAGTATT+TGG + chr7_3:66691775-66691794 Msa1118130:intron 20.0%
!! ATAAGTAAATGAAAACTACT+TGG - chr7_3:66692071-66692090 None:intergenic 20.0%
!!! CATTTACTTATTTTTGCTTT+TGG + chr7_3:66692080-66692099 Msa1118130:intron 20.0%
!! AAAAAAATCACAATGTATTG+CGG + chr7_3:66692593-66692612 Msa1118130:three_prime_UTR 20.0%
! ATATTTGAAGAAAGCTAAAG+CGG - chr7_3:66683157-66683176 None:intergenic 25.0%
!!! CTTTAGCTTTCTTCAAATAT+AGG + chr7_3:66683157-66683176 Msa1118130:five_prime_UTR 25.0%
! AGGAAAAAAAAAACAAGATG+AGG - chr7_3:66683190-66683209 None:intergenic 25.0%
!! GTTTTGTGAAAGAAGAAATT+TGG - chr7_3:66683234-66683253 None:intergenic 25.0%
!!! TTTTTTTTTGTGAAGGAGAA+GGG - chr7_3:66683261-66683280 None:intergenic 25.0%
!!! TTTTTTTTTTGTGAAGGAGA+AGG - chr7_3:66683262-66683281 None:intergenic 25.0%
! GATATGTGAAAGAAGAAATT+TGG - chr7_3:66683292-66683311 None:intergenic 25.0%
! AAAGAAAAAAGATGAAGCAT+TGG - chr7_3:66683328-66683347 None:intergenic 25.0%
! AAATGTTCATAATAAAGGAG+AGG - chr7_3:66683389-66683408 None:intergenic 25.0%
!!! AAATATTATTTAGCTTGCGT+AGG - chr7_3:66684131-66684150 None:intergenic 25.0%
! TATTTATTGCCATATGAGTT+AGG + chr7_3:66684566-66684585 Msa1118130:intron 25.0%
!!! GACTCAATTTTTTTGTATAC+AGG + chr7_3:66684614-66684633 Msa1118130:intron 25.0%
! GAAAAATTGATCCTGATAAA+TGG + chr7_3:66684643-66684662 Msa1118130:CDS 25.0%
!! TTTTAGCAAACATTAAGAGA+AGG + chr7_3:66684706-66684725 Msa1118130:CDS 25.0%
! ATGAATAAAGAACTTGATGA+AGG + chr7_3:66685230-66685249 Msa1118130:CDS 25.0%
! TGAATAAAGAACTTGATGAA+GGG + chr7_3:66685231-66685250 Msa1118130:CDS 25.0%
! CGATTAAGCGTAATTTATTT+CGG - chr7_3:66685380-66685399 None:intergenic 25.0%
!! ATGTTTCTCTCTTATTGATT+AGG + chr7_3:66685690-66685709 Msa1118130:three_prime_UTR 25.0%
!! TGAATCATCTACATTTGTTA+AGG - chr7_3:66685907-66685926 None:intergenic 25.0%
!! TTGTGGTCTTGAAATAAAAA+GGG + chr7_3:66686072-66686091 Msa1118130:intron 25.0%
!!! GAGAGAATACTTATTTTGAT+TGG + chr7_3:66686390-66686409 Msa1118130:intron 25.0%
! ATGAAATTACTTCAAGTGAA+AGG + chr7_3:66686659-66686678 Msa1118130:intron 25.0%
!! TATGAACGAGATTATTCTTT+TGG - chr7_3:66686698-66686717 None:intergenic 25.0%
! GATAACACATCTCATATATA+AGG + chr7_3:66686873-66686892 Msa1118130:intron 25.0%
!!! AAGGTCCACTTTTTTTTTTA+AGG + chr7_3:66686892-66686911 Msa1118130:intron 25.0%
!!! GATAATCGTTTTAAAGTAGA+TGG - chr7_3:66687021-66687040 None:intergenic 25.0%
!! TAATTATAGGTGTTCTAGAT+TGG - chr7_3:66687116-66687135 None:intergenic 25.0%
!! ATCTAGAACACCTATAATTA+TGG + chr7_3:66687116-66687135 Msa1118130:intron 25.0%
! TAACATTGAGTTTATACACT+TGG - chr7_3:66687150-66687169 None:intergenic 25.0%
!!! TACTTCTAAAATACCACTTT+TGG + chr7_3:66687197-66687216 Msa1118130:intron 25.0%
! AAAATAAGTCACAAGAATAG+TGG - chr7_3:66687301-66687320 None:intergenic 25.0%
!!! TGCATTTTTGGATCTAAAAA+TGG + chr7_3:66687609-66687628 Msa1118130:intron 25.0%
!!! GCATTTTTGGATCTAAAAAT+GGG + chr7_3:66687610-66687629 Msa1118130:intron 25.0%
!! AAGTGATTTGTCTATTGTTA+TGG - chr7_3:66687986-66688005 None:intergenic 25.0%
!! TCACATTTTCCATTTCTTAA+AGG + chr7_3:66688177-66688196 Msa1118130:intron 25.0%
!! TTTGAATTTTTGATGTTGCA+AGG - chr7_3:66688504-66688523 None:intergenic 25.0%
!! TGATCATCAAACAACATTTT+GGG - chr7_3:66688531-66688550 None:intergenic 25.0%
!! ATGATCATCAAACAACATTT+TGG - chr7_3:66688532-66688551 None:intergenic 25.0%
!!! TCATTAATGTCACTCTTTTT+TGG + chr7_3:66688548-66688567 Msa1118130:intron 25.0%
!! ATTTGGTTAACTAGTTTAAC+AGG - chr7_3:66688983-66689002 None:intergenic 25.0%
!!! ACTTTTAACGGCTTTAAATT+TGG - chr7_3:66689000-66689019 None:intergenic 25.0%
!! TAAGTGATCAGAACTTTTAA+CGG - chr7_3:66689012-66689031 None:intergenic 25.0%
!! CTTAATTTACTATCAAGTTG+TGG - chr7_3:66689087-66689106 None:intergenic 25.0%
! CATTAACAATCATAACAAAG+TGG + chr7_3:66689107-66689126 Msa1118130:intron 25.0%
!! GCAATTGTGATAATTTTCTT+AGG + chr7_3:66689159-66689178 Msa1118130:intron 25.0%
!! TCATGGATCATGATATATTT+TGG + chr7_3:66689289-66689308 Msa1118130:three_prime_UTR 25.0%
!!! GTATTTTGTTTTGTGATTTG+TGG + chr7_3:66689650-66689669 Msa1118130:intron 25.0%
! TTAAATTAAACTTGCACGAA+TGG + chr7_3:66689900-66689919 Msa1118130:intron 25.0%
! AATTATTCAATTAGCCCTAT+AGG - chr7_3:66689941-66689960 None:intergenic 25.0%
!! ATAGTTTTCACCTTACAAAT+CGG + chr7_3:66690090-66690109 Msa1118130:intron 25.0%
! CCAATAAAATTAAGGTGATT+CGG + chr7_3:66690167-66690186 Msa1118130:intron 25.0%
! AATCACTTAAGTACACAATA+AGG - chr7_3:66690274-66690293 None:intergenic 25.0%
! AACGTGTACTTAATCAATTA+TGG + chr7_3:66690308-66690327 Msa1118130:intron 25.0%
!!! GTTAGTTTCTCCTTTTATAA+TGG + chr7_3:66690432-66690451 Msa1118130:intron 25.0%
!!! GTTGTTTAGAGTTTTTTGAA+AGG - chr7_3:66690563-66690582 None:intergenic 25.0%
!! AGCTTTTCTTTCTATTGTTT+TGG - chr7_3:66690650-66690669 None:intergenic 25.0%
!!! TCACACATTGATTTACATTA+CGG - chr7_3:66690803-66690822 None:intergenic 25.0%
! AGAGACTTAATAAAGTTAGT+TGG + chr7_3:66690849-66690868 Msa1118130:intron 25.0%
! GAGACTTAATAAAGTTAGTT+GGG + chr7_3:66690850-66690869 Msa1118130:intron 25.0%
!!! GCATTTTGATCATTTACTTT+GGG - chr7_3:66690956-66690975 None:intergenic 25.0%
! GGAGGATATGATAAAAAAAT+TGG - chr7_3:66691112-66691131 None:intergenic 25.0%
!!! TTTTCTAAGGCTTCAAATAT+TGG + chr7_3:66691157-66691176 Msa1118130:intron 25.0%
! TGAAAGAAAAAGTTGGAATA+TGG + chr7_3:66691530-66691549 Msa1118130:intron 25.0%
! GAAAGAAAAAGTTGGAATAT+GGG + chr7_3:66691531-66691550 Msa1118130:intron 25.0%
!!! ATGAGTTTGTTAGATAGTAT+TGG + chr7_3:66691872-66691891 Msa1118130:intron 25.0%
!!! TGAGTTTGTTAGATAGTATT+GGG + chr7_3:66691873-66691892 Msa1118130:intron 25.0%
! AAGTTATATGTGAAAAGAGA+GGG - chr7_3:66691970-66691989 None:intergenic 25.0%
! AAAGTTATATGTGAAAAGAG+AGG - chr7_3:66691971-66691990 None:intergenic 25.0%
! TACATAATATATGTGAGATC+CGG + chr7_3:66692545-66692564 Msa1118130:three_prime_UTR 25.0%
! GGAAAAACAAAATGATCAAT+AGG - chr7_3:66692638-66692657 None:intergenic 25.0%
AGAAATTTGGAAAGTCGTTA+AGG - chr7_3:66683221-66683240 None:intergenic 30.0%
!! AGATGAAGCATTGGAAATTA+GGG - chr7_3:66683319-66683338 None:intergenic 30.0%
!! AAGATGAAGCATTGGAAATT+AGG - chr7_3:66683320-66683339 None:intergenic 30.0%
GAGGATTAGATTCAATGAAA+TGG - chr7_3:66683370-66683389 None:intergenic 30.0%
TTTAGAAGAAGTGAAAGCAA+AGG - chr7_3:66683431-66683450 None:intergenic 30.0%
ATTCACGACCTAAAATTTGA+GGG - chr7_3:66683527-66683546 None:intergenic 30.0%
AATTCACGACCTAAAATTTG+AGG - chr7_3:66683528-66683547 None:intergenic 30.0%
TAAAATGAACTATCTCTACC+CGG + chr7_3:66683549-66683568 Msa1118130:exon 30.0%
TCAAATGTCTTTGTGAGAAA+TGG - chr7_3:66683700-66683719 None:intergenic 30.0%
! TTGTTGTGTTTGAAGTATCT+AGG - chr7_3:66683823-66683842 None:intergenic 30.0%
GATGAGAAGAATACTTACAT+AGG - chr7_3:66683875-66683894 None:intergenic 30.0%
! CTTATTGTTTCCTGGATTTT+TGG + chr7_3:66684405-66684424 Msa1118130:intron 30.0%
CATCTTAGTTCAACATCAAA+TGG - chr7_3:66684457-66684476 None:intergenic 30.0%
TACCATTATACCATTACCTA+TGG + chr7_3:66684521-66684540 Msa1118130:intron 30.0%
! AACCATAGGTAATGGTATAA+TGG - chr7_3:66684526-66684545 None:intergenic 30.0%
TGACAAACAAGTGTTAATGA+TGG + chr7_3:66684833-66684852 Msa1118130:CDS 30.0%
! CATTTGTTGCTGCTTAATTT+CGG - chr7_3:66684934-66684953 None:intergenic 30.0%
AATTAAGCAGCAACAAATGA+TGG + chr7_3:66684935-66684954 Msa1118130:CDS 30.0%
AGTAATTGCTGAATAAAAGC+TGG - chr7_3:66684987-66685006 None:intergenic 30.0%
AAGATGCTATTACTAAGAAG+AGG + chr7_3:66685036-66685055 Msa1118130:CDS 30.0%
!! ATGATGGACTGATTAAGATT+CGG + chr7_3:66685417-66685436 Msa1118130:three_prime_UTR 30.0%
! ATATGTCCTTTTGTAGTAAC+AGG + chr7_3:66685561-66685580 Msa1118130:three_prime_UTR 30.0%
TGTATGTTTGGTATACCAAT+GGG + chr7_3:66685589-66685608 Msa1118130:three_prime_UTR 30.0%
! TTCTCTCTTATTGATTAGGT+AGG + chr7_3:66685694-66685713 Msa1118130:three_prime_UTR 30.0%
TAGAGATGATTATTAGCTCA+AGG + chr7_3:66685757-66685776 Msa1118130:three_prime_UTR 30.0%
ATGATTCAGAAGATGTAGAA+TGG + chr7_3:66685919-66685938 Msa1118130:three_prime_UTR 30.0%
GAAAAAATATCAAACCGACA+AGG - chr7_3:66686015-66686034 None:intergenic 30.0%
! TTGTTTGTACTTTTGTCTTG+TGG + chr7_3:66686055-66686074 Msa1118130:intron 30.0%
! CTTGTGGTCTTGAAATAAAA+AGG + chr7_3:66686071-66686090 Msa1118130:intron 30.0%
AAATAAAAAGGGAAAGAGAG+AGG + chr7_3:66686083-66686102 Msa1118130:intron 30.0%
AACATCATGAAATTCGTTGA+TGG - chr7_3:66686112-66686131 None:intergenic 30.0%
! TACATATGTAGTGTTTTGCT+AGG + chr7_3:66686131-66686150 Msa1118130:intron 30.0%
CATGTTTCTCACATAGATTA+AGG + chr7_3:66686460-66686479 Msa1118130:intron 30.0%
ATATGACAATAGATGACAAG+TGG - chr7_3:66686931-66686950 None:intergenic 30.0%
AAGACCGACAAAATAAATCA+TGG - chr7_3:66686982-66687001 None:intergenic 30.0%
GGTTTCTACACCATAATTAT+AGG - chr7_3:66687129-66687148 None:intergenic 30.0%
! AATAGTGGTGGAGAAAATAT+AGG - chr7_3:66687286-66687305 None:intergenic 30.0%
ATCTGATTACATAGCAGATT+GGG - chr7_3:66687763-66687782 None:intergenic 30.0%
! CTATGTAATCAGATCCATTT+TGG + chr7_3:66687769-66687788 Msa1118130:intron 30.0%
ATCAAAATGGATGTCCAAAA+TGG - chr7_3:66687786-66687805 None:intergenic 30.0%
! AGTTTATTAATGGGAGCATA+AGG + chr7_3:66687812-66687831 Msa1118130:intron 30.0%
! GTTTATTAATGGGAGCATAA+GGG + chr7_3:66687813-66687832 Msa1118130:intron 30.0%
! TTTATTAATGGGAGCATAAG+GGG + chr7_3:66687814-66687833 Msa1118130:intron 30.0%
CAACATCAAAATAGTGACTT+GGG - chr7_3:66687962-66687981 None:intergenic 30.0%
ACAACATCAAAATAGTGACT+TGG - chr7_3:66687963-66687982 None:intergenic 30.0%
CATATCAATACCATTGAACA+TGG - chr7_3:66688093-66688112 None:intergenic 30.0%
! TCCTTTTGCAAATGTGATAT+GGG - chr7_3:66688138-66688157 None:intergenic 30.0%
! CATTCTTTGCCTTTAAGAAA+TGG - chr7_3:66688189-66688208 None:intergenic 30.0%
ACTAAGACTTGAATGTTAGA+TGG + chr7_3:66688212-66688231 Msa1118130:intron 30.0%
ATTGTTCATGAAGTGAAACT+CGG + chr7_3:66688464-66688483 Msa1118130:intron 30.0%
! ATCATCAAACAACATTTTGG+GGG - chr7_3:66688529-66688548 None:intergenic 30.0%
! GATCATCAAACAACATTTTG+GGG - chr7_3:66688530-66688549 None:intergenic 30.0%
AATGATAGCATTGCATTGTT+TGG + chr7_3:66688724-66688743 Msa1118130:intron 30.0%
AAAGATAGAGAGAGATAGAT+GGG - chr7_3:66688759-66688778 None:intergenic 30.0%
! ATGTTTTGTAATGTTGTTGG+AGG - chr7_3:66688857-66688876 None:intergenic 30.0%
TTTACAAAAGAGATCTAAGC+TGG + chr7_3:66689051-66689070 Msa1118130:intron 30.0%
AGATCTAAGCTGGTTAATTT+AGG + chr7_3:66689061-66689080 Msa1118130:intron 30.0%
TCATAACAAAGTGGGAAATA+TGG + chr7_3:66689116-66689135 Msa1118130:intron 30.0%
GACAACAAAATTTCCAGAAA+TGG - chr7_3:66689271-66689290 None:intergenic 30.0%
!! TTCTGGAAATTTTGTTGTCA+TGG + chr7_3:66689272-66689291 Msa1118130:three_prime_UTR 30.0%
CACAGTAAGATCATAATCAT+AGG + chr7_3:66689338-66689357 Msa1118130:intron 30.0%
ACTATTACAAAGACAAACCT+TGG + chr7_3:66689399-66689418 Msa1118130:intron 30.0%
TCTTGAAGATATAAGTGACT+CGG - chr7_3:66689536-66689555 None:intergenic 30.0%
GGTATGAATGTATGATCTAT+AGG + chr7_3:66689671-66689690 Msa1118130:intron 30.0%
CTTGTAAATTCCACTATTTC+TGG - chr7_3:66689766-66689785 None:intergenic 30.0%
TTAGCTAAGTTATGCACATT+TGG - chr7_3:66689855-66689874 None:intergenic 30.0%
! ATATTGGCTGATAATCCTAT+AGG + chr7_3:66689923-66689942 Msa1118130:intron 30.0%
! TATTGGCTGATAATCCTATA+GGG + chr7_3:66689924-66689943 Msa1118130:intron 30.0%
GGCTAATTGAATAATTGTGA+TGG + chr7_3:66689945-66689964 Msa1118130:intron 30.0%
! CCGAATCACCTTAATTTTAT+TGG - chr7_3:66690170-66690189 None:intergenic 30.0%
GTTAATTTCACTTGAGCATT+TGG + chr7_3:66690334-66690353 Msa1118130:intron 30.0%
!!! TTTCTCCTTTTATAATGGGT+TGG + chr7_3:66690437-66690456 Msa1118130:intron 30.0%
!!! TTCTCCTTTTATAATGGGTT+GGG + chr7_3:66690438-66690457 Msa1118130:intron 30.0%
!! GGCATTTTGATCATTTACTT+TGG - chr7_3:66690957-66690976 None:intergenic 30.0%
TAGAAAAAGACAACAGGAAA+GGG - chr7_3:66691144-66691163 None:intergenic 30.0%
TTAGAAAAAGACAACAGGAA+AGG - chr7_3:66691145-66691164 None:intergenic 30.0%
! TTTCCTGTTGTCTTTTTCTA+AGG + chr7_3:66691144-66691163 Msa1118130:intron 30.0%
ATTGAACAGCAAAATTGCTA+AGG + chr7_3:66691182-66691201 Msa1118130:intron 30.0%
!! CTCTTTTTCGTCCTTTTATA+AGG + chr7_3:66691205-66691224 Msa1118130:intron 30.0%
!! TGTTTGGTGATTTTTCCAAT+TGG + chr7_3:66691348-66691367 Msa1118130:intron 30.0%
ATGAAAACTACTTGGCTATT+GGG - chr7_3:66692063-66692082 None:intergenic 30.0%
AATGAAAACTACTTGGCTAT+TGG - chr7_3:66692064-66692083 None:intergenic 30.0%
TCAGCAATCTTCACATTAAT+TGG - chr7_3:66692123-66692142 None:intergenic 30.0%
! TGTAGACCTTACAAGTTTTA+CGG + chr7_3:66692472-66692491 Msa1118130:three_prime_UTR 30.0%
AATACACCGTAAAACTTGTA+AGG - chr7_3:66692481-66692500 None:intergenic 30.0%
ACATAATATATGTGAGATCC+GGG + chr7_3:66692546-66692565 Msa1118130:three_prime_UTR 30.0%
! AAATGGTGATGAGTGTAAGA+AGG - chr7_3:66683353-66683372 None:intergenic 35.0%
TCCAAATACTCTTCTTTCAC+CGG - chr7_3:66683571-66683590 None:intergenic 35.0%
TCATCATCGACATATGAAAG+AGG + chr7_3:66683607-66683626 Msa1118130:CDS 35.0%
ATATGAAAGAGGAAGTGATG+AGG + chr7_3:66683618-66683637 Msa1118130:CDS 35.0%
TATGAAAGAGGAAGTGATGA+GGG + chr7_3:66683619-66683638 Msa1118130:CDS 35.0%
AATGTCTTTGTGAGAAATGG+TGG - chr7_3:66683697-66683716 None:intergenic 35.0%
CACAAAGACATTTGATGTTG+TGG + chr7_3:66683705-66683724 Msa1118130:CDS 35.0%
AAAGACATTTGATGTTGTGG+AGG + chr7_3:66683708-66683727 Msa1118130:CDS 35.0%
!! AAACTATGTGACTTGTTGTG+GGG - chr7_3:66683735-66683754 None:intergenic 35.0%
!! GAAACTATGTGACTTGTTGT+GGG - chr7_3:66683736-66683755 None:intergenic 35.0%
!! TGAAACTATGTGACTTGTTG+TGG - chr7_3:66683737-66683756 None:intergenic 35.0%
CAACAAGTCACATAGTTTCA+TGG + chr7_3:66683737-66683756 Msa1118130:CDS 35.0%
! GTTTGAAGTATCTAGGAAGA+AGG - chr7_3:66683816-66683835 None:intergenic 35.0%
!!! TTTCCTGGATTTTTGGTTTC+TGG + chr7_3:66684412-66684431 Msa1118130:intron 35.0%
AATCCAGAAACCAAAAATCC+AGG - chr7_3:66684418-66684437 None:intergenic 35.0%
ATTGCTTCAACCATAGGTAA+TGG - chr7_3:66684534-66684553 None:intergenic 35.0%
TTTGCAAACTCCCATTTATC+AGG - chr7_3:66684657-66684676 None:intergenic 35.0%
AAATGGGAGTTTGCAAATGA+AGG + chr7_3:66684660-66684679 Msa1118130:CDS 35.0%
GCAAATGAAGGATTTCTAAG+AGG + chr7_3:66684672-66684691 Msa1118130:CDS 35.0%
! GATTGTTGTTGTGAAGTACT+AGG - chr7_3:66684747-66684766 None:intergenic 35.0%
TCACAACAACAATCATCACA+AGG + chr7_3:66684753-66684772 Msa1118130:CDS 35.0%
AAGATCCATTCTTCAAGCAA+TGG + chr7_3:66684890-66684909 Msa1118130:CDS 35.0%
!!! GCAACAAATGATGGCTTTTT+TGG + chr7_3:66684944-66684963 Msa1118130:CDS 35.0%
TCAGCAATTACTTCAACAGA+AGG + chr7_3:66684995-66685014 Msa1118130:CDS 35.0%
TCAACAGAAGGAAAAGAGAA+AGG + chr7_3:66685007-66685026 Msa1118130:CDS 35.0%
CTATTACTAAGAAGAGGAGA+AGG + chr7_3:66685042-66685061 Msa1118130:CDS 35.0%
CTTGATTCTCCATACTCAAT+TGG - chr7_3:66685068-66685087 None:intergenic 35.0%
GAGTATGGAGAATCAAGTAA+TGG + chr7_3:66685071-66685090 Msa1118130:CDS 35.0%
TATGGAGAATCAAGTAATGG+TGG + chr7_3:66685074-66685093 Msa1118130:CDS 35.0%
! AAGAACTTGATGAAGGGTTT+TGG + chr7_3:66685237-66685256 Msa1118130:CDS 35.0%
! AGAACTTGATGAAGGGTTTT+GGG + chr7_3:66685238-66685257 Msa1118130:CDS 35.0%
GATTAACCTTCTTCGTATGA+TGG + chr7_3:66685401-66685420 Msa1118130:three_prime_UTR 35.0%
ACTACCAAGCAAAAAATCTG+TGG + chr7_3:66685501-66685520 Msa1118130:three_prime_UTR 35.0%
!!! GTTTCCACAGATTTTTTGCT+TGG - chr7_3:66685508-66685527 None:intergenic 35.0%
ACTTGACCTGTTACTACAAA+AGG - chr7_3:66685570-66685589 None:intergenic 35.0%
TAACAGGTCAAGTGTATGTT+TGG + chr7_3:66685577-66685596 Msa1118130:three_prime_UTR 35.0%
GTGTATGTTTGGTATACCAA+TGG + chr7_3:66685588-66685607 Msa1118130:three_prime_UTR 35.0%
!!! TTTTTGAGTGAAGATCCTGT+TGG + chr7_3:66685982-66686001 Msa1118130:three_prime_UTR 35.0%
CTATGTTCTTGAGAAATGAG+TGG + chr7_3:66686236-66686255 Msa1118130:intron 35.0%
ATTCTTCCTCAGTGTGAAAA+AGG - chr7_3:66686311-66686330 None:intergenic 35.0%
!!! TTCGTCCACTTTTTCATTTG+AGG + chr7_3:66686535-66686554 Msa1118130:intron 35.0%
CACAACCTCAAATGAAAAAG+TGG - chr7_3:66686543-66686562 None:intergenic 35.0%
! TCATTTGAGGTTGTGTCTAA+CGG + chr7_3:66686548-66686567 Msa1118130:intron 35.0%
TCTCGTTCATATTCTCTTCA+AGG + chr7_3:66686707-66686726 Msa1118130:intron 35.0%
!!! GATTTATTTTGTCGGTCTTG+AGG + chr7_3:66686983-66687002 Msa1118130:intron 35.0%
TCAAACATAGAGGCTTAACT+TGG - chr7_3:66687091-66687110 None:intergenic 35.0%
TAGATTGGACTCAAACATAG+AGG - chr7_3:66687101-66687120 None:intergenic 35.0%
ATAAGTCACAAGAATAGTGG+TGG - chr7_3:66687298-66687317 None:intergenic 35.0%
AGTAAGCGCAAATTCAATAG+TGG + chr7_3:66687553-66687572 Msa1118130:intron 35.0%
! AAATGGAGCAACTGCATTTT+TGG + chr7_3:66687597-66687616 Msa1118130:intron 35.0%
GATCTGATTACATAGCAGAT+TGG - chr7_3:66687764-66687783 None:intergenic 35.0%
! CACTTTGAAAGCAAGACAAA+GGG + chr7_3:66687874-66687893 Msa1118130:intron 35.0%
CAAAGGGTTAGAACACTAAA+AGG + chr7_3:66687890-66687909 Msa1118130:intron 35.0%
TCAATACCATTGAACATGGT+TGG - chr7_3:66688089-66688108 None:intergenic 35.0%
! CCTTTTGCAAATGTGATATG+GGG - chr7_3:66688137-66688156 None:intergenic 35.0%
! GTCCTTTTGCAAATGTGATA+TGG - chr7_3:66688139-66688158 None:intergenic 35.0%
AGAATGCAATATGAGACTTG+TGG - chr7_3:66688250-66688269 None:intergenic 35.0%
ATGCTCAAATCATGCAATTC+TGG - chr7_3:66688438-66688457 None:intergenic 35.0%
! TCATCAAACAACATTTTGGG+GGG - chr7_3:66688528-66688547 None:intergenic 35.0%
AAGATAGAGAGAGATAGATG+GGG - chr7_3:66688758-66688777 None:intergenic 35.0%
CAAAGATAGAGAGAGATAGA+TGG - chr7_3:66688760-66688779 None:intergenic 35.0%
! CGTTTTATAGTCATGTGTGT+TGG - chr7_3:66688931-66688950 None:intergenic 35.0%
ACAAAGTGGGAAATATGGAT+TGG + chr7_3:66689121-66689140 Msa1118130:intron 35.0%
GTATCAGAGTATGTTGAACA+TGG + chr7_3:66689237-66689256 Msa1118130:intron 35.0%
CTTACTGTGAAATCAATTCC+AGG - chr7_3:66689327-66689346 None:intergenic 35.0%
CTTGAAGATATAAGTGACTC+GGG - chr7_3:66689535-66689554 None:intergenic 35.0%
AAATGTGGTACACTCTTTGA+AGG + chr7_3:66689710-66689729 Msa1118130:three_prime_UTR 35.0%
AATGTGGTACACTCTTTGAA+GGG + chr7_3:66689711-66689730 Msa1118130:three_prime_UTR 35.0%
GAGTTAAAAGCCAGAAATAG+TGG + chr7_3:66689753-66689772 Msa1118130:three_prime_UTR 35.0%
! AGTTATGCACATTTGGAATG+TGG - chr7_3:66689848-66689867 None:intergenic 35.0%
GTGCATAACTTAGCTAAAGA+TGG + chr7_3:66689858-66689877 Msa1118130:three_prime_UTR 35.0%
AAACTTGCACGAATGGATAT+TGG + chr7_3:66689907-66689926 Msa1118130:intron 35.0%
!! TCATACAACACCGATTTGTA+AGG - chr7_3:66690103-66690122 None:intergenic 35.0%
!!! TCTCCTTTTATAATGGGTTG+GGG + chr7_3:66690439-66690458 Msa1118130:intron 35.0%
AAGCCTTAGAAAAAGACAAC+AGG - chr7_3:66691150-66691169 None:intergenic 35.0%
ATTTCCAAAAGTCCATTCGT+TGG + chr7_3:66691294-66691313 Msa1118130:intron 35.0%
TTTCCAAAAGTCCATTCGTT+GGG + chr7_3:66691295-66691314 Msa1118130:intron 35.0%
TTGATTAATCTCCCAACGAA+TGG - chr7_3:66691309-66691328 None:intergenic 35.0%
ACTTATTCTGCTGATCCAAT+TGG - chr7_3:66691366-66691385 None:intergenic 35.0%
CTAAATTTCCACGCTATCAA+CGG - chr7_3:66691390-66691409 None:intergenic 35.0%
AGTTAAGGGAAAGATGCAAT+TGG + chr7_3:66691455-66691474 Msa1118130:intron 35.0%
!! ATTTTGTGCAGCTTTGATTC+TGG + chr7_3:66691502-66691521 Msa1118130:intron 35.0%
GGTTCAGTGAAAGAAAAAGT+TGG + chr7_3:66691523-66691542 Msa1118130:intron 35.0%
! GTAAAACCGTCTTTTCACTT+GGG + chr7_3:66691624-66691643 Msa1118130:intron 35.0%
CTTGTATGCAACATGGTAAT+GGG - chr7_3:66691919-66691938 None:intergenic 35.0%
ACTTGTATGCAACATGGTAA+TGG - chr7_3:66691920-66691939 None:intergenic 35.0%
! GAGAGGGAATGTATGAATTT+TGG - chr7_3:66691954-66691973 None:intergenic 35.0%
TGAAAACTACTTGGCTATTG+GGG - chr7_3:66692062-66692081 None:intergenic 35.0%
AATTCCATGATCACTAGCAA+GGG - chr7_3:66692232-66692251 None:intergenic 35.0%
! GTAAAAGACAACACGTTTTC+TGG - chr7_3:66692358-66692377 None:intergenic 35.0%
! TGTTGTCTTTTACACACTCT+TGG + chr7_3:66692365-66692384 Msa1118130:three_prime_UTR 35.0%
AAACTTGTAAGGTCTACACT+CGG - chr7_3:66692470-66692489 None:intergenic 35.0%
CATAATATATGTGAGATCCG+GGG + chr7_3:66692547-66692566 Msa1118130:three_prime_UTR 35.0%
!! TTCCTCTGTTTGAGTTCTTT+TGG + chr7_3:66692700-66692719 Msa1118130:three_prime_UTR 35.0%
CTAAAGCGGAAATGTTGTGA+GGG - chr7_3:66683143-66683162 None:intergenic 40.0%
AAGTCGTTAAGGCAGTTGAA+AGG - chr7_3:66683210-66683229 None:intergenic 40.0%
! TCGAGCAACCCTCAAATTTT+AGG + chr7_3:66683516-66683535 Msa1118130:five_prime_UTR 40.0%
CCAAATACTCTTCTTTCACC+GGG - chr7_3:66683570-66683589 None:intergenic 40.0%
! TTCATATGTCGATGATGACG+AGG - chr7_3:66683605-66683624 None:intergenic 40.0%
! GATCAACGGTTGTTATTCCA+CGG + chr7_3:66683641-66683660 Msa1118130:CDS 40.0%
!! TGGTGCTAGCTTTGTTGTTT+GGG + chr7_3:66683768-66683787 Msa1118130:CDS 40.0%
! CGTCTTGTCTTATTGTTTCC+TGG + chr7_3:66684397-66684416 Msa1118130:intron 40.0%
AGTTCAACATCAAATGGAGC+AGG - chr7_3:66684451-66684470 None:intergenic 40.0%
TGTGCAATTGCTTCAACCAT+AGG - chr7_3:66684540-66684559 None:intergenic 40.0%
CAAGGTCATTGTGTTGAAGT+TGG + chr7_3:66684771-66684790 Msa1118130:CDS 40.0%
!! TGTGTTGAAGTTGGTCGTTT+TGG + chr7_3:66684780-66684799 Msa1118130:CDS 40.0%
ATCCATTCTTCAAGCAATGG+AGG + chr7_3:66684893-66684912 Msa1118130:CDS 40.0%
TTCCTCCATTGCTTGAAGAA+TGG - chr7_3:66684898-66684917 None:intergenic 40.0%
TTCTTCAAGCAATGGAGGAA+AGG + chr7_3:66684898-66684917 Msa1118130:CDS 40.0%
! GAATCAAGTAATGGTGGTGA+TGG + chr7_3:66685080-66685099 Msa1118130:CDS 40.0%
! TGGATTTGAAGTGTCAGAGT+TGG + chr7_3:66685121-66685140 Msa1118130:CDS 40.0%
AATGTGTTGTCCAATCGCTT+TGG + chr7_3:66685338-66685357 Msa1118130:CDS 40.0%
TCCAATCGCTTTGGTTACTT+AGG + chr7_3:66685347-66685366 Msa1118130:CDS 40.0%
ACCTAAGTAACCAAAGCGAT+TGG - chr7_3:66685351-66685370 None:intergenic 40.0%
ATCAGTCCATCATACGAAGA+AGG - chr7_3:66685410-66685429 None:intergenic 40.0%
GATTCGGACTCAAAATCGAT+CGG + chr7_3:66685433-66685452 Msa1118130:three_prime_UTR 40.0%
TGTTTGGTATACCAATGGGT+TGG + chr7_3:66685593-66685612 Msa1118130:three_prime_UTR 40.0%
TGTAATTTCGACCAACCCAT+TGG - chr7_3:66685607-66685626 None:intergenic 40.0%
TTGAAATTTGAGCGCATGTC+TGG - chr7_3:66685664-66685683 None:intergenic 40.0%
! TAGGTTTTGCAGCTGTTGAT+TGG + chr7_3:66685713-66685732 Msa1118130:three_prime_UTR 40.0%
TCATCTCTATCAACTACCAG+AGG - chr7_3:66685746-66685765 None:intergenic 40.0%
AGACCATATCTTGGTTGACA+TGG - chr7_3:66685854-66685873 None:intergenic 40.0%
AAGAGGCAAAGACCATATCT+TGG - chr7_3:66685863-66685882 None:intergenic 40.0%
!! TTCACTCCTTTTTCACACTG+AGG + chr7_3:66686302-66686321 Msa1118130:intron 40.0%
CACACTGAGGAAGAATAGAT+AGG + chr7_3:66686315-66686334 Msa1118130:intron 40.0%
ACTGAGGAAGAATAGATAGG+AGG + chr7_3:66686318-66686337 Msa1118130:intron 40.0%
! CATTTGAGGTTGTGTCTAAC+GGG + chr7_3:66686549-66686568 Msa1118130:intron 40.0%
GATGAGGTGACAATCAATTG+TGG - chr7_3:66687510-66687529 None:intergenic 40.0%
! GCACTTTGAAAGCAAGACAA+AGG + chr7_3:66687873-66687892 Msa1118130:intron 40.0%
! CAAAATAGTGACTTGGGCTT+TGG - chr7_3:66687956-66687975 None:intergenic 40.0%
!! CGAAATGACGTCGTTTTCAA+AGG - chr7_3:66688018-66688037 None:intergenic 40.0%
!! TTGCTACTTCTTGGTGTTTG+TGG - chr7_3:66688047-66688066 None:intergenic 40.0%
!! TGATATGGCTTGCTACTTCT+TGG - chr7_3:66688056-66688075 None:intergenic 40.0%
GTTGGAGGAACACTTTGATA+TGG - chr7_3:66688071-66688090 None:intergenic 40.0%
ATACCATTGAACATGGTTGG+AGG - chr7_3:66688086-66688105 None:intergenic 40.0%
GGTAAGGAATGCACATGATT+AGG - chr7_3:66688116-66688135 None:intergenic 40.0%
TGCAAATGTGATATGGGGTA+AGG - chr7_3:66688132-66688151 None:intergenic 40.0%
CCCCATATCACATTTGCAAA+AGG + chr7_3:66688134-66688153 Msa1118130:intron 40.0%
TCAGAGTATGTTGAACATGG+CGG + chr7_3:66689240-66689259 Msa1118130:intron 40.0%
!!! TTTTGGAGTTCAGATCATCC+TGG + chr7_3:66689306-66689325 Msa1118130:three_prime_UTR 40.0%
!! TGGTTCAGTCTTGTTCTATG+AGG - chr7_3:66689448-66689467 None:intergenic 40.0%
! TCCTTATCTCTCTTTTGCTC+CGG + chr7_3:66689476-66689495 Msa1118130:intron 40.0%
AGAGAACAAGAGTGAACCAT+TGG - chr7_3:66689503-66689522 None:intergenic 40.0%
ACATAGAAGGACACAGTTTC+TGG - chr7_3:66689816-66689835 None:intergenic 40.0%
GTGTCCTTCTATGTTCATGT+TGG + chr7_3:66689822-66689841 Msa1118130:three_prime_UTR 40.0%
!!! TGTTATTTTCAAAGGGGGTG+TGG + chr7_3:66690364-66690383 Msa1118130:intron 40.0%
!! GTTATTTTCAAAGGGGGTGT+GGG + chr7_3:66690365-66690384 Msa1118130:intron 40.0%
ATGCCCCAACCCATTATAAA+AGG - chr7_3:66690445-66690464 None:intergenic 40.0%
CAATTTGTCCCACAGTGATT+GGG - chr7_3:66690894-66690913 None:intergenic 40.0%
! TCTGCAATATTTGCTAGCAG+TGG - chr7_3:66691270-66691289 None:intergenic 40.0%
!! AATAAGTACCGTTGATAGCG+TGG + chr7_3:66691379-66691398 Msa1118130:intron 40.0%
TCAGAAAGAACAGCTTGTAG+TGG + chr7_3:66691418-66691437 Msa1118130:intron 40.0%
CTAGTCTCTTGTGCAGTTAA+GGG + chr7_3:66691441-66691460 Msa1118130:intron 40.0%
CAATTGGATCAAGCAGTTGT+GGG + chr7_3:66691471-66691490 Msa1118130:intron 40.0%
AATTGGATCAAGCAGTTGTG+GGG + chr7_3:66691472-66691491 Msa1118130:intron 40.0%
AACGTGAGTTAACTCACGTT+GGG + chr7_3:66691566-66691585 Msa1118130:intron 40.0%
TTTCAACGTGAAGTCACGTA+AGG + chr7_3:66691601-66691620 Msa1118130:intron 40.0%
TTCAACGTGAAGTCACGTAA+GGG + chr7_3:66691602-66691621 Msa1118130:intron 40.0%
! GGTAAAACCGTCTTTTCACT+TGG + chr7_3:66691623-66691642 Msa1118130:intron 40.0%
CTCATTCCCAAGTGAAAAGA+CGG - chr7_3:66691633-66691652 None:intergenic 40.0%
! GGGCTTTTCATAGCATACAT+AGG - chr7_3:66691899-66691918 None:intergenic 40.0%
GCAAGAACTTGTATGCAACA+TGG - chr7_3:66691926-66691945 None:intergenic 40.0%
! TGCTGAGTTAAGAGAAGCAT+TGG + chr7_3:66692137-66692156 Msa1118130:three_prime_UTR 40.0%
GAATTCCATGATCACTAGCA+AGG - chr7_3:66692233-66692252 None:intergenic 40.0%
GAGTACAAGCTTATTGCAAG+TGG + chr7_3:66692404-66692423 Msa1118130:three_prime_UTR 40.0%
AGCCAAAAGAACTCAAACAG+AGG - chr7_3:66692705-66692724 None:intergenic 40.0%
GCTAAAGCGGAAATGTTGTG+AGG - chr7_3:66683144-66683163 None:intergenic 45.0%
CTCGAAAAACAACAGAGTCG+CGG - chr7_3:66683501-66683520 None:intergenic 45.0%
!! CCCGGTGAAAGAAGAGTATT+TGG + chr7_3:66683567-66683586 Msa1118130:CDS 45.0%
AGGAAGTGATGAGGGATCAA+CGG + chr7_3:66683627-66683646 Msa1118130:CDS 45.0%
GTCTTTGTGAGAAATGGTGG+TGG - chr7_3:66683694-66683713 None:intergenic 45.0%
CACATAGTTTCATGGAGCAG+AGG + chr7_3:66683745-66683764 Msa1118130:CDS 45.0%
ATAGTTTCATGGAGCAGAGG+TGG + chr7_3:66683748-66683767 Msa1118130:CDS 45.0%
!! GTGGTGCTAGCTTTGTTGTT+TGG + chr7_3:66683767-66683786 Msa1118130:CDS 45.0%
!! AGGTCTCTGGAGAAAGCATT+TGG - chr7_3:66683796-66683815 None:intergenic 45.0%
GTATCTAGGAAGAAGGTCTC+TGG - chr7_3:66683809-66683828 None:intergenic 45.0%
CAACATCAAATGGAGCAGGT+AGG - chr7_3:66684447-66684466 None:intergenic 45.0%
AGGAGAAGGCCAATTGAGTA+TGG + chr7_3:66685056-66685075 Msa1118130:CDS 45.0%
!! CAAGTAATGGTGGTGATGGA+AGG + chr7_3:66685084-66685103 Msa1118130:CDS 45.0%
GGAAGGAGCAGTGTTAGATA+TGG + chr7_3:66685101-66685120 Msa1118130:CDS 45.0%
AGTGTCAGAGTTGGAAATGC+TGG + chr7_3:66685130-66685149 Msa1118130:CDS 45.0%
! AGAGTTGGAAATGCTGGCTA+TGG + chr7_3:66685136-66685155 Msa1118130:CDS 45.0%
! AATGCTGGCTATGGAAATGC+AGG + chr7_3:66685145-66685164 Msa1118130:CDS 45.0%
! ATGCTGGCTATGGAAATGCA+GGG + chr7_3:66685146-66685165 Msa1118130:CDS 45.0%
AGAGCTTGAGGAAGAGATTG+AGG + chr7_3:66685187-66685206 Msa1118130:CDS 45.0%
GTTGATTGGACAAGAACCTC+TGG + chr7_3:66685727-66685746 Msa1118130:three_prime_UTR 45.0%
GCACCATGTCAACCAAGATA+TGG + chr7_3:66685848-66685867 Msa1118130:intron 45.0%
TTGAGTGAAGATCCTGTTGG+TGG + chr7_3:66685985-66686004 Msa1118130:three_prime_UTR 45.0%
!! CTGTTGGTGGTTAACCTTGT+CGG + chr7_3:66685998-66686017 Msa1118130:three_prime_UTR 45.0%
ATGCGTCATGTTGGATGATG+AGG - chr7_3:66687526-66687545 None:intergenic 45.0%
! CTTTTGCTCATGCGTCATGT+TGG - chr7_3:66687535-66687554 None:intergenic 45.0%
!! TACTTCTTGGTGTTTGTGGC+TGG - chr7_3:66688043-66688062 None:intergenic 45.0%
GTTCCTCCAACCATGTTCAA+TGG + chr7_3:66688080-66688099 Msa1118130:intron 45.0%
GTTCATGAAGTGAAACTCGG+TGG + chr7_3:66688467-66688486 Msa1118130:intron 45.0%
!! CTCACAACATAGTGTCGCTT+TGG + chr7_3:66688667-66688686 Msa1118130:intron 45.0%
CCTTGGAGATACAAGTGAGT+CGG + chr7_3:66689416-66689435 Msa1118130:intron 45.0%
GGAGCAAAAGAGAGATAAGG+AGG - chr7_3:66689477-66689496 None:intergenic 45.0%
ACCGGAGCAAAAGAGAGATA+AGG - chr7_3:66689480-66689499 None:intergenic 45.0%
ACAAGAGTGAACCATTGGAC+CGG - chr7_3:66689498-66689517 None:intergenic 45.0%
TGGTTCACTCTTGTTCTCTG+AGG + chr7_3:66689504-66689523 Msa1118130:intron 45.0%
! AGATATAAGTGACTCGGGTC+AGG - chr7_3:66689530-66689549 None:intergenic 45.0%
! ACTCTTTGAAGGGAACGTCA+GGG + chr7_3:66689721-66689740 Msa1118130:three_prime_UTR 45.0%
!! ACAGTTTCTGGCGTAGAGAT+AGG - chr7_3:66689804-66689823 None:intergenic 45.0%
GTGGCCAACATGAACATAGA+AGG - chr7_3:66689829-66689848 None:intergenic 45.0%
! TTGGGCTAGAAGACTCGTAA+AGG - chr7_3:66690876-66690895 None:intergenic 45.0%
TCTTCTAGCCCAATCACTGT+GGG + chr7_3:66690883-66690902 Msa1118130:intron 45.0%
GCAATTTGTCCCACAGTGAT+TGG - chr7_3:66690895-66690914 None:intergenic 45.0%
GGGAATGAGCAGAAACGTTT+GGG - chr7_3:66690936-66690955 None:intergenic 45.0%
TGGGAATGAGCAGAAACGTT+TGG - chr7_3:66690937-66690956 None:intergenic 45.0%
AGCGTGAGTTAACTCTCGTA+GGG - chr7_3:66690979-66690998 None:intergenic 45.0%
TAGCGTGAGTTAACTCTCGT+AGG - chr7_3:66690980-66690999 None:intergenic 45.0%
! AACAGGAAAGGGTATGAGAC+AGG - chr7_3:66691133-66691152 None:intergenic 45.0%
!! TCTCCCAACGAATGGACTTT+TGG - chr7_3:66691301-66691320 None:intergenic 45.0%
! GCTAGTCTCTTGTGCAGTTA+AGG + chr7_3:66691440-66691459 Msa1118130:intron 45.0%
GCAATTGGATCAAGCAGTTG+TGG + chr7_3:66691470-66691489 Msa1118130:intron 45.0%
CAACGTGAGTTAACTCACGT+TGG - chr7_3:66691565-66691584 None:intergenic 45.0%
CAACGTGAGTTAACTCACGT+TGG + chr7_3:66691565-66691584 Msa1118130:intron 45.0%
TGGGAATGAGCGAAACTGTT+TGG + chr7_3:66691643-66691662 Msa1118130:intron 45.0%
GGGAATGAGCGAAACTGTTT+GGG + chr7_3:66691644-66691663 Msa1118130:intron 45.0%
GAAACTGTTTGGGTAAGAGC+AGG + chr7_3:66691654-66691673 Msa1118130:intron 45.0%
TTCTCCCTTGCTAGTGATCA+TGG + chr7_3:66692225-66692244 Msa1118130:intron 45.0%
ACCAACTGAGCTAAGCTCAT+GGG - chr7_3:66692517-66692536 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+TGG - chr7_3:66692518-66692537 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG + chr7_3:66692518-66692537 Msa1118130:three_prime_UTR 45.0%
!! TTAAAATTAACAAATAATAA+GGG - chr7_3:66683457-66683476 None:intergenic 5.0%
!!! TTTAAAATTAACAAATAATA+AGG - chr7_3:66683458-66683477 None:intergenic 5.0%
!! ATAATATATAAAGAATTATT+AGG + chr7_3:66686193-66686212 Msa1118130:intron 5.0%
!! TAATATATAAAGAATTATTA+GGG + chr7_3:66686194-66686213 Msa1118130:intron 5.0%
!! TAAAAATAATAATAATAATG+AGG - chr7_3:66689364-66689383 None:intergenic 5.0%
GAAAAACAACAGAGTCGCGG+TGG - chr7_3:66683498-66683517 None:intergenic 50.0%
! GGTTGTTATTCCACGGCCAA+TGG + chr7_3:66683648-66683667 Msa1118130:CDS 50.0%
TGTTATTCCACGGCCAATGG+AGG + chr7_3:66683651-66683670 Msa1118130:CDS 50.0%
GTTATTCCACGGCCAATGGA+GGG + chr7_3:66683652-66683671 Msa1118130:CDS 50.0%
TTATTCCACGGCCAATGGAG+GGG + chr7_3:66683653-66683672 Msa1118130:CDS 50.0%
ACTTCATGAAGCCCCTCCAT+TGG - chr7_3:66683667-66683686 None:intergenic 50.0%
ATGGAGGGGCTTCATGAAGT+AGG + chr7_3:66683667-66683686 Msa1118130:CDS 50.0%
CATCAAATGGAGCAGGTAGG+AGG - chr7_3:66684444-66684463 None:intergenic 50.0%
GCTATGGAAATGCAGGGTCT+TGG + chr7_3:66685152-66685171 Msa1118130:CDS 50.0%
GAAATGCAGGGTCTTGGAAG+AGG + chr7_3:66685158-66685177 Msa1118130:CDS 50.0%
! ACTAGTAGCGTGGTCTTGGT+TGG + chr7_3:66685458-66685477 Msa1118130:three_prime_UTR 50.0%
GTCTGGTATCGTGGTGAGTT+TGG - chr7_3:66685647-66685666 None:intergenic 50.0%
CGACAAGGTTAACCACCAAC+AGG - chr7_3:66686000-66686019 None:intergenic 50.0%
!! GTGACTTGGGCTTTGGTTTG+TGG - chr7_3:66687949-66687968 None:intergenic 50.0%
CCGACTCACTTGTATCTCCA+AGG - chr7_3:66689419-66689438 None:intergenic 50.0%
! GAGAGATAAGGAGGCTCTAG+TGG - chr7_3:66689468-66689487 None:intergenic 50.0%
! TCTCTTTTGCTCCGGTCCAA+TGG + chr7_3:66689484-66689503 Msa1118130:intron 50.0%
CTATAGGTGACATCTCCTGC+TGG + chr7_3:66689687-66689706 Msa1118130:intron 50.0%
GACATCTCCTGCTGGAAATG+TGG + chr7_3:66689695-66689714 Msa1118130:three_prime_UTR 50.0%
GAGTGTACCACATTTCCAGC+AGG - chr7_3:66689705-66689724 None:intergenic 50.0%
! CACTCTTTGAAGGGAACGTC+AGG + chr7_3:66689720-66689739 Msa1118130:three_prime_UTR 50.0%
! CTCTTTGAAGGGAACGTCAG+GGG + chr7_3:66689722-66689741 Msa1118130:three_prime_UTR 50.0%
GTCTTCTAGCCCAATCACTG+TGG + chr7_3:66690882-66690901 Msa1118130:intron 50.0%
GCGTGAGTTAACTCTCGTAG+GGG - chr7_3:66690978-66690997 None:intergenic 50.0%
AGCGTGAGTTAACTCACGCT+GGG - chr7_3:66691070-66691089 None:intergenic 50.0%
! AGGAAAGGGTATGAGACAGG+AGG - chr7_3:66691130-66691149 None:intergenic 50.0%
CCAACTGAGCTAAGCTCATG+GGG - chr7_3:66692516-66692535 None:intergenic 50.0%
GCAATGGAGGAAAGGCTACG+TGG + chr7_3:66684906-66684925 Msa1118130:CDS 55.0%
ATGCAGGGTCTTGGAAGAGG+TGG + chr7_3:66685161-66685180 Msa1118130:CDS 55.0%
!! AAGAGGTGGTGGAGAGCTTG+AGG + chr7_3:66685175-66685194 Msa1118130:CDS 55.0%
TCGATCGGACACTAGTAGCG+TGG + chr7_3:66685448-66685467 Msa1118130:three_prime_UTR 55.0%
GGACACTAGTAGCGTGGTCT+TGG + chr7_3:66685454-66685473 Msa1118130:three_prime_UTR 55.0%
! CGTGGTCTTGGTTGGCAACT+TGG + chr7_3:66685466-66685485 Msa1118130:three_prime_UTR 55.0%
TGAGCGCATGTCTGGTATCG+TGG - chr7_3:66685656-66685675 None:intergenic 55.0%
CATGGCGGTGACACCATTTC+TGG + chr7_3:66689255-66689274 Msa1118130:three_prime_UTR 55.0%
CAGCGTGAGTTAACTCACGC+TGG - chr7_3:66691069-66691088 None:intergenic 55.0%
CAGCGTGAGTTAACTCACGC+TGG + chr7_3:66691069-66691088 Msa1118130:intron 55.0%
GGATCAAGCAGTTGTGGGGA+AGG + chr7_3:66691476-66691495 Msa1118130:intron 55.0%
CCCCATGAGCTTAGCTCAGT+TGG + chr7_3:66692513-66692532 Msa1118130:three_prime_UTR 55.0%
GAGATCCGGGGTTCAAACTC+CGG + chr7_3:66692559-66692578 Msa1118130:three_prime_UTR 55.0%
TGTGACCGGAGTTTGAACCC+CGG - chr7_3:66692567-66692586 None:intergenic 55.0%
CAGGGTCTTGGAAGAGGTGG+TGG + chr7_3:66685164-66685183 Msa1118130:CDS 60.0%
TGAAGCCCCTCCATTGGCCG+TGG - chr7_3:66683661-66683680 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 66683111 66692725 66683111 ID=Msa1118130;Name=Msa1118130
chr7_3 mRNA 66683111 66692725 66683111 ID=Msa1118130-mRNA-1;Parent=Msa1118130;Name=Msa1118130-mRNA-1;_AED=0.24;_eAED=0.24;_QI=442|1|1|1|0.5|0.28|7|1270|357
chr7_3 exon 66683111 66683876 66683111 ID=Msa1118130-mRNA-1:exon:16224;Parent=Msa1118130-mRNA-1
chr7_3 exon 66684636 66685778 66684636 ID=Msa1118130-mRNA-1:exon:16225;Parent=Msa1118130-mRNA-1
chr7_3 exon 66685919 66686019 66685919 ID=Msa1118130-mRNA-1:exon:16226;Parent=Msa1118130-mRNA-1
chr7_3 exon 66689244 66689341 66689244 ID=Msa1118130-mRNA-1:exon:16227;Parent=Msa1118130-mRNA-1
chr7_3 exon 66689693 66689879 66689693 ID=Msa1118130-mRNA-1:exon:16228;Parent=Msa1118130-mRNA-1
chr7_3 exon 66692109 66692216 66692109 ID=Msa1118130-mRNA-1:exon:16229;Parent=Msa1118130-mRNA-1
chr7_3 exon 66692343 66692725 66692343 ID=Msa1118130-mRNA-1:exon:16230;Parent=Msa1118130-mRNA-1
chr7_3 five_prime_UTR 66683111 66683552 66683111 ID=Msa1118130-mRNA-1:five_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 CDS 66683553 66683876 66683553 ID=Msa1118130-mRNA-1:cds;Parent=Msa1118130-mRNA-1
chr7_3 CDS 66684636 66685385 66684636 ID=Msa1118130-mRNA-1:cds;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66685386 66685778 66685386 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66685919 66686019 66685919 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66689244 66689341 66689244 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66689693 66689879 66689693 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66692109 66692216 66692109 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
chr7_3 three_prime_UTR 66692343 66692725 66692343 ID=Msa1118130-mRNA-1:three_prime_utr;Parent=Msa1118130-mRNA-1
Gene Sequence

>Msa1118130

ATGAACTATCTCTACCCGGTGAAAGAAGAGTATTTGGAAATTGAAGCAACCTCGTCATCATCGACATATGAAAGAGGAAGTGATGAGGGATCAACGGTTGTTATTCCACGGCCAATGGAGGGGCTTCATGAAGTAGGACCACCACCATTTCTCACAAAGACATTTGATGTTGTGGAGGACCCCACAACAAGTCACATAGTTTCATGGAGCAGAGGTGGTGCTAGCTTTGTTGTTTGGGATCCAAATGCTTTCTCCAGAGACCTTCTTCCTAGATACTTCAAACACAACAATTTCTCAAGTTTTGTTAGACAACTCAACACCTATGGTTTTAGAAAAATTGATCCTGATAAATGGGAGTTTGCAAATGAAGGATTTCTAAGAGGACATAAACATCTTTTAGCAAACATTAAGAGAAGGAGACAAACTTCACAACCTAGTACTTCACAACAACAATCATCACAAGGTCATTGTGTTGAAGTTGGTCGTTTTGGATTAGACGAAGAAATCGATCATTTGAGACGTGACAAACAAGTGTTAATGATGGAACTTGTGAAGCTTAGACAGCAACAGCAGAACACAAGATCCATTCTTCAAGCAATGGAGGAAAGGCTACGTGGAACCGAAATTAAGCAGCAACAAATGATGGCTTTTTTGGCTAGAGCTATGAAAAATCCAGCTTTTATTCAGCAATTACTTCAACAGAAGGAAAAGAGAAAGGAGATTGAAGATGCTATTACTAAGAAGAGGAGAAGGCCAATTGAGTATGGAGAATCAAGTAATGGTGGTGATGGAAGGAGCAGTGTTAGATATGGATTTGAAGTGTCAGAGTTGGAAATGCTGGCTATGGAAATGCAGGGTCTTGGAAGAGGTGGTGGAGAGCTTGAGGAAGAGATTGAGGTATTTGAGACTCATGAGAAAATGAATAAAGAACTTGATGAAGGGTTTTGGGAAGAACTTTTTAGTGAGAATTTTGAGAGTGAATTAGATATTCTAACTTCTCAAGATGATGATGATGATGAAGATGTCAATGTGTTGTCCAATCGCTTTGGTTACTTAGGTTCTAGTCCGAAATAA
Protein sequence

>Msa1118130

MNYLYPVKEEYLEIEATSSSSTYERGSDEGSTVVIPRPMEGLHEVGPPPFLTKTFDVVEDPTTSHIVSWSRGGASFVVWDPNAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDKWEFANEGFLRGHKHLLANIKRRRQTSQPSTSQQQSSQGHCVEVGRFGLDEEIDHLRRDKQVLMMELVKLRQQQQNTRSILQAMEERLRGTEIKQQQMMAFLARAMKNPAFIQQLLQQKEKRKEIEDAITKKRRRPIEYGESSNGGDGRSSVRYGFEVSELEMLAMEMQGLGRGGGELEEEIEVFETHEKMNKELDEGFWEELFSENFESELDILTSQDDDDDEDVNVLSNRFGYLGSSPK*