AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036670 MtrunA17_Chr7g0261221 97.207 179 5 0 1 179 1 179 1.22e-124 348
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036670 AT2G44820.2 58.268 127 50 2 24 149 20 144 2.61e-36 125
Msa1036670 AT2G44820.1 59.677 124 47 2 27 149 42 163 3.86e-36 125

Find 76 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGAGATGAGGTTGAAAT+TGG 0.201280 7_1:+73131560 None:intergenic
ACGTTATTCAACTTCTTTAT+AGG 0.212149 7_1:-73125560 Msa1036670:three_prime_UTR
CGTATGATTCTAGGACGTTT+TGG 0.217863 7_1:-73125882 Msa1036670:CDS
ATTGGTCGTGCCACACTTAA+AGG 0.224539 7_1:+73126071 None:intergenic
TTTCATTTGTGTTAACAAAA+AGG 0.242565 7_1:+73125407 None:intergenic
TGCTTATTGTTATGTTCTCT+TGG 0.258679 7_1:+73126661 None:intergenic
AACACAGGCAGTGATGATTT+TGG 0.268752 7_1:+73131470 None:intergenic
CAACTGGAAACATGATAAAA+AGG 0.272902 7_1:-73125670 Msa1036670:CDS
AAGAGAAAATACTGAAGTTT+TGG 0.276418 7_1:+73126599 None:intergenic
GCCTTTCAGCGTATGATTCT+AGG 0.290954 7_1:-73125891 Msa1036670:intron
TGAACAACAAAAGGAGGAAT+AGG 0.325431 7_1:-73131229 Msa1036670:five_prime_UTR
CTGTATGATCTTTATAAATC+TGG 0.342433 7_1:-73125593 Msa1036670:three_prime_UTR
AATGGACATCAGGAAGATTA+TGG 0.351249 7_1:-73126629 Msa1036670:CDS
GAACTAATGCACGAAATAGA+TGG 0.358945 7_1:-73125449 Msa1036670:three_prime_UTR
GGAAGGGGAAGCGACTGGTC+AGG 0.378735 7_1:+73131346 None:intergenic
TTATAGCAAACTCGCGTTTG+AGG 0.379144 7_1:-73131427 Msa1036670:five_prime_UTR
AATGAGAACTAGAGGATAGA+TGG 0.399091 7_1:+73131267 None:intergenic
AGAGAAAGAGAGAGCATTGA+AGG 0.406638 7_1:-73131535 Msa1036670:five_prime_UTR
CACTGCCTGTGTTGTTGCAT+TGG 0.419073 7_1:-73131460 Msa1036670:five_prime_UTR
AGGAAAATGAAATGGACATC+AGG 0.425149 7_1:-73126639 Msa1036670:CDS
TTATTGTTATGTTCTCTTGG+AGG 0.434023 7_1:+73126664 None:intergenic
GAACAACAAAAGGAGGAATA+GGG 0.437611 7_1:-73131228 Msa1036670:five_prime_UTR
AACTTCAAACCTCTGTCCTC+TGG 0.439918 7_1:+73125810 None:intergenic
TGCCTGTGTTGTTGCATTGG+AGG 0.443561 7_1:-73131457 Msa1036670:five_prime_UTR
GACATGGAAAGAGCGCAAAA+AGG 0.445441 7_1:-73126260 Msa1036670:CDS
TCAATGCTCTCTCTTTCTCT+AGG 0.445760 7_1:+73131538 None:intergenic
CAATAAGCAGGAAAATGAAA+TGG 0.447339 7_1:-73126647 Msa1036670:CDS
GGTTGTTTCCCTTGGTGGGA+AGG 0.454986 7_1:-73126224 Msa1036670:intron
GATAGGAAGGTTGTTTCCCT+TGG 0.461391 7_1:-73126232 Msa1036670:CDS
TTAGAGATGAGGTTGAAATT+GGG 0.465999 7_1:+73131561 None:intergenic
ACTAGAGGATAGATGGATGT+TGG 0.474704 7_1:+73131274 None:intergenic
CCAGTGTCATGACCTCTTGT+GGG 0.477146 7_1:+73125729 None:intergenic
TCCAGTGTCATGACCTCTTG+TGG 0.479523 7_1:+73125728 None:intergenic
GAAGGGGAAGCGACTGGTCA+GGG 0.487527 7_1:+73131347 None:intergenic
GGTTGAAATTGGGCTTCAAA+AGG 0.487898 7_1:+73131571 None:intergenic
AACTAATGCACGAAATAGAT+GGG 0.488096 7_1:-73125448 Msa1036670:three_prime_UTR
GGACAAAATATGTCAAATAC+AGG 0.488097 7_1:-73125708 Msa1036670:CDS
GTGTGGCGGCGGCTGAGAGA+TGG 0.495623 7_1:+73131318 None:intergenic
GTGACTAGTGTGTGTGGCGG+CGG 0.498056 7_1:+73131307 None:intergenic
ATAGATGGATGTTGGATTGG+TGG 0.502454 7_1:+73131282 None:intergenic
AGGTAATCTTTGATTCTTGA+GGG 0.502643 7_1:+73126091 None:intergenic
CTGAGAGATGGAGGTTGGAA+GGG 0.507687 7_1:+73131330 None:intergenic
AGGATAGATGGATGTTGGAT+TGG 0.508202 7_1:+73131279 None:intergenic
AATAGGGAAAACGAAATTGA+AGG 0.509739 7_1:-73131212 Msa1036670:intron
GCTGAGAGATGGAGGTTGGA+AGG 0.517895 7_1:+73131329 None:intergenic
TGAGAGATGGAGGTTGGAAG+GGG 0.517966 7_1:+73131331 None:intergenic
AAGAAACAAGCTCACGGACG+TGG 0.521086 7_1:-73126688 Msa1036670:CDS
AAGGTAATCTTTGATTCTTG+AGG 0.525330 7_1:+73126090 None:intergenic
GGAAGGTTGTTTCCCTTGGT+GGG 0.530525 7_1:-73126228 Msa1036670:CDS
ATCAAATAAATGAGAACTAG+AGG 0.533664 7_1:+73131259 None:intergenic
AAGAGAACATAACAATAAGC+AGG 0.534086 7_1:-73126659 Msa1036670:CDS
CTTTCTCTAGGTTAGAGATG+AGG 0.535468 7_1:+73131550 None:intergenic
AGGAAGGTTGTTTCCCTTGG+TGG 0.540449 7_1:-73126229 Msa1036670:CDS
TTCTATTGAACAACAAAAGG+AGG 0.543428 7_1:-73131235 Msa1036670:five_prime_UTR
GCGTTTGAGGCTACGAGACT+CGG 0.558128 7_1:-73131414 Msa1036670:five_prime_UTR
GGCGGCTGAGAGATGGAGGT+TGG 0.560293 7_1:+73131325 None:intergenic
TAAAGAAGTTGAATAACGTA+AGG 0.562313 7_1:+73125564 None:intergenic
GATGGATGTTGGATTGGTGG+TGG 0.585879 7_1:+73131285 None:intergenic
AGGTTGGAAGGGGAAGCGAC+TGG 0.591488 7_1:+73131341 None:intergenic
TTGAAGTCAACACCCACAAG+AGG 0.593893 7_1:-73125741 Msa1036670:CDS
TCAAAGATTACCTTTAAGTG+TGG 0.597312 7_1:-73126081 Msa1036670:CDS
GGTAATCTTTGATTCTTGAG+GGG 0.603282 7_1:+73126092 None:intergenic
AAGGGGAAGCGACTGGTCAG+GGG 0.616975 7_1:+73131348 None:intergenic
CCCACAAGAGGTCATGACAC+TGG 0.625320 7_1:-73125729 Msa1036670:CDS
TAGGCAACTCGCATATGACA+TGG 0.625414 7_1:-73126276 Msa1036670:CDS
AGACCTCACCTTCCCACCAA+GGG 0.627792 7_1:+73126216 None:intergenic
TGGCGGCGGCTGAGAGATGG+AGG 0.631330 7_1:+73131321 None:intergenic
AGAGGTTTGAAGTTAAGTGA+AGG 0.641153 7_1:-73125801 Msa1036670:CDS
ATCCTCCAATGCAACAACAC+AGG 0.641863 7_1:+73131455 None:intergenic
TACAAGAAGAAACAAGCTCA+CGG 0.651983 7_1:-73126694 Msa1036670:CDS
GTGGTGACTAGTGTGTGTGG+CGG 0.658560 7_1:+73131304 None:intergenic
TAGACCTCACCTTCCCACCA+AGG 0.660546 7_1:+73126215 None:intergenic
ACTAATGCACGAAATAGATG+GGG 0.669882 7_1:-73125447 Msa1036670:three_prime_UTR
AGCTGGAAAACACAAACCAG+AGG 0.689560 7_1:-73125826 Msa1036670:CDS
GTGGTGGTGACTAGTGTGTG+TGG 0.710488 7_1:+73131301 None:intergenic
AAACACAAACCAGAGGACAG+AGG 0.717192 7_1:-73125819 Msa1036670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTTATTTATAATAAA+AGG + chr7_1:73127927-73127946 None:intergenic 0.0%
!! TATTATTTATTTATAATAAA+AGG + chr7_1:73127927-73127946 None:intergenic 0.0%
!!! TTTTTTTTTATTTTAAACCA+AGG - chr7_1:73126648-73126667 Msa1036670:CDS 10.0%
!! ATTGTAAGATAATAAAAATT+AGG + chr7_1:73127482-73127501 None:intergenic 10.0%
!! TATGTATATTATTTAGATTT+AGG - chr7_1:73129285-73129304 Msa1036670:intron 10.0%
!!! TCATTTCATTATTTTAAATT+TGG - chr7_1:73130601-73130620 Msa1036670:intron 10.0%
!!! CATTTCATTATTTTAAATTT+GGG - chr7_1:73130602-73130621 Msa1036670:intron 10.0%
!!! ATTTCATTATTTTAAATTTG+GGG - chr7_1:73130603-73130622 Msa1036670:intron 10.0%
!!! TAATAATTGTTGCTTAATAT+TGG - chr7_1:73125990-73126009 Msa1036670:intron 15.0%
!!! TTTTTGTTTTTATGAAATAG+CGG + chr7_1:73126331-73126350 None:intergenic 15.0%
!! AAACAAAAACAACAAAAATA+AGG - chr7_1:73126342-73126361 Msa1036670:intron 15.0%
!! TTGTTAAACAAAAAAATAAC+AGG - chr7_1:73126519-73126538 Msa1036670:intron 15.0%
!!! AATGATTTTTTCATCAAAAA+TGG - chr7_1:73127087-73127106 Msa1036670:intron 15.0%
!! TAAAAAAAATCCAAAACAAA+CGG - chr7_1:73127162-73127181 Msa1036670:intron 15.0%
!!! TTTTTATTATCTTACAATCA+AGG - chr7_1:73127484-73127503 Msa1036670:intron 15.0%
!! TTTATTTATAATAAAAGGCA+AGG + chr7_1:73127922-73127941 None:intergenic 15.0%
!! TGTGTTTGTTTAAAAAATAA+AGG + chr7_1:73127959-73127978 None:intergenic 15.0%
!! TTTATTTATAATAAAAGGCA+AGG + chr7_1:73127922-73127941 None:intergenic 15.0%
!!! TACTGTTTTTGTAAAATAAA+AGG + chr7_1:73128038-73128057 None:intergenic 15.0%
!!! TACTATATTAGTTTATGTTT+TGG - chr7_1:73128448-73128467 Msa1036670:intron 15.0%
!! TACTACAATATACAATATAT+AGG + chr7_1:73128594-73128613 None:intergenic 15.0%
!! TTGAATAAACTAAACTAATA+AGG + chr7_1:73129348-73129367 None:intergenic 15.0%
!!! TGATTTTATGCTTTATTATT+GGG + chr7_1:73129787-73129806 None:intergenic 15.0%
!!! ATTTTCTATTGAACAACAAA+AGG - chr7_1:73125749-73125768 Msa1036670:CDS 20.0%
!! TTTCTCTTAAAATGAAATAG+CGG - chr7_1:73126683-73126702 Msa1036670:CDS 20.0%
!! AGATTTCCATTTGATTATTA+TGG - chr7_1:73126853-73126872 Msa1036670:intron 20.0%
!! GATTTCCATTTGATTATTAT+GGG - chr7_1:73126854-73126873 Msa1036670:intron 20.0%
!! AAAAAAAATCCAAAACAAAC+GGG - chr7_1:73127163-73127182 Msa1036670:intron 20.0%
!!! TGATTTATAAGAAGGTATTT+CGG + chr7_1:73127858-73127877 None:intergenic 20.0%
!! AAAGTAAGTGATTTATAAGA+AGG + chr7_1:73127866-73127885 None:intergenic 20.0%
!! TTGTTTAAAAAATAAAGGCA+AGG + chr7_1:73127954-73127973 None:intergenic 20.0%
!!! TTTTTGTAAAATAAAAGGCA+AGG + chr7_1:73128033-73128052 None:intergenic 20.0%
!!! TAAAGTTTAGTTCTGTTATT+TGG - chr7_1:73128362-73128381 Msa1036670:intron 20.0%
!! CTAATATAGTATATGAAGTT+TGG + chr7_1:73128439-73128458 None:intergenic 20.0%
!!! TATGTTTTGGATGAATTAAT+TGG - chr7_1:73128461-73128480 Msa1036670:intron 20.0%
!!! TAATATTTTGAGCATACAAA+TGG + chr7_1:73128926-73128945 None:intergenic 20.0%
!! TATTATTATGCAAAGTTGTA+TGG - chr7_1:73128941-73128960 Msa1036670:intron 20.0%
!! TTGTTATGTTATGTATTGTT+AGG - chr7_1:73129232-73129251 Msa1036670:intron 20.0%
!!! ATTTTATCCATAATTTCTCT+GGG + chr7_1:73129455-73129474 None:intergenic 20.0%
!! AGAAATTATGGATAAAATCT+TGG - chr7_1:73129457-73129476 Msa1036670:intron 20.0%
!! GAAATTATGGATAAAATCTT+GGG - chr7_1:73129458-73129477 Msa1036670:intron 20.0%
!! AAATTATGGATAAAATCTTG+GGG - chr7_1:73129459-73129478 Msa1036670:intron 20.0%
!! TATAAGATTGATATTGAATG+CGG - chr7_1:73129485-73129504 Msa1036670:intron 20.0%
!!! GTGATTTTATGCTTTATTAT+TGG + chr7_1:73129788-73129807 None:intergenic 20.0%
!! TAAAGGAAAAAAATCAACTT+AGG + chr7_1:73130013-73130032 None:intergenic 20.0%
!! AAATGAATGATTTAAAAGCT+TGG + chr7_1:73130164-73130183 None:intergenic 20.0%
!!! TTTCAATTTTCAGTTACTAT+GGG - chr7_1:73130263-73130282 Msa1036670:intron 20.0%
!! TGTTGGAGTTAAATAATTTA+TGG - chr7_1:73130626-73130645 Msa1036670:intron 20.0%
!!! TGTTACCTTCTTTTTTATAA+TGG - chr7_1:73130668-73130687 Msa1036670:intron 20.0%
!! CAAAAATAGAACAAGATAAA+AGG + chr7_1:73131473-73131492 None:intergenic 20.0%
!!! TTCTATTTTTGTTTGTATAC+TGG - chr7_1:73131482-73131501 Msa1036670:intron 20.0%
! ATCAAATAAATGAGAACTAG+AGG + chr7_1:73125731-73125750 None:intergenic 25.0%
! CAATTAGATAAGAAGAGATA+AGG + chr7_1:73125818-73125837 None:intergenic 25.0%
!!! CTTGTTTTAGTGAAAATAAG+TGG - chr7_1:73126093-73126112 Msa1036670:CDS 25.0%
!! GTTTTATATGAACAAAACAG+AGG - chr7_1:73126386-73126405 Msa1036670:intron 25.0%
! AACTAGAACAAAAAAGTAAC+AGG - chr7_1:73126479-73126498 Msa1036670:intron 25.0%
! AGAAAATACAAAATTGTCCT+TGG + chr7_1:73126668-73126687 None:intergenic 25.0%
!! CACTTGAGAAAAATAGATTT+TGG - chr7_1:73127026-73127045 Msa1036670:intron 25.0%
!! TGAAATAGCTTTTCATTTTG+AGG - chr7_1:73127059-73127078 Msa1036670:intron 25.0%
! CAAACACTACAAATACAAAA+AGG - chr7_1:73127130-73127149 Msa1036670:intron 25.0%
!! TATTCGCATTTTTATCATGT+TGG - chr7_1:73127241-73127260 Msa1036670:intron 25.0%
!! ATTCGCATTTTTATCATGTT+GGG - chr7_1:73127242-73127261 Msa1036670:intron 25.0%
! TTGAATTACTTCATGATAGT+AGG - chr7_1:73127371-73127390 Msa1036670:intron 25.0%
! TAATGAGTTATGTTGTGAAA+AGG - chr7_1:73127413-73127432 Msa1036670:intron 25.0%
! TAGAAATCTTATCTCTTGTT+TGG - chr7_1:73127817-73127836 Msa1036670:intron 25.0%
!! AGAAATCTTATCTCTTGTTT+GGG - chr7_1:73127818-73127837 Msa1036670:intron 25.0%
! TATTTGGATGAAATTTAGAC+AGG - chr7_1:73128378-73128397 Msa1036670:intron 25.0%
! AATATGGAAAATAGTACATG+AGG + chr7_1:73128525-73128544 None:intergenic 25.0%
!! ATGTACTATTTTCCATATTC+TGG - chr7_1:73128526-73128545 Msa1036670:intron 25.0%
! AATAAATGCGTAAACAGATT+AGG - chr7_1:73128673-73128692 Msa1036670:intron 25.0%
! ACCAAGAATATAAGTTGTTA+AGG - chr7_1:73128708-73128727 Msa1036670:intron 25.0%
! CCAAGAATATAAGTTGTTAA+GGG - chr7_1:73128709-73128728 Msa1036670:intron 25.0%
!! TCTTGATTTTCTTCTTAACA+TGG + chr7_1:73128878-73128897 None:intergenic 25.0%
! ATTAATGCAACAATCATAAG+AGG + chr7_1:73128969-73128988 None:intergenic 25.0%
! GATCTGAAAACAATAACAAT+GGG + chr7_1:73129090-73129109 None:intergenic 25.0%
! TGATCTGAAAACAATAACAA+TGG + chr7_1:73129091-73129110 None:intergenic 25.0%
! GGAATATTGTAAATTGATAC+CGG + chr7_1:73129434-73129453 None:intergenic 25.0%
!! GATTTTATCCATAATTTCTC+TGG + chr7_1:73129456-73129475 None:intergenic 25.0%
! TTGAATATAGTAGAAGCAAA+AGG + chr7_1:73129735-73129754 None:intergenic 25.0%
!! TATGCTTTATTATTGGGATT+TGG + chr7_1:73129781-73129800 None:intergenic 25.0%
!!! CTCATTTTTACAATAGTGTA+GGG + chr7_1:73129881-73129900 None:intergenic 25.0%
!!! TCTCATTTTTACAATAGTGT+AGG + chr7_1:73129882-73129901 None:intergenic 25.0%
! ACACTATTGTAAAAATGAGA+AGG - chr7_1:73129882-73129901 Msa1036670:intron 25.0%
! CACTATTGTAAAAATGAGAA+GGG - chr7_1:73129883-73129902 Msa1036670:intron 25.0%
! ACTATTGTAAAAATGAGAAG+GGG - chr7_1:73129884-73129903 Msa1036670:intron 25.0%
! CTATTCAACTACTAGATTAA+AGG + chr7_1:73130030-73130049 None:intergenic 25.0%
!!! CTTATTTCTATTTAGTCAAG+AGG - chr7_1:73130100-73130119 Msa1036670:intron 25.0%
!!! CAAGTTTTGTTTTTGTTTGT+GGG - chr7_1:73130218-73130237 Msa1036670:intron 25.0%
!! CTTTCAATTTTCAGTTACTA+TGG - chr7_1:73130262-73130281 Msa1036670:intron 25.0%
!! AAGAGAAAATACTGAAGTTT+TGG + chr7_1:73130391-73130410 None:intergenic 25.0%
! TGATAAGAACGAATTTGAAT+TGG - chr7_1:73130547-73130566 Msa1036670:intron 25.0%
!!! TTATTTTAAATTTGGGGTGT+TGG - chr7_1:73130609-73130628 Msa1036670:intron 25.0%
! AGTAGCCATTATAAAAAAGA+AGG + chr7_1:73130676-73130695 None:intergenic 25.0%
! TACTCATTGCAATATATCTT+AGG - chr7_1:73130692-73130711 Msa1036670:intron 25.0%
!!! TGTTTTTGTTTCTTCATCAT+TGG + chr7_1:73130937-73130956 None:intergenic 25.0%
! TGATAGAATTAATTACCTCT+TGG + chr7_1:73130978-73130997 None:intergenic 25.0%
! TGTTGTACAAACAAATAAAG+AGG + chr7_1:73131005-73131024 None:intergenic 25.0%
! AGGAATTATAAGAAAGTAAG+TGG + chr7_1:73131025-73131044 None:intergenic 25.0%
! TCAAATACAGGAAAAAGAAA+AGG - chr7_1:73131291-73131310 Msa1036670:five_prime_UTR 25.0%
! AACTGGAAACATGATAAAAA+GGG - chr7_1:73131318-73131337 Msa1036670:five_prime_UTR 25.0%
! CTGTATGATCTTTATAAATC+TGG - chr7_1:73131394-73131413 Msa1036670:five_prime_UTR 25.0%
! TAAAGAAGTTGAATAACGTA+AGG + chr7_1:73131426-73131445 None:intergenic 25.0%
! ACGTTATTCAACTTCTTTAT+AGG - chr7_1:73131427-73131446 Msa1036670:five_prime_UTR 25.0%
TTAGAGATGAGGTTGAAATT+GGG + chr7_1:73125429-73125448 None:intergenic 30.0%
! TTGGTTTCACTGATCAATTT+TGG + chr7_1:73125501-73125520 None:intergenic 30.0%
TTCTATTGAACAACAAAAGG+AGG - chr7_1:73125752-73125771 Msa1036670:CDS 30.0%
AATAGGGAAAACGAAATTGA+AGG - chr7_1:73125775-73125794 Msa1036670:CDS 30.0%
! AAATAAGTGGTTTGAGACTT+AGG - chr7_1:73126106-73126125 Msa1036670:intron 30.0%
ATCTTACTAGCATTAAACTG+AGG - chr7_1:73126157-73126176 Msa1036670:intron 30.0%
GTTGCCATATTAGTTAATAG+CGG - chr7_1:73126258-73126277 Msa1036670:CDS 30.0%
CTATCCGCTATTAACTAATA+TGG + chr7_1:73126265-73126284 None:intergenic 30.0%
GTTTAACAATCTCAAAACTC+TGG + chr7_1:73126508-73126527 None:intergenic 30.0%
! GTAAATTTTCCTCTACTTTG+TGG + chr7_1:73126560-73126579 None:intergenic 30.0%
!!! TTTTTGCCATTTTTATGGTC+AGG - chr7_1:73127593-73127612 Msa1036670:intron 30.0%
AAGAAGAGAAACACTGTATA+AGG - chr7_1:73127699-73127718 Msa1036670:intron 30.0%
AGAAGAGAAACACTGTATAA+GGG - chr7_1:73127700-73127719 Msa1036670:intron 30.0%
TATAAGGGAAGATGTAATCA+AGG - chr7_1:73127715-73127734 Msa1036670:intron 30.0%
!! TAAGAAGGTATTTCGGTATT+GGG + chr7_1:73127851-73127870 None:intergenic 30.0%
!! ATAAGAAGGTATTTCGGTAT+TGG + chr7_1:73127852-73127871 None:intergenic 30.0%
TAAAGTTGGGAAATGTAACA+CGG + chr7_1:73128213-73128232 None:intergenic 30.0%
CAATAGAGTGATAGAAATTG+AGG - chr7_1:73128291-73128310 Msa1036670:intron 30.0%
!!! GGTTTTAAATAGACGAAGAA+TGG - chr7_1:73128482-73128501 Msa1036670:intron 30.0%
! ACTATTTTCCATATTCTGGA+TGG - chr7_1:73128530-73128549 Msa1036670:intron 30.0%
CCCTTAACAACTTATATTCT+TGG + chr7_1:73128712-73128731 None:intergenic 30.0%
TGTTGCATTAATGTTAGTGT+TGG - chr7_1:73128977-73128996 Msa1036670:intron 30.0%
TTAGACTGTATCTGATGATT+AGG - chr7_1:73129012-73129031 Msa1036670:intron 30.0%
TCCATAACAGAGTTATTCAT+CGG + chr7_1:73129138-73129157 None:intergenic 30.0%
! TTTTTGAACTACTTCGAGAT+AGG - chr7_1:73129258-73129277 Msa1036670:intron 30.0%
GTTTATTCAAATTCCAACAG+TGG - chr7_1:73129358-73129377 Msa1036670:intron 30.0%
TGGTTTAAGCTTGTAACTAA+AGG - chr7_1:73129378-73129397 Msa1036670:intron 30.0%
CAATATTCCCAGAGAAATTA+TGG - chr7_1:73129445-73129464 Msa1036670:intron 30.0%
! ATAGGTCACTATTAGTTTAG+TGG - chr7_1:73129522-73129541 Msa1036670:intron 30.0%
ACTATTAGTAATGTGGCAAA+TGG - chr7_1:73129615-73129634 Msa1036670:intron 30.0%
ATGAGTCATAAGGTTCAAAA+GGG + chr7_1:73129652-73129671 None:intergenic 30.0%
AATGAGTCATAAGGTTCAAA+AGG + chr7_1:73129653-73129672 None:intergenic 30.0%
! TGAACCTTATGACTCATTTT+AGG - chr7_1:73129655-73129674 Msa1036670:intron 30.0%
! GAACCTTATGACTCATTTTA+GGG - chr7_1:73129656-73129675 Msa1036670:intron 30.0%
CAAGATAGAAGTTCAAAAGA+TGG + chr7_1:73129703-73129722 None:intergenic 30.0%
! GGAAAATTCTAAAAACTGAC+TGG + chr7_1:73129760-73129779 None:intergenic 30.0%
CTATTGTAAAAATGAGAAGG+GGG - chr7_1:73129885-73129904 Msa1036670:intron 30.0%
!! TGGCACATTATTTCACTTTT+AGG - chr7_1:73129979-73129998 Msa1036670:intron 30.0%
!! GGCACATTATTTCACTTTTA+GGG - chr7_1:73129980-73129999 Msa1036670:intron 30.0%
TGTTGTATGTATCTATCACA+TGG - chr7_1:73130050-73130069 Msa1036670:intron 30.0%
CCACAAACAAAAACAAAACT+TGG + chr7_1:73130220-73130239 None:intergenic 30.0%
!!! CCAAGTTTTGTTTTTGTTTG+TGG - chr7_1:73130217-73130236 Msa1036670:intron 30.0%
TTATTGTTATGTTCTCTTGG+AGG + chr7_1:73130326-73130345 None:intergenic 30.0%
TGCTTATTGTTATGTTCTCT+TGG + chr7_1:73130329-73130348 None:intergenic 30.0%
AAGAGAACATAACAATAAGC+AGG - chr7_1:73130328-73130347 Msa1036670:intron 30.0%
CAATAAGCAGGAAAATGAAA+TGG - chr7_1:73130340-73130359 Msa1036670:intron 30.0%
AAAAAAGAAGGTAACAAACC+AGG + chr7_1:73130664-73130683 None:intergenic 30.0%
TATCGTGTTCTATTTGCAAA+TGG - chr7_1:73130817-73130836 Msa1036670:intron 30.0%
AGGTAATCTTTGATTCTTGA+GGG + chr7_1:73130899-73130918 None:intergenic 30.0%
AAGGTAATCTTTGATTCTTG+AGG + chr7_1:73130900-73130919 None:intergenic 30.0%
TCAAAGATTACCTTTAAGTG+TGG - chr7_1:73130906-73130925 Msa1036670:intron 30.0%
TGATGAAGAAACAAAAACAG+AGG - chr7_1:73130938-73130957 Msa1036670:intron 30.0%
GATGAAGAAACAAAAACAGA+GGG - chr7_1:73130939-73130958 Msa1036670:intron 30.0%
GTACAAACAAATAAAGAGGA+GGG + chr7_1:73131001-73131020 None:intergenic 30.0%
TGTACAAACAAATAAAGAGG+AGG + chr7_1:73131002-73131021 None:intergenic 30.0%
AAGTAAGTGGTACGTATATA+AGG + chr7_1:73131045-73131064 None:intergenic 30.0%
! AGTGAAGGTCGATTTAAAAA+TGG - chr7_1:73131201-73131220 Msa1036670:intron 30.0%
GGACAAAATATGTCAAATAC+AGG - chr7_1:73131279-73131298 Msa1036670:five_prime_UTR 30.0%
AATACAGGAAAAAGAAAAGG+AGG - chr7_1:73131294-73131313 Msa1036670:five_prime_UTR 30.0%
CAACTGGAAACATGATAAAA+AGG - chr7_1:73131317-73131336 Msa1036670:five_prime_UTR 30.0%
AACTAATGCACGAAATAGAT+GGG - chr7_1:73131539-73131558 Msa1036670:five_prime_UTR 30.0%
GTTAGAGATGAGGTTGAAAT+TGG + chr7_1:73125430-73125449 None:intergenic 35.0%
AATGAGAACTAGAGGATAGA+TGG + chr7_1:73125723-73125742 None:intergenic 35.0%
TGAACAACAAAAGGAGGAAT+AGG - chr7_1:73125758-73125777 Msa1036670:CDS 35.0%
GAACAACAAAAGGAGGAATA+GGG - chr7_1:73125759-73125778 Msa1036670:CDS 35.0%
! TATCCCGCTATAGCATTTTT+GGG + chr7_1:73126292-73126311 None:intergenic 35.0%
TAGAGGAAAATTTACAGCAG+AGG - chr7_1:73126565-73126584 Msa1036670:intron 35.0%
ACGCACCCATAATAATCAAA+TGG + chr7_1:73126862-73126881 None:intergenic 35.0%
TATTATGGGTGCGTTTGTTT+CGG - chr7_1:73126868-73126887 Msa1036670:intron 35.0%
ATTCCTTCCTATAGGCTTAT+TGG + chr7_1:73127335-73127354 None:intergenic 35.0%
TGAAGTCAATTCCTTCCTAT+AGG + chr7_1:73127343-73127362 None:intergenic 35.0%
!! GAAAAGGATTAGCTCAACTT+AGG - chr7_1:73127429-73127448 Msa1036670:intron 35.0%
!! GGATTGTTTAGCTCTAAAGA+AGG - chr7_1:73127450-73127469 Msa1036670:intron 35.0%
!!! GGTCGTTTTTGCCATTTTTA+TGG - chr7_1:73127588-73127607 Msa1036670:intron 35.0%
AACATAAGGAAAAAACGTGC+TGG - chr7_1:73127635-73127654 Msa1036670:intron 35.0%
ACATAAGGAAAAAACGTGCT+GGG - chr7_1:73127636-73127655 Msa1036670:intron 35.0%
! TTACAACTTTTCCCTTGAGT+GGG - chr7_1:73128177-73128196 Msa1036670:intron 35.0%
AGTTCTTACATAGGTTCGAT+CGG + chr7_1:73128250-73128269 None:intergenic 35.0%
CTATTGTAAGCAATGTAGTC+AGG + chr7_1:73128277-73128296 None:intergenic 35.0%
GGTACTTATCAGATGAAGAA+TGG - chr7_1:73128399-73128418 Msa1036670:intron 35.0%
TGGAAAATAGTACATGAGGT+AGG + chr7_1:73128521-73128540 None:intergenic 35.0%
ACAGGTTAATAGACGAACAA+TGG - chr7_1:73128557-73128576 Msa1036670:intron 35.0%
TCAAAAGACAAATGCGACTT+GGG + chr7_1:73128743-73128762 None:intergenic 35.0%
TTAAATGTGAGCAGAAGAGT+CGG - chr7_1:73128785-73128804 Msa1036670:intron 35.0%
TATCCAACTTATTCACCTGT+CGG + chr7_1:73128837-73128856 None:intergenic 35.0%
TCTTCTTAACATGGATAAGC+CGG + chr7_1:73128869-73128888 None:intergenic 35.0%
AAACAATAACAATGGGAGTG+AGG + chr7_1:73129083-73129102 None:intergenic 35.0%
AACACGTACACATAGGTAAA+AGG - chr7_1:73129110-73129129 Msa1036670:intron 35.0%
AAGGTAGCTCAAGTTTACTT+GGG + chr7_1:73129329-73129348 None:intergenic 35.0%
TAAGGTAGCTCAAGTTTACT+TGG + chr7_1:73129330-73129349 None:intergenic 35.0%
TTACAAGCTTAAACCACTGT+TGG + chr7_1:73129374-73129393 None:intergenic 35.0%
TAACTAAAGGCTGAAATTGC+TGG - chr7_1:73129391-73129410 Msa1036670:intron 35.0%
! ACTATTAGTTTAGTGGTGGA+TGG - chr7_1:73129529-73129548 Msa1036670:intron 35.0%
GGTACAGTAATGGTTTGAAT+TGG - chr7_1:73129550-73129569 Msa1036670:intron 35.0%
ATGGTTTGAATTGGAGTTGA+TGG - chr7_1:73129559-73129578 Msa1036670:intron 35.0%
ACTGGTCACTATTAGTAATG+TGG - chr7_1:73129608-73129627 Msa1036670:intron 35.0%
AGACCCTAAAATGAGTCATA+AGG + chr7_1:73129662-73129681 None:intergenic 35.0%
ATAGTAGAAGCAAAAGGCAA+AGG + chr7_1:73129729-73129748 None:intergenic 35.0%
AAACACATCAGAAGAGCAAA+TGG + chr7_1:73130190-73130209 None:intergenic 35.0%
TTGAAAGAGAGAAGACGTAA+GGG + chr7_1:73130249-73130268 None:intergenic 35.0%
ATTGAAAGAGAGAAGACGTA+AGG + chr7_1:73130250-73130269 None:intergenic 35.0%
TACAAGAAGAAACAAGCTCA+CGG - chr7_1:73130293-73130312 Msa1036670:intron 35.0%
AGGAAAATGAAATGGACATC+AGG - chr7_1:73130348-73130367 Msa1036670:intron 35.0%
AATGGACATCAGGAAGATTA+TGG - chr7_1:73130358-73130377 Msa1036670:intron 35.0%
AGAAGATAGACAACATTCAG+TGG + chr7_1:73130439-73130458 None:intergenic 35.0%
TTATGGTAAGCATATTCACC+TGG - chr7_1:73130643-73130662 Msa1036670:intron 35.0%
CAAAAAGGTTGAAGATAGGA+AGG - chr7_1:73130742-73130761 Msa1036670:intron 35.0%
TGAATAAGAGCAGATGAACA+CGG + chr7_1:73130874-73130893 None:intergenic 35.0%
GGTAATCTTTGATTCTTGAG+GGG + chr7_1:73130898-73130917 None:intergenic 35.0%
!!! GTATGATTCTAGGACGTTTT+GGG - chr7_1:73131106-73131125 Msa1036670:intron 35.0%
!!! TATGATTCTAGGACGTTTTG+GGG - chr7_1:73131107-73131126 Msa1036670:intron 35.0%
! AGAGGTTTGAAGTTAAGTGA+AGG - chr7_1:73131186-73131205 Msa1036670:intron 35.0%
TGGAAACATGATAAAAAGGG+TGG - chr7_1:73131321-73131340 Msa1036670:five_prime_UTR 35.0%
AAACATGATAAAAAGGGTGG+TGG - chr7_1:73131324-73131343 Msa1036670:five_prime_UTR 35.0%
!!! GACCTTCTTTTTTTGACGTT+TGG - chr7_1:73131510-73131529 Msa1036670:intron 35.0%
CACCAAACGTCAAAAAAAGA+AGG + chr7_1:73131515-73131534 None:intergenic 35.0%
GAACTAATGCACGAAATAGA+TGG - chr7_1:73131538-73131557 Msa1036670:five_prime_UTR 35.0%
ACTAATGCACGAAATAGATG+GGG - chr7_1:73131540-73131559 Msa1036670:five_prime_UTR 35.0%
GGTTGAAATTGGGCTTCAAA+AGG + chr7_1:73125419-73125438 None:intergenic 40.0%
CTTTCTCTAGGTTAGAGATG+AGG + chr7_1:73125440-73125459 None:intergenic 40.0%
TCAATGCTCTCTCTTTCTCT+AGG + chr7_1:73125452-73125471 None:intergenic 40.0%
!! AGAGAAAGAGAGAGCATTGA+AGG - chr7_1:73125452-73125471 Msa1036670:three_prime_UTR 40.0%
! AACACAGGCAGTGATGATTT+TGG + chr7_1:73125520-73125539 None:intergenic 40.0%
TTATAGCAAACTCGCGTTTG+AGG - chr7_1:73125560-73125579 Msa1036670:three_prime_UTR 40.0%
! ATAGATGGATGTTGGATTGG+TGG + chr7_1:73125708-73125727 None:intergenic 40.0%
AGGATAGATGGATGTTGGAT+TGG + chr7_1:73125711-73125730 None:intergenic 40.0%
ACTAGAGGATAGATGGATGT+TGG + chr7_1:73125716-73125735 None:intergenic 40.0%
GTTAGCTACGTTGTGAATTG+CGG + chr7_1:73125930-73125949 None:intergenic 40.0%
! GGTTTGAGACTTAGGTTAGA+TGG - chr7_1:73126114-73126133 Msa1036670:intron 40.0%
ACTAGCATTAAACTGAGGAG+AGG - chr7_1:73126162-73126181 Msa1036670:intron 40.0%
! GAGAGGTGAGTTTTTCTGAT+TGG - chr7_1:73126179-73126198 Msa1036670:intron 40.0%
TTGTTGAAGTGTGTGTACTG+TGG + chr7_1:73126213-73126232 None:intergenic 40.0%
GTCTGCTTCCATTAGTAGAA+TGG - chr7_1:73126234-73126253 Msa1036670:CDS 40.0%
! ATCCCGCTATAGCATTTTTG+GGG + chr7_1:73126291-73126310 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG + chr7_1:73126293-73126312 None:intergenic 40.0%
! CAGAAACAGAGAGAGCATAA+TGG - chr7_1:73126430-73126449 Msa1036670:intron 40.0%
! AGAGAGAGCATAATGGAGTT+TGG - chr7_1:73126437-73126456 Msa1036670:intron 40.0%
CTACAATCTACAGACCCTAT+GGG + chr7_1:73127189-73127208 None:intergenic 40.0%
TCTACAATCTACAGACCCTA+TGG + chr7_1:73127190-73127209 None:intergenic 40.0%
ATCTTACAATCAAGGTAGCC+AGG - chr7_1:73127492-73127511 Msa1036670:intron 40.0%
CTCGATCCTGACCATAAAAA+TGG + chr7_1:73127602-73127621 None:intergenic 40.0%
GTTTCTGCAGCAGAAACATA+AGG - chr7_1:73127621-73127640 Msa1036670:intron 40.0%
!!! TCTTTTATTTTGACCCGACC+TGG + chr7_1:73127671-73127690 None:intergenic 40.0%
!!! CTTGTTTTCTGTTTCTGCTG+CGG - chr7_1:73127748-73127767 Msa1036670:intron 40.0%
GAAGAGGACTCAGTCAAATT+AGG - chr7_1:73127785-73127804 Msa1036670:intron 40.0%
! TTATCTCTTGTTTGGGCCTA+AGG - chr7_1:73127825-73127844 Msa1036670:intron 40.0%
! GTTACAACTTTTCCCTTGAG+TGG - chr7_1:73128176-73128195 Msa1036670:intron 40.0%
TCAGGAACGAGTTCTTACAT+AGG + chr7_1:73128259-73128278 None:intergenic 40.0%
CTGTCAATCCATCCAGAATA+TGG + chr7_1:73128541-73128560 None:intergenic 40.0%
!! CATATTCTGGATGGATTGAC+AGG - chr7_1:73128539-73128558 Msa1036670:intron 40.0%
GTCAAAAGACAAATGCGACT+TGG + chr7_1:73128744-73128763 None:intergenic 40.0%
TTTATTACAGCCTTACCGAC+AGG - chr7_1:73128819-73128838 Msa1036670:intron 40.0%
AACTTATTCACCTGTCGGTA+AGG + chr7_1:73128832-73128851 None:intergenic 40.0%
TTACCGACAGGTGAATAAGT+TGG - chr7_1:73128831-73128850 Msa1036670:intron 40.0%
GTGAGGTCTACTTATTTCAG+TGG + chr7_1:73129066-73129085 None:intergenic 40.0%
TCAGATCAACACGTACACAT+AGG - chr7_1:73129103-73129122 Msa1036670:intron 40.0%
GCCGATGAATAACTCTGTTA+TGG - chr7_1:73129134-73129153 Msa1036670:intron 40.0%
! GGTCACTATTAGTTTAGTGG+TGG - chr7_1:73129525-73129544 Msa1036670:intron 40.0%
!! GTTTGAATTGGAGTTGATGG+TGG - chr7_1:73129562-73129581 Msa1036670:intron 40.0%
CCAAGTATTTCGACATCGAT+CGG + chr7_1:73129962-73129981 None:intergenic 40.0%
GTCGTAGTACATGTATGAAG+AGG - chr7_1:73130137-73130156 Msa1036670:intron 40.0%
TGAAAGAGAGAAGACGTAAG+GGG + chr7_1:73130248-73130267 None:intergenic 40.0%
AGCGCAAAAAGGTTGAAGAT+AGG - chr7_1:73130738-73130757 Msa1036670:intron 40.0%
GAAGAAACAAAAACAGAGGG+AGG - chr7_1:73130942-73130961 Msa1036670:intron 40.0%
GCACAAGTGGTACGTATATA+AGG + chr7_1:73131078-73131097 None:intergenic 40.0%
TCCTAGAATCATACGCTGAA+AGG + chr7_1:73131100-73131119 None:intergenic 40.0%
!!! CGTATGATTCTAGGACGTTT+TGG - chr7_1:73131105-73131124 Msa1036670:intron 40.0%
!!! ATGATTCTAGGACGTTTTGG+GGG - chr7_1:73131108-73131127 Msa1036670:intron 40.0%
GAAAAAGAAAAGGAGGCAAC+TGG - chr7_1:73131301-73131320 Msa1036670:five_prime_UTR 40.0%
! TAAAAAGGGTGGTGGTAAGA+AGG - chr7_1:73131332-73131351 Msa1036670:five_prime_UTR 40.0%
ATCCTCCAATGCAACAACAC+AGG + chr7_1:73125535-73125554 None:intergenic 45.0%
TGGCAACGCCATTCTACTAA+TGG + chr7_1:73126245-73126264 None:intergenic 45.0%
CAGCCCCAAAAATGCTATAG+CGG - chr7_1:73126285-73126304 Msa1036670:intron 45.0%
AGCCCCAAAAATGCTATAGC+GGG - chr7_1:73126286-73126305 Msa1036670:intron 45.0%
TAGCAAACGCCACAAAGTAG+AGG - chr7_1:73126548-73126567 Msa1036670:intron 45.0%
ACAGAACAGCTGAAAAGCAG+AGG - chr7_1:73126600-73126619 Msa1036670:intron 45.0%
ACGCCCATAGTAGTCAATAG+CGG + chr7_1:73126809-73126828 None:intergenic 45.0%
! ATCAAGGTCGTAGCTCGTTT+TGG + chr7_1:73127565-73127584 None:intergenic 45.0%
! GTATTTCGGTATTGGGCCTT+AGG + chr7_1:73127844-73127863 None:intergenic 45.0%
GTTCGTAAGAACCCACTCAA+GGG + chr7_1:73128191-73128210 None:intergenic 45.0%
TGGTGAAGGGACGTAAAGTT+GGG + chr7_1:73128226-73128245 None:intergenic 45.0%
!! TGTCAACTGCTGATTCTGAC+AGG - chr7_1:73128616-73128635 Msa1036670:intron 45.0%
AAGTTGGATATCCTCACGTC+CGG - chr7_1:73128847-73128866 Msa1036670:intron 45.0%
! GCGGTTGATGTTAGAGTGAT+AGG - chr7_1:73129504-73129523 Msa1036670:intron 45.0%
!! AGTGGTGGATGGTACAGTAA+TGG - chr7_1:73129540-73129559 Msa1036670:intron 45.0%
!! GAGTTGATGGTGGTTGAATG+TGG - chr7_1:73129572-73129591 Msa1036670:intron 45.0%
!! TGATGGTGGTTGAATGTGGT+TGG - chr7_1:73129576-73129595 Msa1036670:intron 45.0%
!! TGTGGTTGGTGTTGAGTAAC+TGG - chr7_1:73129590-73129609 Msa1036670:intron 45.0%
CCGATCGATGTCGAAATACT+TGG - chr7_1:73129959-73129978 Msa1036670:intron 45.0%
TAGGCAACTCGCATATGACA+TGG - chr7_1:73130711-73130730 Msa1036670:intron 45.0%
! GACATGGAAAGAGCGCAAAA+AGG - chr7_1:73130727-73130746 Msa1036670:intron 45.0%
! GATAGGAAGGTTGTTTCCCT+TGG - chr7_1:73130755-73130774 Msa1036670:intron 45.0%
ATTGGTCGTGCCACACTTAA+AGG + chr7_1:73130919-73130938 None:intergenic 45.0%
GGAGGAAAAAATGCTCCAAG+AGG - chr7_1:73130960-73130979 Msa1036670:intron 45.0%
GCCTTTCAGCGTATGATTCT+AGG - chr7_1:73131096-73131115 Msa1036670:intron 45.0%
AGCAGCAGTAAAAAACCAGC+TGG - chr7_1:73131144-73131163 Msa1036670:intron 45.0%
!! TCTGGTTTGTGTTTTCCAGC+TGG + chr7_1:73131162-73131181 None:intergenic 45.0%
AGCTGGAAAACACAAACCAG+AGG - chr7_1:73131161-73131180 Msa1036670:intron 45.0%
AAACACAAACCAGAGGACAG+AGG - chr7_1:73131168-73131187 Msa1036670:intron 45.0%
AACTTCAAACCTCTGTCCTC+TGG + chr7_1:73131180-73131199 None:intergenic 45.0%
TTGAAGTCAACACCCACAAG+AGG - chr7_1:73131246-73131265 Msa1036670:five_prime_UTR 45.0%
!! ATTATTAAAATCAAAATTAT+TGG - chr7_1:73126037-73126056 Msa1036670:CDS 5.0%
!! AAAATAAAAAAAAAAAACAA+GGG + chr7_1:73126642-73126661 None:intergenic 5.0%
!! TAAAATAAAAAAAAAAAACA+AGG + chr7_1:73126643-73126662 None:intergenic 5.0%
! CACTGCCTGTGTTGTTGCAT+TGG - chr7_1:73125527-73125546 Msa1036670:three_prime_UTR 50.0%
! TGCCTGTGTTGTTGCATTGG+AGG - chr7_1:73125530-73125549 Msa1036670:three_prime_UTR 50.0%
TGAGAGATGGAGGTTGGAAG+GGG + chr7_1:73125659-73125678 None:intergenic 50.0%
CTGAGAGATGGAGGTTGGAA+GGG + chr7_1:73125660-73125679 None:intergenic 50.0%
!! GATGGATGTTGGATTGGTGG+TGG + chr7_1:73125705-73125724 None:intergenic 50.0%
! AACGCTTCGTAGCGGTTTTG+CGG + chr7_1:73126716-73126735 None:intergenic 50.0%
TATCTCACACCGCAACGCTA+TGG - chr7_1:73126743-73126762 Msa1036670:intron 50.0%
! CGGCCGCTATTGACTACTAT+GGG - chr7_1:73126803-73126822 Msa1036670:intron 50.0%
! TACTATGGGCGTTGCAGCTT+CGG - chr7_1:73126817-73126836 Msa1036670:intron 50.0%
TCCAAAACAAACGGGCCCAT+AGG - chr7_1:73127171-73127190 Msa1036670:intron 50.0%
CCAAAACAAACGGGCCCATA+GGG - chr7_1:73127172-73127191 Msa1036670:intron 50.0%
CGGCCAATAAGCCTATAGGA+AGG - chr7_1:73127329-73127348 Msa1036670:intron 50.0%
!! AGGTCGTAGCTCGTTTTGGT+GGG + chr7_1:73127561-73127580 None:intergenic 50.0%
! AAGGTCGTAGCTCGTTTTGG+TGG + chr7_1:73127562-73127581 None:intergenic 50.0%
AACGAGCTACGACCTTGATC+TGG - chr7_1:73127566-73127585 Msa1036670:intron 50.0%
ACGAGCTACGACCTTGATCT+GGG - chr7_1:73127567-73127586 Msa1036670:intron 50.0%
GGCAAAAACGACCCAGATCA+AGG + chr7_1:73127581-73127600 None:intergenic 50.0%
GGTTCGTAAGAACCCACTCA+AGG + chr7_1:73128192-73128211 None:intergenic 50.0%
CTGGTGAAGGGACGTAAAGT+TGG + chr7_1:73128227-73128246 None:intergenic 50.0%
CTTACATAGGTTCGATCGGC+TGG + chr7_1:73128246-73128265 None:intergenic 50.0%
TGTGAGCAGAAGAGTCGGAA+AGG - chr7_1:73128790-73128809 Msa1036670:intron 50.0%
! CAGAAGAGTCGGAAAGGTAC+TGG - chr7_1:73128796-73128815 Msa1036670:intron 50.0%
AAGAAACAAGCTCACGGACG+TGG - chr7_1:73130299-73130318 Msa1036670:intron 50.0%
! AGGAAGGTTGTTTCCCTTGG+TGG - chr7_1:73130758-73130777 Msa1036670:intron 50.0%
! GGAAGGTTGTTTCCCTTGGT+GGG - chr7_1:73130759-73130778 Msa1036670:intron 50.0%
! CATACGCTGAAAGGCACAAG+TGG + chr7_1:73131091-73131110 None:intergenic 50.0%
!!! TCTAGGACGTTTTGGGGGAA+AGG - chr7_1:73131113-73131132 Msa1036670:intron 50.0%
CCAGTGTCATGACCTCTTGT+GGG + chr7_1:73131261-73131280 None:intergenic 50.0%
TCCAGTGTCATGACCTCTTG+TGG + chr7_1:73131262-73131281 None:intergenic 50.0%
! GCGTTTGAGGCTACGAGACT+CGG - chr7_1:73125573-73125592 Msa1036670:three_prime_UTR 55.0%
GCTGAGAGATGGAGGTTGGA+AGG + chr7_1:73125661-73125680 None:intergenic 55.0%
GTGGTGACTAGTGTGTGTGG+CGG + chr7_1:73125686-73125705 None:intergenic 55.0%
! GTGGTGGTGACTAGTGTGTG+TGG + chr7_1:73125689-73125708 None:intergenic 55.0%
AGCGTTGCGGTGTGAGATAG+CGG + chr7_1:73126742-73126761 None:intergenic 55.0%
CGCAACAAGCCATAGCGTTG+CGG + chr7_1:73126755-73126774 None:intergenic 55.0%
! GCGGCCGCTATTGACTACTA+TGG - chr7_1:73126802-73126821 Msa1036670:intron 55.0%
! CCCTATGGGCCCGTTTGTTT+TGG + chr7_1:73127175-73127194 None:intergenic 55.0%
GTGTGTGTGTGTGCATGCTG+CGG - chr7_1:73127309-73127328 Msa1036670:intron 55.0%
GCTGCGGCCAATAAGCCTAT+AGG - chr7_1:73127325-73127344 Msa1036670:intron 55.0%
ATCGTGCGATCCTACGTGCT+GGG + chr7_1:73127525-73127544 None:intergenic 55.0%
CTGGGCTCTACAAACCAGGT+CGG - chr7_1:73127654-73127673 Msa1036670:intron 55.0%
TGGGCTCTACAAACCAGGTC+GGG - chr7_1:73127655-73127674 Msa1036670:intron 55.0%
CTGAGTCCTCTTCTTCCCCA+TGG + chr7_1:73127778-73127797 None:intergenic 55.0%
AGGTTCGATCGGCTGGTGAA+GGG + chr7_1:73128239-73128258 None:intergenic 55.0%
TAGGTTCGATCGGCTGGTGA+AGG + chr7_1:73128240-73128259 None:intergenic 55.0%
ACATGGATAAGCCGGACGTG+AGG + chr7_1:73128861-73128880 None:intergenic 55.0%
! GGTTGTTTCCCTTGGTGGGA+AGG - chr7_1:73130763-73130782 Msa1036670:intron 55.0%
TTTCCCTTGGTGGGAAGGTG+AGG - chr7_1:73130768-73130787 Msa1036670:intron 55.0%
AGACCTCACCTTCCCACCAA+GGG + chr7_1:73130774-73130793 None:intergenic 55.0%
TAGACCTCACCTTCCCACCA+AGG + chr7_1:73130775-73130794 None:intergenic 55.0%
!!! GGACGTTTTGGGGGAAAGGA+TGG - chr7_1:73131117-73131136 Msa1036670:intron 55.0%
!!! CGTTTTGGGGGAAAGGATGG+TGG - chr7_1:73131120-73131139 Msa1036670:intron 55.0%
CCCACAAGAGGTCATGACAC+TGG - chr7_1:73131258-73131277 Msa1036670:five_prime_UTR 55.0%
! AAGGGGAAGCGACTGGTCAG+GGG + chr7_1:73125642-73125661 None:intergenic 60.0%
! GAAGGGGAAGCGACTGGTCA+GGG + chr7_1:73125643-73125662 None:intergenic 60.0%
AGGTTGGAAGGGGAAGCGAC+TGG + chr7_1:73125649-73125668 None:intergenic 60.0%
GTGACTAGTGTGTGTGGCGG+CGG + chr7_1:73125683-73125702 None:intergenic 60.0%
!! TGGCTTGTTGCGTAGCGCTC+CGG - chr7_1:73126763-73126782 Msa1036670:intron 60.0%
AGTAGTCAATAGCGGCCGCG+CGG + chr7_1:73126801-73126820 None:intergenic 60.0%
! TGGGCGTTGCAGCTTCGGTT+TGG - chr7_1:73126822-73126841 Msa1036670:intron 60.0%
TACGTGCTGGGACTCGATCC+TGG + chr7_1:73127513-73127532 None:intergenic 60.0%
AGGATCGAGTCCCAGCACGT+AGG - chr7_1:73127512-73127531 Msa1036670:intron 60.0%
GATCGTGCGATCCTACGTGC+TGG + chr7_1:73127526-73127545 None:intergenic 60.0%
CGTGCTGGGCTCTACAAACC+AGG - chr7_1:73127650-73127669 Msa1036670:intron 60.0%
TTTCTGCTGCGGCGCTCCAT+GGG - chr7_1:73127759-73127778 Msa1036670:intron 60.0%
! GGAAGGGGAAGCGACTGGTC+AGG + chr7_1:73125644-73125663 None:intergenic 65.0%
GGCGGCTGAGAGATGGAGGT+TGG + chr7_1:73125665-73125684 None:intergenic 65.0%
AGCGGCGCAACGCTTCGTAG+CGG + chr7_1:73126724-73126743 None:intergenic 65.0%
GTTTCTGCTGCGGCGCTCCA+TGG - chr7_1:73127758-73127777 Msa1036670:intron 65.0%
TTCTGCTGCGGCGCTCCATG+GGG - chr7_1:73127760-73127779 Msa1036670:intron 65.0%
GGCGCTCCATGGGGAAGAAG+AGG - chr7_1:73127769-73127788 Msa1036670:intron 65.0%
TGGCGGCGGCTGAGAGATGG+AGG + chr7_1:73125669-73125688 None:intergenic 70.0%
GTGTGGCGGCGGCTGAGAGA+TGG + chr7_1:73125672-73125691 None:intergenic 70.0%
TCAATAGCGGCCGCGCGGTG+CGG + chr7_1:73126796-73126815 None:intergenic 70.0%
! CGCGCGGTGCGGTGCGGTGC+CGG + chr7_1:73126785-73126804 None:intergenic 85.0%
! CGGCACCGCACCGCACCGCG+CGG - chr7_1:73126783-73126802 Msa1036670:intron 85.0%
! AGCGGCCGCGCGGTGCGGTG+CGG + chr7_1:73126791-73126810 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 73125415 73131594 73125415 ID=Msa1036670;Name=Msa1036670
chr7_1 mRNA 73125415 73131594 73125415 ID=Msa1036670-mRNA-1;Parent=Msa1036670;Name=Msa1036670-mRNA-1;_AED=0.21;_eAED=0.21;_QI=367|1|1|1|0.6|0.66|6|226|179
chr7_1 exon 73125415 73125904 73125415 ID=Msa1036670-mRNA-1:exon:17961;Parent=Msa1036670-mRNA-1
chr7_1 exon 73126028 73126114 73126028 ID=Msa1036670-mRNA-1:exon:17960;Parent=Msa1036670-mRNA-1
chr7_1 exon 73126225 73126295 73126225 ID=Msa1036670-mRNA-1:exon:17959;Parent=Msa1036670-mRNA-1
chr7_1 exon 73126611 73126733 73126611 ID=Msa1036670-mRNA-1:exon:17958;Parent=Msa1036670-mRNA-1
chr7_1 exon 73131213 73131497 73131213 ID=Msa1036670-mRNA-1:exon:17957;Parent=Msa1036670-mRNA-1
chr7_1 exon 73131518 73131594 73131518 ID=Msa1036670-mRNA-1:exon:17956;Parent=Msa1036670-mRNA-1
chr7_1 five_prime_UTR 73131518 73131594 73131518 ID=Msa1036670-mRNA-1:five_prime_utr;Parent=Msa1036670-mRNA-1
chr7_1 five_prime_UTR 73131213 73131497 73131213 ID=Msa1036670-mRNA-1:five_prime_utr;Parent=Msa1036670-mRNA-1
chr7_1 five_prime_UTR 73126729 73126733 73126729 ID=Msa1036670-mRNA-1:five_prime_utr;Parent=Msa1036670-mRNA-1
chr7_1 CDS 73126611 73126728 73126611 ID=Msa1036670-mRNA-1:cds;Parent=Msa1036670-mRNA-1
chr7_1 CDS 73126225 73126295 73126225 ID=Msa1036670-mRNA-1:cds;Parent=Msa1036670-mRNA-1
chr7_1 CDS 73126028 73126114 73126028 ID=Msa1036670-mRNA-1:cds;Parent=Msa1036670-mRNA-1
chr7_1 CDS 73125641 73125904 73125641 ID=Msa1036670-mRNA-1:cds;Parent=Msa1036670-mRNA-1
chr7_1 three_prime_UTR 73125415 73125640 73125415 ID=Msa1036670-mRNA-1:three_prime_utr;Parent=Msa1036670-mRNA-1
Gene Sequence

>Msa1036670

ATGGGAAAGATGTACAAGAAGAAACAAGCTCACGGACGTGGACCTCCAAGAGAACATAACAATAAGCAGGAAAATGAAATGGACATCAGGAAGATTATGGAAGACGTCCAAAACTTCAGCAACTCGCATATGACATGGAAAGAGCGCAAAAAGGTTGAAGATAGGAAGGTTGTTTCCCTTGGTGGGAAGCCCCTCAAGAATCAAAGATTACCTTTAAGTGTGGCACGACCAATGATGAAGAAACAAAAACAGAGGGAGGAAAAAATGCTCCAAGAGCGTATGATTCTAGGACGTTTTGGGGGAAAGGATGGTGGTAGCAGCAGTAAAAAACCAGCTGGAAAACACAAACCAGAGGACAGAGGTTTGAAGTTAAGTGAAGGTCGATTTAAAAATGGCATACTCGACGTGAAGCATTTGTTGAAGTCAACACCCACAAGAGGTCATGACACTGGACAAAATATGTCAAATACAGGAAAAAGAAAAGGAGGCAACTGGAAACATGATAAAAAGGGTGGTGGTAAGAAGGATCAAATGTTTTAG
Protein sequence

>Msa1036670

MGKMYKKKQAHGRGPPREHNNKQENEMDIRKIMEDVQNFSNSHMTWKERKKVEDRKVVSLGGKPLKNQRLPLSVARPMMKKQKQREEKMLQERMILGRFGGKDGGSSSKKPAGKHKPEDRGLKLSEGRFKNGILDVKHLLKSTPTRGHDTGQNMSNTGKRKGGNWKHDKKGGGKKDQMF*