AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1039290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039290 MtrunA17_Chr1g0182341 92.157 408 8 1 1 408 1 384 0.0 779
Msa1039290 MtrunA17_Chr1g0172731 43.990 391 197 5 24 406 30 406 4.26e-111 332
Msa1039290 MtrunA17_Chr1g0190171 43.734 391 198 5 24 406 30 406 1.65e-110 330
Msa1039290 MtrunA17_Chr7g0267201 81.176 170 31 1 67 236 1 169 8.05e-101 297
Msa1039290 MtrunA17_Chr6g0477141 42.899 345 179 6 34 372 114 446 7.51e-91 282
Msa1039290 MtrunA17_Chr6g0478531 37.602 367 207 5 49 405 27 381 5.03e-82 256
Msa1039290 MtrunA17_Chr7g0226311 39.093 353 187 8 57 401 6 338 1.04e-76 241
Msa1039290 MtrunA17_Chr2g0321401 48.101 237 112 3 24 257 29 257 6.02e-75 234
Msa1039290 MtrunA17_Chr8g0334561 45.992 237 117 3 24 257 30 258 3.66e-73 229
Msa1039290 MtrunA17_Chr8g0391981 35.933 359 205 5 17 374 34 368 1.65e-63 209
Msa1039290 MtrunA17_Chr2g0285471 48.980 196 89 3 65 257 2 189 4.97e-61 196
Msa1039290 MtrunA17_Chr1g0207391 35.275 309 186 5 45 351 73 369 3.66e-60 201
Msa1039290 MtrunA17_Chr1g0154421 35.032 157 94 2 14 170 1 149 1.46e-21 90.5
Msa1039290 MtrunA17_Chr4g0018411 33.544 158 84 4 254 405 9 151 5.08e-20 86.3
Msa1039290 MtrunA17_Chr3g0140031 42.683 82 46 1 26 107 32 112 2.63e-16 74.7
Msa1039290 MtrunA17_Chr2g0327851 25.168 298 190 9 70 352 12 291 7.89e-15 75.1
Msa1039290 MtrunA17_Chr2g0327831 23.214 336 220 9 48 362 35 353 1.82e-14 74.3
Msa1039290 MtrunA17_Chr1g0212591 22.945 292 185 6 76 353 90 355 4.63e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1039290 AT5G41980.1 32.982 379 217 7 36 406 17 366 1.25e-64 211
Msa1039290 AT1G43722.1 37.261 314 173 8 16 315 16 319 1.07e-57 192
Msa1039290 AT5G28730.1 39.091 220 101 4 56 274 19 206 1.89e-42 151
Msa1039290 AT3G30525.1 41.071 168 92 3 181 342 1 167 2.61e-35 128
Msa1039290 AT5G35695.1 36.296 135 72 2 219 351 25 147 7.64e-24 99.0
Msa1039290 AT5G28950.1 41.758 91 53 0 160 250 8 98 2.08e-20 87.4
Msa1039290 AT4G10890.3 44.565 92 49 2 230 320 71 161 3.59e-17 84.0
Msa1039290 AT4G10890.1 44.565 92 49 2 230 320 71 161 3.59e-17 84.0
Msa1039290 AT4G10890.2 44.565 92 49 2 230 320 71 161 3.59e-17 84.0
Msa1039290 AT4G29780.1 23.510 302 190 7 65 350 217 493 2.10e-11 65.9
Msa1039290 AT3G63270.1 23.129 294 200 7 65 344 69 350 3.02e-11 65.1

Find 252 sgRNAs with CRISPR-Local

Find 343 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAAGTATGCACTTTAT+TGG 0.147840 7_1:+76430796 Msa1039290:CDS
ACAATATTGCTGCTTTATTA+TGG 0.184612 7_1:+76432120 Msa1039290:CDS
TTAAACAGGTAGATATTATT+TGG 0.193414 7_1:+76431680 Msa1039290:intron
CTGCTTTATTATGGAATAAT+AGG 0.193429 7_1:+76432129 Msa1039290:CDS
AGCTAGTTAAATCAACATTT+TGG 0.197799 7_1:+76432229 Msa1039290:three_prime_UTR
CAGCTATAATAACATCAATT+TGG 0.198792 7_1:-76431917 None:intergenic
TTGCTATGGGTGCTTCTAAT+AGG 0.216724 7_1:+76431081 Msa1039290:CDS
GTAAAGTTCATTAGAATAAA+TGG 0.218391 7_1:+76429934 Msa1039290:five_prime_UTR
AGAGAGCGCTTTCAACATTC+TGG 0.223219 7_1:+76431110 Msa1039290:CDS
TCATCATTAGGTATGTAATT+TGG 0.226168 7_1:-76432011 None:intergenic
AGTTGGTGCTCATGTTATTA+TGG 0.238124 7_1:+76430752 Msa1039290:exon
CTAGGCTTTGTTGCTTGTTT+TGG 0.239909 7_1:+76432815 Msa1039290:three_prime_UTR
CAGGAATACATGCAGCTATA+TGG 0.259794 7_1:-76431405 None:intergenic
CCTATCTGGTGTGTTTAGTT+TGG 0.272419 7_1:+76432886 Msa1039290:three_prime_UTR
TTTGCTTGATTCGTTGATTC+CGG 0.279644 7_1:+76432717 Msa1039290:three_prime_UTR
GCTGAATGCAGTAGCATCTA+TGG 0.281504 7_1:-76433169 None:intergenic
CGAGTTGGTGGATGAGTTAC+AGG 0.296232 7_1:+76432618 Msa1039290:three_prime_UTR
TCCACAGGTTGAACCAATTC+AGG 0.302798 7_1:-76430391 None:intergenic
AATTGAAAAGTTGGATCCTT+TGG 0.304490 7_1:-76431224 None:intergenic
AGATATTATTTGGTTGATAA+AGG 0.305824 7_1:+76431690 Msa1039290:CDS
CTTTGGAAGTTTCTGAAGTA+TGG 0.306549 7_1:+76430075 Msa1039290:five_prime_UTR
CTATCTGGTGTGTTTAGTTT+GGG 0.311634 7_1:+76432887 Msa1039290:three_prime_UTR
GGCCTCAAGTAATGATAAAA+TGG 0.311908 7_1:+76429849 Msa1039290:five_prime_UTR
AGATGAATGTGCCCGGTTAA+AGG 0.318956 7_1:-76431808 None:intergenic
TTGTGTGGCACACGGCGTTT+TGG 0.319948 7_1:+76432541 Msa1039290:three_prime_UTR
GTTGGTCCTTGTCCTGCTAT+AGG 0.322439 7_1:+76433044 Msa1039290:three_prime_UTR
ACCATATATCCCTCTTTATC+AGG 0.331108 7_1:-76431717 None:intergenic
TTGGTTATCTGTTGTGGTAC+TGG 0.332869 7_1:+76432376 Msa1039290:three_prime_UTR
GCTGTTAGCGTGGGGCTGTT+TGG 0.336709 7_1:+76432863 Msa1039290:three_prime_UTR
TAACTAATGTTTAATATTTG+AGG 0.341000 7_1:-76433106 None:intergenic
GTGTGTTTAGTTTGGGCTGC+TGG 0.341431 7_1:+76432894 Msa1039290:three_prime_UTR
GACGTGGATCATCATTTAAA+TGG 0.341822 7_1:+76429956 Msa1039290:five_prime_UTR
AGAGTTTGTTGCACCCTCTA+TGG 0.342483 7_1:+76430366 Msa1039290:five_prime_UTR
CAGCACCACCTCACACAAAC+AGG 0.343421 7_1:-76432841 None:intergenic
TCAACTGTCATTCTCTTACT+TGG 0.344249 7_1:-76431029 None:intergenic
GGTGATTTGCAATCAAAATA+TGG 0.344321 7_1:+76430999 Msa1039290:CDS
TTTCTGAAGTATGGTGAAAC+TGG 0.344481 7_1:+76430084 Msa1039290:five_prime_UTR
GTGGGGCTGTTTGGCCTATC+TGG 0.345937 7_1:+76432872 Msa1039290:three_prime_UTR
TCCTGATAAAGAGGGATATA+TGG 0.351237 7_1:+76431716 Msa1039290:CDS
CAACTAAGCTTTCCTGTAAC+AGG 0.356024 7_1:-76430120 None:intergenic
GAAAGACAAGAGGGAAGATC+AGG 0.361958 7_1:+76432068 Msa1039290:CDS
CTATAAGCTCAAACGCTACT+TGG 0.369170 7_1:-76429124 None:intergenic
ACCCTCTATGGATCCTGAAT+TGG 0.374643 7_1:+76430378 Msa1039290:five_prime_UTR
ATGCTCAAGAAGCCTTTAAC+CGG 0.377607 7_1:+76431796 Msa1039290:CDS
TTTGATGACAATTATGCAAC+TGG 0.378059 7_1:+76430340 Msa1039290:five_prime_UTR
CACAACTGTTTAAATAAAGT+TGG 0.379578 7_1:-76430975 None:intergenic
TGAAGAAAGATTGGCGACTT+TGG 0.383779 7_1:+76430058 Msa1039290:five_prime_UTR
TTAGGATGGGATCCTGTTAC+AGG 0.384207 7_1:+76430108 Msa1039290:five_prime_UTR
GTGGTAGAAGTAGGGGCTAC+AGG 0.390412 7_1:+76431177 Msa1039290:CDS
CTTCGTATGGTCTGTTCTGC+AGG 0.391162 7_1:+76432313 Msa1039290:three_prime_UTR
TGCTATGGGTGCTTCTAATA+GGG 0.391538 7_1:+76431082 Msa1039290:CDS
TTGCTTGATTCGTTGATTCC+GGG 0.392358 7_1:+76432718 Msa1039290:three_prime_UTR
TGATGGCCTCTTCAAAATCT+TGG 0.394926 7_1:-76429990 None:intergenic
CTCATTCTGCAGATTAAAGT+TGG 0.397123 7_1:+76430735 Msa1039290:five_prime_UTR
GGTACTGGTATCTCAGTCTT+AGG 0.397432 7_1:+76432761 Msa1039290:three_prime_UTR
GTGTGTTTGCGGTTTGGTCT+AGG 0.399026 7_1:+76432797 Msa1039290:three_prime_UTR
AGCTATAATAACATCAATTT+GGG 0.405985 7_1:-76431916 None:intergenic
AGGCTTCTTGAGCATTAGTT+GGG 0.406495 7_1:-76431788 None:intergenic
ATCCTTCGATTGAGGAATAC+TGG 0.409014 7_1:+76430308 Msa1039290:five_prime_UTR
CATACCTAATGATGAACTTC+CGG 0.414539 7_1:+76432019 Msa1039290:CDS
AGTTGTATAGAAAGATCATT+TGG 0.415602 7_1:+76431837 Msa1039290:CDS
AAGGCTTCTTGAGCATTAGT+TGG 0.417338 7_1:-76431789 None:intergenic
AGAGTTTAATAGTTTGAATC+CGG 0.417864 7_1:+76432588 Msa1039290:three_prime_UTR
TGTTTCACATTTATATCAGT+TGG 0.418325 7_1:+76431505 Msa1039290:CDS
GTTACGCATTTCCTTTGTCT+TGG 0.419924 7_1:-76432099 None:intergenic
GATTGTATTGGATGTATTGA+TGG 0.421287 7_1:+76431379 Msa1039290:CDS
AGCAATTAGTGGTAGAAGTA+GGG 0.424578 7_1:+76431169 Msa1039290:CDS
ACAGGTTATGTCGTGGCGTT+GGG 0.424774 7_1:+76432636 Msa1039290:three_prime_UTR
TACAGGTTATGTCGTGGCGT+TGG 0.426738 7_1:+76432635 Msa1039290:three_prime_UTR
ATGTATGACTTCACTTCAAA+GGG 0.430678 7_1:+76430884 Msa1039290:CDS
AAGGCATTCATACATCGAAC+AGG 0.430858 7_1:-76430942 None:intergenic
ATAATACCATCTGGTGGCTT+CGG 0.431622 7_1:-76431595 None:intergenic
ATGTATGAATGCCTTTAGAA+TGG 0.435269 7_1:+76430950 Msa1039290:CDS
CTCTATTATTGAGCTTCGTA+TGG 0.437152 7_1:+76432300 Msa1039290:three_prime_UTR
CAAAACAACCAAAACAGCAC+AGG 0.441141 7_1:-76432345 None:intergenic
AGGAATACATGCAGCTATAT+GGG 0.442404 7_1:-76431404 None:intergenic
CGTAGCCTGCTGGTGTGGTT+TGG 0.445129 7_1:+76432966 Msa1039290:three_prime_UTR
ATATCCGGAAGTTCATCATT+AGG 0.445538 7_1:-76432023 None:intergenic
GCGGTTGTGTGTTTGCGGTT+TGG 0.446259 7_1:+76432791 Msa1039290:three_prime_UTR
TTGCTGCTGCCGTAGCCTGC+TGG 0.446426 7_1:+76432956 Msa1039290:three_prime_UTR
CACATTTATATCAGTTGGAT+GGG 0.449515 7_1:+76431510 Msa1039290:CDS
GAGAATGACAGTTGAAGAGA+AGG 0.450583 7_1:+76431037 Msa1039290:CDS
GAGGAATAAGAAAATTTGTA+AGG 0.453171 7_1:+76432509 Msa1039290:three_prime_UTR
CCCACCTCATTCATAAAATT+AGG 0.455879 7_1:-76430559 None:intergenic
GAGAGCGCTTTCAACATTCT+GGG 0.456542 7_1:+76431111 Msa1039290:CDS
TCCACCAACTCGGCCACCTC+CGG 0.456965 7_1:-76432607 None:intergenic
CCACTGGTAATTAATTACTA+AGG 0.457034 7_1:+76433080 Msa1039290:three_prime_UTR
TTTGCCCCTTGGGAGTGTGC+TGG 0.458762 7_1:+76432475 Msa1039290:three_prime_UTR
AATCATCATTATGAGATTGA+TGG 0.460371 7_1:+76430460 Msa1039290:five_prime_UTR
TTTAATGGTGTTGGATCCCA+AGG 0.461434 7_1:+76432694 Msa1039290:three_prime_UTR
TCACATTTATATCAGTTGGA+TGG 0.462172 7_1:+76431509 Msa1039290:CDS
AAGCAATTAGTGGTAGAAGT+AGG 0.463003 7_1:+76431168 Msa1039290:CDS
ATTTGTGTATACACTTGCTA+TGG 0.464770 7_1:+76431067 Msa1039290:CDS
GGTGGTGCTGCTGTTAGCGT+GGG 0.465370 7_1:+76432854 Msa1039290:three_prime_UTR
ACAACTGTTTAAATAAAGTT+GGG 0.470278 7_1:-76430974 None:intergenic
GCGGTACATGCCTTATTTCA+AGG 0.470711 7_1:+76431274 Msa1039290:CDS
GAACTTCCGGATATTGTTGA+TGG 0.471308 7_1:+76432032 Msa1039290:CDS
GATATTGTTGATGGTTATCA+AGG 0.472958 7_1:+76432041 Msa1039290:CDS
CATGTGCCTACCCAAGGTCT+TGG 0.473985 7_1:+76430589 Msa1039290:five_prime_UTR
TTTCTGCAGCAAGAAGGGTT+TGG 0.474065 7_1:+76432401 Msa1039290:three_prime_UTR
TAGATACTATGAAGAAAGAT+TGG 0.475774 7_1:+76430049 Msa1039290:five_prime_UTR
TATGTCGTGGCGTTGGGCGT+TGG 0.480162 7_1:+76432642 Msa1039290:three_prime_UTR
TGATAACCATCAACAATATC+CGG 0.481164 7_1:-76432038 None:intergenic
CTGAATGCAGTAGCATCTAT+GGG 0.483252 7_1:-76433168 None:intergenic
ATGCGTTATAGAGGTAGAAA+AGG 0.488536 7_1:+76431439 Msa1039290:CDS
AAGTATGGTGAAACTGGATT+AGG 0.490077 7_1:+76430090 Msa1039290:five_prime_UTR
TGGTGCCTTATCCTAGGATA+AGG 0.490247 7_1:+76431736 Msa1039290:CDS
GTGGAACATGTTAATGTTGA+GGG 0.493344 7_1:+76430409 Msa1039290:five_prime_UTR
TTGGAGTGCTGAAGAAAAGA+TGG 0.493759 7_1:+76431856 Msa1039290:CDS
CATGTATGACTTCACTTCAA+AGG 0.493877 7_1:+76430883 Msa1039290:CDS
CAAGACCTTGGGTAGGCACA+TGG 0.495437 7_1:-76430588 None:intergenic
GTTAAGACTTGTAAAGTTGG+TGG 0.501481 7_1:+76433125 Msa1039290:three_prime_UTR
TTAGTTAAGACTTGTAAAGT+TGG 0.501586 7_1:+76433122 Msa1039290:three_prime_UTR
GCGGATCAAATGCGTTATAG+AGG 0.501916 7_1:+76431430 Msa1039290:CDS
TAAAGTTGGGTCCATTCTAA+AGG 0.503902 7_1:-76430961 None:intergenic
TCAAGTATGAAGTTCACCTT+CGG 0.503999 7_1:-76430707 None:intergenic
CTTTGAAGTGAAGTCATACA+TGG 0.505120 7_1:-76430882 None:intergenic
TGTATATGTTAAATAAAACT+AGG 0.506032 7_1:+76433247 Msa1039290:three_prime_UTR
GGCGGTATAAATTGAAAAGT+TGG 0.506589 7_1:-76431233 None:intergenic
AGGTTTAGTTGCATTTCCAC+TGG 0.507590 7_1:+76433064 Msa1039290:three_prime_UTR
TCCGGAGGTGGCCGAGTTGG+TGG 0.507633 7_1:+76432606 Msa1039290:three_prime_UTR
TAAAGGATATCCTGATAAAG+AGG 0.508049 7_1:+76431707 Msa1039290:CDS
GATATATGGTGCCTTATCCT+AGG 0.509383 7_1:+76431730 Msa1039290:CDS
GTGCCTACCCAAGGTCTTGG+AGG 0.510178 7_1:+76430592 Msa1039290:five_prime_UTR
TGGTAGAAGTAGGGGCTACA+GGG 0.514971 7_1:+76431178 Msa1039290:CDS
TAACGCATTTGATCCGCCTC+AGG 0.515164 7_1:-76431424 None:intergenic
CCAAACTAAACACACCAGAT+AGG 0.517008 7_1:-76432886 None:intergenic
TAATAGTTTGAATCCGGAGG+TGG 0.518975 7_1:+76432594 Msa1039290:three_prime_UTR
TCAACGAATCAAGCAAACCT+TGG 0.519510 7_1:-76432711 None:intergenic
GTGATGTTGGTTATCTGTTG+TGG 0.521069 7_1:+76432370 Msa1039290:three_prime_UTR
CAACGAATCAAGCAAACCTT+GGG 0.521442 7_1:-76432710 None:intergenic
TGATACCTTATCCTAGGATA+AGG 0.524433 7_1:-76431741 None:intergenic
GAATCCGGAGGTGGCCGAGT+TGG 0.524551 7_1:+76432603 Msa1039290:three_prime_UTR
TTGTTATCAGTTTGTGCACA+AGG 0.528738 7_1:+76432921 Msa1039290:three_prime_UTR
AAAACAACCAAAACAGCACA+GGG 0.531002 7_1:-76432344 None:intergenic
TGAAATAAGCTATAAGCTCA+TGG 0.532113 7_1:-76429070 None:intergenic
TAAATAAAACTAGGCATACA+AGG 0.534367 7_1:+76433256 Msa1039290:three_prime_UTR
AGGAATAAGAAAATTTGTAA+GGG 0.534993 7_1:+76432510 Msa1039290:three_prime_UTR
TTGTGTACCTCCAAGACCTT+GGG 0.536559 7_1:-76430599 None:intergenic
GTCGGTAGATCCTTCGATTG+AGG 0.536831 7_1:+76430300 Msa1039290:five_prime_UTR
ACAGTCCAAACCACACCAGC+AGG 0.538429 7_1:-76432971 None:intergenic
CTTGTGTACCTCCAAGACCT+TGG 0.541010 7_1:-76430600 None:intergenic
GACTGATGATACCTTATCCT+AGG 0.542227 7_1:-76431747 None:intergenic
AATGACAGTTGAAGAGAAGG+TGG 0.543559 7_1:+76431040 Msa1039290:CDS
TTTATATCAGTTGGATGGGA+GGG 0.546071 7_1:+76431514 Msa1039290:CDS
GCTGCCGTAGCCTGCTGGTG+TGG 0.547359 7_1:+76432961 Msa1039290:three_prime_UTR
ACTGAAGGTGCACAAGTGAC+TGG 0.548205 7_1:+76430637 Msa1039290:five_prime_UTR
ACAACATGCCATGACATTGA+AGG 0.550242 7_1:-76431470 None:intergenic
ATTACTCCAGCACACTCCCA+AGG 0.550779 7_1:-76432481 None:intergenic
AGGTGGTGCTGCTGTTAGCG+TGG 0.551251 7_1:+76432853 Msa1039290:three_prime_UTR
GGTACCCATGTGCCTACCCA+AGG 0.553541 7_1:+76430583 Msa1039290:five_prime_UTR
GAGAAATGAAAACCTGGGTG+TGG 0.556381 7_1:-76429408 None:intergenic
GGTGGCCTGTTTGTGTGAGG+TGG 0.558865 7_1:+76432836 Msa1039290:three_prime_UTR
TTCTAAGAGATGAATGTGCC+CGG 0.559680 7_1:-76431815 None:intergenic
AACATGTTAATGTTGAGGGG+GGG 0.561184 7_1:+76430413 Msa1039290:five_prime_UTR
AGCTTAGTTGTTCAGATGAG+TGG 0.562434 7_1:+76430133 Msa1039290:five_prime_UTR
CAGACGACATGCTTCTGAAG+TGG 0.563314 7_1:+76430504 Msa1039290:five_prime_UTR
TGGATCATCATTTAAATGGA+AGG 0.564174 7_1:+76429960 Msa1039290:five_prime_UTR
GCTGTGCGGTTGTGTGTTTG+CGG 0.564534 7_1:+76432786 Msa1039290:three_prime_UTR
CAAGGTAGTGAAAGACAAGA+GGG 0.565833 7_1:+76432059 Msa1039290:CDS
GTATGACAGAGTGGTGGGAG+AGG 0.566731 7_1:+76432428 Msa1039290:three_prime_UTR
CAAGTGACTGGTCAAGGTGG+AGG 0.567091 7_1:+76430649 Msa1039290:five_prime_UTR
GCTCCGTCTTGTGTGGCACA+CGG 0.569922 7_1:+76432533 Msa1039290:three_prime_UTR
AAAGACAAGAGGGAAGATCA+GGG 0.574105 7_1:+76432069 Msa1039290:CDS
ATGGTGAAACTGGATTAGGA+TGG 0.575573 7_1:+76430094 Msa1039290:five_prime_UTR
AATCCCCACCTTCAATGTCA+TGG 0.576613 7_1:+76431462 Msa1039290:CDS
GCAATTAGTGGTAGAAGTAG+GGG 0.577399 7_1:+76431170 Msa1039290:CDS
AATGCAACTAAACCTATAGC+AGG 0.577430 7_1:-76433056 None:intergenic
CTCCAGTATTCCTCAATCGA+AGG 0.577951 7_1:-76430310 None:intergenic
GTAAGGGGCTCCGTCTTGTG+TGG 0.578517 7_1:+76432526 Msa1039290:three_prime_UTR
CTGTAACTCATCCACCAACT+CGG 0.579225 7_1:-76432617 None:intergenic
TGGAACATGTTAATGTTGAG+GGG 0.580928 7_1:+76430410 Msa1039290:five_prime_UTR
GCAAGGTATGACAGAGTGGT+GGG 0.582604 7_1:+76432423 Msa1039290:three_prime_UTR
ATTTATATCAGTTGGATGGG+AGG 0.586207 7_1:+76431513 Msa1039290:CDS
TCAAGTAATGATAAAATGGA+AGG 0.588534 7_1:+76429853 Msa1039290:five_prime_UTR
TGGTGAAACTGGATTAGGAT+GGG 0.590498 7_1:+76430095 Msa1039290:five_prime_UTR
CAAACCACACCAGCAGGCTA+CGG 0.591450 7_1:-76432965 None:intergenic
GGCTTCTTGAGCATTAGTTG+GGG 0.591786 7_1:-76431787 None:intergenic
ACGCCGTGTGCCACACAAGA+CGG 0.592408 7_1:-76432536 None:intergenic
TCAACATTAACATGTTCCAC+AGG 0.594898 7_1:-76430406 None:intergenic
GGCAAGGTATGACAGAGTGG+TGG 0.595950 7_1:+76432422 Msa1039290:three_prime_UTR
AACTTTCCGAAGCCACCAGA+TGG 0.597239 7_1:+76431589 Msa1039290:CDS
TCCTGAATTGGTTCAACCTG+TGG 0.597923 7_1:+76430390 Msa1039290:five_prime_UTR
AGAGCGCTTTCAACATTCTG+GGG 0.598087 7_1:+76431112 Msa1039290:CDS
TTCATTAGAATAAATGGACG+TGG 0.598170 7_1:+76429940 Msa1039290:five_prime_UTR
GGAATAAGAAAATTTGTAAG+GGG 0.599514 7_1:+76432511 Msa1039290:three_prime_UTR
ACTTTATTTAAACAGTTGTG+TGG 0.602388 7_1:+76430978 Msa1039290:CDS
TAGTTGTTCAGATGAGTGGT+GGG 0.602613 7_1:+76430137 Msa1039290:five_prime_UTR
TGGATGAATGAGATATTGAA+TGG 0.602809 7_1:+76430915 Msa1039290:CDS
TTAGTTGTTCAGATGAGTGG+TGG 0.603094 7_1:+76430136 Msa1039290:five_prime_UTR
TTACTCCAGCACACTCCCAA+GGG 0.603489 7_1:-76432480 None:intergenic
TGCTCAAGAAGCCTTTAACC+GGG 0.605100 7_1:+76431797 Msa1039290:CDS
CCTTAGTAATTAATTACCAG+TGG 0.606215 7_1:-76433080 None:intergenic
ACATGCCATGACATTGAAGG+TGG 0.607026 7_1:-76431467 None:intergenic
ACTGATTCGTTTCCACACCC+AGG 0.608955 7_1:+76429396 Msa1039290:five_prime_UTR
TTTGTGTATACACTTGCTAT+GGG 0.610480 7_1:+76431068 Msa1039290:CDS
AAAGGATATCCTGATAAAGA+GGG 0.611877 7_1:+76431708 Msa1039290:CDS
TTGGGAGTGTGCTGGAGTAA+TGG 0.613027 7_1:+76432483 Msa1039290:three_prime_UTR
AGCTGCATGTATTCCTGAGG+CGG 0.613635 7_1:+76431411 Msa1039290:CDS
AACCAATTCAGGATCCATAG+AGG 0.615080 7_1:-76430380 None:intergenic
TCAAGGTAGTGAAAGACAAG+AGG 0.615234 7_1:+76432058 Msa1039290:CDS
GGTGCACAAGTGACTGGTCA+AGG 0.615876 7_1:+76430643 Msa1039290:five_prime_UTR
GCACCTTCAGTATATTCACT+AGG 0.618197 7_1:-76430625 None:intergenic
CATCATTATGAGATTGATGG+AGG 0.622802 7_1:+76430463 Msa1039290:five_prime_UTR
AGGGAGATCAACCAAGACAA+AGG 0.623380 7_1:+76432088 Msa1039290:CDS
ACAAATATACACAATTGTGA+AGG 0.624210 7_1:-76433225 None:intergenic
AAGACCTTGGGTAGGCACAT+GGG 0.624761 7_1:-76430587 None:intergenic
AACTCGACAGAAAATCCAGA+TGG 0.625031 7_1:-76432272 None:intergenic
GTTTAATAGTTTGAATCCGG+AGG 0.626692 7_1:+76432591 Msa1039290:three_prime_UTR
TGGGTCTTAACGCTAAATTG+TGG 0.627260 7_1:-76431897 None:intergenic
GGTAGAAGTAGGGGCTACAG+GGG 0.627456 7_1:+76431179 Msa1039290:CDS
TTTGGTGGCCTGTTTGTGTG+AGG 0.627721 7_1:+76432833 Msa1039290:three_prime_UTR
ATGCCATGACATTGAAGGTG+GGG 0.632052 7_1:-76431465 None:intergenic
TCTTCATGCAATTAACACAC+CGG 0.632673 7_1:+76431561 Msa1039290:CDS
GGCTTCGGAAAGTTTAACGC+CGG 0.635053 7_1:-76431580 None:intergenic
ATGACAGTTGAAGAGAAGGT+GGG 0.635335 7_1:+76431041 Msa1039290:CDS
GGAACATGTTAATGTTGAGG+GGG 0.640316 7_1:+76430411 Msa1039290:five_prime_UTR
ACGTGATATCATAAGACCAA+AGG 0.641000 7_1:+76431208 Msa1039290:CDS
GAACATGTTAATGTTGAGGG+GGG 0.642314 7_1:+76430412 Msa1039290:five_prime_UTR
ACCAATTCAGGATCCATAGA+GGG 0.643334 7_1:-76430379 None:intergenic
GCAGCAAGAAGGGTTTGGCA+AGG 0.645361 7_1:+76432406 Msa1039290:three_prime_UTR
TTGATGACAATTATGCAACT+GGG 0.647938 7_1:+76430341 Msa1039290:five_prime_UTR
TGTGGAACATGTTAATGTTG+AGG 0.649163 7_1:+76430408 Msa1039290:five_prime_UTR
GCTTCTTGAGCATTAGTTGG+GGG 0.650707 7_1:-76431786 None:intergenic
TGGGTGTGGAAACGAATCAG+TGG 0.653753 7_1:-76429394 None:intergenic
CGCTCATCATTAGAAATATG+CGG 0.656782 7_1:-76431254 None:intergenic
GTACCTAGTGAATATACTGA+AGG 0.660409 7_1:+76430622 Msa1039290:five_prime_UTR
CATGCCATGACATTGAAGGT+GGG 0.661703 7_1:-76431466 None:intergenic
CGCATATTTCTAATGATGAG+CGG 0.664511 7_1:+76431255 Msa1039290:CDS
AAGAATCAACATCACACCGA+AGG 0.664769 7_1:+76430691 Msa1039290:five_prime_UTR
AATCACAGAGAAAGGAACGA+AGG 0.671127 7_1:-76429348 None:intergenic
ATGAGTTACAGGTTATGTCG+TGG 0.674533 7_1:+76432629 Msa1039290:three_prime_UTR
CAAATAATAATACCATCTGG+TGG 0.678592 7_1:-76431601 None:intergenic
GCACAAGTGACTGGTCAAGG+TGG 0.681395 7_1:+76430646 Msa1039290:five_prime_UTR
TATAGCTGCATGTATTCCTG+AGG 0.681478 7_1:+76431408 Msa1039290:CDS
GTATGACTTCACTTCAAAGG+GGG 0.681704 7_1:+76430886 Msa1039290:CDS
TTTGGCAAGGTATGACAGAG+TGG 0.687125 7_1:+76432419 Msa1039290:three_prime_UTR
TGTGCTGGAGTAATGGCGAG+AGG 0.687653 7_1:+76432490 Msa1039290:three_prime_UTR
GAAACGAATCAGTGGAACGA+CGG 0.689262 7_1:-76429386 None:intergenic
ACTAAACCTATAGCAGGACA+AGG 0.692719 7_1:-76433050 None:intergenic
TACTCCAGCACACTCCCAAG+GGG 0.705173 7_1:-76432479 None:intergenic
CTCAGTCTTAGGCTGCTGTG+CGG 0.708610 7_1:+76432772 Msa1039290:three_prime_UTR
GTACCTCCAAGACCTTGGGT+AGG 0.709359 7_1:-76430595 None:intergenic
AGGCATTCATACATCGAACA+GGG 0.709805 7_1:-76430941 None:intergenic
GTGGTGCTGCTGTTAGCGTG+GGG 0.711716 7_1:+76432855 Msa1039290:three_prime_UTR
TGATGACAATTATGCAACTG+GGG 0.713435 7_1:+76430342 Msa1039290:five_prime_UTR
TGTATGACTTCACTTCAAAG+GGG 0.715580 7_1:+76430885 Msa1039290:CDS
ACAACCAAAACAGCACAGGG+AGG 0.718622 7_1:-76432341 None:intergenic
TGAATGCAGTAGCATCTATG+GGG 0.730463 7_1:-76433167 None:intergenic
CATTCATACATCGAACAGGG+TGG 0.739476 7_1:-76430938 None:intergenic
TTGTCTGTAGGAGAAACCTG+AGG 0.744782 7_1:+76430258 Msa1039290:intron
TCATCATTAGAAATATGCGG+CGG 0.753629 7_1:-76431251 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATAATAAATTATAAA+GGG - chr7_1:76429213-76429232 None:intergenic 0.0%
!!! TTTTTTATAATAAATTATAA+AGG - chr7_1:76429214-76429233 None:intergenic 0.0%
!! TTGAATTATAGAAATAAAAA+AGG - chr7_1:76429786-76429805 None:intergenic 10.0%
!!! GATTTTAGAAAAAATAGTAT+GGG - chr7_1:76429182-76429201 None:intergenic 15.0%
!! TAAATTATAAAGGGTAAAAA+AGG - chr7_1:76429204-76429223 None:intergenic 15.0%
!!! TTTTTTTTTATTGTTGAGAA+TGG - chr7_1:76429312-76429331 None:intergenic 15.0%
!!! GTAGTTTATGATTTTTTTTA+CGG + chr7_1:76429485-76429504 Msa1039290:intron 15.0%
!!! GATTAATGAAAATTTTTACA+TGG + chr7_1:76429695-76429714 Msa1039290:intron 15.0%
!! ATATTGTCAAATTTATAAGA+TGG + chr7_1:76429828-76429847 Msa1039290:intron 15.0%
!!! TTATTCTTTAAAGTTTTTGA+GGG - chr7_1:76430027-76430046 None:intergenic 15.0%
!! ATAATTTATATAAGATCTGA+AGG + chr7_1:76430217-76430236 Msa1039290:intron 15.0%
!! TAAAAAATATCGTAATAAGT+CGG + chr7_1:76430282-76430301 Msa1039290:five_prime_UTR 15.0%
!!! ATATATTTTACCTTGAAATA+AGG - chr7_1:76431287-76431306 None:intergenic 15.0%
!! TAACTAATGTTTAATATTTG+AGG - chr7_1:76433109-76433128 None:intergenic 15.0%
!! TGTATATGTTAAATAAAACT+AGG + chr7_1:76433247-76433266 Msa1039290:three_prime_UTR 15.0%
!!! GGATTTTAGAAAAAATAGTA+TGG - chr7_1:76429183-76429202 None:intergenic 20.0%
!! TGTTCTTCATTAGATTTATT+TGG + chr7_1:76429624-76429643 Msa1039290:intron 20.0%
!! TTTGACAATATACAATAATG+AGG - chr7_1:76429819-76429838 None:intergenic 20.0%
!!! CAAAATTTCTTTTCATATTC+AGG - chr7_1:76429904-76429923 None:intergenic 20.0%
!! GTAAAGTTCATTAGAATAAA+TGG + chr7_1:76429934-76429953 Msa1039290:five_prime_UTR 20.0%
!!! CTTATTCTTTAAAGTTTTTG+AGG - chr7_1:76430028-76430047 None:intergenic 20.0%
!! ACAACTGTTTAAATAAAGTT+GGG - chr7_1:76430977-76430996 None:intergenic 20.0%
!! AATCTTATACTTTATCATGA+TGG + chr7_1:76431323-76431342 Msa1039290:intron 20.0%
!!! TCTAACTAACCTTTTTTAAT+AGG + chr7_1:76431357-76431376 Msa1039290:intron 20.0%
!! CAATACAATCCTATTAAAAA+AGG - chr7_1:76431369-76431388 None:intergenic 20.0%
!!! CTTTTTTAATAGGATTGTAT+TGG + chr7_1:76431367-76431386 Msa1039290:intron 20.0%
!! ATACAAATAATAATACCATC+TGG - chr7_1:76431607-76431626 None:intergenic 20.0%
!! AATTATAAAACAAACTTCCT+CGG - chr7_1:76431648-76431667 None:intergenic 20.0%
!!! TTTTGTTTTTTCTCTTAAAC+AGG + chr7_1:76431666-76431685 Msa1039290:intron 20.0%
!! TTAAACAGGTAGATATTATT+TGG + chr7_1:76431680-76431699 Msa1039290:intron 20.0%
!!! AGATATTATTTGGTTGATAA+AGG + chr7_1:76431690-76431709 Msa1039290:CDS 20.0%
!! AGCTATAATAACATCAATTT+GGG - chr7_1:76431919-76431938 None:intergenic 20.0%
!! AGGAATAAGAAAATTTGTAA+GGG + chr7_1:76432510-76432529 Msa1039290:three_prime_UTR 20.0%
! AAAAATAGTATGGGTAAAAG+TGG - chr7_1:76429173-76429192 None:intergenic 25.0%
! ATTATACTTCAATCGTTTGT+TGG + chr7_1:76429456-76429475 Msa1039290:intron 25.0%
!! ATTTCTGATTTGATTGTGTT+TGG + chr7_1:76429565-76429584 Msa1039290:intron 25.0%
!! TGATTGTGTTTGGATTTTAT+TGG + chr7_1:76429575-76429594 Msa1039290:intron 25.0%
! AATCATTTGAATACACACAA+CGG - chr7_1:76429659-76429678 None:intergenic 25.0%
! TAGAAATAAAAAAGGACACA+TGG - chr7_1:76429778-76429797 None:intergenic 25.0%
!! TTCCATTTTATCATTACTTG+AGG - chr7_1:76429854-76429873 None:intergenic 25.0%
! TCAAGTAATGATAAAATGGA+AGG + chr7_1:76429853-76429872 Msa1039290:five_prime_UTR 25.0%
! TAGATACTATGAAGAAAGAT+TGG + chr7_1:76430049-76430068 Msa1039290:five_prime_UTR 25.0%
! AATCATCATTATGAGATTGA+TGG + chr7_1:76430460-76430479 Msa1039290:five_prime_UTR 25.0%
!! TTTGCCTAATTTTATGAATG+AGG + chr7_1:76430555-76430574 Msa1039290:five_prime_UTR 25.0%
! CACAACTGTTTAAATAAAGT+TGG - chr7_1:76430978-76430997 None:intergenic 25.0%
!! ACTTTATTTAAACAGTTGTG+TGG + chr7_1:76430978-76430997 Msa1039290:CDS 25.0%
!! AAAAAAGGTTAGTTAGACAA+CGG - chr7_1:76431354-76431373 None:intergenic 25.0%
! TGTTTCACATTTATATCAGT+TGG + chr7_1:76431505-76431524 Msa1039290:CDS 25.0%
! AGTTGTATAGAAAGATCATT+TGG + chr7_1:76431837-76431856 Msa1039290:CDS 25.0%
! CAGCTATAATAACATCAATT+TGG - chr7_1:76431920-76431939 None:intergenic 25.0%
! TCATCATTAGGTATGTAATT+TGG - chr7_1:76432014-76432033 None:intergenic 25.0%
!!! ACAATATTGCTGCTTTATTA+TGG + chr7_1:76432120-76432139 Msa1039290:CDS 25.0%
!! CTGCTTTATTATGGAATAAT+AGG + chr7_1:76432129-76432148 Msa1039290:CDS 25.0%
!! AGCTAGTTAAATCAACATTT+TGG + chr7_1:76432229-76432248 Msa1039290:three_prime_UTR 25.0%
!!! TCAACATTTTGGATTGATTT+TGG + chr7_1:76432240-76432259 Msa1039290:three_prime_UTR 25.0%
! GAGGAATAAGAAAATTTGTA+AGG + chr7_1:76432509-76432528 Msa1039290:three_prime_UTR 25.0%
! GGAATAAGAAAATTTGTAAG+GGG + chr7_1:76432511-76432530 Msa1039290:three_prime_UTR 25.0%
! AGAGTTTAATAGTTTGAATC+CGG + chr7_1:76432588-76432607 Msa1039290:three_prime_UTR 25.0%
! CCATTAAAAAACATACAAGT+TGG - chr7_1:76432682-76432701 None:intergenic 25.0%
!!! CCAACTTGTATGTTTTTTAA+TGG + chr7_1:76432679-76432698 Msa1039290:three_prime_UTR 25.0%
!!! TGTATGTTTTTTAATGGTGT+TGG + chr7_1:76432685-76432704 Msa1039290:three_prime_UTR 25.0%
! TTAGTTAAGACTTGTAAAGT+TGG + chr7_1:76433122-76433141 Msa1039290:three_prime_UTR 25.0%
! ACAAATATACACAATTGTGA+AGG - chr7_1:76433228-76433247 None:intergenic 25.0%
! TAAATAAAACTAGGCATACA+AGG + chr7_1:76433256-76433275 Msa1039290:three_prime_UTR 25.0%
TGAAATAAGCTATAAGCTCA+TGG - chr7_1:76429073-76429092 None:intergenic 30.0%
TTCAAGAGAAATGAAAACCT+GGG - chr7_1:76429416-76429435 None:intergenic 30.0%
TACGGAAATCATTGTGAAAA+AGG + chr7_1:76429503-76429522 Msa1039290:intron 30.0%
ACGGAAATCATTGTGAAAAA+GGG + chr7_1:76429504-76429523 Msa1039290:intron 30.0%
AGAAATGAGAAAGATACTTG+GGG - chr7_1:76429551-76429570 None:intergenic 30.0%
CAGAAATGAGAAAGATACTT+GGG - chr7_1:76429552-76429571 None:intergenic 30.0%
TCAGAAATGAGAAAGATACT+TGG - chr7_1:76429553-76429572 None:intergenic 30.0%
! TTGTGTTTGGATTTTATTGG+TGG + chr7_1:76429578-76429597 Msa1039290:intron 30.0%
TTCATTAGAATAAATGGACG+TGG + chr7_1:76429940-76429959 Msa1039290:five_prime_UTR 30.0%
TGGATCATCATTTAAATGGA+AGG + chr7_1:76429960-76429979 Msa1039290:five_prime_UTR 30.0%
!! AAGTTTTTGAGGGAACTTTT+CGG - chr7_1:76430017-76430036 None:intergenic 30.0%
ATCAACTTATCTTTGTCTGT+AGG + chr7_1:76430246-76430265 Msa1039290:intron 30.0%
!!! TTACGATATTTTTTAGCCTC+AGG - chr7_1:76430277-76430296 None:intergenic 30.0%
! TTTGATGACAATTATGCAAC+TGG + chr7_1:76430340-76430359 Msa1039290:five_prime_UTR 30.0%
! TTGATGACAATTATGCAACT+GGG + chr7_1:76430341-76430360 Msa1039290:five_prime_UTR 30.0%
! CCTAATTTTATGAATGAGGT+GGG + chr7_1:76430559-76430578 Msa1039290:five_prime_UTR 30.0%
! GAAGAAAGTATGCACTTTAT+TGG + chr7_1:76430796-76430815 Msa1039290:CDS 30.0%
ATGTATGACTTCACTTCAAA+GGG + chr7_1:76430884-76430903 Msa1039290:CDS 30.0%
TGGATGAATGAGATATTGAA+TGG + chr7_1:76430915-76430934 Msa1039290:CDS 30.0%
! ATGTATGAATGCCTTTAGAA+TGG + chr7_1:76430950-76430969 Msa1039290:CDS 30.0%
! GGTGATTTGCAATCAAAATA+TGG + chr7_1:76430999-76431018 Msa1039290:CDS 30.0%
! ATTTGTGTATACACTTGCTA+TGG + chr7_1:76431067-76431086 Msa1039290:CDS 30.0%
!! TTTGTGTATACACTTGCTAT+GGG + chr7_1:76431068-76431087 Msa1039290:CDS 30.0%
!!! GAAGTTTTAGAAGCAATTAG+TGG + chr7_1:76431158-76431177 Msa1039290:CDS 30.0%
AATTGAAAAGTTGGATCCTT+TGG - chr7_1:76431227-76431246 None:intergenic 30.0%
GATTGTATTGGATGTATTGA+TGG + chr7_1:76431379-76431398 Msa1039290:CDS 30.0%
TCACATTTATATCAGTTGGA+TGG + chr7_1:76431509-76431528 Msa1039290:CDS 30.0%
CACATTTATATCAGTTGGAT+GGG + chr7_1:76431510-76431529 Msa1039290:CDS 30.0%
CAAATAATAATACCATCTGG+TGG - chr7_1:76431604-76431623 None:intergenic 30.0%
!! TATTTCTACAAGTTTTACCG+AGG + chr7_1:76431628-76431647 Msa1039290:intron 30.0%
TAAAGGATATCCTGATAAAG+AGG + chr7_1:76431707-76431726 Msa1039290:CDS 30.0%
AAAGGATATCCTGATAAAGA+GGG + chr7_1:76431708-76431727 Msa1039290:CDS 30.0%
TGATAACCATCAACAATATC+CGG - chr7_1:76432041-76432060 None:intergenic 30.0%
!! GATATTGTTGATGGTTATCA+AGG + chr7_1:76432041-76432060 Msa1039290:CDS 30.0%
CCTTAGTAATTAATTACCAG+TGG - chr7_1:76433083-76433102 None:intergenic 30.0%
CCACTGGTAATTAATTACTA+AGG + chr7_1:76433080-76433099 Msa1039290:three_prime_UTR 30.0%
!! TGAAAAAGTGTTACCAAACG+GGG - chr7_1:76429050-76429069 None:intergenic 35.0%
!! GTGAAAAAGTGTTACCAAAC+GGG - chr7_1:76429051-76429070 None:intergenic 35.0%
!! GGTGAAAAAGTGTTACCAAA+CGG - chr7_1:76429052-76429071 None:intergenic 35.0%
GTTCAAGAGAAATGAAAACC+TGG - chr7_1:76429417-76429436 None:intergenic 35.0%
!! TTGGATTTTATTGGTGGATG+TGG + chr7_1:76429584-76429603 Msa1039290:intron 35.0%
GGCCTCAAGTAATGATAAAA+TGG + chr7_1:76429849-76429868 Msa1039290:five_prime_UTR 35.0%
!!! TGGAAGGACTCAGTTTTAAA+TGG + chr7_1:76429869-76429888 Msa1039290:five_prime_UTR 35.0%
GACGTGGATCATCATTTAAA+TGG + chr7_1:76429956-76429975 Msa1039290:five_prime_UTR 35.0%
!! GATTCACCAAGATTTTGAAG+AGG + chr7_1:76429984-76430003 Msa1039290:five_prime_UTR 35.0%
!! CTTTGGAAGTTTCTGAAGTA+TGG + chr7_1:76430075-76430094 Msa1039290:five_prime_UTR 35.0%
!! TTTCTGAAGTATGGTGAAAC+TGG + chr7_1:76430084-76430103 Msa1039290:five_prime_UTR 35.0%
AAGTATGGTGAAACTGGATT+AGG + chr7_1:76430090-76430109 Msa1039290:five_prime_UTR 35.0%
! GTGGTGGGATAGAAAAATTA+AGG + chr7_1:76430152-76430171 Msa1039290:five_prime_UTR 35.0%
TGATGACAATTATGCAACTG+GGG + chr7_1:76430342-76430361 Msa1039290:five_prime_UTR 35.0%
TCAACATTAACATGTTCCAC+AGG - chr7_1:76430409-76430428 None:intergenic 35.0%
TGTGGAACATGTTAATGTTG+AGG + chr7_1:76430408-76430427 Msa1039290:five_prime_UTR 35.0%
GTGGAACATGTTAATGTTGA+GGG + chr7_1:76430409-76430428 Msa1039290:five_prime_UTR 35.0%
TGGAACATGTTAATGTTGAG+GGG + chr7_1:76430410-76430429 Msa1039290:five_prime_UTR 35.0%
CATCATTATGAGATTGATGG+AGG + chr7_1:76430463-76430482 Msa1039290:five_prime_UTR 35.0%
! GCCTAATTTTATGAATGAGG+TGG + chr7_1:76430558-76430577 Msa1039290:five_prime_UTR 35.0%
CCCACCTCATTCATAAAATT+AGG - chr7_1:76430562-76430581 None:intergenic 35.0%
! AATTTTATGAATGAGGTGGG+TGG + chr7_1:76430562-76430581 Msa1039290:five_prime_UTR 35.0%
GTACCTAGTGAATATACTGA+AGG + chr7_1:76430622-76430641 Msa1039290:five_prime_UTR 35.0%
TCAAGTATGAAGTTCACCTT+CGG - chr7_1:76430710-76430729 None:intergenic 35.0%
CTCATTCTGCAGATTAAAGT+TGG + chr7_1:76430735-76430754 Msa1039290:five_prime_UTR 35.0%
! AGTTGGTGCTCATGTTATTA+TGG + chr7_1:76430752-76430771 Msa1039290:exon 35.0%
!! CTTTGAAGTGAAGTCATACA+TGG - chr7_1:76430885-76430904 None:intergenic 35.0%
CATGTATGACTTCACTTCAA+AGG + chr7_1:76430883-76430902 Msa1039290:CDS 35.0%
TGTATGACTTCACTTCAAAG+GGG + chr7_1:76430885-76430904 Msa1039290:CDS 35.0%
TAAAGTTGGGTCCATTCTAA+AGG - chr7_1:76430964-76430983 None:intergenic 35.0%
TCAACTGTCATTCTCTTACT+TGG - chr7_1:76431032-76431051 None:intergenic 35.0%
AAGCAATTAGTGGTAGAAGT+AGG + chr7_1:76431168-76431187 Msa1039290:CDS 35.0%
AGCAATTAGTGGTAGAAGTA+GGG + chr7_1:76431169-76431188 Msa1039290:CDS 35.0%
ACGTGATATCATAAGACCAA+AGG + chr7_1:76431208-76431227 Msa1039290:CDS 35.0%
GGCGGTATAAATTGAAAAGT+TGG - chr7_1:76431236-76431255 None:intergenic 35.0%
TCATCATTAGAAATATGCGG+CGG - chr7_1:76431254-76431273 None:intergenic 35.0%
CGCTCATCATTAGAAATATG+CGG - chr7_1:76431257-76431276 None:intergenic 35.0%
! CGCATATTTCTAATGATGAG+CGG + chr7_1:76431255-76431274 Msa1039290:CDS 35.0%
AGGAATACATGCAGCTATAT+GGG - chr7_1:76431407-76431426 None:intergenic 35.0%
ATGCGTTATAGAGGTAGAAA+AGG + chr7_1:76431439-76431458 Msa1039290:CDS 35.0%
ATTTATATCAGTTGGATGGG+AGG + chr7_1:76431513-76431532 Msa1039290:CDS 35.0%
TTTATATCAGTTGGATGGGA+GGG + chr7_1:76431514-76431533 Msa1039290:CDS 35.0%
TCTTCATGCAATTAACACAC+CGG + chr7_1:76431561-76431580 Msa1039290:CDS 35.0%
TCCTGATAAAGAGGGATATA+TGG + chr7_1:76431716-76431735 Msa1039290:CDS 35.0%
ACCATATATCCCTCTTTATC+AGG - chr7_1:76431720-76431739 None:intergenic 35.0%
TGATACCTTATCCTAGGATA+AGG - chr7_1:76431744-76431763 None:intergenic 35.0%
CATACCTAATGATGAACTTC+CGG + chr7_1:76432019-76432038 Msa1039290:CDS 35.0%
ATATCCGGAAGTTCATCATT+AGG - chr7_1:76432026-76432045 None:intergenic 35.0%
CTCTATTATTGAGCTTCGTA+TGG + chr7_1:76432300-76432319 Msa1039290:three_prime_UTR 35.0%
AAAACAACCAAAACAGCACA+GGG - chr7_1:76432347-76432366 None:intergenic 35.0%
!! TGGTTGTTTTGTTGTGATGT+TGG + chr7_1:76432357-76432376 Msa1039290:three_prime_UTR 35.0%
GTTTAATAGTTTGAATCCGG+AGG + chr7_1:76432591-76432610 Msa1039290:three_prime_UTR 35.0%
!! TTTGCTTGATTCGTTGATTC+CGG + chr7_1:76432717-76432736 Msa1039290:three_prime_UTR 35.0%
AAAAACAGAAGCTAGAAACC+CGG - chr7_1:76432739-76432758 None:intergenic 35.0%
!!! GTTTCTAGCTTCTGTTTTTG+TGG + chr7_1:76432740-76432759 Msa1039290:three_prime_UTR 35.0%
! CTATCTGGTGTGTTTAGTTT+GGG + chr7_1:76432887-76432906 Msa1039290:three_prime_UTR 35.0%
TTGTTATCAGTTTGTGCACA+AGG + chr7_1:76432921-76432940 Msa1039290:three_prime_UTR 35.0%
AATGCAACTAAACCTATAGC+AGG - chr7_1:76433059-76433078 None:intergenic 35.0%
GTTAAGACTTGTAAAGTTGG+TGG + chr7_1:76433125-76433144 Msa1039290:three_prime_UTR 35.0%
CTATAAGCTCAAACGCTACT+TGG - chr7_1:76429127-76429146 None:intergenic 40.0%
AATCACAGAGAAAGGAACGA+AGG - chr7_1:76429351-76429370 None:intergenic 40.0%
CGAGCAAAAATCACAGAGAA+AGG - chr7_1:76429359-76429378 None:intergenic 40.0%
! ATTGGTGGATGTGGATTCTT+AGG + chr7_1:76429593-76429612 Msa1039290:intron 40.0%
TGATGGCCTCTTCAAAATCT+TGG - chr7_1:76429993-76430012 None:intergenic 40.0%
TGAAGAAAGATTGGCGACTT+TGG + chr7_1:76430058-76430077 Msa1039290:five_prime_UTR 40.0%
! ATGGTGAAACTGGATTAGGA+TGG + chr7_1:76430094-76430113 Msa1039290:five_prime_UTR 40.0%
! TGGTGAAACTGGATTAGGAT+GGG + chr7_1:76430095-76430114 Msa1039290:five_prime_UTR 40.0%
CAACTAAGCTTTCCTGTAAC+AGG - chr7_1:76430123-76430142 None:intergenic 40.0%
AGCTTAGTTGTTCAGATGAG+TGG + chr7_1:76430133-76430152 Msa1039290:five_prime_UTR 40.0%
TTAGTTGTTCAGATGAGTGG+TGG + chr7_1:76430136-76430155 Msa1039290:five_prime_UTR 40.0%
TAGTTGTTCAGATGAGTGGT+GGG + chr7_1:76430137-76430156 Msa1039290:five_prime_UTR 40.0%
ATCCTTCGATTGAGGAATAC+TGG + chr7_1:76430308-76430327 Msa1039290:five_prime_UTR 40.0%
ACCAATTCAGGATCCATAGA+GGG - chr7_1:76430382-76430401 None:intergenic 40.0%
AACCAATTCAGGATCCATAG+AGG - chr7_1:76430383-76430402 None:intergenic 40.0%
GGAACATGTTAATGTTGAGG+GGG + chr7_1:76430411-76430430 Msa1039290:five_prime_UTR 40.0%
GAACATGTTAATGTTGAGGG+GGG + chr7_1:76430412-76430431 Msa1039290:five_prime_UTR 40.0%
AACATGTTAATGTTGAGGGG+GGG + chr7_1:76430413-76430432 Msa1039290:five_prime_UTR 40.0%
GCACCTTCAGTATATTCACT+AGG - chr7_1:76430628-76430647 None:intergenic 40.0%
AAGAATCAACATCACACCGA+AGG + chr7_1:76430691-76430710 Msa1039290:five_prime_UTR 40.0%
GTATGACTTCACTTCAAAGG+GGG + chr7_1:76430886-76430905 Msa1039290:CDS 40.0%
AGGCATTCATACATCGAACA+GGG - chr7_1:76430944-76430963 None:intergenic 40.0%
! AAGGCATTCATACATCGAAC+AGG - chr7_1:76430945-76430964 None:intergenic 40.0%
GAGAATGACAGTTGAAGAGA+AGG + chr7_1:76431037-76431056 Msa1039290:CDS 40.0%
AATGACAGTTGAAGAGAAGG+TGG + chr7_1:76431040-76431059 Msa1039290:CDS 40.0%
ATGACAGTTGAAGAGAAGGT+GGG + chr7_1:76431041-76431060 Msa1039290:CDS 40.0%
TTGCTATGGGTGCTTCTAAT+AGG + chr7_1:76431081-76431100 Msa1039290:CDS 40.0%
TGCTATGGGTGCTTCTAATA+GGG + chr7_1:76431082-76431101 Msa1039290:CDS 40.0%
GCAATTAGTGGTAGAAGTAG+GGG + chr7_1:76431170-76431189 Msa1039290:CDS 40.0%
CAGGAATACATGCAGCTATA+TGG - chr7_1:76431408-76431427 None:intergenic 40.0%
TATAGCTGCATGTATTCCTG+AGG + chr7_1:76431408-76431427 Msa1039290:CDS 40.0%
ACAACATGCCATGACATTGA+AGG - chr7_1:76431473-76431492 None:intergenic 40.0%
ATAATACCATCTGGTGGCTT+CGG - chr7_1:76431598-76431617 None:intergenic 40.0%
GATATATGGTGCCTTATCCT+AGG + chr7_1:76431730-76431749 Msa1039290:CDS 40.0%
GACTGATGATACCTTATCCT+AGG - chr7_1:76431750-76431769 None:intergenic 40.0%
AGGCTTCTTGAGCATTAGTT+GGG - chr7_1:76431791-76431810 None:intergenic 40.0%
AAGGCTTCTTGAGCATTAGT+TGG - chr7_1:76431792-76431811 None:intergenic 40.0%
ATGCTCAAGAAGCCTTTAAC+CGG + chr7_1:76431796-76431815 Msa1039290:CDS 40.0%
! TTCTAAGAGATGAATGTGCC+CGG - chr7_1:76431818-76431837 None:intergenic 40.0%
!! TTGGAGTGCTGAAGAAAAGA+TGG + chr7_1:76431856-76431875 Msa1039290:CDS 40.0%
TGGGTCTTAACGCTAAATTG+TGG - chr7_1:76431900-76431919 None:intergenic 40.0%
GAACTTCCGGATATTGTTGA+TGG + chr7_1:76432032-76432051 Msa1039290:CDS 40.0%
TCAAGGTAGTGAAAGACAAG+AGG + chr7_1:76432058-76432077 Msa1039290:CDS 40.0%
CAAGGTAGTGAAAGACAAGA+GGG + chr7_1:76432059-76432078 Msa1039290:CDS 40.0%
AAAGACAAGAGGGAAGATCA+GGG + chr7_1:76432069-76432088 Msa1039290:CDS 40.0%
GTTACGCATTTCCTTTGTCT+TGG - chr7_1:76432102-76432121 None:intergenic 40.0%
!!! TTTGGATTGATTTTGGCTGC+AGG + chr7_1:76432247-76432266 Msa1039290:three_prime_UTR 40.0%
AACTCGACAGAAAATCCAGA+TGG - chr7_1:76432275-76432294 None:intergenic 40.0%
! TCTGGATTTTCTGTCGAGTT+TGG + chr7_1:76432275-76432294 Msa1039290:three_prime_UTR 40.0%
CAAAACAACCAAAACAGCAC+AGG - chr7_1:76432348-76432367 None:intergenic 40.0%
! GTGATGTTGGTTATCTGTTG+TGG + chr7_1:76432370-76432389 Msa1039290:three_prime_UTR 40.0%
TTGGTTATCTGTTGTGGTAC+TGG + chr7_1:76432376-76432395 Msa1039290:three_prime_UTR 40.0%
! TGGTTTTTCTGCAGCAAGAA+GGG + chr7_1:76432396-76432415 Msa1039290:three_prime_UTR 40.0%
TAATAGTTTGAATCCGGAGG+TGG + chr7_1:76432594-76432613 Msa1039290:three_prime_UTR 40.0%
ATGAGTTACAGGTTATGTCG+TGG + chr7_1:76432629-76432648 Msa1039290:three_prime_UTR 40.0%
! TTTAATGGTGTTGGATCCCA+AGG + chr7_1:76432694-76432713 Msa1039290:three_prime_UTR 40.0%
CAACGAATCAAGCAAACCTT+GGG - chr7_1:76432713-76432732 None:intergenic 40.0%
TCAACGAATCAAGCAAACCT+TGG - chr7_1:76432714-76432733 None:intergenic 40.0%
!! TTGCTTGATTCGTTGATTCC+GGG + chr7_1:76432718-76432737 Msa1039290:three_prime_UTR 40.0%
!!! AGCTTCTGTTTTTGTGGTAC+TGG + chr7_1:76432746-76432765 Msa1039290:three_prime_UTR 40.0%
!!! CTAGGCTTTGTTGCTTGTTT+TGG + chr7_1:76432815-76432834 Msa1039290:three_prime_UTR 40.0%
CCAAACTAAACACACCAGAT+AGG - chr7_1:76432889-76432908 None:intergenic 40.0%
CCTATCTGGTGTGTTTAGTT+TGG + chr7_1:76432886-76432905 Msa1039290:three_prime_UTR 40.0%
ACTAAACCTATAGCAGGACA+AGG - chr7_1:76433053-76433072 None:intergenic 40.0%
AGGTTTAGTTGCATTTCCAC+TGG + chr7_1:76433064-76433083 Msa1039290:three_prime_UTR 40.0%
TGAATGCAGTAGCATCTATG+GGG - chr7_1:76433170-76433189 None:intergenic 40.0%
CTGAATGCAGTAGCATCTAT+GGG - chr7_1:76433171-76433190 None:intergenic 40.0%
GAAACGAATCAGTGGAACGA+CGG - chr7_1:76429389-76429408 None:intergenic 45.0%
GAGAAATGAAAACCTGGGTG+TGG - chr7_1:76429411-76429430 None:intergenic 45.0%
! TGAGGGAACTTTTCGGTTGA+TGG - chr7_1:76430010-76430029 None:intergenic 45.0%
TTAGGATGGGATCCTGTTAC+AGG + chr7_1:76430108-76430127 Msa1039290:five_prime_UTR 45.0%
TTGTCTGTAGGAGAAACCTG+AGG + chr7_1:76430258-76430277 Msa1039290:intron 45.0%
CTCCAGTATTCCTCAATCGA+AGG - chr7_1:76430313-76430332 None:intergenic 45.0%
!! AGAGTTTGTTGCACCCTCTA+TGG + chr7_1:76430366-76430385 Msa1039290:five_prime_UTR 45.0%
ACCCTCTATGGATCCTGAAT+TGG + chr7_1:76430378-76430397 Msa1039290:five_prime_UTR 45.0%
! TCCTGAATTGGTTCAACCTG+TGG + chr7_1:76430390-76430409 Msa1039290:five_prime_UTR 45.0%
! TCCACAGGTTGAACCAATTC+AGG - chr7_1:76430394-76430413 None:intergenic 45.0%
ACATGTTAATGTTGAGGGGG+GGG + chr7_1:76430414-76430433 Msa1039290:five_prime_UTR 45.0%
TTGTGTACCTCCAAGACCTT+GGG - chr7_1:76430602-76430621 None:intergenic 45.0%
CATTCATACATCGAACAGGG+TGG - chr7_1:76430941-76430960 None:intergenic 45.0%
!! AGAGAGCGCTTTCAACATTC+TGG + chr7_1:76431110-76431129 Msa1039290:CDS 45.0%
!! GAGAGCGCTTTCAACATTCT+GGG + chr7_1:76431111-76431130 Msa1039290:CDS 45.0%
! AGAGCGCTTTCAACATTCTG+GGG + chr7_1:76431112-76431131 Msa1039290:CDS 45.0%
!! GCGGTACATGCCTTATTTCA+AGG + chr7_1:76431274-76431293 Msa1039290:CDS 45.0%
GCGGATCAAATGCGTTATAG+AGG + chr7_1:76431430-76431449 Msa1039290:CDS 45.0%
AATCCCCACCTTCAATGTCA+TGG + chr7_1:76431462-76431481 Msa1039290:CDS 45.0%
ATGCCATGACATTGAAGGTG+GGG - chr7_1:76431468-76431487 None:intergenic 45.0%
CATGCCATGACATTGAAGGT+GGG - chr7_1:76431469-76431488 None:intergenic 45.0%
ACATGCCATGACATTGAAGG+TGG - chr7_1:76431470-76431489 None:intergenic 45.0%
TGGTGCCTTATCCTAGGATA+AGG + chr7_1:76431736-76431755 Msa1039290:CDS 45.0%
GCTTCTTGAGCATTAGTTGG+GGG - chr7_1:76431789-76431808 None:intergenic 45.0%
GGCTTCTTGAGCATTAGTTG+GGG - chr7_1:76431790-76431809 None:intergenic 45.0%
TGCTCAAGAAGCCTTTAACC+GGG + chr7_1:76431797-76431816 Msa1039290:CDS 45.0%
AGATGAATGTGCCCGGTTAA+AGG - chr7_1:76431811-76431830 None:intergenic 45.0%
GAAAGACAAGAGGGAAGATC+AGG + chr7_1:76432068-76432087 Msa1039290:CDS 45.0%
AGGGAGATCAACCAAGACAA+AGG + chr7_1:76432088-76432107 Msa1039290:CDS 45.0%
!!! TTTTCCTCCCTGTGCTGTTT+TGG + chr7_1:76432337-76432356 Msa1039290:three_prime_UTR 45.0%
!! CTGGTTTTTCTGCAGCAAGA+AGG + chr7_1:76432395-76432414 Msa1039290:three_prime_UTR 45.0%
TTTCTGCAGCAAGAAGGGTT+TGG + chr7_1:76432401-76432420 Msa1039290:three_prime_UTR 45.0%
TTTGGCAAGGTATGACAGAG+TGG + chr7_1:76432419-76432438 Msa1039290:three_prime_UTR 45.0%
!!! TCCGATTGTTTTTGCCCCTT+GGG + chr7_1:76432465-76432484 Msa1039290:three_prime_UTR 45.0%
TCCCAAGGGGCAAAAACAAT+CGG - chr7_1:76432469-76432488 None:intergenic 45.0%
CTGTAACTCATCCACCAACT+CGG - chr7_1:76432620-76432639 None:intergenic 45.0%
!! GGTACTGGTATCTCAGTCTT+AGG + chr7_1:76432761-76432780 Msa1039290:three_prime_UTR 45.0%
!!! GGCTTTGTTGCTTGTTTTGG+TGG + chr7_1:76432818-76432837 Msa1039290:three_prime_UTR 45.0%
!! GGTGTGGTTTGGACTGTTTT+AGG + chr7_1:76432977-76432996 Msa1039290:three_prime_UTR 45.0%
!! GTGGTTTGGACTGTTTTAGG+TGG + chr7_1:76432980-76432999 Msa1039290:three_prime_UTR 45.0%
! GGCTTGACAGTTCTGTTTTG+TGG + chr7_1:76433001-76433020 Msa1039290:three_prime_UTR 45.0%
! TGACAGTTCTGTTTTGTGGC+TGG + chr7_1:76433005-76433024 Msa1039290:three_prime_UTR 45.0%
!! GGCAGCTTGTTTTTCTGTGT+TGG + chr7_1:76433026-76433045 Msa1039290:three_prime_UTR 45.0%
GCTGAATGCAGTAGCATCTA+TGG - chr7_1:76433172-76433191 None:intergenic 45.0%
TGGGTGTGGAAACGAATCAG+TGG - chr7_1:76429397-76429416 None:intergenic 50.0%
!! ACTGATTCGTTTCCACACCC+AGG + chr7_1:76429396-76429415 Msa1039290:five_prime_UTR 50.0%
GTCGGTAGATCCTTCGATTG+AGG + chr7_1:76430300-76430319 Msa1039290:five_prime_UTR 50.0%
GGGGGGATAAAGAAAGTGGT+GGG + chr7_1:76430431-76430450 Msa1039290:five_prime_UTR 50.0%
GGGGGATAAAGAAAGTGGTG+GGG + chr7_1:76430432-76430451 Msa1039290:five_prime_UTR 50.0%
! CAGACGACATGCTTCTGAAG+TGG + chr7_1:76430504-76430523 Msa1039290:five_prime_UTR 50.0%
AAGACCTTGGGTAGGCACAT+GGG - chr7_1:76430590-76430609 None:intergenic 50.0%
CTTGTGTACCTCCAAGACCT+TGG - chr7_1:76430603-76430622 None:intergenic 50.0%
! ACTGAAGGTGCACAAGTGAC+TGG + chr7_1:76430637-76430656 Msa1039290:five_prime_UTR 50.0%
CACTTCAAAGGGGGCAAGAT+TGG + chr7_1:76430895-76430914 Msa1039290:CDS 50.0%
TGGTAGAAGTAGGGGCTACA+GGG + chr7_1:76431178-76431197 Msa1039290:CDS 50.0%
AGCTGCATGTATTCCTGAGG+CGG + chr7_1:76431411-76431430 Msa1039290:CDS 50.0%
TAACGCATTTGATCCGCCTC+AGG - chr7_1:76431427-76431446 None:intergenic 50.0%
GGCTTCGGAAAGTTTAACGC+CGG - chr7_1:76431583-76431602 None:intergenic 50.0%
AACTTTCCGAAGCCACCAGA+TGG + chr7_1:76431589-76431608 Msa1039290:CDS 50.0%
CTTCGTATGGTCTGTTCTGC+AGG + chr7_1:76432313-76432332 Msa1039290:three_prime_UTR 50.0%
ACAACCAAAACAGCACAGGG+AGG - chr7_1:76432344-76432363 None:intergenic 50.0%
GCAAGGTATGACAGAGTGGT+GGG + chr7_1:76432423-76432442 Msa1039290:three_prime_UTR 50.0%
CAAGGGGCAAAAACAATCGG+AGG - chr7_1:76432466-76432485 None:intergenic 50.0%
!!! CTCCGATTGTTTTTGCCCCT+TGG + chr7_1:76432464-76432483 Msa1039290:three_prime_UTR 50.0%
TTACTCCAGCACACTCCCAA+GGG - chr7_1:76432483-76432502 None:intergenic 50.0%
ATTACTCCAGCACACTCCCA+AGG - chr7_1:76432484-76432503 None:intergenic 50.0%
! TTGGGAGTGTGCTGGAGTAA+TGG + chr7_1:76432483-76432502 Msa1039290:three_prime_UTR 50.0%
!! CGAGTTGGTGGATGAGTTAC+AGG + chr7_1:76432618-76432637 Msa1039290:three_prime_UTR 50.0%
TACAGGTTATGTCGTGGCGT+TGG + chr7_1:76432635-76432654 Msa1039290:three_prime_UTR 50.0%
ACAGGTTATGTCGTGGCGTT+GGG + chr7_1:76432636-76432655 Msa1039290:three_prime_UTR 50.0%
!! GTGTGTTTGCGGTTTGGTCT+AGG + chr7_1:76432797-76432816 Msa1039290:three_prime_UTR 50.0%
! TTTGGTGGCCTGTTTGTGTG+AGG + chr7_1:76432833-76432852 Msa1039290:three_prime_UTR 50.0%
!! GTGTGTTTAGTTTGGGCTGC+TGG + chr7_1:76432894-76432913 Msa1039290:three_prime_UTR 50.0%
GTTGGTCCTTGTCCTGCTAT+AGG + chr7_1:76433044-76433063 Msa1039290:three_prime_UTR 50.0%
GAGGGGGGGGATAAAGAAAG+TGG + chr7_1:76430427-76430446 Msa1039290:five_prime_UTR 55.0%
GGGGGGGATAAAGAAAGTGG+TGG + chr7_1:76430430-76430449 Msa1039290:five_prime_UTR 55.0%
CAAGACCTTGGGTAGGCACA+TGG - chr7_1:76430591-76430610 None:intergenic 55.0%
CATGTGCCTACCCAAGGTCT+TGG + chr7_1:76430589-76430608 Msa1039290:five_prime_UTR 55.0%
GTACCTCCAAGACCTTGGGT+AGG - chr7_1:76430598-76430617 None:intergenic 55.0%
! GGTGCACAAGTGACTGGTCA+AGG + chr7_1:76430643-76430662 Msa1039290:five_prime_UTR 55.0%
! GCACAAGTGACTGGTCAAGG+TGG + chr7_1:76430646-76430665 Msa1039290:five_prime_UTR 55.0%
! CAAGTGACTGGTCAAGGTGG+AGG + chr7_1:76430649-76430668 Msa1039290:five_prime_UTR 55.0%
GTGGTAGAAGTAGGGGCTAC+AGG + chr7_1:76431177-76431196 Msa1039290:CDS 55.0%
GGTAGAAGTAGGGGCTACAG+GGG + chr7_1:76431179-76431198 Msa1039290:CDS 55.0%
!! TTTTGGCTGCAGGCTCCATC+TGG + chr7_1:76432257-76432276 Msa1039290:three_prime_UTR 55.0%
GCAGCAAGAAGGGTTTGGCA+AGG + chr7_1:76432406-76432425 Msa1039290:three_prime_UTR 55.0%
GGCAAGGTATGACAGAGTGG+TGG + chr7_1:76432422-76432441 Msa1039290:three_prime_UTR 55.0%
! GTATGACAGAGTGGTGGGAG+AGG + chr7_1:76432428-76432447 Msa1039290:three_prime_UTR 55.0%
TACTCCAGCACACTCCCAAG+GGG - chr7_1:76432482-76432501 None:intergenic 55.0%
TGTGCTGGAGTAATGGCGAG+AGG + chr7_1:76432490-76432509 Msa1039290:three_prime_UTR 55.0%
! TTGTGTGGCACACGGCGTTT+TGG + chr7_1:76432541-76432560 Msa1039290:three_prime_UTR 55.0%
! TGTGTGGCACACGGCGTTTT+GGG + chr7_1:76432542-76432561 Msa1039290:three_prime_UTR 55.0%
CTCAGTCTTAGGCTGCTGTG+CGG + chr7_1:76432772-76432791 Msa1039290:three_prime_UTR 55.0%
GCTGTGCGGTTGTGTGTTTG+CGG + chr7_1:76432786-76432805 Msa1039290:three_prime_UTR 55.0%
GCGGTTGTGTGTTTGCGGTT+TGG + chr7_1:76432791-76432810 Msa1039290:three_prime_UTR 55.0%
CAGCACCACCTCACACAAAC+AGG - chr7_1:76432844-76432863 None:intergenic 55.0%
CAAACCACACCAGCAGGCTA+CGG - chr7_1:76432968-76432987 None:intergenic 55.0%
ACAGTCCAAACCACACCAGC+AGG - chr7_1:76432974-76432993 None:intergenic 55.0%
GGTACCCATGTGCCTACCCA+AGG + chr7_1:76430583-76430602 Msa1039290:five_prime_UTR 60.0%
GTGCCTACCCAAGGTCTTGG+AGG + chr7_1:76430592-76430611 Msa1039290:five_prime_UTR 60.0%
! TTTGCCCCTTGGGAGTGTGC+TGG + chr7_1:76432475-76432494 Msa1039290:three_prime_UTR 60.0%
GTAAGGGGCTCCGTCTTGTG+TGG + chr7_1:76432526-76432545 Msa1039290:three_prime_UTR 60.0%
GCTCCGTCTTGTGTGGCACA+CGG + chr7_1:76432533-76432552 Msa1039290:three_prime_UTR 60.0%
ACGCCGTGTGCCACACAAGA+CGG - chr7_1:76432539-76432558 None:intergenic 60.0%
! TATGTCGTGGCGTTGGGCGT+TGG + chr7_1:76432642-76432661 Msa1039290:three_prime_UTR 60.0%
GGTGGCCTGTTTGTGTGAGG+TGG + chr7_1:76432836-76432855 Msa1039290:three_prime_UTR 60.0%
!! AGGTGGTGCTGCTGTTAGCG+TGG + chr7_1:76432853-76432872 Msa1039290:three_prime_UTR 60.0%
!! GGTGGTGCTGCTGTTAGCGT+GGG + chr7_1:76432854-76432873 Msa1039290:three_prime_UTR 60.0%
!! GTGGTGCTGCTGTTAGCGTG+GGG + chr7_1:76432855-76432874 Msa1039290:three_prime_UTR 60.0%
GCTGTTAGCGTGGGGCTGTT+TGG + chr7_1:76432863-76432882 Msa1039290:three_prime_UTR 60.0%
GTGGGGCTGTTTGGCCTATC+TGG + chr7_1:76432872-76432891 Msa1039290:three_prime_UTR 60.0%
CGTAGCCTGCTGGTGTGGTT+TGG + chr7_1:76432966-76432985 Msa1039290:three_prime_UTR 60.0%
GAATCCGGAGGTGGCCGAGT+TGG + chr7_1:76432603-76432622 Msa1039290:three_prime_UTR 65.0%
TCCACCAACTCGGCCACCTC+CGG - chr7_1:76432610-76432629 None:intergenic 65.0%
TTGCTGCTGCCGTAGCCTGC+TGG + chr7_1:76432956-76432975 Msa1039290:three_prime_UTR 65.0%
! TCCGGAGGTGGCCGAGTTGG+TGG + chr7_1:76432606-76432625 Msa1039290:three_prime_UTR 70.0%
GCTGCCGTAGCCTGCTGGTG+TGG + chr7_1:76432961-76432980 Msa1039290:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 76429042 76433281 76429042 ID=Msa1039290;Name=Msa1039290
chr7_1 mRNA 76429042 76433281 76429042 ID=Msa1039290-mRNA-1;Parent=Msa1039290;Name=Msa1039290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1206|1|1|1|0.75|0.6|5|1124|408
chr7_1 exon 76429042 76429417 76429042 ID=Msa1039290-mRNA-1:exon:19806;Parent=Msa1039290-mRNA-1
chr7_1 exon 76429847 76430173 76429847 ID=Msa1039290-mRNA-1:exon:19807;Parent=Msa1039290-mRNA-1
chr7_1 exon 76430268 76431295 76430268 ID=Msa1039290-mRNA-1:exon:19808;Parent=Msa1039290-mRNA-1
chr7_1 exon 76431379 76431610 76431379 ID=Msa1039290-mRNA-1:exon:19809;Parent=Msa1039290-mRNA-1
chr7_1 exon 76431688 76433281 76431688 ID=Msa1039290-mRNA-1:exon:19810;Parent=Msa1039290-mRNA-1
chr7_1 five_prime_UTR 76429042 76429417 76429042 ID=Msa1039290-mRNA-1:five_prime_utr;Parent=Msa1039290-mRNA-1
chr7_1 five_prime_UTR 76429847 76430173 76429847 ID=Msa1039290-mRNA-1:five_prime_utr;Parent=Msa1039290-mRNA-1
chr7_1 five_prime_UTR 76430268 76430770 76430268 ID=Msa1039290-mRNA-1:five_prime_utr;Parent=Msa1039290-mRNA-1
chr7_1 CDS 76430771 76431295 76430771 ID=Msa1039290-mRNA-1:cds;Parent=Msa1039290-mRNA-1
chr7_1 CDS 76431379 76431610 76431379 ID=Msa1039290-mRNA-1:cds;Parent=Msa1039290-mRNA-1
chr7_1 CDS 76431688 76432157 76431688 ID=Msa1039290-mRNA-1:cds;Parent=Msa1039290-mRNA-1
chr7_1 three_prime_UTR 76432158 76433281 76432158 ID=Msa1039290-mRNA-1:three_prime_utr;Parent=Msa1039290-mRNA-1
Gene Sequence

>Msa1039290

ATGGATAATGAAAGAGAAAATAAGAGAAGAAAGTATGCACTTTATTGGAATATAAGATCAAGTGCAATAAGTGCAATTGCTACATATTACTATAAATATGTCTATAAAGAACCATGTATGACTTCACTTCAAAGGGGGCAAGATTGGATGAATGAGATATTGAATGGCCACCCTGTTCGATGTATGAATGCCTTTAGAATGGACCCAACTTTATTTAAACAGTTGTGTGGTGATTTGCAATCAAAATATGGATTGCAACCAAGTAAGAGAATGACAGTTGAAGAGAAGGTGGGCATATTTGTGTATACACTTGCTATGGGTGCTTCTAATAGGGATGTTAGAGAGCGCTTTCAACATTCTGGGGAGACTATTAGCAGAGCATTTCATGAAGTTTTAGAAGCAATTAGTGGTAGAAGTAGGGGCTACAGGGGTCTAGCACGTGATATCATAAGACCAAAGGATCCAACTTTTCAATTTATACCGCCGCATATTTCTAATGATGAGCGGTACATGCCTTATTTCAAGGATTGTATTGGATGTATTGATGGTACCCATATAGCTGCATGTATTCCTGAGGCGGATCAAATGCGTTATAGAGGTAGAAAAGGAATCCCCACCTTCAATGTCATGGCATGTTGTGATTTTGATATGTGTTTCACATTTATATCAGTTGGATGGGAGGGATCAGCGCATGACACACGTGTTTTTCTTCATGCAATTAACACACCGGCGTTAAACTTTCCGAAGCCACCAGATGGTAGATATTATTTGGTTGATAAAGGATATCCTGATAAAGAGGGATATATGGTGCCTTATCCTAGGATAAGGTATCATCAGTCTCAGTTCGAACACGAACCCCCAACTAATGCTCAAGAAGCCTTTAACCGGGCACATTCATCTCTTAGAAGTTGTATAGAAAGATCATTTGGAGTGCTGAAGAAAAGATGGAAGATACTAAACAAAATGCCACAATTTAGCGTTAAGACCCAAATTGATGTTATTATAGCTGCATTTGCGTTGCATAACTATATTCGCATCAACTCACAAGATGATGCAATGTTTACTATTCTTGAGCGACATCCAAATTACATACCTAATGATGAACTTCCGGATATTGTTGATGGTTATCAAGGTAGTGAAAGACAAGAGGGAAGATCAGGGAGATCAACCAAGACAAAGGAAATGCGTAACAATATTGCTGCTTTATTATGGAATAATAGGCGATAG
Protein sequence

>Msa1039290

MDNERENKRRKYALYWNIRSSAISAIATYYYKYVYKEPCMTSLQRGQDWMNEILNGHPVRCMNAFRMDPTLFKQLCGDLQSKYGLQPSKRMTVEEKVGIFVYTLAMGASNRDVRERFQHSGETISRAFHEVLEAISGRSRGYRGLARDIIRPKDPTFQFIPPHISNDERYMPYFKDCIGCIDGTHIAACIPEADQMRYRGRKGIPTFNVMACCDFDMCFTFISVGWEGSAHDTRVFLHAINTPALNFPKPPDGRYYLVDKGYPDKEGYMVPYPRIRYHQSQFEHEPPTNAQEAFNRAHSSLRSCIERSFGVLKKRWKILNKMPQFSVKTQIDVIIAAFALHNYIRINSQDDAMFTILERHPNYIPNDELPDIVDGYQGSERQEGRSGRSTKTKEMRNNIAALLWNNRR*