Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042280 | XP_003625781.1 | 93.976 | 498 | 30 | 0 | 1 | 498 | 1 | 498 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042280 | G7L602 | 93.976 | 498 | 30 | 0 | 1 | 498 | 1 | 498 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1042280 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1042280 | Msa1125230 | 0.830486 | 2.857668e-55 | -8.615850e-47 |
| Msa1042280 | Msa1164770 | 0.862250 | 5.790181e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042280 | MtrunA17_Chr7g0266041 | 93.976 | 498 | 30 | 0 | 1 | 498 | 1 | 498 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1042280 | AT1G19490.1 | 36.533 | 375 | 176 | 10 | 136 | 498 | 146 | 470 | 1.42e-49 | 177 |
Find 122 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTTCCTACACTATTTA+AGG | -0.006225 | 7_1:-80112775 | None:intergenic |
| TAAATTCCGTCTCGACTTAT+TGG | 0.171625 | 7_1:-80110881 | None:intergenic |
| TTCCAGTTAGACAGTTATTT+TGG | 0.182560 | 7_1:+80112466 | Msa1042280:CDS |
| GATTATCCTGTTCATCTTCT+AGG | 0.241231 | 7_1:-80112719 | None:intergenic |
| GACTACTAATAAGCTCTTAA+AGG | 0.251801 | 7_1:+80112223 | Msa1042280:CDS |
| GTCTCTGATTGTCATTTATT+AGG | 0.252778 | 7_1:-80112614 | None:intergenic |
| TTATTGGAGTGAGTAGTCTT+AGG | 0.260548 | 7_1:-80110865 | None:intergenic |
| ATAACTGTCTAACTGGAAAA+TGG | 0.302100 | 7_1:-80112461 | None:intergenic |
| GTGAGTAGTCTTAGGGTAAT+AGG | 0.355142 | 7_1:-80110857 | None:intergenic |
| ACTCGGATCCTCCTACGGTT+AGG | 0.369037 | 7_1:+80109192 | Msa1042280:CDS |
| GCCAAGGTCATTACTAGATC+TGG | 0.382721 | 7_1:-80112856 | None:intergenic |
| GGCCAAAATAACTGTCTAAC+TGG | 0.384261 | 7_1:-80112468 | None:intergenic |
| CTCAATCTCCTCCGTCTTCA+CGG | 0.384356 | 7_1:-80109051 | None:intergenic |
| CCTTAAATAGTGTAGGAAAT+GGG | 0.385675 | 7_1:+80112775 | Msa1042280:CDS |
| TGTACATGTTTCCATGTCCT+TGG | 0.386547 | 7_1:+80112646 | Msa1042280:CDS |
| TCCTTAAATAGTGTAGGAAA+TGG | 0.396249 | 7_1:+80112774 | Msa1042280:CDS |
| ATAGACAACTCCTGCACAAC+AGG | 0.412712 | 7_1:-80112390 | None:intergenic |
| CTCGGATCCTCCTACGGTTA+GGG | 0.432230 | 7_1:+80109193 | Msa1042280:CDS |
| GGTTGTCCGTTTCCAATGTC+CGG | 0.444535 | 7_1:-80112681 | None:intergenic |
| GGACCTGCAGTTAATTGTAA+TGG | 0.449863 | 7_1:+80112951 | Msa1042280:CDS |
| CTGTGGCCTAGAAGATGAAC+AGG | 0.455065 | 7_1:+80112713 | Msa1042280:CDS |
| ACGGAGAATACGAAGGGTAT+TGG | 0.457238 | 7_1:+80110994 | Msa1042280:CDS |
| GGCGGAGACTCTTGCTTACC+TGG | 0.460047 | 7_1:+80109076 | Msa1042280:CDS |
| CCGTTTCCAATGTCCGGAGG+AGG | 0.461282 | 7_1:-80112675 | None:intergenic |
| GGAATGGCAATGGAATTAAA+TGG | 0.461945 | 7_1:-80112534 | None:intergenic |
| TATTGGAGTGAGTAGTCTTA+GGG | 0.463830 | 7_1:-80110864 | None:intergenic |
| TGGTTGGGTGCAACATATAT+CGG | 0.469292 | 7_1:-80109132 | None:intergenic |
| TAGTTGAATCGCTTATGAAT+AGG | 0.471459 | 7_1:-80109163 | None:intergenic |
| TTGATTAGATGAAGGAAGGA+TGG | 0.472494 | 7_1:-80112493 | None:intergenic |
| CTCTTCTTCCTCATGTCCGT+CGG | 0.474693 | 7_1:+80109019 | Msa1042280:CDS |
| TGAAAACAGAAGCTTCTGAC+TGG | 0.479343 | 7_1:+80112826 | Msa1042280:CDS |
| GACGGAGGAGATTGAGGCGG+CGG | 0.480909 | 7_1:+80109058 | Msa1042280:CDS |
| TGGAAAATGAAAACCTGAAG+AGG | 0.481984 | 7_1:+80111998 | Msa1042280:CDS |
| CTGCAGCAGAGGCACGGAAG+AGG | 0.484305 | 7_1:+80113126 | Msa1042280:CDS |
| GAATAGGCAGGTGTCTGGTT+GGG | 0.488254 | 7_1:-80109147 | None:intergenic |
| GCTGCTGACTTGCAACAGCT+TGG | 0.490748 | 7_1:-80110744 | None:intergenic |
| GTGGAATGTAATTGAAGCTC+GGG | 0.493264 | 7_1:-80112999 | None:intergenic |
| AGAGGCACGGAAGAGGAGAA+AGG | 0.497229 | 7_1:+80113133 | Msa1042280:CDS |
| GAACTTGATTAGATGAAGGA+AGG | 0.498468 | 7_1:-80112497 | None:intergenic |
| GCAAACAATTCGCCGTAGGC+AGG | 0.503421 | 7_1:+80111036 | Msa1042280:CDS |
| CTTATGAATAGGCAGGTGTC+TGG | 0.503520 | 7_1:-80109152 | None:intergenic |
| CACATTATTGAAAAGTTCCA+TGG | 0.505169 | 7_1:+80112930 | Msa1042280:CDS |
| AGAAGAGGAAGATGAAGAAG+TGG | 0.505509 | 7_1:-80109003 | None:intergenic |
| TCAATCTCCTCCGTCTTCAC+GGG | 0.506785 | 7_1:-80109050 | None:intergenic |
| CGATTCAACTATTCCTCACT+CGG | 0.509259 | 7_1:+80109175 | Msa1042280:CDS |
| TCCTTGGTTATACCCTCCTC+CGG | 0.513656 | 7_1:+80112662 | Msa1042280:CDS |
| TACAATTAACTGCAGGTCCA+TGG | 0.516676 | 7_1:-80112947 | None:intergenic |
| CGTGAAGACGGAGGAGATTG+AGG | 0.517627 | 7_1:+80109052 | Msa1042280:CDS |
| GGAGAAAACTCCTGTTGTGC+AGG | 0.518183 | 7_1:+80112380 | Msa1042280:CDS |
| AATTGAACTTGATTAGATGA+AGG | 0.520553 | 7_1:-80112501 | None:intergenic |
| TGAATAGGCAGGTGTCTGGT+TGG | 0.520784 | 7_1:-80109148 | None:intergenic |
| CTGTTCATCTTCTAGGCCAC+AGG | 0.521066 | 7_1:-80112712 | None:intergenic |
| CTGCACCTGGTACTAGTCCA+TGG | 0.524807 | 7_1:+80112427 | Msa1042280:CDS |
| TCCTCACTCGGATCCTCCTA+CGG | 0.528305 | 7_1:+80109187 | Msa1042280:CDS |
| TTATACCCTCCTCCGGACAT+TGG | 0.528583 | 7_1:+80112669 | Msa1042280:CDS |
| TTCTCATATCACAACTTCAC+AGG | 0.532127 | 7_1:+80113049 | Msa1042280:CDS |
| TACATATACATGCGATGGAA+TGG | 0.532964 | 7_1:-80112550 | None:intergenic |
| GCATTCAAAGCAGACAGTCT+AGG | 0.539062 | 7_1:+80113174 | Msa1042280:CDS |
| AGATACCTTGGTGATGGAAG+TGG | 0.543291 | 7_1:-80113018 | None:intergenic |
| TATCGGCGGAATGAGCTGTA+TGG | 0.547816 | 7_1:-80109115 | None:intergenic |
| GAAGAGGAAGATGAAGAAGT+GGG | 0.550511 | 7_1:-80109002 | None:intergenic |
| CTAATTACCCTAACCGTAGG+AGG | 0.551073 | 7_1:-80109200 | None:intergenic |
| CAGTTGCTGCAGCAGAGGCA+CGG | 0.552500 | 7_1:+80113120 | Msa1042280:CDS |
| CCTCCTCCGGACATTGGAAA+CGG | 0.555478 | 7_1:+80112675 | Msa1042280:CDS |
| ATCTCCTCCGTCTTCACGGG+AGG | 0.562055 | 7_1:-80109047 | None:intergenic |
| TACATGCGATGGAATGGCAA+TGG | 0.562934 | 7_1:-80112544 | None:intergenic |
| CAAGAACAGTTCATATGCCC+AGG | 0.563197 | 7_1:+80113080 | Msa1042280:CDS |
| GGAAGATCCTCCCGTGAAGA+CGG | 0.565935 | 7_1:+80109040 | Msa1042280:CDS |
| GAACAGGATAATCTTCCTCT+AGG | 0.575107 | 7_1:+80112729 | Msa1042280:CDS |
| CTTAAATAGTGTAGGAAATG+GGG | 0.577979 | 7_1:+80112776 | Msa1042280:CDS |
| ATTAGATGAAGGAAGGATGG+AGG | 0.578994 | 7_1:-80112490 | None:intergenic |
| CGACGGACATGAGGAAGAAG+AGG | 0.579490 | 7_1:-80109018 | None:intergenic |
| AAAAGCTGCCACCTTAGCGA+TGG | 0.585116 | 7_1:+80111978 | Msa1042280:CDS |
| AACTTGGAGTAGCATGGCCA+AGG | 0.586320 | 7_1:-80112872 | None:intergenic |
| ACTTTATCCTTAAATAGTGT+AGG | 0.586503 | 7_1:+80112768 | Msa1042280:CDS |
| AAGCTAATTACCCTAACCGT+AGG | 0.587473 | 7_1:-80109203 | None:intergenic |
| TGAATCGCTTATGAATAGGC+AGG | 0.589062 | 7_1:-80109159 | None:intergenic |
| TCCAGATCTAGTAATGACCT+TGG | 0.589350 | 7_1:+80112855 | Msa1042280:CDS |
| GGATGCAGTTGCTGCAGCAG+AGG | 0.591803 | 7_1:+80113115 | Msa1042280:CDS |
| AGGATCTTCCGACGGACATG+AGG | 0.592339 | 7_1:-80109027 | None:intergenic |
| CGTTTCCAATGTCCGGAGGA+GGG | 0.595745 | 7_1:-80112674 | None:intergenic |
| AGTGGAATGTAATTGAAGCT+CGG | 0.597326 | 7_1:-80113000 | None:intergenic |
| CCAATGTAAATACCTGCCTA+CGG | 0.598134 | 7_1:-80111048 | None:intergenic |
| CATGGTACATATACATGCGA+TGG | 0.599289 | 7_1:-80112555 | None:intergenic |
| TGGTGAAAAGAAGAAGGAGT+CGG | 0.606933 | 7_1:+80112175 | Msa1042280:intron |
| TCAAAGCAGACAGTCTAGGA+TGG | 0.606968 | 7_1:+80113178 | Msa1042280:CDS |
| TCTAGGCCACAGGAAGGTGG+TGG | 0.607622 | 7_1:-80112702 | None:intergenic |
| TAACCATTACAATTAACTGC+AGG | 0.608538 | 7_1:-80112954 | None:intergenic |
| CTCACTCCAATAAGTCGAGA+CGG | 0.611439 | 7_1:+80110875 | Msa1042280:CDS |
| GGAAAATGAAAACCTGAAGA+GGG | 0.611968 | 7_1:+80111999 | Msa1042280:CDS |
| AAATGGTTATAAAGAAACCA+TGG | 0.613612 | 7_1:-80112444 | None:intergenic |
| AGAAGCTGTTGAAGATACCT+TGG | 0.614930 | 7_1:-80113030 | None:intergenic |
| TGGCAAATAGAGAGTCAGCT+AGG | 0.616179 | 7_1:+80111014 | Msa1042280:CDS |
| GGAGGGTATAACCAAGGACA+TGG | 0.617444 | 7_1:-80112657 | None:intergenic |
| GAAAACAGAAGCTTCTGACT+GGG | 0.620422 | 7_1:+80112827 | Msa1042280:CDS |
| TCTTCTAGGCCACAGGAAGG+TGG | 0.623832 | 7_1:-80112705 | None:intergenic |
| AGAAACCATGGACTAGTACC+AGG | 0.628134 | 7_1:-80112432 | None:intergenic |
| TTAGATGAAGGAAGGATGGA+GGG | 0.628242 | 7_1:-80112489 | None:intergenic |
| CATGGACTAGTACCAGGTGC+AGG | 0.629095 | 7_1:-80112426 | None:intergenic |
| TCCGAGGTATCACCTGCACC+TGG | 0.634195 | 7_1:+80112414 | Msa1042280:CDS |
| ACCAGGTGCAGGTGATACCT+CGG | 0.636913 | 7_1:-80112415 | None:intergenic |
| GGACAACCACCACCTTCCTG+TGG | 0.640764 | 7_1:+80112696 | Msa1042280:CDS |
| GATTCAGACTCAGAAGAGCA+TGG | 0.642089 | 7_1:-80112573 | None:intergenic |
| GCAGGAGTTGTCTATGTCCG+AGG | 0.642391 | 7_1:+80112398 | Msa1042280:CDS |
| TGTCCGTTTCCAATGTCCGG+AGG | 0.642696 | 7_1:-80112678 | None:intergenic |
| AGAAGCACGGAGAATACGAA+GGG | 0.646379 | 7_1:+80110988 | Msa1042280:CDS |
| TAAGTCAATACACACTGTAG+TGG | 0.646969 | 7_1:+80112359 | Msa1042280:CDS |
| AATGCTTCAGGCTCTGAGTG+AGG | 0.647299 | 7_1:+80111945 | Msa1042280:intron |
| TGTTGAAGATACCTTGGTGA+TGG | 0.647819 | 7_1:-80113024 | None:intergenic |
| CTAGGCAAACAATTCGCCGT+AGG | 0.651761 | 7_1:+80111032 | Msa1042280:CDS |
| GGACATGGAAACATGTACAA+AGG | 0.654634 | 7_1:-80112642 | None:intergenic |
| AAGAAGCACGGAGAATACGA+AGG | 0.656333 | 7_1:+80110987 | Msa1042280:CDS |
| ACCGTAGGAGGATCCGAGTG+AGG | 0.660775 | 7_1:-80109188 | None:intergenic |
| AGATCCTCCCGTGAAGACGG+AGG | 0.667295 | 7_1:+80109043 | Msa1042280:CDS |
| TTCACGGGAGGATCTTCCGA+CGG | 0.678112 | 7_1:-80109035 | None:intergenic |
| ACATTCCACTTCCATCACCA+AGG | 0.678562 | 7_1:+80113013 | Msa1042280:CDS |
| TCCGGAGGAGGGTATAACCA+AGG | 0.679455 | 7_1:-80112663 | None:intergenic |
| GTACTACATTGTTCACCTAG+AGG | 0.688797 | 7_1:-80112744 | None:intergenic |
| TCATCTTCTAGGCCACAGGA+AGG | 0.693110 | 7_1:-80112708 | None:intergenic |
| GAAGACGGAGGAGATTGAGG+CGG | 0.693834 | 7_1:+80109055 | Msa1042280:CDS |
| TTGGGTGCAACATATATCGG+CGG | 0.707534 | 7_1:-80109129 | None:intergenic |
| GTCGAGACGGAATTTAACCG+AGG | 0.731809 | 7_1:+80110888 | Msa1042280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTGACAATAATTTAAA+AGG | + | chr7_1:80109453-80109472 | Msa1042280:intron | 10.0% |
| !! | TATAATAATTGAATACAATT+TGG | + | chr7_1:80109664-80109683 | Msa1042280:intron | 10.0% |
| !!! | TTTTGAAATGATTTAATTTA+TGG | + | chr7_1:80110716-80110735 | Msa1042280:intron | 10.0% |
| !!! | ATGAATTTTGTTATAATAAT+TGG | + | chr7_1:80111324-80111343 | Msa1042280:intron | 10.0% |
| !!! | GTTTCAAAATCATTTTTTAA+TGG | - | chr7_1:80109433-80109452 | None:intergenic | 15.0% |
| !! | AATAATTTAAAAGGTTAACA+TGG | + | chr7_1:80109462-80109481 | Msa1042280:intron | 15.0% |
| !!! | TATAATTAACCATGATTTTT+AGG | + | chr7_1:80109565-80109584 | Msa1042280:intron | 15.0% |
| !!! | TTTTTTTTTTTGACAAAAGT+TGG | + | chr7_1:80109708-80109727 | Msa1042280:intron | 15.0% |
| !!! | GAAATTTTATTTTCAACAAA+TGG | + | chr7_1:80109864-80109883 | Msa1042280:intron | 15.0% |
| !!! | ATTTCATTTTATCCTTATTT+GGG | + | chr7_1:80110107-80110126 | Msa1042280:intron | 15.0% |
| !!! | TTTGTTTATTGAATTGATTT+TGG | + | chr7_1:80110477-80110496 | Msa1042280:intron | 15.0% |
| !!! | CTGAATTTTTTAAAGTATAA+GGG | - | chr7_1:80111797-80111816 | None:intergenic | 15.0% |
| !!! | CTTATACTTTAAAAAATTCA+GGG | + | chr7_1:80111796-80111815 | Msa1042280:intron | 15.0% |
| !! | AAATTATAGGGATTAATAAA+AGG | - | chr7_1:80111851-80111870 | None:intergenic | 15.0% |
| !! | AATAGTATAATCATGTCTTA+CGG | - | chr7_1:80109287-80109306 | None:intergenic | 20.0% |
| !! | ATTAAAATATATGCAGACTA+TGG | - | chr7_1:80109358-80109377 | None:intergenic | 20.0% |
| !! | TTAATTCACTTCTTTATCAT+CGG | - | chr7_1:80109388-80109407 | None:intergenic | 20.0% |
| !! | TCATGGTTAATTATATTAAG+TGG | - | chr7_1:80109560-80109579 | None:intergenic | 20.0% |
| !! | AAATATACACCTAAAAATCA+TGG | - | chr7_1:80109577-80109596 | None:intergenic | 20.0% |
| !! | TTAGTAGCATCATATATATT+TGG | + | chr7_1:80109737-80109756 | Msa1042280:intron | 20.0% |
| !! | AATATAAGTTGTTAAAACAC+AGG | - | chr7_1:80109793-80109812 | None:intergenic | 20.0% |
| !!! | CATTTCATTTTATCCTTATT+TGG | + | chr7_1:80110106-80110125 | Msa1042280:intron | 20.0% |
| !!! | TTTCATTTTATCCTTATTTG+GGG | + | chr7_1:80110108-80110127 | Msa1042280:intron | 20.0% |
| !!! | ATTGTATACACATGAATTTT+TGG | + | chr7_1:80110192-80110211 | Msa1042280:intron | 20.0% |
| !!! | TTGTATACACATGAATTTTT+GGG | + | chr7_1:80110193-80110212 | Msa1042280:intron | 20.0% |
| !! | AAAACATGTCTAATATTTGT+TGG | + | chr7_1:80110279-80110298 | Msa1042280:intron | 20.0% |
| !!! | TCTTGTTATTTTGTTACTTA+TGG | + | chr7_1:80110563-80110582 | Msa1042280:intron | 20.0% |
| !!! | AACTTAATTATTTGTTTTCC+TGG | + | chr7_1:80110607-80110626 | Msa1042280:intron | 20.0% |
| !!! | AAATGATTTAATTTATGGCA+GGG | + | chr7_1:80110721-80110740 | Msa1042280:intron | 20.0% |
| !!! | TTTCTTTTACTTCAATTTCT+AGG | + | chr7_1:80110926-80110945 | Msa1042280:intron | 20.0% |
| !!! | TTCTTTTACTTCAATTTCTA+GGG | + | chr7_1:80110927-80110946 | Msa1042280:intron | 20.0% |
| !!! | AAGAATATGTGTTTTTAAAC+TGG | - | chr7_1:80111673-80111692 | None:intergenic | 20.0% |
| !! | TTAAAAACACATATTCTTAC+AGG | + | chr7_1:80111675-80111694 | Msa1042280:intron | 20.0% |
| !!! | CCTGAATTTTTTAAAGTATA+AGG | - | chr7_1:80111798-80111817 | None:intergenic | 20.0% |
| !!! | CCTTATACTTTAAAAAATTC+AGG | + | chr7_1:80111795-80111814 | Msa1042280:intron | 20.0% |
| !!! | TTTTTCATTGAAATATTGAG+TGG | + | chr7_1:80111903-80111922 | Msa1042280:intron | 20.0% |
| !! | TTGCAAAAGTAAATATATAC+TGG | + | chr7_1:80112304-80112323 | Msa1042280:intron | 20.0% |
| ! | GTTAACATGGTTTAATTATG+TGG | + | chr7_1:80109475-80109494 | Msa1042280:intron | 25.0% |
| ! | AACAAATTGTCATGACTTAT+TGG | + | chr7_1:80109530-80109549 | Msa1042280:intron | 25.0% |
| ! | GGTTAATTATATTAAGTGGA+TGG | - | chr7_1:80109556-80109575 | None:intergenic | 25.0% |
| !!! | GATTTTTAGGTGTATATTTG+AGG | + | chr7_1:80109578-80109597 | Msa1042280:intron | 25.0% |
| ! | ATACAATTTGGATGTTTAGT+TGG | + | chr7_1:80109676-80109695 | Msa1042280:intron | 25.0% |
| !!! | ATTTGGACACTTTAAAATCA+TGG | + | chr7_1:80109754-80109773 | Msa1042280:intron | 25.0% |
| !! | TGTTACTTGGTTTATAGAAA+AGG | - | chr7_1:80109903-80109922 | None:intergenic | 25.0% |
| ! | GATATCGTAACTTAGTTTAT+AGG | - | chr7_1:80109937-80109956 | None:intergenic | 25.0% |
| !! | ACTATTAATTTTTCCGCTTT+AGG | + | chr7_1:80110026-80110045 | Msa1042280:intron | 25.0% |
| ! | TTAGGATGTATTCACTTTAA+AGG | + | chr7_1:80110044-80110063 | Msa1042280:intron | 25.0% |
| !!! | GTTATTTTCTTCATTCCTTA+TGG | + | chr7_1:80110540-80110559 | Msa1042280:intron | 25.0% |
| ! | AACAAAATAACAAGACCATA+AGG | - | chr7_1:80110558-80110577 | None:intergenic | 25.0% |
| !! | TTTTCCTGGTATAGTAAAAA+TGG | + | chr7_1:80110621-80110640 | Msa1042280:intron | 25.0% |
| !!! | TTATCCATTTTTACTATACC+AGG | - | chr7_1:80110628-80110647 | None:intergenic | 25.0% |
| ! | CATCCAATTCCAATAATTAA+AGG | + | chr7_1:80110660-80110679 | Msa1042280:intron | 25.0% |
| ! | ACTCCTTTAATTATTGGAAT+TGG | - | chr7_1:80110666-80110685 | None:intergenic | 25.0% |
| ! | GGTAATACTCCTTTAATTAT+TGG | - | chr7_1:80110672-80110691 | None:intergenic | 25.0% |
| !!! | TACCAAGTTGAAACATTTTA+TGG | + | chr7_1:80110688-80110707 | Msa1042280:intron | 25.0% |
| !! | GAAATGATTTAATTTATGGC+AGG | + | chr7_1:80110720-80110739 | Msa1042280:intron | 25.0% |
| ! | AATTACATTCTCTTATACCT+CGG | - | chr7_1:80110908-80110927 | None:intergenic | 25.0% |
| !!! | GTGTGTTTAGTTTAGATTTT+GGG | - | chr7_1:80111111-80111130 | None:intergenic | 25.0% |
| !!! | TGTGTGTTTAGTTTAGATTT+TGG | - | chr7_1:80111112-80111131 | None:intergenic | 25.0% |
| ! | AATCTAAACTAAACACACAT+TGG | + | chr7_1:80111113-80111132 | Msa1042280:intron | 25.0% |
| ! | ATAGCATATAAAAACACATG+TGG | - | chr7_1:80111179-80111198 | None:intergenic | 25.0% |
| ! | CTCTTCATATTAGTCAAAAT+AGG | - | chr7_1:80111289-80111308 | None:intergenic | 25.0% |
| ! | TTATAACAAAATTCATGTGC+TGG | - | chr7_1:80111320-80111339 | None:intergenic | 25.0% |
| !!! | TAAGCTTTGAAAAATAAGAG+AGG | - | chr7_1:80111492-80111511 | None:intergenic | 25.0% |
| !!! | GTGTAGATTTTAGAATCTTT+TGG | - | chr7_1:80111702-80111721 | None:intergenic | 25.0% |
| !! | TCTTTTGTATAAAATGCTTC+AGG | + | chr7_1:80111933-80111952 | Msa1042280:intron | 25.0% |
| ! | AGATGAAATTAATTGAGAAG+CGG | - | chr7_1:80112111-80112130 | None:intergenic | 25.0% |
| ! | AAATGGTTATAAAGAAACCA+TGG | - | chr7_1:80112447-80112466 | None:intergenic | 25.0% |
| ! | AATTGAACTTGATTAGATGA+AGG | - | chr7_1:80112504-80112523 | None:intergenic | 25.0% |
| ! | ACTTTATCCTTAAATAGTGT+AGG | + | chr7_1:80112768-80112787 | Msa1042280:CDS | 25.0% |
| !! | TTTTCAATAATGTGACATCT+TGG | - | chr7_1:80112924-80112943 | None:intergenic | 25.0% |
| TAGTTGAATCGCTTATGAAT+AGG | - | chr7_1:80109166-80109185 | None:intergenic | 30.0% | |
| ! | GGATAATCTTTTAGTGCATA+TGG | + | chr7_1:80109496-80109515 | Msa1042280:intron | 30.0% |
| AAAGTGAATACATCCTAAAG+CGG | - | chr7_1:80110042-80110061 | None:intergenic | 30.0% | |
| !! | AGCTTGTTGTATTCATACAT+TGG | - | chr7_1:80110258-80110277 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGTTAAATAG+AGG | + | chr7_1:80110381-80110400 | Msa1042280:intron | 30.0% |
| !!! | TGAATTGATTTTGGTTTTGC+TGG | + | chr7_1:80110486-80110505 | Msa1042280:intron | 30.0% |
| TGAAGAAAATAACTCAGACA+CGG | - | chr7_1:80110533-80110552 | None:intergenic | 30.0% | |
| CTCCATAAAATGTTTCAACT+TGG | - | chr7_1:80110693-80110712 | None:intergenic | 30.0% | |
| !! | CAAGTTGAAACATTTTATGG+AGG | + | chr7_1:80110691-80110710 | Msa1042280:intron | 30.0% |
| !!! | CTGAATCCTTTCTGTTTTTA+CGG | - | chr7_1:80110797-80110816 | None:intergenic | 30.0% |
| TGACTGCTTAAAAAACATGA+AGG | + | chr7_1:80110822-80110841 | Msa1042280:CDS | 30.0% | |
| AATTTACTGAGTTTCTGTTC+AGG | + | chr7_1:80110958-80110977 | Msa1042280:intron | 30.0% | |
| GTCATAAGCAAATCTAACAA+CGG | - | chr7_1:80111086-80111105 | None:intergenic | 30.0% | |
| TTACTTCTTAGTCAAATGTG+TGG | + | chr7_1:80111198-80111217 | Msa1042280:intron | 30.0% | |
| TACAAATTTACTTGTTCAGC+AGG | - | chr7_1:80111770-80111789 | None:intergenic | 30.0% | |
| AGAGATCGGTGTAAATTATA+GGG | - | chr7_1:80111863-80111882 | None:intergenic | 30.0% | |
| GACTACTAATAAGCTCTTAA+AGG | + | chr7_1:80112223-80112242 | Msa1042280:CDS | 30.0% | |
| ATGCAAGAAATCTTTGAGTA+TGG | + | chr7_1:80112266-80112285 | Msa1042280:intron | 30.0% | |
| TGCAAGAAATCTTTGAGTAT+GGG | + | chr7_1:80112267-80112286 | Msa1042280:intron | 30.0% | |
| ATAACTGTCTAACTGGAAAA+TGG | - | chr7_1:80112464-80112483 | None:intergenic | 30.0% | |
| ! | TTCCAGTTAGACAGTTATTT+TGG | + | chr7_1:80112466-80112485 | Msa1042280:CDS | 30.0% |
| ! | GTCTCTGATTGTCATTTATT+AGG | - | chr7_1:80112617-80112636 | None:intergenic | 30.0% |
| TCCTTAAATAGTGTAGGAAA+TGG | + | chr7_1:80112774-80112793 | Msa1042280:CDS | 30.0% | |
| CCTTAAATAGTGTAGGAAAT+GGG | + | chr7_1:80112775-80112794 | Msa1042280:CDS | 30.0% | |
| CTTAAATAGTGTAGGAAATG+GGG | + | chr7_1:80112776-80112795 | Msa1042280:CDS | 30.0% | |
| CACATTATTGAAAAGTTCCA+TGG | + | chr7_1:80112930-80112949 | Msa1042280:CDS | 30.0% | |
| TAACCATTACAATTAACTGC+AGG | - | chr7_1:80112957-80112976 | None:intergenic | 30.0% | |
| ACCACACGAATCAACTATAA+CGG | + | chr7_1:80109331-80109350 | Msa1042280:intron | 35.0% | |
| TAGTTGTCAAATAGCAGCTA+TGG | + | chr7_1:80110302-80110321 | Msa1042280:intron | 35.0% | |
| !! | TGTTTTTACGGATGTAGAAC+TGG | - | chr7_1:80110785-80110804 | None:intergenic | 35.0% |
| CTACATCCGTAAAAACAGAA+AGG | + | chr7_1:80110788-80110807 | Msa1042280:CDS | 35.0% | |
| CTGCTTAAAAAACATGAAGG+TGG | + | chr7_1:80110825-80110844 | Msa1042280:CDS | 35.0% | |
| ! | TATTGGAGTGAGTAGTCTTA+GGG | - | chr7_1:80110867-80110886 | None:intergenic | 35.0% |
| TTATTGGAGTGAGTAGTCTT+AGG | - | chr7_1:80110868-80110887 | None:intergenic | 35.0% | |
| TAAATTCCGTCTCGACTTAT+TGG | - | chr7_1:80110884-80110903 | None:intergenic | 35.0% | |
| TTCAGGAAGAAAAAGAAGCA+CGG | + | chr7_1:80110975-80110994 | Msa1042280:intron | 35.0% | |
| TGCCTAACCACATTAACTTT+GGG | - | chr7_1:80111230-80111249 | None:intergenic | 35.0% | |
| ATGCCTAACCACATTAACTT+TGG | - | chr7_1:80111231-80111250 | None:intergenic | 35.0% | |
| ! | GCTGTCAATCTCTACATTTT+GGG | - | chr7_1:80111365-80111384 | None:intergenic | 35.0% |
| ! | TGCTGTCAATCTCTACATTT+TGG | - | chr7_1:80111366-80111385 | None:intergenic | 35.0% |
| ATGGTAACAGACTAACAGTA+AGG | - | chr7_1:80111398-80111417 | None:intergenic | 35.0% | |
| TTACAAGCATTACTGCATGT+GGG | - | chr7_1:80111429-80111448 | None:intergenic | 35.0% | |
| CATTGCAGTCATTGCAAAAT+GGG | - | chr7_1:80111463-80111482 | None:intergenic | 35.0% | |
| ACATTGCAGTCATTGCAAAA+TGG | - | chr7_1:80111464-80111483 | None:intergenic | 35.0% | |
| TTTGCAATGACTGCAATGTT+TGG | + | chr7_1:80111465-80111484 | Msa1042280:intron | 35.0% | |
| ACTTGTTCAGCAGGTAATTT+GGG | - | chr7_1:80111761-80111780 | None:intergenic | 35.0% | |
| TACTTGTTCAGCAGGTAATT+TGG | - | chr7_1:80111762-80111781 | None:intergenic | 35.0% | |
| GAGAGATCGGTGTAAATTAT+AGG | - | chr7_1:80111864-80111883 | None:intergenic | 35.0% | |
| ! | GTTTTCATTTTCCATCGCTA+AGG | - | chr7_1:80111992-80112011 | None:intergenic | 35.0% |
| TGGAAAATGAAAACCTGAAG+AGG | + | chr7_1:80111998-80112017 | Msa1042280:CDS | 35.0% | |
| GGAAAATGAAAACCTGAAGA+GGG | + | chr7_1:80111999-80112018 | Msa1042280:CDS | 35.0% | |
| ! | AAAGAGGAAGGGAGTATAAT+TGG | - | chr7_1:80112042-80112061 | None:intergenic | 35.0% |
| TTAAGCCCAACAGAATAAAG+AGG | - | chr7_1:80112058-80112077 | None:intergenic | 35.0% | |
| !! | CATTTCTGGTGAAAAGAAGA+AGG | + | chr7_1:80112169-80112188 | Msa1042280:intron | 35.0% |
| TAAGTCAATACACACTGTAG+TGG | + | chr7_1:80112359-80112378 | Msa1042280:CDS | 35.0% | |
| TTGATTAGATGAAGGAAGGA+TGG | - | chr7_1:80112496-80112515 | None:intergenic | 35.0% | |
| GAACTTGATTAGATGAAGGA+AGG | - | chr7_1:80112500-80112519 | None:intergenic | 35.0% | |
| GGAATGGCAATGGAATTAAA+TGG | - | chr7_1:80112537-80112556 | None:intergenic | 35.0% | |
| TACATATACATGCGATGGAA+TGG | - | chr7_1:80112553-80112572 | None:intergenic | 35.0% | |
| GATTATCCTGTTCATCTTCT+AGG | - | chr7_1:80112722-80112741 | None:intergenic | 35.0% | |
| CCCATTTCCTACACTATTTA+AGG | - | chr7_1:80112778-80112797 | None:intergenic | 35.0% | |
| ! | GCTTCTGTTTTCAGTTTGAT+GGG | - | chr7_1:80112819-80112838 | None:intergenic | 35.0% |
| ! | AGCTTCTGTTTTCAGTTTGA+TGG | - | chr7_1:80112820-80112839 | None:intergenic | 35.0% |
| AAGAAAAACTTGGAGTAGCA+TGG | - | chr7_1:80112881-80112900 | None:intergenic | 35.0% | |
| ! | ACTCCAAGTTTTTCTTCAGA+TGG | + | chr7_1:80112885-80112904 | Msa1042280:CDS | 35.0% |
| AGTGGAATGTAATTGAAGCT+CGG | - | chr7_1:80113003-80113022 | None:intergenic | 35.0% | |
| TTCTCATATCACAACTTCAC+AGG | + | chr7_1:80113049-80113068 | Msa1042280:CDS | 35.0% | |
| GAAGAGGAAGATGAAGAAGT+GGG | - | chr7_1:80109005-80109024 | None:intergenic | 40.0% | |
| AGAAGAGGAAGATGAAGAAG+TGG | - | chr7_1:80109006-80109025 | None:intergenic | 40.0% | |
| TGGTTGGGTGCAACATATAT+CGG | - | chr7_1:80109135-80109154 | None:intergenic | 40.0% | |
| TGAATCGCTTATGAATAGGC+AGG | - | chr7_1:80109162-80109181 | None:intergenic | 40.0% | |
| CGATTCAACTATTCCTCACT+CGG | + | chr7_1:80109175-80109194 | Msa1042280:CDS | 40.0% | |
| AAGCTAATTACCCTAACCGT+AGG | - | chr7_1:80109206-80109225 | None:intergenic | 40.0% | |
| !! | TCCGTTATAGTTGATTCGTG+TGG | - | chr7_1:80109335-80109354 | None:intergenic | 40.0% |
| ! | GGAAAAGTTGACGTGTTACT+TGG | - | chr7_1:80109916-80109935 | None:intergenic | 40.0% |
| CTCTATTCTGTCCCCAAATA+AGG | - | chr7_1:80110122-80110141 | None:intergenic | 40.0% | |
| CAAATAGCAGCTATGGTTAG+CGG | + | chr7_1:80110309-80110328 | Msa1042280:intron | 40.0% | |
| GTGTTGTCAATCGCATATTG+TGG | - | chr7_1:80110452-80110471 | None:intergenic | 40.0% | |
| TTGCTGGTACTCCTTGTTAA+TGG | + | chr7_1:80110502-80110521 | Msa1042280:intron | 40.0% | |
| ACACGGATGTTCCATTAACA+AGG | - | chr7_1:80110516-80110535 | None:intergenic | 40.0% | |
| ! | GTGAGTAGTCTTAGGGTAAT+AGG | - | chr7_1:80110860-80110879 | None:intergenic | 40.0% |
| CCAATGTAAATACCTGCCTA+CGG | - | chr7_1:80111051-80111070 | None:intergenic | 40.0% | |
| GTTGTGACCCAAAGTTAATG+TGG | + | chr7_1:80111220-80111239 | Msa1042280:intron | 40.0% | |
| GACCCAAAGTTAATGTGGTT+AGG | + | chr7_1:80111225-80111244 | Msa1042280:intron | 40.0% | |
| AATAATTGGATGTGTCCTCC+AGG | + | chr7_1:80111338-80111357 | Msa1042280:intron | 40.0% | |
| !!! | AATCTCTACATTTTGGGACC+TGG | - | chr7_1:80111359-80111378 | None:intergenic | 40.0% |
| GTTACAAGCATTACTGCATG+TGG | - | chr7_1:80111430-80111449 | None:intergenic | 40.0% | |
| GGGCTTGTATACAAGAAAAG+TGG | + | chr7_1:80111816-80111835 | Msa1042280:intron | 40.0% | |
| ! | TTCATTTTCCATCGCTAAGG+TGG | - | chr7_1:80111989-80112008 | None:intergenic | 40.0% |
| ! | AGAAAAAGCATACCCTCTTC+AGG | - | chr7_1:80112014-80112033 | None:intergenic | 40.0% |
| TCCCTTCCTCTTTATTCTGT+TGG | + | chr7_1:80112049-80112068 | Msa1042280:intron | 40.0% | |
| CCCAACAGAATAAAGAGGAA+GGG | - | chr7_1:80112053-80112072 | None:intergenic | 40.0% | |
| CCCTTCCTCTTTATTCTGTT+GGG | + | chr7_1:80112050-80112069 | Msa1042280:intron | 40.0% | |
| !!! | TTTTCCGCATGTGTCATTTC+TGG | + | chr7_1:80112155-80112174 | Msa1042280:intron | 40.0% |
| TTCACCAGAAATGACACATG+CGG | - | chr7_1:80112162-80112181 | None:intergenic | 40.0% | |
| TGGTGAAAAGAAGAAGGAGT+CGG | + | chr7_1:80112175-80112194 | Msa1042280:intron | 40.0% | |
| GGCCAAAATAACTGTCTAAC+TGG | - | chr7_1:80112471-80112490 | None:intergenic | 40.0% | |
| TTAGATGAAGGAAGGATGGA+GGG | - | chr7_1:80112492-80112511 | None:intergenic | 40.0% | |
| ATTAGATGAAGGAAGGATGG+AGG | - | chr7_1:80112493-80112512 | None:intergenic | 40.0% | |
| CATGGTACATATACATGCGA+TGG | - | chr7_1:80112558-80112577 | None:intergenic | 40.0% | |
| GGACATGGAAACATGTACAA+AGG | - | chr7_1:80112645-80112664 | None:intergenic | 40.0% | |
| TGTACATGTTTCCATGTCCT+TGG | + | chr7_1:80112646-80112665 | Msa1042280:CDS | 40.0% | |
| GAACAGGATAATCTTCCTCT+AGG | + | chr7_1:80112729-80112748 | Msa1042280:CDS | 40.0% | |
| GTACTACATTGTTCACCTAG+AGG | - | chr7_1:80112747-80112766 | None:intergenic | 40.0% | |
| TGAAAACAGAAGCTTCTGAC+TGG | + | chr7_1:80112826-80112845 | Msa1042280:CDS | 40.0% | |
| GAAAACAGAAGCTTCTGACT+GGG | + | chr7_1:80112827-80112846 | Msa1042280:CDS | 40.0% | |
| TCCAGATCTAGTAATGACCT+TGG | + | chr7_1:80112855-80112874 | Msa1042280:CDS | 40.0% | |
| CCTCCATCTGAAGAAAAACT+TGG | - | chr7_1:80112891-80112910 | None:intergenic | 40.0% | |
| ! | CCAAGTTTTTCTTCAGATGG+AGG | + | chr7_1:80112888-80112907 | Msa1042280:CDS | 40.0% |
| TACAATTAACTGCAGGTCCA+TGG | - | chr7_1:80112950-80112969 | None:intergenic | 40.0% | |
| GGACCTGCAGTTAATTGTAA+TGG | + | chr7_1:80112951-80112970 | Msa1042280:CDS | 40.0% | |
| GTGGAATGTAATTGAAGCTC+GGG | - | chr7_1:80113002-80113021 | None:intergenic | 40.0% | |
| TGTTGAAGATACCTTGGTGA+TGG | - | chr7_1:80113027-80113046 | None:intergenic | 40.0% | |
| AGAAGCTGTTGAAGATACCT+TGG | - | chr7_1:80113033-80113052 | None:intergenic | 40.0% | |
| ! | CATCCACTAGATTTTTGCCT+GGG | - | chr7_1:80113100-80113119 | None:intergenic | 40.0% |
| TTGGGTGCAACATATATCGG+CGG | - | chr7_1:80109132-80109151 | None:intergenic | 45.0% | |
| CTTATGAATAGGCAGGTGTC+TGG | - | chr7_1:80109155-80109174 | None:intergenic | 45.0% | |
| CTAATTACCCTAACCGTAGG+AGG | - | chr7_1:80109203-80109222 | None:intergenic | 45.0% | |
| ! | ATAGAGAGCACACAGAACGT+CGG | - | chr7_1:80110153-80110172 | None:intergenic | 45.0% |
| CTCACTCCAATAAGTCGAGA+CGG | + | chr7_1:80110875-80110894 | Msa1042280:CDS | 45.0% | |
| ! | AAGAAGCACGGAGAATACGA+AGG | + | chr7_1:80110987-80111006 | Msa1042280:CDS | 45.0% |
| ! | AGAAGCACGGAGAATACGAA+GGG | + | chr7_1:80110988-80111007 | Msa1042280:CDS | 45.0% |
| ! | ACGGAGAATACGAAGGGTAT+TGG | + | chr7_1:80110994-80111013 | Msa1042280:CDS | 45.0% |
| TGGCAAATAGAGAGTCAGCT+AGG | + | chr7_1:80111014-80111033 | Msa1042280:CDS | 45.0% | |
| CCGTAGGCAGGTATTTACAT+TGG | + | chr7_1:80111048-80111067 | Msa1042280:intron | 45.0% | |
| AACACACATTGGCACATGCT+TGG | + | chr7_1:80111124-80111143 | Msa1042280:intron | 45.0% | |
| CTGCATGTGGGTCAAAAACA+TGG | - | chr7_1:80111417-80111436 | None:intergenic | 45.0% | |
| GCCCAACAGAATAAAGAGGA+AGG | - | chr7_1:80112054-80112073 | None:intergenic | 45.0% | |
| ATAGACAACTCCTGCACAAC+AGG | - | chr7_1:80112393-80112412 | None:intergenic | 45.0% | |
| !! | AGAAACCATGGACTAGTACC+AGG | - | chr7_1:80112435-80112454 | None:intergenic | 45.0% |
| TACATGCGATGGAATGGCAA+TGG | - | chr7_1:80112547-80112566 | None:intergenic | 45.0% | |
| GATTCAGACTCAGAAGAGCA+TGG | - | chr7_1:80112576-80112595 | None:intergenic | 45.0% | |
| GCCAAGGTCATTACTAGATC+TGG | - | chr7_1:80112859-80112878 | None:intergenic | 45.0% | |
| ACATTCCACTTCCATCACCA+AGG | + | chr7_1:80113013-80113032 | Msa1042280:CDS | 45.0% | |
| !! | AGATACCTTGGTGATGGAAG+TGG | - | chr7_1:80113021-80113040 | None:intergenic | 45.0% |
| CAAGAACAGTTCATATGCCC+AGG | + | chr7_1:80113080-80113099 | Msa1042280:CDS | 45.0% | |
| ATGCCCAGGCAAAAATCTAG+TGG | + | chr7_1:80113094-80113113 | Msa1042280:CDS | 45.0% | |
| ! | GCATCCACTAGATTTTTGCC+TGG | - | chr7_1:80113101-80113120 | None:intergenic | 45.0% |
| GCATTCAAAGCAGACAGTCT+AGG | + | chr7_1:80113174-80113193 | Msa1042280:CDS | 45.0% | |
| TCAAAGCAGACAGTCTAGGA+TGG | + | chr7_1:80113178-80113197 | Msa1042280:CDS | 45.0% | |
| !! | TTAAAATTGAATTATAATTA+AGG | - | chr7_1:80109250-80109269 | None:intergenic | 5.0% |
| !!! | TAATTATAATTCAATTTTAA+CGG | + | chr7_1:80109250-80109269 | Msa1042280:intron | 5.0% |
| CTCTTCTTCCTCATGTCCGT+CGG | + | chr7_1:80109019-80109038 | Msa1042280:CDS | 50.0% | |
| TCAATCTCCTCCGTCTTCAC+GGG | - | chr7_1:80109053-80109072 | None:intergenic | 50.0% | |
| CTCAATCTCCTCCGTCTTCA+CGG | - | chr7_1:80109054-80109073 | None:intergenic | 50.0% | |
| TATCGGCGGAATGAGCTGTA+TGG | - | chr7_1:80109118-80109137 | None:intergenic | 50.0% | |
| GAATAGGCAGGTGTCTGGTT+GGG | - | chr7_1:80109150-80109169 | None:intergenic | 50.0% | |
| TGAATAGGCAGGTGTCTGGT+TGG | - | chr7_1:80109151-80109170 | None:intergenic | 50.0% | |
| GTCGAGACGGAATTTAACCG+AGG | + | chr7_1:80110888-80110907 | Msa1042280:CDS | 50.0% | |
| CTAGGCAAACAATTCGCCGT+AGG | + | chr7_1:80111032-80111051 | Msa1042280:CDS | 50.0% | |
| ! | TTGGCACATGCTTGGTGACT+TGG | + | chr7_1:80111132-80111151 | Msa1042280:intron | 50.0% |
| !!! | CTCTACATTTTGGGACCTGG+AGG | - | chr7_1:80111356-80111375 | None:intergenic | 50.0% |
| ACACCGATCTCTCGTTGTTC+TGG | + | chr7_1:80111871-80111890 | Msa1042280:intron | 50.0% | |
| CAGCCAGAACAACGAGAGAT+CGG | - | chr7_1:80111877-80111896 | None:intergenic | 50.0% | |
| !! | AATGCTTCAGGCTCTGAGTG+AGG | + | chr7_1:80111945-80111964 | Msa1042280:intron | 50.0% |
| AAAAGCTGCCACCTTAGCGA+TGG | + | chr7_1:80111978-80111997 | Msa1042280:CDS | 50.0% | |
| GGAGAAAACTCCTGTTGTGC+AGG | + | chr7_1:80112380-80112399 | Msa1042280:CDS | 50.0% | |
| ! | GGAGGGTATAACCAAGGACA+TGG | - | chr7_1:80112660-80112679 | None:intergenic | 50.0% |
| TCCTTGGTTATACCCTCCTC+CGG | + | chr7_1:80112662-80112681 | Msa1042280:CDS | 50.0% | |
| TTATACCCTCCTCCGGACAT+TGG | + | chr7_1:80112669-80112688 | Msa1042280:CDS | 50.0% | |
| GGTTGTCCGTTTCCAATGTC+CGG | - | chr7_1:80112684-80112703 | None:intergenic | 50.0% | |
| TCATCTTCTAGGCCACAGGA+AGG | - | chr7_1:80112711-80112730 | None:intergenic | 50.0% | |
| CTGTTCATCTTCTAGGCCAC+AGG | - | chr7_1:80112715-80112734 | None:intergenic | 50.0% | |
| CTGTGGCCTAGAAGATGAAC+AGG | + | chr7_1:80112713-80112732 | Msa1042280:CDS | 50.0% | |
| AACTTGGAGTAGCATGGCCA+AGG | - | chr7_1:80112875-80112894 | None:intergenic | 50.0% | |
| CGACGGACATGAGGAAGAAG+AGG | - | chr7_1:80109021-80109040 | None:intergenic | 55.0% | |
| AGGATCTTCCGACGGACATG+AGG | - | chr7_1:80109030-80109049 | None:intergenic | 55.0% | |
| TTCACGGGAGGATCTTCCGA+CGG | - | chr7_1:80109038-80109057 | None:intergenic | 55.0% | |
| GGAAGATCCTCCCGTGAAGA+CGG | + | chr7_1:80109040-80109059 | Msa1042280:CDS | 55.0% | |
| CGTGAAGACGGAGGAGATTG+AGG | + | chr7_1:80109052-80109071 | Msa1042280:CDS | 55.0% | |
| GAAGACGGAGGAGATTGAGG+CGG | + | chr7_1:80109055-80109074 | Msa1042280:CDS | 55.0% | |
| TCCTCACTCGGATCCTCCTA+CGG | + | chr7_1:80109187-80109206 | Msa1042280:CDS | 55.0% | |
| ACTCGGATCCTCCTACGGTT+AGG | + | chr7_1:80109192-80109211 | Msa1042280:CDS | 55.0% | |
| CTCGGATCCTCCTACGGTTA+GGG | + | chr7_1:80109193-80109212 | Msa1042280:CDS | 55.0% | |
| !! | GCTGCTGACTTGCAACAGCT+TGG | - | chr7_1:80110747-80110766 | None:intergenic | 55.0% |
| GCAAACAATTCGCCGTAGGC+AGG | + | chr7_1:80111036-80111055 | Msa1042280:CDS | 55.0% | |
| GCAGGAGTTGTCTATGTCCG+AGG | + | chr7_1:80112398-80112417 | Msa1042280:CDS | 55.0% | |
| ACCAGGTGCAGGTGATACCT+CGG | - | chr7_1:80112418-80112437 | None:intergenic | 55.0% | |
| !! | CATGGACTAGTACCAGGTGC+AGG | - | chr7_1:80112429-80112448 | None:intergenic | 55.0% |
| CTGCACCTGGTACTAGTCCA+TGG | + | chr7_1:80112427-80112446 | Msa1042280:CDS | 55.0% | |
| ! | TCCGGAGGAGGGTATAACCA+AGG | - | chr7_1:80112666-80112685 | None:intergenic | 55.0% |
| CGTTTCCAATGTCCGGAGGA+GGG | - | chr7_1:80112677-80112696 | None:intergenic | 55.0% | |
| CCTCCTCCGGACATTGGAAA+CGG | + | chr7_1:80112675-80112694 | Msa1042280:CDS | 55.0% | |
| TGTCCGTTTCCAATGTCCGG+AGG | - | chr7_1:80112681-80112700 | None:intergenic | 55.0% | |
| TCTTCTAGGCCACAGGAAGG+TGG | - | chr7_1:80112708-80112727 | None:intergenic | 55.0% | |
| ! | AGAGGCACGGAAGAGGAGAA+AGG | + | chr7_1:80113133-80113152 | Msa1042280:CDS | 55.0% |
| AGATCCTCCCGTGAAGACGG+AGG | + | chr7_1:80109043-80109062 | Msa1042280:CDS | 60.0% | |
| ATCTCCTCCGTCTTCACGGG+AGG | - | chr7_1:80109050-80109069 | None:intergenic | 60.0% | |
| GGCGGAGACTCTTGCTTACC+TGG | + | chr7_1:80109076-80109095 | Msa1042280:CDS | 60.0% | |
| ACCGTAGGAGGATCCGAGTG+AGG | - | chr7_1:80109191-80109210 | None:intergenic | 60.0% | |
| ! | TCCGAGGTATCACCTGCACC+TGG | + | chr7_1:80112414-80112433 | Msa1042280:CDS | 60.0% |
| CCGTTTCCAATGTCCGGAGG+AGG | - | chr7_1:80112678-80112697 | None:intergenic | 60.0% | |
| GGACAACCACCACCTTCCTG+TGG | + | chr7_1:80112696-80112715 | Msa1042280:CDS | 60.0% | |
| TCTAGGCCACAGGAAGGTGG+TGG | - | chr7_1:80112705-80112724 | None:intergenic | 60.0% | |
| GGATGCAGTTGCTGCAGCAG+AGG | + | chr7_1:80113115-80113134 | Msa1042280:CDS | 60.0% | |
| CAGTTGCTGCAGCAGAGGCA+CGG | + | chr7_1:80113120-80113139 | Msa1042280:CDS | 60.0% | |
| GACGGAGGAGATTGAGGCGG+CGG | + | chr7_1:80109058-80109077 | Msa1042280:CDS | 65.0% | |
| GGCGCATTGCTAGTCGTGCC+AGG | - | chr7_1:80109097-80109116 | None:intergenic | 65.0% | |
| ! | CTGCAGCAGAGGCACGGAAG+AGG | + | chr7_1:80113126-80113145 | Msa1042280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 80108951 | 80113208 | 80108951 | ID=Msa1042280;Name=Msa1042280 |
| chr7_1 | mRNA | 80108951 | 80113208 | 80108951 | ID=Msa1042280-mRNA-1;Parent=Msa1042280;Name=Msa1042280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|6|0|498 |
| chr7_1 | exon | 80108951 | 80109214 | 80108951 | ID=Msa1042280-mRNA-1:exon:21732;Parent=Msa1042280-mRNA-1 |
| chr7_1 | exon | 80110742 | 80110909 | 80110742 | ID=Msa1042280-mRNA-1:exon:21733;Parent=Msa1042280-mRNA-1 |
| chr7_1 | exon | 80110980 | 80111057 | 80110980 | ID=Msa1042280-mRNA-1:exon:21734;Parent=Msa1042280-mRNA-1 |
| chr7_1 | exon | 80111955 | 80112020 | 80111955 | ID=Msa1042280-mRNA-1:exon:21735;Parent=Msa1042280-mRNA-1 |
| chr7_1 | exon | 80112185 | 80112250 | 80112185 | ID=Msa1042280-mRNA-1:exon:21736;Parent=Msa1042280-mRNA-1 |
| chr7_1 | exon | 80112354 | 80113208 | 80112354 | ID=Msa1042280-mRNA-1:exon:21737;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80108951 | 80109214 | 80108951 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80110742 | 80110909 | 80110742 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80110980 | 80111057 | 80110980 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80111955 | 80112020 | 80111955 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80112185 | 80112250 | 80112185 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| chr7_1 | CDS | 80112354 | 80113208 | 80112354 | ID=Msa1042280-mRNA-1:cds;Parent=Msa1042280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
