Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164770 | XP_003625781.1 | 93.173 | 498 | 34 | 0 | 1 | 498 | 1 | 498 | 0.0 | 903 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164770 | G7L602 | 93.173 | 498 | 34 | 0 | 1 | 498 | 1 | 498 | 0.0 | 903 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1164770 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1042280 | Msa1164770 | 0.862250 | 5.790181e-64 | -8.615850e-47 |
| Msa1125230 | Msa1164770 | 0.900655 | 5.897020e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164770 | MtrunA17_Chr7g0266041 | 93.173 | 498 | 34 | 0 | 1 | 498 | 1 | 498 | 0.0 | 903 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164770 | AT1G19490.1 | 36.533 | 375 | 176 | 10 | 136 | 498 | 146 | 470 | 7.90e-49 | 175 |
Find 123 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCATTTCCTAAACTATTTA+AGG | -0.009912 | 7_4:-56539814 | None:intergenic |
| TAAATTCCGTCTCGACTTAT+TGG | 0.171625 | 7_4:-56537919 | None:intergenic |
| GATTATCCTGTTTATCTTCT+AGG | 0.176252 | 7_4:-56539758 | None:intergenic |
| TTCCAGTTAGACAGTTATTT+TGG | 0.182560 | 7_4:+56539505 | Msa1164770:CDS |
| GTGTTTGATTGTCATTTATT+AGG | 0.244671 | 7_4:-56539653 | None:intergenic |
| GACTACTAATAAGCTCTTAA+AGG | 0.251801 | 7_4:+56539262 | Msa1164770:CDS |
| TTATTGGAGTGAGTAGTCTT+AGG | 0.260548 | 7_4:-56537903 | None:intergenic |
| ATAACTGTCTAACTGGAAAA+TGG | 0.302100 | 7_4:-56539500 | None:intergenic |
| AGGCATCTTGCTCCACCTTC+AGG | 0.322906 | 7_4:-56537875 | None:intergenic |
| CCTTAAATAGTTTAGGAAAT+GGG | 0.331794 | 7_4:+56539814 | Msa1164770:CDS |
| GTGAGTAGTCTTAGGGTAAT+AGG | 0.355142 | 7_4:-56537895 | None:intergenic |
| ACTTTATCCTTAAATAGTTT+AGG | 0.356708 | 7_4:+56539807 | Msa1164770:CDS |
| ACTCGGATCCTCCTACGGTT+AGG | 0.369037 | 7_4:+56536220 | Msa1164770:CDS |
| TCCTTAAATAGTTTAGGAAA+TGG | 0.370265 | 7_4:+56539813 | Msa1164770:CDS |
| GCCAAGGTCATTACTAGATC+TGG | 0.382721 | 7_4:-56539895 | None:intergenic |
| GGCCAAAATAACTGTCTAAC+TGG | 0.384261 | 7_4:-56539507 | None:intergenic |
| CTCAATCTCCTCCGTCTTCA+CGG | 0.384356 | 7_4:-56536079 | None:intergenic |
| TGTACATGTTTCCATGTCCT+TGG | 0.401874 | 7_4:+56539685 | Msa1164770:CDS |
| ATAGACAACTCCTGCACAAC+AGG | 0.412712 | 7_4:-56539429 | None:intergenic |
| CTGTGGCCTAGAAGATAAAC+AGG | 0.424839 | 7_4:+56539752 | Msa1164770:CDS |
| CTCGGATCCTCCTACGGTTA+GGG | 0.432230 | 7_4:+56536221 | Msa1164770:CDS |
| TGTTGTCCGTTTCCAATGTC+CGG | 0.444535 | 7_4:-56539720 | None:intergenic |
| GGACCTGCAGTTAATTGTAA+TGG | 0.449863 | 7_4:+56539990 | Msa1164770:CDS |
| ACGGAGAATACGAAGGGTAT+TGG | 0.457238 | 7_4:+56538032 | Msa1164770:CDS |
| GGCGGAGACTCTTGCTTACC+TGG | 0.460047 | 7_4:+56536104 | Msa1164770:CDS |
| CCGTTTCCAATGTCCGGAGG+AGG | 0.461282 | 7_4:-56539714 | None:intergenic |
| GGAATGGCAATGGAATTAAA+TGG | 0.461945 | 7_4:-56539573 | None:intergenic |
| TATTGGAGTGAGTAGTCTTA+GGG | 0.463830 | 7_4:-56537902 | None:intergenic |
| TGGTTGGGTGCAACATATAT+CGG | 0.469292 | 7_4:-56536160 | None:intergenic |
| TAGTTGAATCGCTTATGAAT+AGG | 0.471459 | 7_4:-56536191 | None:intergenic |
| CTCTTCTTCCTCATGTCCGT+CGG | 0.474693 | 7_4:+56536047 | Msa1164770:CDS |
| CTGTTTATCTTCTAGGCCAC+AGG | 0.478302 | 7_4:-56539751 | None:intergenic |
| TGAAAACAGAAGCTTCTGAC+TGG | 0.479343 | 7_4:+56539865 | Msa1164770:CDS |
| GACGGAGGAGATTGAGGCGG+CGG | 0.480909 | 7_4:+56536086 | Msa1164770:CDS |
| TGGAAAATGAAAACCTGAAG+AGG | 0.481984 | 7_4:+56539037 | Msa1164770:CDS |
| CTGCAGCAGAGGCACGGAAG+AGG | 0.484305 | 7_4:+56540165 | Msa1164770:CDS |
| GAATAGGCAGGTGTCTGGTT+GGG | 0.488254 | 7_4:-56536175 | None:intergenic |
| GCTGCTGACTTGCAACAGCT+TGG | 0.490748 | 7_4:-56537782 | None:intergenic |
| GTGGAATGTAATTGAAGCTC+GGG | 0.493264 | 7_4:-56540038 | None:intergenic |
| AGAGGCACGGAAGAGGAGAA+AGG | 0.497229 | 7_4:+56540172 | Msa1164770:CDS |
| CTTAAATAGTTTAGGAAATG+GGG | 0.502738 | 7_4:+56539815 | Msa1164770:CDS |
| GCAAACAATTCGCCGTAGGC+AGG | 0.503421 | 7_4:+56538074 | Msa1164770:CDS |
| CTTATGAATAGGCAGGTGTC+TGG | 0.503520 | 7_4:-56536180 | None:intergenic |
| CACATTATTGAAAAGTTCCA+TGG | 0.505169 | 7_4:+56539969 | Msa1164770:CDS |
| AGAAGAGGAAGATGAAGAAG+TGG | 0.505509 | 7_4:-56536031 | None:intergenic |
| TCAATCTCCTCCGTCTTCAC+GGG | 0.506785 | 7_4:-56536078 | None:intergenic |
| CGATTCAACTATTCCTCACT+CGG | 0.509259 | 7_4:+56536203 | Msa1164770:CDS |
| TCCTTGGTTATACCCTCCTC+CGG | 0.513656 | 7_4:+56539701 | Msa1164770:CDS |
| TACAATTAACTGCAGGTCCA+TGG | 0.516676 | 7_4:-56539986 | None:intergenic |
| CGTGAAGACGGAGGAGATTG+AGG | 0.517627 | 7_4:+56536080 | Msa1164770:CDS |
| GGAGAAAACTCCTGTTGTGC+AGG | 0.518183 | 7_4:+56539419 | Msa1164770:CDS |
| TGAATAGGCAGGTGTCTGGT+TGG | 0.520784 | 7_4:-56536176 | None:intergenic |
| CTGCACCTGGTACTAGTCCA+TGG | 0.524807 | 7_4:+56539466 | Msa1164770:CDS |
| TCCTCACTCGGATCCTCCTA+CGG | 0.528305 | 7_4:+56536215 | Msa1164770:CDS |
| TTATACCCTCCTCCGGACAT+TGG | 0.528583 | 7_4:+56539708 | Msa1164770:CDS |
| TTCTCATATCACAACTTCAC+AGG | 0.532127 | 7_4:+56540088 | Msa1164770:CDS |
| TACATATACATGCGATGGAA+TGG | 0.532964 | 7_4:-56539589 | None:intergenic |
| GCATTCAAAGCAGACAGTCT+AGG | 0.539062 | 7_4:+56540213 | Msa1164770:CDS |
| AGATACCTTGGTGATGGAAG+TGG | 0.543291 | 7_4:-56540057 | None:intergenic |
| TATCGGCGGAATGAGCTGTA+TGG | 0.547816 | 7_4:-56536143 | None:intergenic |
| TTGATTAGATGACGGAAGGA+TGG | 0.549066 | 7_4:-56539532 | None:intergenic |
| GAAGAGGAAGATGAAGAAGT+GGG | 0.550511 | 7_4:-56536030 | None:intergenic |
| CTAATTACCCTAACCGTAGG+AGG | 0.551073 | 7_4:-56536228 | None:intergenic |
| CAGTTGCTGCAGCAGAGGCA+CGG | 0.552500 | 7_4:+56540159 | Msa1164770:CDS |
| CCTCCTCCGGACATTGGAAA+CGG | 0.555478 | 7_4:+56539714 | Msa1164770:CDS |
| ATCTCCTCCGTCTTCACGGG+AGG | 0.562055 | 7_4:-56536075 | None:intergenic |
| TACATGCGATGGAATGGCAA+TGG | 0.562934 | 7_4:-56539583 | None:intergenic |
| CAAGAACAGTTCATATGCCC+AGG | 0.563197 | 7_4:+56540119 | Msa1164770:CDS |
| GGAAGATCCTCCCGTGAAGA+CGG | 0.565935 | 7_4:+56536068 | Msa1164770:CDS |
| AAACAGGATAATCTTCCTCT+AGG | 0.575107 | 7_4:+56539768 | Msa1164770:CDS |
| CGACGGACATGAGGAAGAAG+AGG | 0.579490 | 7_4:-56536046 | None:intergenic |
| GAACTTGATTAGATGACGGA+AGG | 0.579766 | 7_4:-56539536 | None:intergenic |
| ATTAGATGACGGAAGGATGG+AGG | 0.583044 | 7_4:-56539529 | None:intergenic |
| AAAAGCTGCCACCTTAGCGA+TGG | 0.585116 | 7_4:+56539017 | Msa1164770:CDS |
| AACTTGGAGTAGCATGGCCA+AGG | 0.586320 | 7_4:-56539911 | None:intergenic |
| AAGCTAATTACCCTAACCGT+AGG | 0.587473 | 7_4:-56536231 | None:intergenic |
| TGAATCGCTTATGAATAGGC+AGG | 0.589062 | 7_4:-56536187 | None:intergenic |
| TCCAGATCTAGTAATGACCT+TGG | 0.589350 | 7_4:+56539894 | Msa1164770:CDS |
| CATGGTACATATACATGCGA+TGG | 0.590622 | 7_4:-56539594 | None:intergenic |
| GGATGCAGTTGCTGCAGCAG+AGG | 0.591803 | 7_4:+56540154 | Msa1164770:CDS |
| AGGATCTTCCGACGGACATG+AGG | 0.592339 | 7_4:-56536055 | None:intergenic |
| CGTTTCCAATGTCCGGAGGA+GGG | 0.595745 | 7_4:-56539713 | None:intergenic |
| TCTTCTAGGCCACAGGAAGG+TGG | 0.595897 | 7_4:-56539744 | None:intergenic |
| AGTGGAATGTAATTGAAGCT+CGG | 0.597326 | 7_4:-56540039 | None:intergenic |
| CCAATGTAAATACCTGCCTA+CGG | 0.598134 | 7_4:-56538086 | None:intergenic |
| TTTGTGAAGAGACTCAGACT+TGG | 0.604349 | 7_4:-56539622 | None:intergenic |
| TGGTGAAAAGAAGAAGGAGT+CGG | 0.606933 | 7_4:+56539214 | Msa1164770:intron |
| TCAAAGCAGACAGTCTAGGA+TGG | 0.606968 | 7_4:+56540217 | Msa1164770:CDS |
| TAACCATTACAATTAACTGC+AGG | 0.608538 | 7_4:-56539993 | None:intergenic |
| CTCACTCCAATAAGTCGAGA+CGG | 0.611439 | 7_4:+56537913 | Msa1164770:CDS |
| GGAAAATGAAAACCTGAAGA+GGG | 0.611968 | 7_4:+56539038 | Msa1164770:CDS |
| AAATGGTTATAAAGAAACCA+TGG | 0.613612 | 7_4:-56539483 | None:intergenic |
| AGAAGCTGTTGAAGATACCT+TGG | 0.614930 | 7_4:-56540069 | None:intergenic |
| TGGCAAATAGAGAGTCAGCT+AGG | 0.616179 | 7_4:+56538052 | Msa1164770:CDS |
| GGAGGGTATAACCAAGGACA+TGG | 0.617444 | 7_4:-56539696 | None:intergenic |
| TTAGATGACGGAAGGATGGA+GGG | 0.620077 | 7_4:-56539528 | None:intergenic |
| GAAAACAGAAGCTTCTGACT+GGG | 0.620422 | 7_4:+56539866 | Msa1164770:CDS |
| AATTGAACTTGATTAGATGA+CGG | 0.624936 | 7_4:-56539540 | None:intergenic |
| GGACATGGAAACATGTACAA+TGG | 0.627326 | 7_4:-56539681 | None:intergenic |
| AGAAACCATGGACTAGTACC+AGG | 0.628134 | 7_4:-56539471 | None:intergenic |
| CATGGACTAGTACCAGGTGC+AGG | 0.629095 | 7_4:-56539465 | None:intergenic |
| TCCGAGGTATCACCTGCACC+TGG | 0.634195 | 7_4:+56539453 | Msa1164770:CDS |
| GACTCAGACTTGGAAGAACA+TGG | 0.635215 | 7_4:-56539612 | None:intergenic |
| ACCAGGTGCAGGTGATACCT+CGG | 0.636913 | 7_4:-56539454 | None:intergenic |
| GCAGGAGTTGTCTATGTCCG+AGG | 0.642391 | 7_4:+56539437 | Msa1164770:CDS |
| AGAAGCACGGAGAATACGAA+GGG | 0.646379 | 7_4:+56538026 | Msa1164770:CDS |
| TAAGTCAATACACACTGTAG+TGG | 0.646969 | 7_4:+56539398 | Msa1164770:CDS |
| GGACAACAGCCACCTTCCTG+TGG | 0.647070 | 7_4:+56539735 | Msa1164770:CDS |
| AATGCTTCAGGCTCTGAGTG+AGG | 0.647299 | 7_4:+56538984 | Msa1164770:intron |
| TGTTGAAGATACCTTGGTGA+TGG | 0.647819 | 7_4:-56540063 | None:intergenic |
| CTAGGCAAACAATTCGCCGT+AGG | 0.651761 | 7_4:+56538070 | Msa1164770:CDS |
| AAGAAGCACGGAGAATACGA+AGG | 0.656333 | 7_4:+56538025 | Msa1164770:CDS |
| TGTCCGTTTCCAATGTCCGG+AGG | 0.658708 | 7_4:-56539717 | None:intergenic |
| ACCGTAGGAGGATCCGAGTG+AGG | 0.660775 | 7_4:-56536216 | None:intergenic |
| AGATCCTCCCGTGAAGACGG+AGG | 0.667295 | 7_4:+56536071 | Msa1164770:CDS |
| TTCACGGGAGGATCTTCCGA+CGG | 0.678112 | 7_4:-56536063 | None:intergenic |
| ACATTCCACTTCCATCACCA+AGG | 0.678562 | 7_4:+56540052 | Msa1164770:CDS |
| TCCGGAGGAGGGTATAACCA+AGG | 0.679455 | 7_4:-56539702 | None:intergenic |
| GTACTACATTGTTCACCTAG+AGG | 0.688797 | 7_4:-56539783 | None:intergenic |
| TTATCTTCTAGGCCACAGGA+AGG | 0.689767 | 7_4:-56539747 | None:intergenic |
| GAAGACGGAGGAGATTGAGG+CGG | 0.693834 | 7_4:+56536083 | Msa1164770:CDS |
| TTGGGTGCAACATATATCGG+CGG | 0.707534 | 7_4:-56536157 | None:intergenic |
| GTCGAGACGGAATTTAACCG+AGG | 0.731809 | 7_4:+56537926 | Msa1164770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCAAAATCATTTTTTTAA+TGG | - | chr7_4:56536461-56536480 | None:intergenic | 10.0% |
| !! | AAATTTGACAATAATTTAAA+AGG | + | chr7_4:56536482-56536501 | Msa1164770:intron | 10.0% |
| !!! | TTTTGAAATGATTTAATTTA+TGG | + | chr7_4:56537754-56537773 | Msa1164770:intron | 10.0% |
| !! | AATAATTTAAAAGGTTAACA+TGG | + | chr7_4:56536491-56536510 | Msa1164770:intron | 15.0% |
| !!! | TATAATTAACCATGATTTTT+AGG | + | chr7_4:56536594-56536613 | Msa1164770:intron | 15.0% |
| !! | TATAATAATTGAACACAATT+TGG | + | chr7_4:56536693-56536712 | Msa1164770:intron | 15.0% |
| !!! | TTTTTTTTTTTGACAAAAGT+TGG | + | chr7_4:56536739-56536758 | Msa1164770:intron | 15.0% |
| !!! | ATTTCATTTTATCCTTATTT+GGG | + | chr7_4:56537137-56537156 | Msa1164770:intron | 15.0% |
| !!! | TTTGTTTATTGAATTGATTT+TGG | + | chr7_4:56537515-56537534 | Msa1164770:intron | 15.0% |
| !!! | ATGAATTTTGTTATAATAGT+TGG | + | chr7_4:56538363-56538382 | Msa1164770:intron | 15.0% |
| !!! | CTGAATTTTTTAAAGTATAA+GGG | - | chr7_4:56538836-56538855 | None:intergenic | 15.0% |
| !!! | CTTATACTTTAAAAAATTCA+GGG | + | chr7_4:56538835-56538854 | Msa1164770:intron | 15.0% |
| !! | AAATTATAGGGATTAATAAA+AGG | - | chr7_4:56538890-56538909 | None:intergenic | 15.0% |
| !! | AATAGTATAATCATGTCTTA+CGG | - | chr7_4:56536315-56536334 | None:intergenic | 20.0% |
| !! | ATTAAAATATATGCAGACTA+TGG | - | chr7_4:56536386-56536405 | None:intergenic | 20.0% |
| !! | TTAATTCACTTCTTTATCAT+CGG | - | chr7_4:56536416-56536435 | None:intergenic | 20.0% |
| !! | TCATGGTTAATTATATTAAG+TGG | - | chr7_4:56536589-56536608 | None:intergenic | 20.0% |
| !! | AAATATACACCTAAAAATCA+TGG | - | chr7_4:56536606-56536625 | None:intergenic | 20.0% |
| !! | TTAGTAGCATCATTTATATT+TGG | + | chr7_4:56536768-56536787 | Msa1164770:intron | 20.0% |
| !!! | GAAATTTTATTTTCAACAGA+TGG | + | chr7_4:56536894-56536913 | Msa1164770:intron | 20.0% |
| !!! | CATTTCATTTTATCCTTATT+TGG | + | chr7_4:56537136-56537155 | Msa1164770:intron | 20.0% |
| !!! | TTTCATTTTATCCTTATTTG+GGG | + | chr7_4:56537138-56537157 | Msa1164770:intron | 20.0% |
| !!! | ATTGTATACACATGAATTTT+TGG | + | chr7_4:56537222-56537241 | Msa1164770:intron | 20.0% |
| !!! | TTGTATACACATGAATTTTT+GGG | + | chr7_4:56537223-56537242 | Msa1164770:intron | 20.0% |
| !! | AAAACATGTCTAATATTTGT+TGG | + | chr7_4:56537315-56537334 | Msa1164770:intron | 20.0% |
| !!! | TCTTGTTATTTTGTTACTTA+TGG | + | chr7_4:56537601-56537620 | Msa1164770:intron | 20.0% |
| !!! | AACTTAATTATTTGTTTTCC+TGG | + | chr7_4:56537645-56537664 | Msa1164770:intron | 20.0% |
| !!! | AAATGATTTAATTTATGGCA+GGG | + | chr7_4:56537759-56537778 | Msa1164770:intron | 20.0% |
| !!! | TTTCTTTTACTTCAATTTCT+AGG | + | chr7_4:56537964-56537983 | Msa1164770:intron | 20.0% |
| !!! | TTCTTTTACTTCAATTTCTA+GGG | + | chr7_4:56537965-56537984 | Msa1164770:intron | 20.0% |
| !!! | AAGAATATGTGTTTTTAAAC+TGG | - | chr7_4:56538712-56538731 | None:intergenic | 20.0% |
| !! | TTAAAAACACATATTCTTAC+AGG | + | chr7_4:56538714-56538733 | Msa1164770:intron | 20.0% |
| !!! | CCTGAATTTTTTAAAGTATA+AGG | - | chr7_4:56538837-56538856 | None:intergenic | 20.0% |
| !!! | CCTTATACTTTAAAAAATTC+AGG | + | chr7_4:56538834-56538853 | Msa1164770:intron | 20.0% |
| !!! | TTTTTCATTGAAATATTGAG+TGG | + | chr7_4:56538942-56538961 | Msa1164770:intron | 20.0% |
| !! | TTGCAAAAGTAAATATATAC+TGG | + | chr7_4:56539343-56539362 | Msa1164770:intron | 20.0% |
| !! | ACTTTATCCTTAAATAGTTT+AGG | + | chr7_4:56539807-56539826 | Msa1164770:CDS | 20.0% |
| ! | GTTAACATGGTTTAATTATG+TGG | + | chr7_4:56536504-56536523 | Msa1164770:intron | 25.0% |
| ! | AACAAATTGTCATGACTTAT+TGG | + | chr7_4:56536559-56536578 | Msa1164770:intron | 25.0% |
| ! | GGTTAATTATATTAAGTGGA+TGG | - | chr7_4:56536585-56536604 | None:intergenic | 25.0% |
| !!! | GATTTTTAGGTGTATATTTG+AGG | + | chr7_4:56536607-56536626 | Msa1164770:intron | 25.0% |
| ! | GAATATAAGTTGTTAAACAC+AGG | - | chr7_4:56536824-56536843 | None:intergenic | 25.0% |
| !! | TGTTACTTGGTTTATAGAAA+AGG | - | chr7_4:56536933-56536952 | None:intergenic | 25.0% |
| ! | GATATCGTAACTTAGTTTAT+AGG | - | chr7_4:56536967-56536986 | None:intergenic | 25.0% |
| !! | ACTATTAATTTTTCCGCTTT+AGG | + | chr7_4:56537056-56537075 | Msa1164770:intron | 25.0% |
| ! | TTAGGATGTATTCACTTTAA+AGG | + | chr7_4:56537074-56537093 | Msa1164770:intron | 25.0% |
| !!! | GTTATTTTCTTCATTCCTTA+TGG | + | chr7_4:56537578-56537597 | Msa1164770:intron | 25.0% |
| ! | AACAAAATAACAAGACCATA+AGG | - | chr7_4:56537596-56537615 | None:intergenic | 25.0% |
| !! | TTTTCCTGGTATAGTAAAAA+TGG | + | chr7_4:56537659-56537678 | Msa1164770:intron | 25.0% |
| !!! | TTATCCATTTTTACTATACC+AGG | - | chr7_4:56537666-56537685 | None:intergenic | 25.0% |
| ! | CATCCAATTCCAATAATTAA+AGG | + | chr7_4:56537698-56537717 | Msa1164770:intron | 25.0% |
| ! | ACTCCTTTAATTATTGGAAT+TGG | - | chr7_4:56537704-56537723 | None:intergenic | 25.0% |
| ! | GGTAATACTCCTTTAATTAT+TGG | - | chr7_4:56537710-56537729 | None:intergenic | 25.0% |
| !!! | TACCAAGTTGAAACATTTTA+TGG | + | chr7_4:56537726-56537745 | Msa1164770:intron | 25.0% |
| !! | GAAATGATTTAATTTATGGC+AGG | + | chr7_4:56537758-56537777 | Msa1164770:intron | 25.0% |
| ! | AATTACATTCTCTTATACCT+CGG | - | chr7_4:56537946-56537965 | None:intergenic | 25.0% |
| ! | TCATAAGCAAATCTATACAA+CGG | - | chr7_4:56538124-56538143 | None:intergenic | 25.0% |
| !!! | GTGTGTTTAGTTTAGATTTT+GGG | - | chr7_4:56538150-56538169 | None:intergenic | 25.0% |
| !!! | TGTGTGTTTAGTTTAGATTT+TGG | - | chr7_4:56538151-56538170 | None:intergenic | 25.0% |
| ! | AATCTAAACTAAACACACAT+TGG | + | chr7_4:56538152-56538171 | Msa1164770:intron | 25.0% |
| ! | ATAGCATATAAAAACACATG+TGG | - | chr7_4:56538218-56538237 | None:intergenic | 25.0% |
| ! | CTCTTCATATTAGTCAAAAT+AGG | - | chr7_4:56538328-56538347 | None:intergenic | 25.0% |
| ! | TTATAACAAAATTCATGTGC+TGG | - | chr7_4:56538359-56538378 | None:intergenic | 25.0% |
| !!! | TAAGCTTTGAAAAATAAGAG+AGG | - | chr7_4:56538531-56538550 | None:intergenic | 25.0% |
| !!! | GTGTAGATTTTAGAATCTTT+TGG | - | chr7_4:56538741-56538760 | None:intergenic | 25.0% |
| !! | TCTTTTGTATAAAATGCTTC+AGG | + | chr7_4:56538972-56538991 | Msa1164770:intron | 25.0% |
| ! | AGATGAAATTAATTGAGAAG+CGG | - | chr7_4:56539150-56539169 | None:intergenic | 25.0% |
| ! | AAATGGTTATAAAGAAACCA+TGG | - | chr7_4:56539486-56539505 | None:intergenic | 25.0% |
| ! | AATTGAACTTGATTAGATGA+CGG | - | chr7_4:56539543-56539562 | None:intergenic | 25.0% |
| !! | GTGTTTGATTGTCATTTATT+AGG | - | chr7_4:56539656-56539675 | None:intergenic | 25.0% |
| ! | TCCTTAAATAGTTTAGGAAA+TGG | + | chr7_4:56539813-56539832 | Msa1164770:CDS | 25.0% |
| ! | CCTTAAATAGTTTAGGAAAT+GGG | + | chr7_4:56539814-56539833 | Msa1164770:CDS | 25.0% |
| ! | CTTAAATAGTTTAGGAAATG+GGG | + | chr7_4:56539815-56539834 | Msa1164770:CDS | 25.0% |
| !! | TTTTCAATAATGTGACATCT+TGG | - | chr7_4:56539963-56539982 | None:intergenic | 25.0% |
| TAGTTGAATCGCTTATGAAT+AGG | - | chr7_4:56536194-56536213 | None:intergenic | 30.0% | |
| ! | GGATAATCTTTTAGTGCATA+TGG | + | chr7_4:56536525-56536544 | Msa1164770:intron | 30.0% |
| ACACAATTTGGATGTTTAGT+TGG | + | chr7_4:56536705-56536724 | Msa1164770:intron | 30.0% | |
| AAAGTGAATACATCCTAAAG+CGG | - | chr7_4:56537072-56537091 | None:intergenic | 30.0% | |
| !! | AGCTTGTTGTATTCATACAT+TGG | - | chr7_4:56537294-56537313 | None:intergenic | 30.0% |
| !! | CACAAAGTGTTGTTAAATAG+AGG | + | chr7_4:56537419-56537438 | Msa1164770:intron | 30.0% |
| !!! | TGAATTGATTTTGGTTTTGC+TGG | + | chr7_4:56537524-56537543 | Msa1164770:intron | 30.0% |
| TGAAGAAAATAACTCAGACA+CGG | - | chr7_4:56537571-56537590 | None:intergenic | 30.0% | |
| CTCCATAAAATGTTTCAACT+TGG | - | chr7_4:56537731-56537750 | None:intergenic | 30.0% | |
| !! | CAAGTTGAAACATTTTATGG+AGG | + | chr7_4:56537729-56537748 | Msa1164770:intron | 30.0% |
| !!! | CTGAATCCTTTCTGTTTTTA+CGG | - | chr7_4:56537835-56537854 | None:intergenic | 30.0% |
| AATTTACTGAGTTTCTGTTC+AGG | + | chr7_4:56537996-56538015 | Msa1164770:intron | 30.0% | |
| TTACTTCTTAGTCAAATGTG+TGG | + | chr7_4:56538237-56538256 | Msa1164770:intron | 30.0% | |
| TACAAATTTACTTGTTCAGC+AGG | - | chr7_4:56538809-56538828 | None:intergenic | 30.0% | |
| AGAGATCGGTGTAAATTATA+GGG | - | chr7_4:56538902-56538921 | None:intergenic | 30.0% | |
| GACTACTAATAAGCTCTTAA+AGG | + | chr7_4:56539262-56539281 | Msa1164770:CDS | 30.0% | |
| ATGCAAGAAATCTTTGAGTA+TGG | + | chr7_4:56539305-56539324 | Msa1164770:intron | 30.0% | |
| TGCAAGAAATCTTTGAGTAT+GGG | + | chr7_4:56539306-56539325 | Msa1164770:intron | 30.0% | |
| ATAACTGTCTAACTGGAAAA+TGG | - | chr7_4:56539503-56539522 | None:intergenic | 30.0% | |
| ! | TTCCAGTTAGACAGTTATTT+TGG | + | chr7_4:56539505-56539524 | Msa1164770:CDS | 30.0% |
| GATTATCCTGTTTATCTTCT+AGG | - | chr7_4:56539761-56539780 | None:intergenic | 30.0% | |
| CCCATTTCCTAAACTATTTA+AGG | - | chr7_4:56539817-56539836 | None:intergenic | 30.0% | |
| CACATTATTGAAAAGTTCCA+TGG | + | chr7_4:56539969-56539988 | Msa1164770:CDS | 30.0% | |
| TAACCATTACAATTAACTGC+AGG | - | chr7_4:56539996-56540015 | None:intergenic | 30.0% | |
| CAAATAGCAGCTATAGTTAG+CGG | + | chr7_4:56537347-56537366 | Msa1164770:intron | 35.0% | |
| !! | TGTTTTTACGGATGTAGAAC+TGG | - | chr7_4:56537823-56537842 | None:intergenic | 35.0% |
| CTACATCCGTAAAAACAGAA+AGG | + | chr7_4:56537826-56537845 | Msa1164770:CDS | 35.0% | |
| TGACTGCTTAAAAAACCTGA+AGG | + | chr7_4:56537860-56537879 | Msa1164770:CDS | 35.0% | |
| ! | TATTGGAGTGAGTAGTCTTA+GGG | - | chr7_4:56537905-56537924 | None:intergenic | 35.0% |
| TTATTGGAGTGAGTAGTCTT+AGG | - | chr7_4:56537906-56537925 | None:intergenic | 35.0% | |
| TAAATTCCGTCTCGACTTAT+TGG | - | chr7_4:56537922-56537941 | None:intergenic | 35.0% | |
| TTCAGGAAGAAAAAGAAGCA+CGG | + | chr7_4:56538013-56538032 | Msa1164770:intron | 35.0% | |
| TGCCTAACCACATTAACTTT+GGG | - | chr7_4:56538269-56538288 | None:intergenic | 35.0% | |
| ATGCCTAACCACATTAACTT+TGG | - | chr7_4:56538270-56538289 | None:intergenic | 35.0% | |
| ! | GCTGTCAATCTCTACATTTT+GGG | - | chr7_4:56538404-56538423 | None:intergenic | 35.0% |
| ! | TGCTGTCAATCTCTACATTT+TGG | - | chr7_4:56538405-56538424 | None:intergenic | 35.0% |
| ATGGTAACAGACTAACAGTA+AGG | - | chr7_4:56538437-56538456 | None:intergenic | 35.0% | |
| TTACAAGCATTACTGCATGT+GGG | - | chr7_4:56538468-56538487 | None:intergenic | 35.0% | |
| CATTGCAGTCATTGCAAAAT+GGG | - | chr7_4:56538502-56538521 | None:intergenic | 35.0% | |
| ACATTGCAGTCATTGCAAAA+TGG | - | chr7_4:56538503-56538522 | None:intergenic | 35.0% | |
| TTTGCAATGACTGCAATGTT+TGG | + | chr7_4:56538504-56538523 | Msa1164770:intron | 35.0% | |
| ACTTGTTCAGCAGGTAATTT+GGG | - | chr7_4:56538800-56538819 | None:intergenic | 35.0% | |
| TACTTGTTCAGCAGGTAATT+TGG | - | chr7_4:56538801-56538820 | None:intergenic | 35.0% | |
| GAGAGATCGGTGTAAATTAT+AGG | - | chr7_4:56538903-56538922 | None:intergenic | 35.0% | |
| ! | GTTTTCATTTTCCATCGCTA+AGG | - | chr7_4:56539031-56539050 | None:intergenic | 35.0% |
| TGGAAAATGAAAACCTGAAG+AGG | + | chr7_4:56539037-56539056 | Msa1164770:CDS | 35.0% | |
| GGAAAATGAAAACCTGAAGA+GGG | + | chr7_4:56539038-56539057 | Msa1164770:CDS | 35.0% | |
| ! | AAAGAGGAAGGGAGTATAAT+TGG | - | chr7_4:56539081-56539100 | None:intergenic | 35.0% |
| TTAAGCCCAACAGAATAAAG+AGG | - | chr7_4:56539097-56539116 | None:intergenic | 35.0% | |
| !! | CATTTCTGGTGAAAAGAAGA+AGG | + | chr7_4:56539208-56539227 | Msa1164770:intron | 35.0% |
| TAAGTCAATACACACTGTAG+TGG | + | chr7_4:56539398-56539417 | Msa1164770:CDS | 35.0% | |
| GGAATGGCAATGGAATTAAA+TGG | - | chr7_4:56539576-56539595 | None:intergenic | 35.0% | |
| TACATATACATGCGATGGAA+TGG | - | chr7_4:56539592-56539611 | None:intergenic | 35.0% | |
| AAACAGGATAATCTTCCTCT+AGG | + | chr7_4:56539768-56539787 | Msa1164770:CDS | 35.0% | |
| ! | GCTTCTGTTTTCAGTTTGAT+GGG | - | chr7_4:56539858-56539877 | None:intergenic | 35.0% |
| ! | AGCTTCTGTTTTCAGTTTGA+TGG | - | chr7_4:56539859-56539878 | None:intergenic | 35.0% |
| AAGAAAAACTTGGAGTAGCA+TGG | - | chr7_4:56539920-56539939 | None:intergenic | 35.0% | |
| ! | ACTCCAAGTTTTTCTTCAGA+TGG | + | chr7_4:56539924-56539943 | Msa1164770:CDS | 35.0% |
| AGTGGAATGTAATTGAAGCT+CGG | - | chr7_4:56540042-56540061 | None:intergenic | 35.0% | |
| TTCTCATATCACAACTTCAC+AGG | + | chr7_4:56540088-56540107 | Msa1164770:CDS | 35.0% | |
| GAAGAGGAAGATGAAGAAGT+GGG | - | chr7_4:56536033-56536052 | None:intergenic | 40.0% | |
| AGAAGAGGAAGATGAAGAAG+TGG | - | chr7_4:56536034-56536053 | None:intergenic | 40.0% | |
| TGGTTGGGTGCAACATATAT+CGG | - | chr7_4:56536163-56536182 | None:intergenic | 40.0% | |
| TGAATCGCTTATGAATAGGC+AGG | - | chr7_4:56536190-56536209 | None:intergenic | 40.0% | |
| CGATTCAACTATTCCTCACT+CGG | + | chr7_4:56536203-56536222 | Msa1164770:CDS | 40.0% | |
| AAGCTAATTACCCTAACCGT+AGG | - | chr7_4:56536234-56536253 | None:intergenic | 40.0% | |
| ACCACACGAGTCAACTATAA+CGG | + | chr7_4:56536359-56536378 | Msa1164770:intron | 40.0% | |
| ! | GGAAAAGTTGACGTGTTACT+TGG | - | chr7_4:56536946-56536965 | None:intergenic | 40.0% |
| CTCTATTCTGTCCCCAAATA+AGG | - | chr7_4:56537152-56537171 | None:intergenic | 40.0% | |
| GTGTTGTCAATCGCATATTG+TGG | - | chr7_4:56537490-56537509 | None:intergenic | 40.0% | |
| TTGCTGGTACTCCTTGTTAA+TGG | + | chr7_4:56537540-56537559 | Msa1164770:intron | 40.0% | |
| ACACGGATGTTCCATTAACA+AGG | - | chr7_4:56537554-56537573 | None:intergenic | 40.0% | |
| CTGCTTAAAAAACCTGAAGG+TGG | + | chr7_4:56537863-56537882 | Msa1164770:CDS | 40.0% | |
| ! | GTGAGTAGTCTTAGGGTAAT+AGG | - | chr7_4:56537898-56537917 | None:intergenic | 40.0% |
| CCAATGTAAATACCTGCCTA+CGG | - | chr7_4:56538089-56538108 | None:intergenic | 40.0% | |
| GTTGTGACCCAAAGTTAATG+TGG | + | chr7_4:56538259-56538278 | Msa1164770:intron | 40.0% | |
| GACCCAAAGTTAATGTGGTT+AGG | + | chr7_4:56538264-56538283 | Msa1164770:intron | 40.0% | |
| !!! | AATCTCTACATTTTGGGACC+TGG | - | chr7_4:56538398-56538417 | None:intergenic | 40.0% |
| GTTACAAGCATTACTGCATG+TGG | - | chr7_4:56538469-56538488 | None:intergenic | 40.0% | |
| GGGCTTGTATACAAGAAAAG+TGG | + | chr7_4:56538855-56538874 | Msa1164770:intron | 40.0% | |
| ! | TTCATTTTCCATCGCTAAGG+TGG | - | chr7_4:56539028-56539047 | None:intergenic | 40.0% |
| ! | AGAAAAAGCATACCCTCTTC+AGG | - | chr7_4:56539053-56539072 | None:intergenic | 40.0% |
| TCCCTTCCTCTTTATTCTGT+TGG | + | chr7_4:56539088-56539107 | Msa1164770:intron | 40.0% | |
| CCCAACAGAATAAAGAGGAA+GGG | - | chr7_4:56539092-56539111 | None:intergenic | 40.0% | |
| CCCTTCCTCTTTATTCTGTT+GGG | + | chr7_4:56539089-56539108 | Msa1164770:intron | 40.0% | |
| !!! | TTTTCCGCATGTGTCATTTC+TGG | + | chr7_4:56539194-56539213 | Msa1164770:intron | 40.0% |
| TTCACCAGAAATGACACATG+CGG | - | chr7_4:56539201-56539220 | None:intergenic | 40.0% | |
| TGGTGAAAAGAAGAAGGAGT+CGG | + | chr7_4:56539214-56539233 | Msa1164770:intron | 40.0% | |
| GGCCAAAATAACTGTCTAAC+TGG | - | chr7_4:56539510-56539529 | None:intergenic | 40.0% | |
| !! | TTGATTAGATGACGGAAGGA+TGG | - | chr7_4:56539535-56539554 | None:intergenic | 40.0% |
| !! | GAACTTGATTAGATGACGGA+AGG | - | chr7_4:56539539-56539558 | None:intergenic | 40.0% |
| CATGGTACATATACATGCGA+TGG | - | chr7_4:56539597-56539616 | None:intergenic | 40.0% | |
| TTTGTGAAGAGACTCAGACT+TGG | - | chr7_4:56539625-56539644 | None:intergenic | 40.0% | |
| GGACATGGAAACATGTACAA+TGG | - | chr7_4:56539684-56539703 | None:intergenic | 40.0% | |
| TGTACATGTTTCCATGTCCT+TGG | + | chr7_4:56539685-56539704 | Msa1164770:CDS | 40.0% | |
| GTACTACATTGTTCACCTAG+AGG | - | chr7_4:56539786-56539805 | None:intergenic | 40.0% | |
| TGAAAACAGAAGCTTCTGAC+TGG | + | chr7_4:56539865-56539884 | Msa1164770:CDS | 40.0% | |
| GAAAACAGAAGCTTCTGACT+GGG | + | chr7_4:56539866-56539885 | Msa1164770:CDS | 40.0% | |
| TCCAGATCTAGTAATGACCT+TGG | + | chr7_4:56539894-56539913 | Msa1164770:CDS | 40.0% | |
| CCTCCATCTGAAGAAAAACT+TGG | - | chr7_4:56539930-56539949 | None:intergenic | 40.0% | |
| ! | CCAAGTTTTTCTTCAGATGG+AGG | + | chr7_4:56539927-56539946 | Msa1164770:CDS | 40.0% |
| TACAATTAACTGCAGGTCCA+TGG | - | chr7_4:56539989-56540008 | None:intergenic | 40.0% | |
| GGACCTGCAGTTAATTGTAA+TGG | + | chr7_4:56539990-56540009 | Msa1164770:CDS | 40.0% | |
| GTGGAATGTAATTGAAGCTC+GGG | - | chr7_4:56540041-56540060 | None:intergenic | 40.0% | |
| TGTTGAAGATACCTTGGTGA+TGG | - | chr7_4:56540066-56540085 | None:intergenic | 40.0% | |
| AGAAGCTGTTGAAGATACCT+TGG | - | chr7_4:56540072-56540091 | None:intergenic | 40.0% | |
| ! | CATCCACTAGATTTTTGCCT+GGG | - | chr7_4:56540139-56540158 | None:intergenic | 40.0% |
| TTGGGTGCAACATATATCGG+CGG | - | chr7_4:56536160-56536179 | None:intergenic | 45.0% | |
| CTTATGAATAGGCAGGTGTC+TGG | - | chr7_4:56536183-56536202 | None:intergenic | 45.0% | |
| CTAATTACCCTAACCGTAGG+AGG | - | chr7_4:56536231-56536250 | None:intergenic | 45.0% | |
| !! | TCCGTTATAGTTGACTCGTG+TGG | - | chr7_4:56536363-56536382 | None:intergenic | 45.0% |
| ! | ATAGAGAGCACACAGAACGT+CGG | - | chr7_4:56537183-56537202 | None:intergenic | 45.0% |
| CTCACTCCAATAAGTCGAGA+CGG | + | chr7_4:56537913-56537932 | Msa1164770:CDS | 45.0% | |
| ! | AAGAAGCACGGAGAATACGA+AGG | + | chr7_4:56538025-56538044 | Msa1164770:CDS | 45.0% |
| ! | AGAAGCACGGAGAATACGAA+GGG | + | chr7_4:56538026-56538045 | Msa1164770:CDS | 45.0% |
| ! | ACGGAGAATACGAAGGGTAT+TGG | + | chr7_4:56538032-56538051 | Msa1164770:CDS | 45.0% |
| TGGCAAATAGAGAGTCAGCT+AGG | + | chr7_4:56538052-56538071 | Msa1164770:CDS | 45.0% | |
| CCGTAGGCAGGTATTTACAT+TGG | + | chr7_4:56538086-56538105 | Msa1164770:intron | 45.0% | |
| AACACACATTGGCACATGCT+TGG | + | chr7_4:56538163-56538182 | Msa1164770:intron | 45.0% | |
| AATAGTTGGATGTGTCCTCC+AGG | + | chr7_4:56538377-56538396 | Msa1164770:intron | 45.0% | |
| CTGCATGTGGGTCAAAAACA+TGG | - | chr7_4:56538456-56538475 | None:intergenic | 45.0% | |
| GCCCAACAGAATAAAGAGGA+AGG | - | chr7_4:56539093-56539112 | None:intergenic | 45.0% | |
| ATAGACAACTCCTGCACAAC+AGG | - | chr7_4:56539432-56539451 | None:intergenic | 45.0% | |
| !! | AGAAACCATGGACTAGTACC+AGG | - | chr7_4:56539474-56539493 | None:intergenic | 45.0% |
| !! | TTAGATGACGGAAGGATGGA+GGG | - | chr7_4:56539531-56539550 | None:intergenic | 45.0% |
| !! | ATTAGATGACGGAAGGATGG+AGG | - | chr7_4:56539532-56539551 | None:intergenic | 45.0% |
| TACATGCGATGGAATGGCAA+TGG | - | chr7_4:56539586-56539605 | None:intergenic | 45.0% | |
| GACTCAGACTTGGAAGAACA+TGG | - | chr7_4:56539615-56539634 | None:intergenic | 45.0% | |
| TGTTGTCCGTTTCCAATGTC+CGG | - | chr7_4:56539723-56539742 | None:intergenic | 45.0% | |
| TTATCTTCTAGGCCACAGGA+AGG | - | chr7_4:56539750-56539769 | None:intergenic | 45.0% | |
| CTGTTTATCTTCTAGGCCAC+AGG | - | chr7_4:56539754-56539773 | None:intergenic | 45.0% | |
| CTGTGGCCTAGAAGATAAAC+AGG | + | chr7_4:56539752-56539771 | Msa1164770:CDS | 45.0% | |
| GCCAAGGTCATTACTAGATC+TGG | - | chr7_4:56539898-56539917 | None:intergenic | 45.0% | |
| ACATTCCACTTCCATCACCA+AGG | + | chr7_4:56540052-56540071 | Msa1164770:CDS | 45.0% | |
| !! | AGATACCTTGGTGATGGAAG+TGG | - | chr7_4:56540060-56540079 | None:intergenic | 45.0% |
| CAAGAACAGTTCATATGCCC+AGG | + | chr7_4:56540119-56540138 | Msa1164770:CDS | 45.0% | |
| ATGCCCAGGCAAAAATCTAG+TGG | + | chr7_4:56540133-56540152 | Msa1164770:CDS | 45.0% | |
| ! | GCATCCACTAGATTTTTGCC+TGG | - | chr7_4:56540140-56540159 | None:intergenic | 45.0% |
| GCATTCAAAGCAGACAGTCT+AGG | + | chr7_4:56540213-56540232 | Msa1164770:CDS | 45.0% | |
| TCAAAGCAGACAGTCTAGGA+TGG | + | chr7_4:56540217-56540236 | Msa1164770:CDS | 45.0% | |
| !! | TTAAAATTGAATTATAATTA+AGG | - | chr7_4:56536278-56536297 | None:intergenic | 5.0% |
| !!! | TAATTATAATTCAATTTTAA+CGG | + | chr7_4:56536278-56536297 | Msa1164770:intron | 5.0% |
| CTCTTCTTCCTCATGTCCGT+CGG | + | chr7_4:56536047-56536066 | Msa1164770:CDS | 50.0% | |
| TCAATCTCCTCCGTCTTCAC+GGG | - | chr7_4:56536081-56536100 | None:intergenic | 50.0% | |
| CTCAATCTCCTCCGTCTTCA+CGG | - | chr7_4:56536082-56536101 | None:intergenic | 50.0% | |
| TATCGGCGGAATGAGCTGTA+TGG | - | chr7_4:56536146-56536165 | None:intergenic | 50.0% | |
| GAATAGGCAGGTGTCTGGTT+GGG | - | chr7_4:56536178-56536197 | None:intergenic | 50.0% | |
| TGAATAGGCAGGTGTCTGGT+TGG | - | chr7_4:56536179-56536198 | None:intergenic | 50.0% | |
| GTCGAGACGGAATTTAACCG+AGG | + | chr7_4:56537926-56537945 | Msa1164770:CDS | 50.0% | |
| CTAGGCAAACAATTCGCCGT+AGG | + | chr7_4:56538070-56538089 | Msa1164770:CDS | 50.0% | |
| ! | TTGGCACATGCTTGGTGACT+TGG | + | chr7_4:56538171-56538190 | Msa1164770:intron | 50.0% |
| !!! | CTCTACATTTTGGGACCTGG+AGG | - | chr7_4:56538395-56538414 | None:intergenic | 50.0% |
| ACACCGATCTCTCGTTGTTC+TGG | + | chr7_4:56538910-56538929 | Msa1164770:intron | 50.0% | |
| CAGCCAGAACAACGAGAGAT+CGG | - | chr7_4:56538916-56538935 | None:intergenic | 50.0% | |
| !! | AATGCTTCAGGCTCTGAGTG+AGG | + | chr7_4:56538984-56539003 | Msa1164770:intron | 50.0% |
| AAAAGCTGCCACCTTAGCGA+TGG | + | chr7_4:56539017-56539036 | Msa1164770:CDS | 50.0% | |
| GGAGAAAACTCCTGTTGTGC+AGG | + | chr7_4:56539419-56539438 | Msa1164770:CDS | 50.0% | |
| ! | GGAGGGTATAACCAAGGACA+TGG | - | chr7_4:56539699-56539718 | None:intergenic | 50.0% |
| TCCTTGGTTATACCCTCCTC+CGG | + | chr7_4:56539701-56539720 | Msa1164770:CDS | 50.0% | |
| TTATACCCTCCTCCGGACAT+TGG | + | chr7_4:56539708-56539727 | Msa1164770:CDS | 50.0% | |
| AACTTGGAGTAGCATGGCCA+AGG | - | chr7_4:56539914-56539933 | None:intergenic | 50.0% | |
| CGACGGACATGAGGAAGAAG+AGG | - | chr7_4:56536049-56536068 | None:intergenic | 55.0% | |
| AGGATCTTCCGACGGACATG+AGG | - | chr7_4:56536058-56536077 | None:intergenic | 55.0% | |
| TTCACGGGAGGATCTTCCGA+CGG | - | chr7_4:56536066-56536085 | None:intergenic | 55.0% | |
| GGAAGATCCTCCCGTGAAGA+CGG | + | chr7_4:56536068-56536087 | Msa1164770:CDS | 55.0% | |
| CGTGAAGACGGAGGAGATTG+AGG | + | chr7_4:56536080-56536099 | Msa1164770:CDS | 55.0% | |
| GAAGACGGAGGAGATTGAGG+CGG | + | chr7_4:56536083-56536102 | Msa1164770:CDS | 55.0% | |
| TCCTCACTCGGATCCTCCTA+CGG | + | chr7_4:56536215-56536234 | Msa1164770:CDS | 55.0% | |
| ACTCGGATCCTCCTACGGTT+AGG | + | chr7_4:56536220-56536239 | Msa1164770:CDS | 55.0% | |
| CTCGGATCCTCCTACGGTTA+GGG | + | chr7_4:56536221-56536240 | Msa1164770:CDS | 55.0% | |
| !! | GCTGCTGACTTGCAACAGCT+TGG | - | chr7_4:56537785-56537804 | None:intergenic | 55.0% |
| AGGCATCTTGCTCCACCTTC+AGG | - | chr7_4:56537878-56537897 | None:intergenic | 55.0% | |
| GCAAACAATTCGCCGTAGGC+AGG | + | chr7_4:56538074-56538093 | Msa1164770:CDS | 55.0% | |
| GCAGGAGTTGTCTATGTCCG+AGG | + | chr7_4:56539437-56539456 | Msa1164770:CDS | 55.0% | |
| ACCAGGTGCAGGTGATACCT+CGG | - | chr7_4:56539457-56539476 | None:intergenic | 55.0% | |
| !! | CATGGACTAGTACCAGGTGC+AGG | - | chr7_4:56539468-56539487 | None:intergenic | 55.0% |
| CTGCACCTGGTACTAGTCCA+TGG | + | chr7_4:56539466-56539485 | Msa1164770:CDS | 55.0% | |
| ! | TCCGGAGGAGGGTATAACCA+AGG | - | chr7_4:56539705-56539724 | None:intergenic | 55.0% |
| CGTTTCCAATGTCCGGAGGA+GGG | - | chr7_4:56539716-56539735 | None:intergenic | 55.0% | |
| CCTCCTCCGGACATTGGAAA+CGG | + | chr7_4:56539714-56539733 | Msa1164770:CDS | 55.0% | |
| TGTCCGTTTCCAATGTCCGG+AGG | - | chr7_4:56539720-56539739 | None:intergenic | 55.0% | |
| TCTTCTAGGCCACAGGAAGG+TGG | - | chr7_4:56539747-56539766 | None:intergenic | 55.0% | |
| ! | AGAGGCACGGAAGAGGAGAA+AGG | + | chr7_4:56540172-56540191 | Msa1164770:CDS | 55.0% |
| AGATCCTCCCGTGAAGACGG+AGG | + | chr7_4:56536071-56536090 | Msa1164770:CDS | 60.0% | |
| ATCTCCTCCGTCTTCACGGG+AGG | - | chr7_4:56536078-56536097 | None:intergenic | 60.0% | |
| GGCGGAGACTCTTGCTTACC+TGG | + | chr7_4:56536104-56536123 | Msa1164770:CDS | 60.0% | |
| ACCGTAGGAGGATCCGAGTG+AGG | - | chr7_4:56536219-56536238 | None:intergenic | 60.0% | |
| ! | TCCGAGGTATCACCTGCACC+TGG | + | chr7_4:56539453-56539472 | Msa1164770:CDS | 60.0% |
| CCGTTTCCAATGTCCGGAGG+AGG | - | chr7_4:56539717-56539736 | None:intergenic | 60.0% | |
| GGACAACAGCCACCTTCCTG+TGG | + | chr7_4:56539735-56539754 | Msa1164770:CDS | 60.0% | |
| GGATGCAGTTGCTGCAGCAG+AGG | + | chr7_4:56540154-56540173 | Msa1164770:CDS | 60.0% | |
| CAGTTGCTGCAGCAGAGGCA+CGG | + | chr7_4:56540159-56540178 | Msa1164770:CDS | 60.0% | |
| GACGGAGGAGATTGAGGCGG+CGG | + | chr7_4:56536086-56536105 | Msa1164770:CDS | 65.0% | |
| GGCGCATTGCTAGTCGTGCC+AGG | - | chr7_4:56536125-56536144 | None:intergenic | 65.0% | |
| ! | CTGCAGCAGAGGCACGGAAG+AGG | + | chr7_4:56540165-56540184 | Msa1164770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 56535979 | 56540247 | 56535979 | ID=Msa1164770;Name=Msa1164770 |
| chr7_4 | mRNA | 56535979 | 56540247 | 56535979 | ID=Msa1164770-mRNA-1;Parent=Msa1164770;Name=Msa1164770-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|6|0|498 |
| chr7_4 | exon | 56535979 | 56536242 | 56535979 | ID=Msa1164770-mRNA-1:exon:16862;Parent=Msa1164770-mRNA-1 |
| chr7_4 | exon | 56537780 | 56537947 | 56537780 | ID=Msa1164770-mRNA-1:exon:16863;Parent=Msa1164770-mRNA-1 |
| chr7_4 | exon | 56538018 | 56538095 | 56538018 | ID=Msa1164770-mRNA-1:exon:16864;Parent=Msa1164770-mRNA-1 |
| chr7_4 | exon | 56538994 | 56539059 | 56538994 | ID=Msa1164770-mRNA-1:exon:16865;Parent=Msa1164770-mRNA-1 |
| chr7_4 | exon | 56539224 | 56539289 | 56539224 | ID=Msa1164770-mRNA-1:exon:16866;Parent=Msa1164770-mRNA-1 |
| chr7_4 | exon | 56539393 | 56540247 | 56539393 | ID=Msa1164770-mRNA-1:exon:16867;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56535979 | 56536242 | 56535979 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56537780 | 56537947 | 56537780 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56538018 | 56538095 | 56538018 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56538994 | 56539059 | 56538994 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56539224 | 56539289 | 56539224 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| chr7_4 | CDS | 56539393 | 56540247 | 56539393 | ID=Msa1164770-mRNA-1:cds;Parent=Msa1164770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
