AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1043900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043900 MtrunA17_Chr1g0153691 89.676 339 9 1 1 313 1 339 0.0 608
Msa1043900 MtrunA17_Chr3g0133751 59.936 312 91 4 17 300 4 309 4.97e-124 358
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043900 AT4G33380.1 53.709 337 110 7 13 313 2 328 3.80e-112 328
Msa1043900 AT4G33380.2 53.116 337 110 8 13 313 2 326 6.80e-109 320

Find 128 sgRNAs with CRISPR-Local

Find 569 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAACGTTAAAAGTTATT+TGG 0.086222 7_2:-2063309 None:intergenic
CCCATCTCATTAATTTAAAA+AGG 0.189536 7_2:-2070808 None:intergenic
TAGAGGTGGGTTAAGGTTAC+TGG 0.202638 7_2:-2063237 None:intergenic
AATCAGCTGCACTATCTTTA+TGG 0.210691 7_2:-2069743 None:intergenic
TTTCATAGATCGATCTATTT+TGG 0.218153 7_2:+2063283 Msa1043900:five_prime_UTR
ACCAGATCAGATTCGGAAAA+TGG 0.226467 7_2:+2063838 Msa1043900:CDS
ATACAGAAGCAGTTGAAAAT+TGG 0.252051 7_2:+2069071 Msa1043900:intron
AAAATTGGAAGAAGTTAAAT+TGG 0.254431 7_2:+2069102 Msa1043900:CDS
ACCGGTGAAGTTAATGAAAT+TGG 0.259283 7_2:+2063892 Msa1043900:CDS
ATTCGTATATCAAAATTCTT+AGG 0.287997 7_2:-2070900 None:intergenic
CCTGATGGTGCAGAGGATTT+AGG 0.291489 7_2:+2069445 Msa1043900:CDS
TGGAAGAATCGAATCAAATT+AGG 0.298067 7_2:+2063858 Msa1043900:CDS
CCAGAGGAGGAAGTTCTTCC+AGG 0.300552 7_2:+2069642 Msa1043900:intron
TTCAACGTTAAAAGTTATTT+GGG 0.324118 7_2:-2063308 None:intergenic
ATGACGGTTCTGCGGTTAGA+TGG 0.328426 7_2:+2069709 Msa1043900:CDS
GCTACCTTGTAGATTATTAC+AGG 0.337269 7_2:+2070700 Msa1043900:three_prime_UTR
TTGAATAGCAGAAGCAATAA+TGG 0.346033 7_2:+2064107 Msa1043900:CDS
CTATCCTTAAAATTTAGTTT+TGG 0.353734 7_2:-2070539 None:intergenic
TCATAATCTGTATGAAGTTC+AGG 0.363566 7_2:-2069690 None:intergenic
TGGTGGAATGAAGATAATAA+AGG 0.370093 7_2:+2063388 Msa1043900:five_prime_UTR
TGTCTGAGAGTGGTGGGATT+TGG 0.371400 7_2:-2063131 None:intergenic
CTATCATGATTCATTGTAAT+AGG 0.375338 7_2:+2071067 Msa1043900:three_prime_UTR
GAGAGTGGTGGGATTTGGTT+TGG 0.380355 7_2:-2063126 None:intergenic
TTTGGATCAACTAATCATTT+CGG 0.389967 7_2:-2063108 None:intergenic
TAAAAGCTTTGGAGTCTGAT+TGG 0.401742 7_2:+2069353 Msa1043900:CDS
TATCCAAAGGCCAATTTCTT+CGG 0.402468 7_2:-2069386 None:intergenic
GCTGTGCTTGCCGAAGAAAT+TGG 0.403708 7_2:+2069376 Msa1043900:CDS
AGATTCTTGGACGGTGTAAT+CGG 0.408270 7_2:+2070974 Msa1043900:three_prime_UTR
ACCTGCCTCTTCGTGAGAAA+TGG 0.421670 7_2:-2069152 None:intergenic
TGTGAATTTCGATACCATTC+GGG 0.422775 7_2:-2070566 None:intergenic
TCTACATTCGCAACCTCAAC+AGG 0.424607 7_2:-2069409 None:intergenic
TGTGAATCGAAACGTGGGAT+TGG 0.425535 7_2:-2063203 None:intergenic
ACTCTGTTACACATGTAGTT+GGG 0.426181 7_2:-2070948 None:intergenic
ATGTGAATTTCGATACCATT+CGG 0.427345 7_2:-2070567 None:intergenic
GTGATTGTTCCATGGGCCTC+TGG 0.427846 7_2:+2070602 Msa1043900:CDS
GATTTGTTAGAGGTGGGTTA+AGG 0.428795 7_2:-2063244 None:intergenic
CAGGCACTCAAAGCTAGCTT+TGG 0.432487 7_2:+2070719 Msa1043900:three_prime_UTR
AGGGATGCTAGTAAAAGCTT+TGG 0.435482 7_2:+2069342 Msa1043900:intron
TGATTGCTGTCAAGCTTGCT+TGG 0.436458 7_2:+2069761 Msa1043900:CDS
ACCAATTTCATTAACTTCAC+CGG 0.438559 7_2:-2063893 None:intergenic
AAAAGCTTTGGAGTCTGATT+GGG 0.441965 7_2:+2069354 Msa1043900:CDS
TGACGGTTCTGCGGTTAGAT+GGG 0.442080 7_2:+2069710 Msa1043900:CDS
AAATAGATCGATCTATGAAA+AGG 0.442748 7_2:-2063280 None:intergenic
TCAGGTGGAAGGGCCCTGCC+TGG 0.445771 7_2:-2069660 None:intergenic
CCTAAATCCTCTGCACCATC+AGG 0.447349 7_2:-2069445 None:intergenic
GGTGGAATGAAGATAATAAA+GGG 0.448672 7_2:+2063389 Msa1043900:five_prime_UTR
AACTCTGTTACACATGTAGT+TGG 0.456981 7_2:-2070949 None:intergenic
CTGCACCAGTGATTGTTCCA+TGG 0.458082 7_2:+2070594 Msa1043900:CDS
TACCATACCGCCTTCTGTGC+TGG 0.460777 7_2:-2070653 None:intergenic
CTCGCTCCATAGCAATGCCT+TGG 0.461557 7_2:-2064139 None:intergenic
TGCACCAGTGATTGTTCCAT+GGG 0.469487 7_2:+2070595 Msa1043900:CDS
GCAACTCAACCTCCGTACTT+TGG 0.472261 7_2:-2064031 None:intergenic
AGGAGGAAGTTCTTCCAGGC+AGG 0.474177 7_2:+2069646 Msa1043900:CDS
GCTTCTCTTTATATCTACTC+TGG 0.477025 7_2:+2063552 Msa1043900:CDS
TTGCCGAAGAAATTGGCCTT+TGG 0.480285 7_2:+2069383 Msa1043900:CDS
AACCTAGGATTTGTTAGAGG+TGG 0.483864 7_2:-2063251 None:intergenic
AAGATAATAAAGGGTTATGA+TGG 0.490304 7_2:+2063398 Msa1043900:exon
AAAAGGTGAAGGAATTAGAA+GGG 0.491684 7_2:+2063997 Msa1043900:intron
AATAGATCGATCTATGAAAA+GGG 0.491880 7_2:-2063279 None:intergenic
TGTATAAACCAGATCAGATT+CGG 0.492887 7_2:+2063831 Msa1043900:CDS
AAGAACCTAGGATTTGTTAG+AGG 0.493839 7_2:-2063254 None:intergenic
CAGGTTTGCACTCAGGTGGA+AGG 0.507192 7_2:-2069671 None:intergenic
TTCGTGAGAAATGGTAGAGT+TGG 0.509212 7_2:-2069143 None:intergenic
TCGCTCCATAGCAATGCCTT+GGG 0.512530 7_2:-2064138 None:intergenic
ACCATTTCTCACGAAGAGGC+AGG 0.512973 7_2:+2069151 Msa1043900:CDS
AGGTTTGCACTCAGGTGGAA+GGG 0.517485 7_2:-2069670 None:intergenic
ACCTAGGATTTGTTAGAGGT+GGG 0.518443 7_2:-2063250 None:intergenic
TGAAGTTCAGGTTTGCACTC+AGG 0.518943 7_2:-2069678 None:intergenic
AGAGGTGGGTTAAGGTTACT+GGG 0.519581 7_2:-2063236 None:intergenic
AATTAGGAAGTCATACAAAC+CGG 0.523612 7_2:+2063874 Msa1043900:CDS
CTTCTTTGGCACGTTTAGCA+TGG 0.526328 7_2:-2069785 None:intergenic
CATGCTAAACGTGCCAAAGA+AGG 0.528974 7_2:+2069786 Msa1043900:CDS
ATCTTCTGTTTCAAGTGCTG+AGG 0.533874 7_2:-2064053 None:intergenic
CAACTTCAATCAAGAGGAGG+TGG 0.534323 7_2:+2063441 Msa1043900:CDS
AAAAGAATCAAGGGCAATGG+TGG 0.536947 7_2:+2063371 Msa1043900:five_prime_UTR
TGTTGTTGTCTGAGAGTGGT+GGG 0.536980 7_2:-2063137 None:intergenic
AATCAAGAGGAGGTGGAAAG+TGG 0.537407 7_2:+2063448 Msa1043900:CDS
CTCTGTTACACATGTAGTTG+GGG 0.541132 7_2:-2070947 None:intergenic
GAAGTTAAATTGGTTTCTGC+GGG 0.545448 7_2:+2069112 Msa1043900:CDS
GGAACAATCACTGGTGCAGA+TGG 0.546225 7_2:-2070590 None:intergenic
GAGGCCCATGGAACAATCAC+TGG 0.549857 7_2:-2070599 None:intergenic
TATGATGGCAAGAAGTGAGT+GGG 0.550720 7_2:+2063413 Msa1043900:exon
GTATATCAAAATTCTTAGGA+TGG 0.551846 7_2:-2070896 None:intergenic
ACCCACCTCTAACAAATCCT+AGG 0.552538 7_2:+2063249 Msa1043900:five_prime_UTR
TAAATAATAACCAGCACAGA+AGG 0.557352 7_2:+2070643 Msa1043900:three_prime_UTR
AATAATCTACAAGGTAGCTC+CGG 0.557876 7_2:-2070695 None:intergenic
AACCAGCACAGAAGGCGGTA+TGG 0.560437 7_2:+2070651 Msa1043900:three_prime_UTR
CGCTTGTTGTTGTCTGAGAG+TGG 0.561319 7_2:-2063141 None:intergenic
TCACTCCCAAGGCATTGCTA+TGG 0.562744 7_2:+2064133 Msa1043900:CDS
GACGGTTCTGCGGTTAGATG+GGG 0.565108 7_2:+2069711 Msa1043900:CDS
AGTTCAGGTTTGCACTCAGG+TGG 0.566503 7_2:-2069675 None:intergenic
AGAAGTTAAATTGGTTTCTG+CGG 0.567216 7_2:+2069111 Msa1043900:CDS
TTAAATTGGTTTCTGCGGGA+AGG 0.567960 7_2:+2069116 Msa1043900:CDS
TAACACGAGCAATCTAAGTC+CGG 0.570660 7_2:+2070676 Msa1043900:three_prime_UTR
ACAACAAATAGCTTTGACAA+AGG 0.574459 7_2:-2070771 None:intergenic
CTTTCTTTACGTAACTGATG+AGG 0.577699 7_2:+2071024 Msa1043900:three_prime_UTR
CTCTACCATTTCTCACGAAG+AGG 0.580109 7_2:+2069147 Msa1043900:CDS
ATCAAGAGGAGGTGGAAAGT+GGG 0.584522 7_2:+2063449 Msa1043900:CDS
GGAGGAAGTTCTTCCAGGCA+GGG 0.592808 7_2:+2069647 Msa1043900:CDS
TTGTTGTTGTCTGAGAGTGG+TGG 0.595930 7_2:-2063138 None:intergenic
ATGATGGCAAGAAGTGAGTG+GGG 0.597932 7_2:+2063414 Msa1043900:CDS
TTCTTGGACGGTGTAATCGG+AGG 0.602263 7_2:+2070977 Msa1043900:three_prime_UTR
ATGAAAAGGGACAAGAACCT+AGG 0.602666 7_2:-2063266 None:intergenic
AGTGCCTGTAATAATCTACA+AGG 0.610237 7_2:-2070704 None:intergenic
TGGCCTTTGGATACCTGTTG+AGG 0.611467 7_2:+2069396 Msa1043900:CDS
ACATGAATTATATTATGAGT+AGG 0.614114 7_2:-2071100 None:intergenic
TTATGATGGCAAGAAGTGAG+TGG 0.618854 7_2:+2063412 Msa1043900:exon
AGCAGTTGAAAATTGGCGCA+AGG 0.619149 7_2:+2069078 Msa1043900:CDS
GAACTTCATACAGATTATGA+CGG 0.619220 7_2:+2069693 Msa1043900:CDS
AAAGGTGAAGGAATTAGAAG+GGG 0.620122 7_2:+2063998 Msa1043900:intron
GCAACAACTCCAGAGGCCCA+TGG 0.623742 7_2:-2070611 None:intergenic
ACCTCGTGTGAATCGAAACG+TGG 0.627933 7_2:-2063209 None:intergenic
CAAGGCATTGCTATGGAGCG+AGG 0.630111 7_2:+2064140 Msa1043900:CDS
TGACAAACCTGATGGTGCAG+AGG 0.630542 7_2:+2069438 Msa1043900:CDS
AATAATGGATCTCACTCCCA+AGG 0.631172 7_2:+2064122 Msa1043900:CDS
GGGATTCAACTTCAATCAAG+AGG 0.638194 7_2:+2063435 Msa1043900:CDS
TACAGATTATGACGGTTCTG+CGG 0.638373 7_2:+2069701 Msa1043900:CDS
GAAACAGAAGATAATTGATG+AGG 0.645919 7_2:+2064064 Msa1043900:CDS
CAACCTCAACAGGTATCCAA+AGG 0.650329 7_2:-2069399 None:intergenic
TATTTGTCAAAGCATGACAA+AGG 0.655322 7_2:-2070747 None:intergenic
TTAAGGATAGGTATCCCGAA+TGG 0.659919 7_2:+2070552 Msa1043900:CDS
TGATGGCAAGAAGTGAGTGG+GGG 0.665004 7_2:+2063415 Msa1043900:CDS
CCCACGTTTCGATTCACACG+AGG 0.669922 7_2:+2063208 Msa1043900:five_prime_UTR
ATAATAACCAGCACAGAAGG+CGG 0.674916 7_2:+2070646 Msa1043900:three_prime_UTR
ATTCAACTTCAATCAAGAGG+AGG 0.681950 7_2:+2063438 Msa1043900:CDS
TCAAGCAGCAACAACTCCAG+AGG 0.687351 7_2:-2070618 None:intergenic
GAACATAATGACAAACCTGA+TGG 0.690687 7_2:+2069430 Msa1043900:CDS
CCTCGTGTGAATCGAAACGT+GGG 0.696328 7_2:-2063208 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTGAAATATTTAAAAATT+TGG + chr7_2:2065610-2065629 Msa1043900:intron 10.0%
!! TTTATGTTTCAATCATAAAT+TGG + chr7_2:2065296-2065315 Msa1043900:intron 15.0%
!!! TCATTTTATATAACTTTGAA+AGG + chr7_2:2065539-2065558 Msa1043900:intron 15.0%
!!! TATTTTTTTCTTTTGGATAT+AGG + chr7_2:2066080-2066099 Msa1043900:intron 15.0%
!!! TTTTCATGATTTATTTATCT+AGG + chr7_2:2067757-2067776 Msa1043900:intron 15.0%
!! TTTCATGATTTATTTATCTA+GGG + chr7_2:2067758-2067777 Msa1043900:intron 15.0%
!! AATAAAAATAAAGTGAAAGT+TGG + chr7_2:2067911-2067930 Msa1043900:intron 15.0%
!!! ATTTATTCTGTTTTAATCTT+AGG + chr7_2:2068473-2068492 Msa1043900:intron 15.0%
!! TTCTTTAAATCTTTACATAT+TGG - chr7_2:2068870-2068889 None:intergenic 15.0%
!!! AATACAAAGATTAATTTTGA+TGG - chr7_2:2069604-2069623 None:intergenic 15.0%
!! TGAAAAAAAATGCAATATTT+GGG + chr7_2:2069809-2069828 Msa1043900:CDS 15.0%
!!! TCAAAATTAATTAAGCATTT+TGG - chr7_2:2070364-2070383 None:intergenic 15.0%
!! TTCAACGTTAAAAGTTATTT+GGG - chr7_2:2063311-2063330 None:intergenic 20.0%
!! TTTCAACGTTAAAAGTTATT+TGG - chr7_2:2063312-2063331 None:intergenic 20.0%
!!! TTTCTGTTTTAAGTAAAAAC+AGG - chr7_2:2063667-2063686 None:intergenic 20.0%
!! AAAAGACTAAAACATACTAA+AGG + chr7_2:2063684-2063703 Msa1043900:intron 20.0%
!! AAAGACTAAAACATACTAAA+GGG + chr7_2:2063685-2063704 Msa1043900:intron 20.0%
!!! TCCAAAAAATTGTGTTTTTA+AGG + chr7_2:2063711-2063730 Msa1043900:intron 20.0%
!!! ACCTTAAAAACACAATTTTT+TGG - chr7_2:2063715-2063734 None:intergenic 20.0%
!!! AATTGTGTTTTTAAGGTTTA+TGG + chr7_2:2063718-2063737 Msa1043900:intron 20.0%
!! ATGGTATATGATAAAACATT+AGG + chr7_2:2064739-2064758 Msa1043900:intron 20.0%
!! TGGTATATGATAAAACATTA+GGG + chr7_2:2064740-2064759 Msa1043900:intron 20.0%
!! TATATAAAATGATTCTCATG+AGG - chr7_2:2065531-2065550 None:intergenic 20.0%
!! AGAAAATGTCTTTATTCATT+TGG + chr7_2:2065576-2065595 Msa1043900:intron 20.0%
!! CATAATATATCTATTCAATG+TGG - chr7_2:2065696-2065715 None:intergenic 20.0%
!! CACATTGAATAGATATATTA+TGG + chr7_2:2065694-2065713 Msa1043900:intron 20.0%
!! AGTTTAGTAAAATTGAAGTA+TGG + chr7_2:2066123-2066142 Msa1043900:intron 20.0%
!!! CTTAGTTTGAAAACATTTTT+TGG + chr7_2:2066188-2066207 Msa1043900:intron 20.0%
!!! TTATCAAAACAATTGACTTT+GGG + chr7_2:2066924-2066943 Msa1043900:intron 20.0%
!! TGTGTATATTATAATCTTGT+AGG + chr7_2:2067161-2067180 Msa1043900:intron 20.0%
!! AATGAGATGTAACTTAATAA+AGG - chr7_2:2067439-2067458 None:intergenic 20.0%
!! CTAAACTATAATTCTGAATT+AGG - chr7_2:2067629-2067648 None:intergenic 20.0%
!!! TATATTTTAGTATGATGTGT+AGG + chr7_2:2067656-2067675 Msa1043900:intron 20.0%
!! ATAATGCATAACAAAATTGA+AGG + chr7_2:2068158-2068177 Msa1043900:intron 20.0%
!! AAATCTCTTTCAAATTCTTA+GGG + chr7_2:2068286-2068305 Msa1043900:intron 20.0%
!! AAAATTGGAAGAAGTTAAAT+TGG + chr7_2:2069102-2069121 Msa1043900:CDS 20.0%
!! GTGAAAAAAAATGCAATATT+TGG + chr7_2:2069808-2069827 Msa1043900:CDS 20.0%
!!! CTTTTCACCTTATTTTTTTT+TGG + chr7_2:2070046-2070065 Msa1043900:intron 20.0%
!!! GAAACCAAAACTAAATTTTA+AGG + chr7_2:2070535-2070554 Msa1043900:CDS 20.0%
!!! CTATCCTTAAAATTTAGTTT+TGG - chr7_2:2070542-2070561 None:intergenic 20.0%
!!! CAAAACTAAATTTTAAGGAT+AGG + chr7_2:2070540-2070559 Msa1043900:CDS 20.0%
!!! CCTTTTTAAATTAATGAGAT+GGG + chr7_2:2070808-2070827 Msa1043900:three_prime_UTR 20.0%
!!! CTTTTTAAATTAATGAGATG+GGG + chr7_2:2070809-2070828 Msa1043900:three_prime_UTR 20.0%
!!! TTTTTAAATTAATGAGATGG+GGG + chr7_2:2070810-2070829 Msa1043900:three_prime_UTR 20.0%
!! ATTCGTATATCAAAATTCTT+AGG - chr7_2:2070903-2070922 None:intergenic 20.0%
!!! TAAGAATTTTGATATACGAA+TGG + chr7_2:2070902-2070921 Msa1043900:three_prime_UTR 20.0%
!! ACATGAATTATATTATGAGT+AGG - chr7_2:2071103-2071122 None:intergenic 20.0%
! TTTGGATCAACTAATCATTT+CGG - chr7_2:2063111-2063130 None:intergenic 25.0%
! AATAGATCGATCTATGAAAA+GGG - chr7_2:2063282-2063301 None:intergenic 25.0%
! AAATAGATCGATCTATGAAA+AGG - chr7_2:2063283-2063302 None:intergenic 25.0%
!! TTTCATAGATCGATCTATTT+TGG + chr7_2:2063283-2063302 Msa1043900:five_prime_UTR 25.0%
! AAGATAATAAAGGGTTATGA+TGG + chr7_2:2063398-2063417 Msa1043900:exon 25.0%
! AACATGACATGCTTAAAAAA+AGG - chr7_2:2063611-2063630 None:intergenic 25.0%
!!! TTTTTTTAGACATCCCAAAA+TGG + chr7_2:2063744-2063763 Msa1043900:intron 25.0%
!!! TTTTAACTAAGATTGTTGTG+TGG + chr7_2:2063794-2063813 Msa1043900:intron 25.0%
! TGAATACTTTGTGTGAAAAA+AGG + chr7_2:2063980-2063999 Msa1043900:intron 25.0%
! TAGAACACTTAATAAAGAGA+TGG + chr7_2:2064460-2064479 Msa1043900:intron 25.0%
! AGAACACTTAATAAAGAGAT+GGG + chr7_2:2064461-2064480 Msa1043900:intron 25.0%
!! TAATGAGTTGGATAGAAATA+TGG + chr7_2:2064720-2064739 Msa1043900:intron 25.0%
! TACAAAATGTTGTCAAATAG+TGG - chr7_2:2064907-2064926 None:intergenic 25.0%
! TGACATCATTATATTAAGCT+AGG + chr7_2:2065025-2065044 Msa1043900:intron 25.0%
!!! TTTTTTCTTCTAGAGTAAAC+TGG + chr7_2:2065269-2065288 Msa1043900:intron 25.0%
!!! ACATGTTTTTTCTTCTTCTT+TGG + chr7_2:2065417-2065436 Msa1043900:intron 25.0%
!!! TGGATAGTATCAATTGATTT+TGG + chr7_2:2065437-2065456 Msa1043900:intron 25.0%
! GTTCAATTATTCAAATGTCT+AGG + chr7_2:2065465-2065484 Msa1043900:intron 25.0%
! GTTGATATCATCTAAGAATT+TGG - chr7_2:2065795-2065814 None:intergenic 25.0%
! CTCCTTCTAAATATGTTATT+GGG + chr7_2:2065816-2065835 Msa1043900:intron 25.0%
!!! GCTTGAGTATTTTTTTCTTT+TGG + chr7_2:2066073-2066092 Msa1043900:intron 25.0%
! TTAGTAAAATTGAAGTATGG+TGG + chr7_2:2066126-2066145 Msa1043900:intron 25.0%
! TGAAAATATCATATCTAACC+TGG + chr7_2:2066212-2066231 Msa1043900:intron 25.0%
!! TTTGTTGTATACAACTATCT+TGG + chr7_2:2066527-2066546 Msa1043900:intron 25.0%
! TTGTTGTATACAACTATCTT+GGG + chr7_2:2066528-2066547 Msa1043900:intron 25.0%
! TAAGAAAGATGAATCTTGAA+TGG + chr7_2:2066766-2066785 Msa1043900:intron 25.0%
! TGTAAGAGTTAAATTCAAGA+TGG - chr7_2:2066806-2066825 None:intergenic 25.0%
!! CTTATCAAAACAATTGACTT+TGG + chr7_2:2066923-2066942 Msa1043900:intron 25.0%
!! TATCAAAACAATTGACTTTG+GGG + chr7_2:2066925-2066944 Msa1043900:intron 25.0%
!!! TTTTTTTCCATTCTCTGAAA+AGG + chr7_2:2066988-2067007 Msa1043900:intron 25.0%
!!! TCATTTTTGTGTTTAGTCTT+TGG - chr7_2:2067358-2067377 None:intergenic 25.0%
! CAACTTCTTAATTGAACATT+TGG + chr7_2:2067811-2067830 Msa1043900:intron 25.0%
! TTAAATGTTGTGAACAAACA+TGG - chr7_2:2067868-2067887 None:intergenic 25.0%
! TGCTGTTAAATTATGAAAGA+TGG + chr7_2:2067988-2068007 Msa1043900:intron 25.0%
! GCTGTTAAATTATGAAAGAT+GGG + chr7_2:2067989-2068008 Msa1043900:intron 25.0%
! TTAAATTATGAAAGATGGGA+GGG + chr7_2:2067993-2068012 Msa1043900:intron 25.0%
! GAAATCTCTTTCAAATTCTT+AGG + chr7_2:2068285-2068304 Msa1043900:intron 25.0%
! TGTAAATAATCTCACTTACT+AGG - chr7_2:2068373-2068392 None:intergenic 25.0%
! AGTAAGTGAGATTATTTACA+TGG + chr7_2:2068373-2068392 Msa1043900:intron 25.0%
! GTAATAGAAAGCTAAAACAT+TGG - chr7_2:2068528-2068547 None:intergenic 25.0%
!!! TCGTTTTTTTTCCTTCATTT+TGG - chr7_2:2068736-2068755 None:intergenic 25.0%
! AAAATGAAGGAAAAAAAACG+AGG + chr7_2:2068735-2068754 Msa1043900:intron 25.0%
! AAATGAAGGAAAAAAAACGA+GGG + chr7_2:2068736-2068755 Msa1043900:intron 25.0%
!! AGTGAGTTGAAATAAATATC+AGG - chr7_2:2069313-2069332 None:intergenic 25.0%
! TATTTATCAGCACAAACATA+TGG + chr7_2:2069869-2069888 Msa1043900:intron 25.0%
!! GTTTCCTCTTTTCTATATAA+AGG + chr7_2:2069932-2069951 Msa1043900:intron 25.0%
!!! TTCACCTTATTTTTTTTTGG+TGG + chr7_2:2070049-2070068 Msa1043900:intron 25.0%
! TTGTAAAGCTTACGAAAATA+AGG - chr7_2:2070157-2070176 None:intergenic 25.0%
!!! TTGCAAAATAGAAGTATCAA+AGG - chr7_2:2070388-2070407 None:intergenic 25.0%
!! GCCTTTTTAAATTAATGAGA+TGG + chr7_2:2070807-2070826 Msa1043900:three_prime_UTR 25.0%
! CCCATCTCATTAATTTAAAA+AGG - chr7_2:2070811-2070830 None:intergenic 25.0%
! GTATATCAAAATTCTTAGGA+TGG - chr7_2:2070899-2070918 None:intergenic 25.0%
! CTATCATGATTCATTGTAAT+AGG + chr7_2:2071067-2071086 Msa1043900:three_prime_UTR 25.0%
! CGTTAAAGTTGCAATCTTTT+TGG + chr7_2:2063335-2063354 Msa1043900:five_prime_UTR 30.0%
AGGAAGAGAAAAAGAATCAA+GGG + chr7_2:2063362-2063381 Msa1043900:five_prime_UTR 30.0%
TGGTGGAATGAAGATAATAA+AGG + chr7_2:2063388-2063407 Msa1043900:five_prime_UTR 30.0%
GGTGGAATGAAGATAATAAA+GGG + chr7_2:2063389-2063408 Msa1043900:five_prime_UTR 30.0%
! AGTCTAAGTCTTTCCATTTT+GGG - chr7_2:2063760-2063779 None:intergenic 30.0%
! TAGTCTAAGTCTTTCCATTT+TGG - chr7_2:2063761-2063780 None:intergenic 30.0%
TGTATAAACCAGATCAGATT+CGG + chr7_2:2063831-2063850 Msa1043900:CDS 30.0%
TGGAAGAATCGAATCAAATT+AGG + chr7_2:2063858-2063877 Msa1043900:CDS 30.0%
AATTAGGAAGTCATACAAAC+CGG + chr7_2:2063874-2063893 Msa1043900:CDS 30.0%
ACCAATTTCATTAACTTCAC+CGG - chr7_2:2063896-2063915 None:intergenic 30.0%
AAAAAGGTGAAGGAATTAGA+AGG + chr7_2:2063996-2064015 Msa1043900:intron 30.0%
AAAAGGTGAAGGAATTAGAA+GGG + chr7_2:2063997-2064016 Msa1043900:intron 30.0%
GAAACAGAAGATAATTGATG+AGG + chr7_2:2064064-2064083 Msa1043900:CDS 30.0%
TTGAATAGCAGAAGCAATAA+TGG + chr7_2:2064107-2064126 Msa1043900:CDS 30.0%
TAAAAACTCGACACAACAAA+CGG + chr7_2:2064268-2064287 Msa1043900:intron 30.0%
ACATGATCAATTTCATCTGT+AGG + chr7_2:2064327-2064346 Msa1043900:intron 30.0%
TCTCTACCTAAAAATCAAGT+TGG - chr7_2:2064379-2064398 None:intergenic 30.0%
GAACACTTAATAAAGAGATG+GGG + chr7_2:2064462-2064481 Msa1043900:intron 30.0%
ATAGCATTAAAGAGAGAGTT+GGG + chr7_2:2064531-2064550 Msa1043900:intron 30.0%
AGCACCTATTGTATAAAAGA+TGG + chr7_2:2064556-2064575 Msa1043900:intron 30.0%
ACCTATTGTATAAAAGATGG+TGG + chr7_2:2064559-2064578 Msa1043900:intron 30.0%
! TCCACCATCTTTTATACAAT+AGG - chr7_2:2064563-2064582 None:intergenic 30.0%
!! TATAAAAGATGGTGGAAACT+AGG + chr7_2:2064567-2064586 Msa1043900:intron 30.0%
AAACTAGGCTTAGATGATTT+GGG + chr7_2:2064582-2064601 Msa1043900:intron 30.0%
AGATCTAGAGATTAATGAGT+TGG + chr7_2:2064708-2064727 Msa1043900:intron 30.0%
TTGTAGATAGCTGAAAATAG+TGG + chr7_2:2064847-2064866 Msa1043900:intron 30.0%
TTGTACTAAATAGCATATCG+CGG + chr7_2:2064922-2064941 Msa1043900:intron 30.0%
! ATCAGTGTTGTTAAATAGCA+CGG - chr7_2:2064996-2065015 None:intergenic 30.0%
TTATATTAAGCTAGGAGATC+AGG + chr7_2:2065033-2065052 Msa1043900:intron 30.0%
AAAAACATCAAATGTTCCGA+GGG - chr7_2:2065083-2065102 None:intergenic 30.0%
AAAAAACATCAAATGTTCCG+AGG - chr7_2:2065084-2065103 None:intergenic 30.0%
TAGAGATCAATGTGTTCTTA+AGG - chr7_2:2065112-2065131 None:intergenic 30.0%
TGTTTCAGACCTAATAATCA+TGG - chr7_2:2065161-2065180 None:intergenic 30.0%
! AGTTGCTTTATGTATGTCTT+AGG + chr7_2:2065326-2065345 Msa1043900:intron 30.0%
! GTTGCTTTATGTATGTCTTA+GGG + chr7_2:2065327-2065346 Msa1043900:intron 30.0%
GACATTTGAATAATTGAACC+AGG - chr7_2:2065464-2065483 None:intergenic 30.0%
GCTCCTTCTAAATATGTTAT+TGG + chr7_2:2065815-2065834 Msa1043900:intron 30.0%
GACCCAATAACATATTTAGA+AGG - chr7_2:2065821-2065840 None:intergenic 30.0%
TTCAGAACATGGAAAAAAAC+AGG - chr7_2:2065845-2065864 None:intergenic 30.0%
TGTCTTAGAGTTTGATCTTT+AGG - chr7_2:2066051-2066070 None:intergenic 30.0%
!! AAAGATCAAACTCTAAGACA+TGG + chr7_2:2066051-2066070 Msa1043900:intron 30.0%
!! TATAGGTTTTAGTAGAAGTG+TGG + chr7_2:2066097-2066116 Msa1043900:intron 30.0%
! TAAAATTGAAGTATGGTGGA+AGG + chr7_2:2066130-2066149 Msa1043900:intron 30.0%
! AAAATTGAAGTATGGTGGAA+GGG + chr7_2:2066131-2066150 Msa1043900:intron 30.0%
AACCTGGTATTAGTAATTGA+TGG + chr7_2:2066228-2066247 Msa1043900:intron 30.0%
TACCATCAATTACTAATACC+AGG - chr7_2:2066233-2066252 None:intergenic 30.0%
AGTTCATAGTGAACAAAATG+GGG - chr7_2:2066256-2066275 None:intergenic 30.0%
GAGTTCATAGTGAACAAAAT+GGG - chr7_2:2066257-2066276 None:intergenic 30.0%
TGAGTTCATAGTGAACAAAA+TGG - chr7_2:2066258-2066277 None:intergenic 30.0%
! TTTTGTTCACTATGAACTCA+AGG + chr7_2:2066258-2066277 Msa1043900:intron 30.0%
ATAAAAGCTGTGAATCACTT+CGG + chr7_2:2066339-2066358 Msa1043900:intron 30.0%
TCATAGAATGTTGTGAGTAT+TGG - chr7_2:2066400-2066419 None:intergenic 30.0%
CTCACAACATTCTATGATTA+AGG + chr7_2:2066403-2066422 Msa1043900:intron 30.0%
ACAACATTCTATGATTAAGG+TGG + chr7_2:2066406-2066425 Msa1043900:intron 30.0%
CAACATTCTATGATTAAGGT+GGG + chr7_2:2066407-2066426 Msa1043900:intron 30.0%
AAACAGTTACATAGCAATCA+TGG - chr7_2:2066498-2066517 None:intergenic 30.0%
AATCACGCTTACATCAAATT+GGG - chr7_2:2066634-2066653 None:intergenic 30.0%
TAATCACGCTTACATCAAAT+TGG - chr7_2:2066635-2066654 None:intergenic 30.0%
! ATCAAAACAATTGACTTTGG+GGG + chr7_2:2066926-2066945 Msa1043900:intron 30.0%
!! ATTTATAGACTTGTTGACCA+TGG - chr7_2:2067404-2067423 None:intergenic 30.0%
TGGTCAACAAGTCTATAAAT+TGG + chr7_2:2067404-2067423 Msa1043900:intron 30.0%
! ACCTTTTTCTCATTGCTTAT+GGG + chr7_2:2067601-2067620 Msa1043900:intron 30.0%
TGTAGACCAACAAATGTATA+TGG + chr7_2:2067963-2067982 Msa1043900:intron 30.0%
GTTAAATTATGAAAGATGGG+AGG + chr7_2:2067992-2068011 Msa1043900:intron 30.0%
TAAATTATGAAAGATGGGAG+GGG + chr7_2:2067994-2068013 Msa1043900:intron 30.0%
GACTGGACATTAAAAAAACT+AGG - chr7_2:2068053-2068072 None:intergenic 30.0%
ATGCATAACAAAATTGAAGG+AGG + chr7_2:2068161-2068180 Msa1043900:intron 30.0%
TAATCTCACTTACTAGGAAA+AGG - chr7_2:2068367-2068386 None:intergenic 30.0%
GTGTTTAGTAAGAAGCTAAA+GGG - chr7_2:2068446-2068465 None:intergenic 30.0%
TGTGTTTAGTAAGAAGCTAA+AGG - chr7_2:2068447-2068466 None:intergenic 30.0%
AAGGAATATAGAAGATCTTC+CGG - chr7_2:2068796-2068815 None:intergenic 30.0%
!! TTTTTGTTGGTCTAACACAA+AGG - chr7_2:2068815-2068834 None:intergenic 30.0%
GTGTTAGACCAACAAAAAAA+AGG + chr7_2:2068817-2068836 Msa1043900:intron 30.0%
!!! TTGGGATTCCTTTTTTTTGT+TGG - chr7_2:2068828-2068847 None:intergenic 30.0%
GACTAATAGTTGCAAAAGAT+GGG - chr7_2:2068960-2068979 None:intergenic 30.0%
TGACTAATAGTTGCAAAAGA+TGG - chr7_2:2068961-2068980 None:intergenic 30.0%
AACAGTAATTCTGTGTAATC+TGG + chr7_2:2069018-2069037 Msa1043900:intron 30.0%
ATACAGAAGCAGTTGAAAAT+TGG + chr7_2:2069071-2069090 Msa1043900:intron 30.0%
! AGAAGTTAAATTGGTTTCTG+CGG + chr7_2:2069111-2069130 Msa1043900:CDS 30.0%
TTCAACTCACTATTACTACT+AGG + chr7_2:2069322-2069341 Msa1043900:intron 30.0%
TCAACTCACTATTACTACTA+GGG + chr7_2:2069323-2069342 Msa1043900:intron 30.0%
!! TTGTTGTGATAGTTGTTTTC+TGG + chr7_2:2069525-2069544 Msa1043900:intron 30.0%
TCATAATCTGTATGAAGTTC+AGG - chr7_2:2069693-2069712 None:intergenic 30.0%
GAACTTCATACAGATTATGA+CGG + chr7_2:2069693-2069712 Msa1043900:CDS 30.0%
!!! GCATTTTTTTTCACCTTCTT+TGG - chr7_2:2069802-2069821 None:intergenic 30.0%
! TGTTTGTGCTGATAAATATC+TGG - chr7_2:2069867-2069886 None:intergenic 30.0%
AAGAGGAAACATATTCATCA+GGG - chr7_2:2069922-2069941 None:intergenic 30.0%
AAAGAGGAAACATATTCATC+AGG - chr7_2:2069923-2069942 None:intergenic 30.0%
AGGTCCTTTATATAGAAAAG+AGG - chr7_2:2069939-2069958 None:intergenic 30.0%
!!! ACCTTATTTTTTTTTGGTGG+TGG + chr7_2:2070052-2070071 Msa1043900:intron 30.0%
! ACCTTGCATATTTTATGCAT+TGG + chr7_2:2070093-2070112 Msa1043900:intron 30.0%
ACCAATGCATAAAATATGCA+AGG - chr7_2:2070097-2070116 None:intergenic 30.0%
CTTACGAAAATAAGGTGAAA+AGG - chr7_2:2070149-2070168 None:intergenic 30.0%
GACGAAAACAAAAAAAAGCA+CGG - chr7_2:2070442-2070461 None:intergenic 30.0%
TCCAGCTAATATACACTTAT+TGG + chr7_2:2070493-2070512 Msa1043900:intron 30.0%
ACCAATAAGTGTATATTAGC+TGG - chr7_2:2070497-2070516 None:intergenic 30.0%
ATGTGAATTTCGATACCATT+CGG - chr7_2:2070570-2070589 None:intergenic 30.0%
TAAATAATAACCAGCACAGA+AGG + chr7_2:2070643-2070662 Msa1043900:three_prime_UTR 30.0%
TATTTGTCAAAGCATGACAA+AGG - chr7_2:2070750-2070769 None:intergenic 30.0%
!! ACAACAAATAGCTTTGACAA+AGG - chr7_2:2070774-2070793 None:intergenic 30.0%
!! TAAAGGAAATTTTTCGGACA+TGG + chr7_2:2070835-2070854 Msa1043900:three_prime_UTR 30.0%
!! AAATTTTTCGGACATGGTTT+TGG + chr7_2:2070841-2070860 Msa1043900:three_prime_UTR 30.0%
!!! GTAACAGAGTTTTAGATTCT+TGG + chr7_2:2070961-2070980 Msa1043900:three_prime_UTR 30.0%
!! AAGAACCTAGGATTTGTTAG+AGG - chr7_2:2063257-2063276 None:intergenic 35.0%
GAGGAAGAGAAAAAGAATCA+AGG + chr7_2:2063361-2063380 Msa1043900:five_prime_UTR 35.0%
AGAAAAAGAATCAAGGGCAA+TGG + chr7_2:2063368-2063387 Msa1043900:five_prime_UTR 35.0%
ATTCAACTTCAATCAAGAGG+AGG + chr7_2:2063438-2063457 Msa1043900:CDS 35.0%
GCTTCTCTTTATATCTACTC+TGG + chr7_2:2063552-2063571 Msa1043900:CDS 35.0%
ACCGGTGAAGTTAATGAAAT+TGG + chr7_2:2063892-2063911 Msa1043900:CDS 35.0%
!! GTAATCAGTTGTTGTTTACG+TGG + chr7_2:2063928-2063947 Msa1043900:intron 35.0%
CTTTGTGTGAAAAAAGGTGA+AGG + chr7_2:2063986-2064005 Msa1043900:intron 35.0%
AAAGGTGAAGGAATTAGAAG+GGG + chr7_2:2063998-2064017 Msa1043900:intron 35.0%
TCTCAATGCTTAATCACTGA+AGG - chr7_2:2064208-2064227 None:intergenic 35.0%
AAAAACTCGACACAACAAAC+GGG + chr7_2:2064269-2064288 Msa1043900:intron 35.0%
CAATTTCATCTGTAGGTGAT+TGG + chr7_2:2064334-2064353 Msa1043900:intron 35.0%
TTGGAAAATTGACAGTTCAC+TGG + chr7_2:2064353-2064372 Msa1043900:intron 35.0%
GATAGCATTAAAGAGAGAGT+TGG + chr7_2:2064530-2064549 Msa1043900:intron 35.0%
TAGCATTAAAGAGAGAGTTG+GGG + chr7_2:2064532-2064551 Msa1043900:intron 35.0%
GAAACTAGGCTTAGATGATT+TGG + chr7_2:2064581-2064600 Msa1043900:intron 35.0%
CACCTATTGATACTGTAGTA+AGG + chr7_2:2064605-2064624 Msa1043900:intron 35.0%
CTCCTTACTACAGTATCAAT+AGG - chr7_2:2064610-2064629 None:intergenic 35.0%
CAAGTCTTAACTCACTAAGT+GGG - chr7_2:2064790-2064809 None:intergenic 35.0%
GTTAAATAGCACGGATATAG+AGG - chr7_2:2064987-2065006 None:intergenic 35.0%
TTAATATGACCATTGACCCT+CGG + chr7_2:2065064-2065083 Msa1043900:intron 35.0%
CAGACCTAATAATCATGGAT+CGG - chr7_2:2065156-2065175 None:intergenic 35.0%
CGGCTACATTAAAATAGAAC+TGG - chr7_2:2065226-2065245 None:intergenic 35.0%
TTAATGTAGCCGTTACTTGT+TGG + chr7_2:2065234-2065253 Msa1043900:intron 35.0%
TAATGTAGCCGTTACTTGTT+GGG + chr7_2:2065235-2065254 Msa1043900:intron 35.0%
!! GTATCAATTGATTTTGGTCC+TGG + chr7_2:2065443-2065462 Msa1043900:intron 35.0%
AATATACCCAGAAGTGGTTT+AGG - chr7_2:2065508-2065527 None:intergenic 35.0%
!! CAATTTTGTGGTGTTGAGTT+AGG + chr7_2:2065761-2065780 Msa1043900:intron 35.0%
GAAGGGACACAAGTAAATAT+GGG + chr7_2:2066148-2066167 Msa1043900:intron 35.0%
AAGGGACACAAGTAAATATG+GGG + chr7_2:2066149-2066168 Msa1043900:intron 35.0%
CACAAGTAAATATGGGGTTA+TGG + chr7_2:2066155-2066174 Msa1043900:intron 35.0%
AAGTAAATATGGGGTTATGG+AGG + chr7_2:2066158-2066177 Msa1043900:intron 35.0%
CACTATGAACTCAAGGAATA+TGG + chr7_2:2066265-2066284 Msa1043900:intron 35.0%
!!! TGAGTATTGGAATGTTTTGC+AGG - chr7_2:2066387-2066406 None:intergenic 35.0%
! ACATAGTTTTCCTCCTATTC+AGG - chr7_2:2066456-2066475 None:intergenic 35.0%
CATAGCAATCATGGTAAACA+AGG - chr7_2:2066489-2066508 None:intergenic 35.0%
ATCACGCTTACATCAAATTG+GGG - chr7_2:2066633-2066652 None:intergenic 35.0%
TGCTAGTGGAAGCAAATATA+GGG - chr7_2:2066668-2066687 None:intergenic 35.0%
ATGCTAGTGGAAGCAAATAT+AGG - chr7_2:2066669-2066688 None:intergenic 35.0%
! TTCCACTAGCATTGAAGTTA+TGG + chr7_2:2066677-2066696 Msa1043900:intron 35.0%
TCTCATCCTTAGAGATAAAC+TGG + chr7_2:2066828-2066847 Msa1043900:intron 35.0%
! TAATGCAACTTTTGAACCTC+TGG - chr7_2:2066856-2066875 None:intergenic 35.0%
! CATGTATCCTTTTCAGAGAA+TGG - chr7_2:2066998-2067017 None:intergenic 35.0%
TAAAAGGTTATCCACCAACA+AGG - chr7_2:2067204-2067223 None:intergenic 35.0%
CATCTATTCTGAACTGGATT+TGG + chr7_2:2067275-2067294 Msa1043900:intron 35.0%
AAGTCCCAAATCAAACCATA+TGG + chr7_2:2067306-2067325 Msa1043900:intron 35.0%
AGTCCCAAATCAAACCATAT+GGG + chr7_2:2067307-2067326 Msa1043900:intron 35.0%
! ACTCCCATATGGTTTGATTT+GGG - chr7_2:2067313-2067332 None:intergenic 35.0%
ACAGTGGTGAATCTATGTTT+GGG - chr7_2:2067478-2067497 None:intergenic 35.0%
GAAAACGTGATGAATCACTT+CGG - chr7_2:2067510-2067529 None:intergenic 35.0%
! CACCTTTTTCTCATTGCTTA+TGG + chr7_2:2067600-2067619 Msa1043900:intron 35.0%
ACCCATAAGCAATGAGAAAA+AGG - chr7_2:2067605-2067624 None:intergenic 35.0%
CCTTTCACAAATCAGTAACA+CGG - chr7_2:2067721-2067740 None:intergenic 35.0%
AGCATGCCATATACATTTGT+TGG - chr7_2:2067972-2067991 None:intergenic 35.0%
AAATTATGAAAGATGGGAGG+GGG + chr7_2:2067995-2068014 Msa1043900:intron 35.0%
! CTTTTGGCGTTTACAAAGTA+AGG + chr7_2:2068107-2068126 Msa1043900:intron 35.0%
AGGAAAGGAAACAATGATAC+GGG - chr7_2:2068187-2068206 None:intergenic 35.0%
GAGGAAAGGAAACAATGATA+CGG - chr7_2:2068188-2068207 None:intergenic 35.0%
TAAAGGAATTGTGTGAGGAA+AGG - chr7_2:2068202-2068221 None:intergenic 35.0%
TTGTAAGTTGTAACACCCAA+AGG - chr7_2:2068326-2068345 None:intergenic 35.0%
ATCTCATTATTAGCTAACGG+GGG - chr7_2:2068626-2068645 None:intergenic 35.0%
CATCTCATTATTAGCTAACG+GGG - chr7_2:2068627-2068646 None:intergenic 35.0%
CCATCTCATTATTAGCTAAC+GGG - chr7_2:2068628-2068647 None:intergenic 35.0%
GCCATCTCATTATTAGCTAA+CGG - chr7_2:2068629-2068648 None:intergenic 35.0%
!! ATATTCAAAAGAGAGCATCG+TGG + chr7_2:2068672-2068691 Msa1043900:intron 35.0%
! CATGTCTAGAACCAAAATGA+AGG + chr7_2:2068722-2068741 Msa1043900:intron 35.0%
AAAAAACGAGGGTTCAAAGT+TGG + chr7_2:2068747-2068766 Msa1043900:intron 35.0%
AAAAACGAGGGTTCAAAGTT+GGG + chr7_2:2068748-2068767 Msa1043900:intron 35.0%
TGGTTTACATTTACAGTCAC+CGG + chr7_2:2068774-2068793 Msa1043900:intron 35.0%
CTCGTTCTAACGCAAAAATT+TGG - chr7_2:2068936-2068955 None:intergenic 35.0%
! CAAATTTTTGCGTTAGAACG+AGG + chr7_2:2068934-2068953 Msa1043900:intron 35.0%
AAATTGGCGCAAGGAAAAAT+TGG + chr7_2:2069087-2069106 Msa1043900:CDS 35.0%
! GAAGTTAAATTGGTTTCTGC+GGG + chr7_2:2069112-2069131 Msa1043900:CDS 35.0%
!! TAAAAGCTTTGGAGTCTGAT+TGG + chr7_2:2069353-2069372 Msa1043900:CDS 35.0%
!! AAAAGCTTTGGAGTCTGATT+GGG + chr7_2:2069354-2069373 Msa1043900:CDS 35.0%
TATCCAAAGGCCAATTTCTT+CGG - chr7_2:2069389-2069408 None:intergenic 35.0%
GAACATAATGACAAACCTGA+TGG + chr7_2:2069430-2069449 Msa1043900:CDS 35.0%
! GAGGATTTAGGTAATCGTTT+TGG + chr7_2:2069457-2069476 Msa1043900:intron 35.0%
CATATTCTAACACACGATAC+AGG - chr7_2:2069562-2069581 None:intergenic 35.0%
CTGTATCGTGTGTTAGAATA+TGG + chr7_2:2069560-2069579 Msa1043900:intron 35.0%
AATCAGCTGCACTATCTTTA+TGG - chr7_2:2069746-2069765 None:intergenic 35.0%
GAATGACATCCAAATTCTGA+CGG - chr7_2:2069843-2069862 None:intergenic 35.0%
TTCTATATAAAGGACCTGCT+TGG + chr7_2:2069942-2069961 Msa1043900:intron 35.0%
GCCACCACCAAAAAAAAATA+AGG - chr7_2:2070056-2070075 None:intergenic 35.0%
!!! TATTTTTTTTTGGTGGTGGC+CGG + chr7_2:2070056-2070075 Msa1043900:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr7_2:2070092-2070111 None:intergenic 35.0%
CCAATAAGTGTATACTAGCT+AGG - chr7_2:2070464-2070483 None:intergenic 35.0%
CCTAGCTAGTATACACTTAT+TGG + chr7_2:2070461-2070480 Msa1043900:intron 35.0%
CTTATTGGTATTCTGAATCC+AGG + chr7_2:2070476-2070495 Msa1043900:intron 35.0%
TGTGAATTTCGATACCATTC+GGG - chr7_2:2070569-2070588 None:intergenic 35.0%
AATAATCTACAAGGTAGCTC+CGG - chr7_2:2070698-2070717 None:intergenic 35.0%
GCTACCTTGTAGATTATTAC+AGG + chr7_2:2070700-2070719 Msa1043900:three_prime_UTR 35.0%
AGTGCCTGTAATAATCTACA+AGG - chr7_2:2070707-2070726 None:intergenic 35.0%
! GGGGAGTAAAGGAAATTTTT+CGG + chr7_2:2070829-2070848 Msa1043900:three_prime_UTR 35.0%
GGGGAAAAATCTGATGTTTA+AGG - chr7_2:2070931-2070950 None:intergenic 35.0%
ACTCTGTTACACATGTAGTT+GGG - chr7_2:2070951-2070970 None:intergenic 35.0%
AACTCTGTTACACATGTAGT+TGG - chr7_2:2070952-2070971 None:intergenic 35.0%
!!! CAGAGTTTTAGATTCTTGGA+CGG + chr7_2:2070965-2070984 Msa1043900:three_prime_UTR 35.0%
CTTTCTTTACGTAACTGATG+AGG + chr7_2:2071024-2071043 Msa1043900:three_prime_UTR 35.0%
!! GATTTGTTAGAGGTGGGTTA+AGG - chr7_2:2063247-2063266 None:intergenic 40.0%
!! ACCTAGGATTTGTTAGAGGT+GGG - chr7_2:2063253-2063272 None:intergenic 40.0%
!! AACCTAGGATTTGTTAGAGG+TGG - chr7_2:2063254-2063273 None:intergenic 40.0%
ATGAAAAGGGACAAGAACCT+AGG - chr7_2:2063269-2063288 None:intergenic 40.0%
!! GTTGCAATCTTTTTGGTCTG+AGG + chr7_2:2063342-2063361 Msa1043900:five_prime_UTR 40.0%
AAAAGAATCAAGGGCAATGG+TGG + chr7_2:2063371-2063390 Msa1043900:five_prime_UTR 40.0%
TTATGATGGCAAGAAGTGAG+TGG + chr7_2:2063412-2063431 Msa1043900:exon 40.0%
TATGATGGCAAGAAGTGAGT+GGG + chr7_2:2063413-2063432 Msa1043900:exon 40.0%
GGGATTCAACTTCAATCAAG+AGG + chr7_2:2063435-2063454 Msa1043900:CDS 40.0%
!! GTTGTGTGGTTTTTCAGTTG+TGG + chr7_2:2063808-2063827 Msa1043900:intron 40.0%
ACCAGATCAGATTCGGAAAA+TGG + chr7_2:2063838-2063857 Msa1043900:CDS 40.0%
! TCCATTTTCCGAATCTGATC+TGG - chr7_2:2063842-2063861 None:intergenic 40.0%
!! GGAGTTTTCAAGCCAAAGTA+CGG + chr7_2:2064019-2064038 Msa1043900:CDS 40.0%
! ATCTTCTGTTTCAAGTGCTG+AGG - chr7_2:2064056-2064075 None:intergenic 40.0%
!! AATAATGGATCTCACTCCCA+AGG + chr7_2:2064122-2064141 Msa1043900:CDS 40.0%
!!! TGTGTCGAGTTTTTAGCTCA+AGG - chr7_2:2064263-2064282 None:intergenic 40.0%
! CACTGGCCAACTTGATTTTT+AGG + chr7_2:2064370-2064389 Msa1043900:intron 40.0%
! AAGAGATGGGGATGTTTTGT+TGG + chr7_2:2064474-2064493 Msa1043900:intron 40.0%
!! GGGATGTTTTGTTGGATGTT+TGG + chr7_2:2064482-2064501 Msa1043900:intron 40.0%
AAGGAGAGTAGATCAGATGT+AGG + chr7_2:2064624-2064643 Msa1043900:intron 40.0%
AGGAGAGTAGATCAGATGTA+GGG + chr7_2:2064625-2064644 Msa1043900:intron 40.0%
TAGGGTAGTCAAATCACTAG+AGG + chr7_2:2064643-2064662 Msa1043900:intron 40.0%
AGTCAAATCACTAGAGGTAG+AGG + chr7_2:2064649-2064668 Msa1043900:intron 40.0%
CTTAACTCACTAAGTGGGAT+CGG - chr7_2:2064785-2064804 None:intergenic 40.0%
CCAAGTCTTAACTCACTAAG+TGG - chr7_2:2064791-2064810 None:intergenic 40.0%
CCACTTAGTGAGTTAAGACT+TGG + chr7_2:2064788-2064807 Msa1043900:intron 40.0%
CTTAGTGAGTTAAGACTTGG+TGG + chr7_2:2064791-2064810 Msa1043900:intron 40.0%
! GTGGTTGTTGTTGTTGTTGT+TGG + chr7_2:2064810-2064829 Msa1043900:intron 40.0%
ATAGTGGCTATAGCACTGTT+GGG - chr7_2:2064891-2064910 None:intergenic 40.0%
AATAGTGGCTATAGCACTGT+TGG - chr7_2:2064892-2064911 None:intergenic 40.0%
ATAGAGGAGTTGTAGCATAG+CGG - chr7_2:2064971-2064990 None:intergenic 40.0%
! CGTACCGATCCATGATTATT+AGG + chr7_2:2065149-2065168 Msa1043900:intron 40.0%
TATGACCACCCAACAAGTAA+CGG - chr7_2:2065246-2065265 None:intergenic 40.0%
TGATTGACCTAAACCACTTC+TGG + chr7_2:2065498-2065517 Msa1043900:intron 40.0%
GATTGACCTAAACCACTTCT+GGG + chr7_2:2065499-2065518 Msa1043900:intron 40.0%
ATGAGGAATATACCCAGAAG+TGG - chr7_2:2065514-2065533 None:intergenic 40.0%
AGAGTTGTCCTTATATGGCT+CGG + chr7_2:2065719-2065738 Msa1043900:intron 40.0%
! TCACCTCACGATCAATTTTG+TGG + chr7_2:2065749-2065768 Msa1043900:intron 40.0%
ACACCACAAAATTGATCGTG+AGG - chr7_2:2065755-2065774 None:intergenic 40.0%
! TCTGGAATGTGAACAAATGC+AGG - chr7_2:2065908-2065927 None:intergenic 40.0%
GATTTCAGCATGTCTCGAAT+TGG - chr7_2:2065934-2065953 None:intergenic 40.0%
TCGACTAGAGTCTAGAGATA+TGG + chr7_2:2065959-2065978 Msa1043900:intron 40.0%
ACAAATGCAATCGTAAGGTG+CGG - chr7_2:2066014-2066033 None:intergenic 40.0%
CACCTTACGATTGCATTTGT+GGG + chr7_2:2066014-2066033 Msa1043900:intron 40.0%
ACCTTACGATTGCATTTGTG+GGG + chr7_2:2066015-2066034 Msa1043900:intron 40.0%
GGAAGGGACACAAGTAAATA+TGG + chr7_2:2066147-2066166 Msa1043900:intron 40.0%
TCAAGGAATATGGAGAGAGA+GGG + chr7_2:2066275-2066294 Msa1043900:intron 40.0%
GGCAATGGTTGATCAATTGA+AGG + chr7_2:2066296-2066315 Msa1043900:intron 40.0%
ACTTCGGAATAGGATGATGA+CGG + chr7_2:2066355-2066374 Msa1043900:intron 40.0%
AGAATGAGATGCACCTGAAT+AGG + chr7_2:2066440-2066459 Msa1043900:intron 40.0%
ATACAACTATCTTGGGCTTG+AGG + chr7_2:2066535-2066554 Msa1043900:intron 40.0%
! ACTCCCATGTGGTTTGATTT+GGG + chr7_2:2066571-2066590 Msa1043900:intron 40.0%
!! TGGTTTGATTTGGGCCTTTA+GGG + chr7_2:2066580-2066599 Msa1043900:intron 40.0%
! CATCTATTCTGGACTAGATC+TGG - chr7_2:2066609-2066628 None:intergenic 40.0%
TCACGCTTACATCAAATTGG+GGG - chr7_2:2066632-2066651 None:intergenic 40.0%
TGCCATAACTTCAATGCTAG+TGG - chr7_2:2066682-2066701 None:intergenic 40.0%
AGCTTCAACTTGTGTGATGT+AGG - chr7_2:2066711-2066730 None:intergenic 40.0%
!!! TCTCATGCTTTTGAGGTAAG+GGG - chr7_2:2067027-2067046 None:intergenic 40.0%
!!! GTCTCATGCTTTTGAGGTAA+GGG - chr7_2:2067028-2067047 None:intergenic 40.0%
!!! TGTCTCATGCTTTTGAGGTA+AGG - chr7_2:2067029-2067048 None:intergenic 40.0%
! GATCTTGTCTCATGCTTTTG+AGG - chr7_2:2067034-2067053 None:intergenic 40.0%
GAGTTATCCAGTGGTCTATT+TGG - chr7_2:2067101-2067120 None:intergenic 40.0%
CACTGGATAACTCAACACAA+GGG + chr7_2:2067108-2067127 Msa1043900:intron 40.0%
ACTGGATAACTCAACACAAG+GGG + chr7_2:2067109-2067128 Msa1043900:intron 40.0%
TAGACCTTGAGTAACCTTGT+TGG + chr7_2:2067187-2067206 Msa1043900:intron 40.0%
AAGCAAGACTGGCATCTAAA+AGG - chr7_2:2067220-2067239 None:intergenic 40.0%
!! TGAGAGCATCTATTCTGAAC+TGG + chr7_2:2067269-2067288 Msa1043900:intron 40.0%
GACTCCCATATGGTTTGATT+TGG - chr7_2:2067314-2067333 None:intergenic 40.0%
TGGTGAATCTATGTTTGGGT+GGG - chr7_2:2067474-2067493 None:intergenic 40.0%
GACAGTGGTGAATCTATGTT+TGG - chr7_2:2067479-2067498 None:intergenic 40.0%
!! CACAGTGATGGATCAATGAA+AGG - chr7_2:2067535-2067554 None:intergenic 40.0%
GAGAGAGTAAATCACAGTGA+TGG - chr7_2:2067547-2067566 None:intergenic 40.0%
!! CCGTGTTACTGATTTGTGAA+AGG + chr7_2:2067718-2067737 Msa1043900:intron 40.0%
TGTTGAAATCCACACGCTAA+AGG - chr7_2:2068219-2068238 None:intergenic 40.0%
GAGTACAGCGATTATGAAAC+AGG - chr7_2:2068248-2068267 None:intergenic 40.0%
GTATCCACACAAACACCTTT+GGG + chr7_2:2068308-2068327 Msa1043900:intron 40.0%
! TTACTAGGAAAAGGCTTTGG+TGG - chr7_2:2068358-2068377 None:intergenic 40.0%
CACTTACTAGGAAAAGGCTT+TGG - chr7_2:2068361-2068380 None:intergenic 40.0%
CCCGTTAGCTAATAATGAGA+TGG + chr7_2:2068625-2068644 Msa1043900:intron 40.0%
! TTAAATTGGTTTCTGCGGGA+AGG + chr7_2:2069116-2069135 Msa1043900:CDS 40.0%
TTCGTGAGAAATGGTAGAGT+TGG - chr7_2:2069146-2069165 None:intergenic 40.0%
ATGAAGCTTGTGTGTTTGCA+TGG + chr7_2:2069243-2069262 Msa1043900:intron 40.0%
AGGGATGCTAGTAAAAGCTT+TGG + chr7_2:2069342-2069361 Msa1043900:intron 40.0%
CTGTATCTGATCTCATCTAG+CGG + chr7_2:2069491-2069510 Msa1043900:intron 40.0%
TGTATCTGATCTCATCTAGC+GGG + chr7_2:2069492-2069511 Msa1043900:intron 40.0%
CTGTGTATACATTTCTCCAG+AGG + chr7_2:2069626-2069645 Msa1043900:intron 40.0%
TGTATACATTTCTCCAGAGG+AGG + chr7_2:2069629-2069648 Msa1043900:intron 40.0%
TACAGATTATGACGGTTCTG+CGG + chr7_2:2069701-2069720 Msa1043900:CDS 40.0%
GTTTACTGTCCGTCAGAATT+TGG + chr7_2:2069831-2069850 Msa1043900:intron 40.0%
AGCACAAACATATGGAATGC+TGG + chr7_2:2069877-2069896 Msa1043900:intron 40.0%
TATAAAGGACCTGCTTGGAT+TGG + chr7_2:2069947-2069966 Msa1043900:intron 40.0%
GTAAATAAGCCAATCCAAGC+AGG - chr7_2:2069959-2069978 None:intergenic 40.0%
!! GCTTGGATTGGCTTATTTAC+TGG + chr7_2:2069959-2069978 Msa1043900:intron 40.0%
TAAGCACTTGTGCGAATGTT+TGG + chr7_2:2069984-2070003 Msa1043900:intron 40.0%
!!! ATTTTTTTTTGGTGGTGGCC+GGG + chr7_2:2070057-2070076 Msa1043900:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr7_2:2070090-2070109 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr7_2:2070091-2070110 None:intergenic 40.0%
TGAGCTTAGCTCAGTTTGTA+TGG - chr7_2:2070120-2070139 None:intergenic 40.0%
ATTGAGCTGTTTATCCAAGC+AGG + chr7_2:2070337-2070356 Msa1043900:intron 40.0%
! TTAAGCATTTTGGACCTGCT+TGG - chr7_2:2070354-2070373 None:intergenic 40.0%
! AAAAAAAAGCACGGTCGTGA+AGG - chr7_2:2070433-2070452 None:intergenic 40.0%
!!! TTAGTTTTGGTTTCTCTGCC+TGG - chr7_2:2070529-2070548 None:intergenic 40.0%
TTAAGGATAGGTATCCCGAA+TGG + chr7_2:2070552-2070571 Msa1043900:CDS 40.0%
ATAATAACCAGCACAGAAGG+CGG + chr7_2:2070646-2070665 Msa1043900:three_prime_UTR 40.0%
TAACACGAGCAATCTAAGTC+CGG + chr7_2:2070676-2070695 Msa1043900:three_prime_UTR 40.0%
TTAATGAGATGGGGGAGTAA+AGG + chr7_2:2070818-2070837 Msa1043900:three_prime_UTR 40.0%
!!! GTCAAAGTGCTATTTTCGAC+AGG + chr7_2:2070863-2070882 Msa1043900:three_prime_UTR 40.0%
CTCTGTTACACATGTAGTTG+GGG - chr7_2:2070950-2070969 None:intergenic 40.0%
AGATTCTTGGACGGTGTAAT+CGG + chr7_2:2070974-2070993 Msa1043900:three_prime_UTR 40.0%
TGTTGTTGTCTGAGAGTGGT+GGG - chr7_2:2063140-2063159 None:intergenic 45.0%
! TTGTTGTTGTCTGAGAGTGG+TGG - chr7_2:2063141-2063160 None:intergenic 45.0%
TGTGAATCGAAACGTGGGAT+TGG - chr7_2:2063206-2063225 None:intergenic 45.0%
!! AGAGGTGGGTTAAGGTTACT+GGG - chr7_2:2063239-2063258 None:intergenic 45.0%
!! TAGAGGTGGGTTAAGGTTAC+TGG - chr7_2:2063240-2063259 None:intergenic 45.0%
ACCCACCTCTAACAAATCCT+AGG + chr7_2:2063249-2063268 Msa1043900:five_prime_UTR 45.0%
ATGATGGCAAGAAGTGAGTG+GGG + chr7_2:2063414-2063433 Msa1043900:CDS 45.0%
CAACTTCAATCAAGAGGAGG+TGG + chr7_2:2063441-2063460 Msa1043900:CDS 45.0%
AATCAAGAGGAGGTGGAAAG+TGG + chr7_2:2063448-2063467 Msa1043900:CDS 45.0%
ATCAAGAGGAGGTGGAAAGT+GGG + chr7_2:2063449-2063468 Msa1043900:CDS 45.0%
!! GTTTTCAAGCCAAAGTACGG+AGG + chr7_2:2064022-2064041 Msa1043900:CDS 45.0%
CAACAAACGGGAATGTGAGA+TGG + chr7_2:2064281-2064300 Msa1043900:intron 45.0%
AAACGGGAATGTGAGATGGT+TGG + chr7_2:2064285-2064304 Msa1043900:intron 45.0%
GAATGTGAGATGGTTGGACT+TGG + chr7_2:2064291-2064310 Msa1043900:intron 45.0%
GTTGGATGTTTGGCAAGACA+CGG + chr7_2:2064492-2064511 Msa1043900:intron 45.0%
TTGGATGTTTGGCAAGACAC+GGG + chr7_2:2064493-2064512 Msa1043900:intron 45.0%
ACTAGAGGTAGAGGAAGACT+TGG + chr7_2:2064658-2064677 Msa1043900:intron 45.0%
TCAAATGTTCCGAGGGTCAA+TGG - chr7_2:2065076-2065095 None:intergenic 45.0%
TGGCCAGAGTTGTCCTTATA+TGG + chr7_2:2065714-2065733 Msa1043900:intron 45.0%
GAGCCATATAAGGACAACTC+TGG - chr7_2:2065720-2065739 None:intergenic 45.0%
GAGTTGTCCTTATATGGCTC+GGG + chr7_2:2065720-2065739 Msa1043900:intron 45.0%
ATGACTACCCGAGCCATATA+AGG - chr7_2:2065730-2065749 None:intergenic 45.0%
AGGATTGGACGTTCAGAACA+TGG - chr7_2:2065856-2065875 None:intergenic 45.0%
TGAACGTCCAATCCTAAGTG+TGG + chr7_2:2065861-2065880 Msa1043900:intron 45.0%
GAACGTCCAATCCTAAGTGT+GGG + chr7_2:2065862-2065881 Msa1043900:intron 45.0%
AACGTCCAATCCTAAGTGTG+GGG + chr7_2:2065863-2065882 Msa1043900:intron 45.0%
!! TGTGGGGAGGTGTTGTTATT+GGG + chr7_2:2065879-2065898 Msa1043900:intron 45.0%
CATGTCTCGAATTGGACATC+TGG - chr7_2:2065926-2065945 None:intergenic 45.0%
GCACCTTACGATTGCATTTG+TGG + chr7_2:2066013-2066032 Msa1043900:intron 45.0%
ACCCCACAAATGCAATCGTA+AGG - chr7_2:2066019-2066038 None:intergenic 45.0%
CTCAAGGAATATGGAGAGAG+AGG + chr7_2:2066274-2066293 Msa1043900:intron 45.0%
AATATGGAGAGAGAGGGCAA+TGG + chr7_2:2066281-2066300 Msa1043900:intron 45.0%
TGAAGGATGAAACTGCACGA+TGG + chr7_2:2066313-2066332 Msa1043900:intron 45.0%
GCTGTGAATCACTTCGGAAT+AGG + chr7_2:2066345-2066364 Msa1043900:intron 45.0%
ATGAGATGCACCTGAATAGG+AGG + chr7_2:2066443-2066462 Msa1043900:intron 45.0%
GACTCCCATGTGGTTTGATT+TGG + chr7_2:2066570-2066589 Msa1043900:intron 45.0%
AGGCCCAAATCAAACCACAT+GGG - chr7_2:2066577-2066596 None:intergenic 45.0%
AAGGCCCAAATCAAACCACA+TGG - chr7_2:2066578-2066597 None:intergenic 45.0%
!! GTGGTTTGATTTGGGCCTTT+AGG + chr7_2:2066579-2066598 Msa1043900:intron 45.0%
! ACTAGATCTGGAGTCCCTAA+AGG - chr7_2:2066597-2066616 None:intergenic 45.0%
!! CAAATTGGGGGCATCTATTC+TGG - chr7_2:2066620-2066639 None:intergenic 45.0%
CTGGCTCCAGTTTATCTCTA+AGG - chr7_2:2066837-2066856 None:intergenic 45.0%
TAGAGATAAACTGGAGCCAG+AGG + chr7_2:2066837-2066856 Msa1043900:intron 45.0%
CATCTGCTCACTCTCTGATT+GGG + chr7_2:2066949-2066968 Msa1043900:intron 45.0%
ACTCTCTGATTGGGACTTCT+TGG + chr7_2:2066958-2066977 Msa1043900:intron 45.0%
GCTTCTTTCGACCTTGCATT+TGG + chr7_2:2067059-2067078 Msa1043900:intron 45.0%
TCGACCTTGCATTTGGTATG+TGG + chr7_2:2067066-2067085 Msa1043900:intron 45.0%
CGACCTTGCATTTGGTATGT+GGG + chr7_2:2067067-2067086 Msa1043900:intron 45.0%
CATTTGGTATGTGGGTCCAA+CGG + chr7_2:2067075-2067094 Msa1043900:intron 45.0%
CCTTGTGTTGAGTTATCCAG+TGG - chr7_2:2067110-2067129 None:intergenic 45.0%
CCACTGGATAACTCAACACA+AGG + chr7_2:2067107-2067126 Msa1043900:intron 45.0%
ATAACTCAACACAAGGGGCA+AGG + chr7_2:2067114-2067133 Msa1043900:intron 45.0%
ACCTTGAGTAACCTTGTTGG+TGG + chr7_2:2067190-2067209 Msa1043900:intron 45.0%
TCCACCAACAAGGTTACTCA+AGG - chr7_2:2067194-2067213 None:intergenic 45.0%
AGCTGACTGATAAGCAAGAC+TGG - chr7_2:2067231-2067250 None:intergenic 45.0%
TTATCAGTCAGCTCTGCATC+AGG + chr7_2:2067238-2067257 Msa1043900:intron 45.0%
ACATTAGGAGGACTCCCATA+TGG - chr7_2:2067324-2067343 None:intergenic 45.0%
ATATGGGAGTCCTCCTAATG+TGG + chr7_2:2067323-2067342 Msa1043900:intron 45.0%
TATGGGAGTCCTCCTAATGT+GGG + chr7_2:2067324-2067343 Msa1043900:intron 45.0%
TTGGACTTGAGTCCCACATT+AGG - chr7_2:2067339-2067358 None:intergenic 45.0%
GACACGTTACATAGCAACCA+TGG + chr7_2:2067384-2067403 Msa1043900:intron 45.0%
GTGGTGAATCTATGTTTGGG+TGG - chr7_2:2067475-2067494 None:intergenic 45.0%
TGAGCATTTGGACAGTTGTG+AGG - chr7_2:2067698-2067717 None:intergenic 45.0%
TCAGTAACACGGTGAGCATT+TGG - chr7_2:2067710-2067729 None:intergenic 45.0%
CACGCTAAAGGAATTGTGTG+AGG - chr7_2:2068207-2068226 None:intergenic 45.0%
CACACAATTCCTTTAGCGTG+TGG + chr7_2:2068207-2068226 Msa1043900:intron 45.0%
GGTATCCACACAAACACCTT+TGG + chr7_2:2068307-2068326 Msa1043900:intron 45.0%
!! AACACCCAAAGGTGTTTGTG+TGG - chr7_2:2068315-2068334 None:intergenic 45.0%
GAGAGACACGCTATAATGCA+AGG + chr7_2:2068583-2068602 Msa1043900:intron 45.0%
CATTATTAGCTAACGGGGGT+TGG - chr7_2:2068622-2068641 None:intergenic 45.0%
TTTAATGTCACTCACGCGTG+TGG + chr7_2:2068910-2068929 Msa1043900:intron 45.0%
AGCAGTTGAAAATTGGCGCA+AGG + chr7_2:2069078-2069097 Msa1043900:CDS 45.0%
CTCTACCATTTCTCACGAAG+AGG + chr7_2:2069147-2069166 Msa1043900:CDS 45.0%
!! TTGCCGAAGAAATTGGCCTT+TGG + chr7_2:2069383-2069402 Msa1043900:CDS 45.0%
CAACCTCAACAGGTATCCAA+AGG - chr7_2:2069402-2069421 None:intergenic 45.0%
TCTACATTCGCAACCTCAAC+AGG - chr7_2:2069412-2069431 None:intergenic 45.0%
! TGAAGTTCAGGTTTGCACTC+AGG - chr7_2:2069681-2069700 None:intergenic 45.0%
! TGATTGCTGTCAAGCTTGCT+TGG + chr7_2:2069761-2069780 Msa1043900:CDS 45.0%
CTTCTTTGGCACGTTTAGCA+TGG - chr7_2:2069788-2069807 None:intergenic 45.0%
CATGCTAAACGTGCCAAAGA+AGG + chr7_2:2069786-2069805 Msa1043900:CDS 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG + chr7_2:2070058-2070077 Msa1043900:intron 45.0%
TGCACCAGTGATTGTTCCAT+GGG + chr7_2:2070595-2070614 Msa1043900:CDS 45.0%
!!! AAATTTTATATATAAACATT+GGG - chr7_2:2068846-2068865 None:intergenic 5.0%
!!! AAAATTTTATATATAAACAT+TGG - chr7_2:2068847-2068866 None:intergenic 5.0%
! GAGAGTGGTGGGATTTGGTT+TGG - chr7_2:2063129-2063148 None:intergenic 50.0%
! TGTCTGAGAGTGGTGGGATT+TGG - chr7_2:2063134-2063153 None:intergenic 50.0%
!! CGCTTGTTGTTGTCTGAGAG+TGG - chr7_2:2063144-2063163 None:intergenic 50.0%
CCTCGTGTGAATCGAAACGT+GGG - chr7_2:2063211-2063230 None:intergenic 50.0%
ACCTCGTGTGAATCGAAACG+TGG - chr7_2:2063212-2063231 None:intergenic 50.0%
TGATGGCAAGAAGTGAGTGG+GGG + chr7_2:2063415-2063434 Msa1043900:CDS 50.0%
GCAACTCAACCTCCGTACTT+TGG - chr7_2:2064034-2064053 None:intergenic 50.0%
!! TCACTCCCAAGGCATTGCTA+TGG + chr7_2:2064133-2064152 Msa1043900:CDS 50.0%
TCGCTCCATAGCAATGCCTT+GGG - chr7_2:2064141-2064160 None:intergenic 50.0%
ACTAAGTGGGATCGGCTACA+TGG - chr7_2:2064777-2064796 None:intergenic 50.0%
ATCGGTACGCAGCAGAAAAG+GGG - chr7_2:2065138-2065157 None:intergenic 50.0%
GATCGGTACGCAGCAGAAAA+GGG - chr7_2:2065139-2065158 None:intergenic 50.0%
! TGTAGCCGTTACTTGTTGGG+TGG + chr7_2:2065238-2065257 Msa1043900:intron 50.0%
AACAACACCTCCCCACACTT+AGG - chr7_2:2065876-2065895 None:intergenic 50.0%
!! GTGTGGGGAGGTGTTGTTAT+TGG + chr7_2:2065878-2065897 Msa1043900:intron 50.0%
!! TCGGAATAGGATGATGACGG+TGG + chr7_2:2066358-2066377 Msa1043900:intron 50.0%
GCATCTGCTCACTCTCTGAT+TGG + chr7_2:2066948-2066967 Msa1043900:intron 50.0%
CTCTGATTGGGACTTCTTGG+TGG + chr7_2:2066961-2066980 Msa1043900:intron 50.0%
GGACCCACATACCAAATGCA+AGG - chr7_2:2067073-2067092 None:intergenic 50.0%
GACTTGAGTCCCACATTAGG+AGG - chr7_2:2067336-2067355 None:intergenic 50.0%
GTGATGAATCACTTCGGCAG+AGG - chr7_2:2067504-2067523 None:intergenic 50.0%
ATGAAAGATGGGAGGGGGTT+TGG + chr7_2:2068000-2068019 Msa1043900:intron 50.0%
TATTAGCTAACGGGGGTTGG+TGG - chr7_2:2068619-2068638 None:intergenic 50.0%
GAGGGTTCAAAGTTGGGCAT+TGG + chr7_2:2068754-2068773 Msa1043900:intron 50.0%
ACCATTTCTCACGAAGAGGC+AGG + chr7_2:2069151-2069170 Msa1043900:CDS 50.0%
ACCTGCCTCTTCGTGAGAAA+TGG - chr7_2:2069155-2069174 None:intergenic 50.0%
TTCTCACGAAGAGGCAGGTA+TGG + chr7_2:2069156-2069175 Msa1043900:intron 50.0%
GAAGAGGCAGGTATGGAGTA+TGG + chr7_2:2069163-2069182 Msa1043900:intron 50.0%
GCTGTGCTTGCCGAAGAAAT+TGG + chr7_2:2069376-2069395 Msa1043900:CDS 50.0%
TGGCCTTTGGATACCTGTTG+AGG + chr7_2:2069396-2069415 Msa1043900:CDS 50.0%
! TGACAAACCTGATGGTGCAG+AGG + chr7_2:2069438-2069457 Msa1043900:CDS 50.0%
CCTAAATCCTCTGCACCATC+AGG - chr7_2:2069448-2069467 None:intergenic 50.0%
! CCTGATGGTGCAGAGGATTT+AGG + chr7_2:2069445-2069464 Msa1043900:CDS 50.0%
AGGTTTGCACTCAGGTGGAA+GGG - chr7_2:2069673-2069692 None:intergenic 50.0%
! AGTTCAGGTTTGCACTCAGG+TGG - chr7_2:2069678-2069697 None:intergenic 50.0%
ATGACGGTTCTGCGGTTAGA+TGG + chr7_2:2069709-2069728 Msa1043900:CDS 50.0%
TGACGGTTCTGCGGTTAGAT+GGG + chr7_2:2069710-2069729 Msa1043900:CDS 50.0%
CAAACTGAGCTAAGCTCACG+AGG + chr7_2:2070122-2070141 Msa1043900:intron 50.0%
GGAACAATCACTGGTGCAGA+TGG - chr7_2:2070593-2070612 None:intergenic 50.0%
CTGCACCAGTGATTGTTCCA+TGG + chr7_2:2070594-2070613 Msa1043900:CDS 50.0%
TCAAGCAGCAACAACTCCAG+AGG - chr7_2:2070621-2070640 None:intergenic 50.0%
! CAGGCACTCAAAGCTAGCTT+TGG + chr7_2:2070719-2070738 Msa1043900:three_prime_UTR 50.0%
TTCTTGGACGGTGTAATCGG+AGG + chr7_2:2070977-2070996 Msa1043900:three_prime_UTR 50.0%
CCCACGTTTCGATTCACACG+AGG + chr7_2:2063208-2063227 Msa1043900:five_prime_UTR 55.0%
CTCGCTCCATAGCAATGCCT+TGG - chr7_2:2064142-2064161 None:intergenic 55.0%
!! CAAGGCATTGCTATGGAGCG+AGG + chr7_2:2064140-2064159 Msa1043900:CDS 55.0%
GGATCGGTACGCAGCAGAAA+AGG - chr7_2:2065140-2065159 None:intergenic 55.0%
GTCCAATCCTAAGTGTGGGG+AGG + chr7_2:2065866-2065885 Msa1043900:intron 55.0%
CACCTCCCCACACTTAGGAT+TGG - chr7_2:2065871-2065890 None:intergenic 55.0%
ACATGGGAGTCCCCTAGTGT+GGG - chr7_2:2066561-2066580 None:intergenic 55.0%
CCAGTGGTCTATTTGGCCGT+TGG - chr7_2:2067094-2067113 None:intergenic 55.0%
CCAACGGCCAAATAGACCAC+TGG + chr7_2:2067091-2067110 Msa1043900:intron 55.0%
ACTTCGGCAGAGGAAGACAG+TGG - chr7_2:2067494-2067513 None:intergenic 55.0%
GTCCAGTCGAAGCTTCCATC+TGG + chr7_2:2068065-2068084 Msa1043900:intron 55.0%
GTCCAGATGGAAGCTTCGAC+TGG - chr7_2:2068070-2068089 None:intergenic 55.0%
CCTGGAAGAACTTCCTCCTC+TGG - chr7_2:2069645-2069664 None:intergenic 55.0%
CCAGAGGAGGAAGTTCTTCC+AGG + chr7_2:2069642-2069661 Msa1043900:intron 55.0%
AGGAGGAAGTTCTTCCAGGC+AGG + chr7_2:2069646-2069665 Msa1043900:CDS 55.0%
GGAGGAAGTTCTTCCAGGCA+GGG + chr7_2:2069647-2069666 Msa1043900:CDS 55.0%
CAGGTTTGCACTCAGGTGGA+AGG - chr7_2:2069674-2069693 None:intergenic 55.0%
GACGGTTCTGCGGTTAGATG+GGG + chr7_2:2069711-2069730 Msa1043900:CDS 55.0%
GAGGCCCATGGAACAATCAC+TGG - chr7_2:2070602-2070621 None:intergenic 55.0%
GTGATTGTTCCATGGGCCTC+TGG + chr7_2:2070602-2070621 Msa1043900:CDS 55.0%
AACCAGCACAGAAGGCGGTA+TGG + chr7_2:2070651-2070670 Msa1043900:three_prime_UTR 55.0%
TACCATACCGCCTTCTGTGC+TGG - chr7_2:2070656-2070675 None:intergenic 55.0%
TTGGGCTTGAGGCCCACACT+AGG + chr7_2:2066546-2066565 Msa1043900:intron 60.0%
TGGGCTTGAGGCCCACACTA+GGG + chr7_2:2066547-2066566 Msa1043900:intron 60.0%
CACATGGGAGTCCCCTAGTG+TGG - chr7_2:2066562-2066581 None:intergenic 60.0%
CACACTAGGGGACTCCCATG+TGG + chr7_2:2066560-2066579 Msa1043900:intron 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - chr7_2:2070078-2070097 None:intergenic 60.0%
GCAACAACTCCAGAGGCCCA+TGG - chr7_2:2070614-2070633 None:intergenic 60.0%
GGGCTTGAGGCCCACACTAG+GGG + chr7_2:2066548-2066567 Msa1043900:intron 65.0%
TCAGGTGGAAGGGCCCTGCC+TGG - chr7_2:2069663-2069682 None:intergenic 70.0%
GGTGGCCGGGGTTTGAACCC+CGG + chr7_2:2070070-2070089 Msa1043900:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 2063094 2071162 2063094 ID=Msa1043900;Name=Msa1043900
chr7_2 mRNA 2063094 2071162 2063094 ID=Msa1043900-mRNA-1;Parent=Msa1043900;Name=Msa1043900-mRNA-1;_AED=0.12;_eAED=0.12;_QI=320|0.83|0.85|1|1|1|7|522|313
chr7_2 exon 2063094 2063591 2063094 ID=Msa1043900-mRNA-1:exon:436;Parent=Msa1043900-mRNA-1
chr7_2 exon 2063825 2063913 2063825 ID=Msa1043900-mRNA-1:exon:437;Parent=Msa1043900-mRNA-1
chr7_2 exon 2064002 2064161 2064002 ID=Msa1043900-mRNA-1:exon:438;Parent=Msa1043900-mRNA-1
chr7_2 exon 2069077 2069172 2069077 ID=Msa1043900-mRNA-1:exon:439;Parent=Msa1043900-mRNA-1
chr7_2 exon 2069344 2069466 2069344 ID=Msa1043900-mRNA-1:exon:440;Parent=Msa1043900-mRNA-1
chr7_2 exon 2069646 2069830 2069646 ID=Msa1043900-mRNA-1:exon:441;Parent=Msa1043900-mRNA-1
chr7_2 exon 2070530 2071162 2070530 ID=Msa1043900-mRNA-1:exon:442;Parent=Msa1043900-mRNA-1
chr7_2 five_prime_UTR 2063094 2063413 2063094 ID=Msa1043900-mRNA-1:five_prime_utr;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2063414 2063591 2063414 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2063825 2063913 2063825 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2064002 2064161 2064002 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2069077 2069172 2069077 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2069344 2069466 2069344 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2069646 2069830 2069646 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 CDS 2070530 2070640 2070530 ID=Msa1043900-mRNA-1:cds;Parent=Msa1043900-mRNA-1
chr7_2 three_prime_UTR 2070641 2071162 2070641 ID=Msa1043900-mRNA-1:three_prime_utr;Parent=Msa1043900-mRNA-1
Gene Sequence

>Msa1043900

ATGATGGCAAGAAGTGAGTGGGGGATTCAACTTCAATCAAGAGGAGGTGGAAAGTGGGTTTGTTCTTACAAAAAAATCACTATCTTAGTTTGTCTTTTCAACATTGCTATTGCTCTCTATTGTCTTCGTTCTCTTTATGCTTCTCTTTATATCTACTCTGGTAGTGTTTCAAGAAACATTGTGGTGTATAAACCAGATCAGATTCGGAAAATGGAAGAATCGAATCAAATTAGGAAGTCATACAAACCGGTGAAGTTAATGAAATTGGTGAAGGAATTAGAAGGGGAGTTTTCAAGCCAAAGTACGGAGGTTGAGTTGCCTCAGCACTTGAAACAGAAGATAATTGATGAGGTCTTGCAGAGACTAGTTAGTTTGAATAGCAGAAGCAATAATGGATCTCACTCCCAAGGCATTGCTATGGAGCGAGAAGCAGTTGAAAATTGGCGCAAGGAAAAATTGGAAGAAGTTAAATTGGTTTCTGCGGGAAGGATTTCCAACTCTACCATTTCTCACGAAGAGGCAGGGATGCTAGTAAAAGCTTTGGAGTCTGATTGGGCTGTGCTTGCCGAAGAAATTGGCCTTTGGATACCTGTTGAGGTTGCGAATGTAGAACATAATGACAAACCTGATGGTGCAGAGGATTTAGAGGAGGAAGTTCTTCCAGGCAGGGCCCTTCCACCTGAGTGCAAACCTGAACTTCATACAGATTATGACGGTTCTGCGGTTAGATGGGGTCTTACTCACCATAAAGATAGTGCAGCTGATTGCTGTCAAGCTTGCTTGGACCATGCTAAACGTGCCAAAGAAGGTGAAAAAAAATGCAATATTTGGGCAGAGAAACCAAAACTAAATTTTAAGGATAGGTATCCCGAATGGTATCGAAATTCACATCCATCTGCACCAGTGATTGTTCCATGGGCCTCTGGAGTTGTTGCTGCTTGA
Protein sequence

>Msa1043900

MMARSEWGIQLQSRGGGKWVCSYKKITILVCLFNIAIALYCLRSLYASLYIYSGSVSRNIVVYKPDQIRKMEESNQIRKSYKPVKLMKLVKELEGEFSSQSTEVELPQHLKQKIIDEVLQRLVSLNSRSNNGSHSQGIAMEREAVENWRKEKLEEVKLVSAGRISNSTISHEEAGMLVKALESDWAVLAEEIGLWIPVEVANVEHNDKPDGAEDLEEEVLPGRALPPECKPELHTDYDGSAVRWGLTHHKDSAADCCQACLDHAKRAKEGEKKCNIWAEKPKLNFKDRYPEWYRNSHPSAPVIVPWASGVVAA*