Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044710 | XP_003622992.1 | 90.844 | 841 | 34 | 2 | 1 | 838 | 1 | 801 | 0.0 | 1529 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044710 | sp|Q9STU3|MAG2_ARATH | 54.245 | 848 | 324 | 11 | 1 | 837 | 1 | 795 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044710 | G7L2C9 | 90.844 | 841 | 34 | 2 | 1 | 838 | 1 | 801 | 0.0 | 1529 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1044710 | Msa1105650 | 0.953888 | 1.013968e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044710 | MtrunA17_Chr7g0237791 | 90.844 | 841 | 34 | 2 | 1 | 838 | 1 | 801 | 0.0 | 1529 |
| Msa1044710 | MtrunA17_Chr3g0093581 | 33.333 | 885 | 472 | 16 | 1 | 834 | 13 | 830 | 7.64e-136 | 424 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044710 | AT3G47700.1 | 54.245 | 848 | 324 | 11 | 1 | 837 | 1 | 795 | 0.0 | 871 |
| Msa1044710 | AT1G08400.1 | 32.201 | 854 | 488 | 15 | 7 | 833 | 14 | 803 | 1.34e-128 | 405 |
Find 198 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAAAAGCATTTCTCAAAA+TGG | 0.144458 | 7_2:+3354301 | Msa1044710:CDS |
| TAAGACCTTCATTTGTATTA+AGG | 0.197551 | 7_2:-3355616 | None:intergenic |
| TTGAAGCTCGGCGACGAAAT+TGG | 0.205562 | 7_2:-3351945 | None:intergenic |
| ATGTCTTTGGTAGAAAATTC+TGG | 0.217841 | 7_2:+3354618 | Msa1044710:CDS |
| GGCGGAGCTAGAAAATATTT+TGG | 0.220346 | 7_2:+3355812 | Msa1044710:three_prime_UTR |
| AAATTTGCACATGAAATAAT+TGG | 0.241174 | 7_2:-3355870 | None:intergenic |
| CAGTCAACCCTTCAGCTTCT+TGG | 0.272422 | 7_2:-3354998 | None:intergenic |
| TGTCTGGTTTCAACTTATCT+AGG | 0.286651 | 7_2:-3354752 | None:intergenic |
| CATTCTTCTGACAAGAATTC+AGG | 0.295124 | 7_2:+3353768 | Msa1044710:CDS |
| TTTAATTAAAGCATCATTAT+CGG | 0.305405 | 7_2:-3355027 | None:intergenic |
| CTATCCCTGTTTGTATTACT+TGG | 0.308601 | 7_2:-3355161 | None:intergenic |
| CGAAAAGCATTTCTCAAAAT+GGG | 0.325990 | 7_2:+3354302 | Msa1044710:CDS |
| ATCGTCAAAGATAACTCTAT+TGG | 0.327826 | 7_2:-3355204 | None:intergenic |
| GACAACTTGTGGGCCATGAT+AGG | 0.329762 | 7_2:+3354214 | Msa1044710:CDS |
| AATCGCCTGGGGTCTTAAAA+TGG | 0.333547 | 7_2:-3354004 | None:intergenic |
| TGAAGCTCGGCGACGAAATT+GGG | 0.334907 | 7_2:-3351944 | None:intergenic |
| GGATTATCTGCAAGGTAAAA+TGG | 0.340226 | 7_2:+3355391 | Msa1044710:CDS |
| CGGGCACTTCTATCTTCGTT+TGG | 0.346740 | 7_2:+3354036 | Msa1044710:CDS |
| TTTGACCGCAAAGTAACATT+AGG | 0.355274 | 7_2:-3354912 | None:intergenic |
| CCCGATGGTCAGCAATCGCC+TGG | 0.358363 | 7_2:-3354017 | None:intergenic |
| CGTCTGTTGTTGAACGTTGT+CGG | 0.366079 | 7_2:+3354883 | Msa1044710:CDS |
| TAGAAGAAGGTTTGAATAGC+AGG | 0.370069 | 7_2:+3355420 | Msa1044710:CDS |
| CTTTGCCAAGTATGTGGATA+AGG | 0.373427 | 7_2:-3354475 | None:intergenic |
| TCAAAATTTCTCAGATTAGT+AGG | 0.373897 | 7_2:+3354930 | Msa1044710:CDS |
| CACTTCTATCTTCGTTTGGA+TGG | 0.375462 | 7_2:+3354040 | Msa1044710:CDS |
| ACATTGAAAACGAGAATAAC+TGG | 0.376272 | 7_2:+3354772 | Msa1044710:CDS |
| GCCCAAACTAGGACCTGCTT+TGG | 0.385286 | 7_2:+3351702 | None:intergenic |
| TGCCCTACGACAACCACTTT+GGG | 0.392932 | 7_2:+3354242 | Msa1044710:CDS |
| TAGAGAGGAACTTGCGACTT+TGG | 0.402074 | 7_2:+3352265 | Msa1044710:CDS |
| TGTTGGGGTTTGGAGAAGTT+TGG | 0.403098 | 7_2:+3355448 | Msa1044710:CDS |
| AAAGTAATGAGCGGCATTGA+TGG | 0.404107 | 7_2:-3355060 | None:intergenic |
| AATGGTGGTGTTGAAAGATT+TGG | 0.410942 | 7_2:+3355530 | Msa1044710:CDS |
| GCCCACAAATCAAGCCAATC+TGG | 0.413204 | 7_2:-3354708 | None:intergenic |
| TGTCTTTGGTAGAAAATTCT+GGG | 0.413222 | 7_2:+3354619 | Msa1044710:CDS |
| GTTGATGAAGCTAAGGTAGT+TGG | 0.414502 | 7_2:+3354411 | Msa1044710:CDS |
| TATTTGGGGTATTTGGGGCA+TGG | 0.416271 | 7_2:+3355570 | Msa1044710:CDS |
| GTCCAGATTGGCTTGATTTG+TGG | 0.416771 | 7_2:+3354706 | Msa1044710:CDS |
| AAGAGATGGTTGAAGGAGAA+TGG | 0.419195 | 7_2:+3355689 | Msa1044710:CDS |
| GAAATAATTGGTCACTTGAA+TGG | 0.420666 | 7_2:-3355858 | None:intergenic |
| GTTCAACAACAGACGCTAGA+TGG | 0.420678 | 7_2:-3354875 | None:intergenic |
| TCGGTGAATTTCGATCTTGA+TGG | 0.421407 | 7_2:-3351820 | None:intergenic |
| TAAGACTCTAATAGAGGCCT+TGG | 0.421585 | 7_2:+3355370 | Msa1044710:CDS |
| GTGATTGAAGATGGAGGAGG+AGG | 0.422219 | 7_2:+3352221 | Msa1044710:intron |
| TTGCTGAGATCCATTCTTCT+CGG | 0.422438 | 7_2:-3354443 | None:intergenic |
| CTATCTGATACTTGCTCCTC+CGG | 0.424017 | 7_2:+3352100 | Msa1044710:CDS |
| CTAGAAGAGGAGAGTGCTAC+AGG | 0.427850 | 7_2:+3354525 | Msa1044710:CDS |
| TTCGTACCATACAACATTGC+CGG | 0.428350 | 7_2:-3352506 | None:intergenic |
| TCCAGATTGGCTTGATTTGT+GGG | 0.429751 | 7_2:+3354707 | Msa1044710:CDS |
| TCTTGCTTTGTGCAACCTAC+AGG | 0.433316 | 7_2:+3354167 | Msa1044710:CDS |
| GCTTGTGAATCCCCTATCAT+TGG | 0.433407 | 7_2:+3354275 | Msa1044710:CDS |
| GCCGGAAAACGAAGCGTACT+TGG | 0.434086 | 7_2:-3352032 | None:intergenic |
| AATTACCAAGTAATACAAAC+AGG | 0.442160 | 7_2:+3355156 | Msa1044710:CDS |
| TTGCCCTACGACAACCACTT+TGG | 0.449787 | 7_2:+3354241 | Msa1044710:CDS |
| GGAAGAGTTTAGAACAGAGT+GGG | 0.454650 | 7_2:+3355241 | Msa1044710:CDS |
| AGAGATGGTTGAAGGAGAAT+GGG | 0.458128 | 7_2:+3355690 | Msa1044710:CDS |
| GAGGAGGAGGAGAACGAGAT+GGG | 0.462087 | 7_2:+3352234 | Msa1044710:CDS |
| CTAGAGCTCGATCTACTCTA+TGG | 0.465212 | 7_2:-3353981 | None:intergenic |
| GGCGAAGGAAGTTGCTAGGT+TGG | 0.466181 | 7_2:+3352286 | Msa1044710:CDS |
| GATATAGTTGCCGAGAAGAA+TGG | 0.466745 | 7_2:+3354433 | Msa1044710:CDS |
| GAGAAGATGGTGGCAGTGGT+TGG | 0.477115 | 7_2:-3351853 | None:intergenic |
| AATTTCCTTTGCCAAGTATG+TGG | 0.478566 | 7_2:-3354481 | None:intergenic |
| CCAGGCGATTGCTGACCATC+GGG | 0.479923 | 7_2:+3354017 | Msa1044710:CDS |
| GAGACTGTTCGTGTTTATGC+AGG | 0.480117 | 7_2:+3352308 | Msa1044710:CDS |
| ATACAAGATTCTTCCATTGA+GGG | 0.485028 | 7_2:-3353948 | None:intergenic |
| TTCTTGGCAACGGACTAGTA+TGG | 0.488514 | 7_2:-3354982 | None:intergenic |
| AGGTCTTAAATTGTTGAAGA+TGG | 0.489331 | 7_2:+3355631 | Msa1044710:CDS |
| ATTCAAACCTTGCACAATGC+CGG | 0.492109 | 7_2:-3352119 | None:intergenic |
| TACAGGAGTTGCAAAGGAAA+AGG | 0.495284 | 7_2:+3354184 | Msa1044710:CDS |
| TGCTCCTCCGGCATTGTGCA+AGG | 0.497475 | 7_2:+3352112 | Msa1044710:CDS |
| CCCAGGCGATTGCTGACCAT+CGG | 0.500211 | 7_2:+3354016 | Msa1044710:CDS |
| TTACAAATATACACCCTCAA+TGG | 0.500452 | 7_2:+3353935 | Msa1044710:CDS |
| GGAGGAGAACGAGATGGGAA+AGG | 0.501978 | 7_2:+3352239 | Msa1044710:CDS |
| ACCCTTCAGCTTCTTGGCAA+CGG | 0.502614 | 7_2:-3354992 | None:intergenic |
| GGAGGAGGAGGAGAACGAGA+TGG | 0.503496 | 7_2:+3352233 | Msa1044710:CDS |
| TCTAGTTGAGTAATATAACT+AGG | 0.505368 | 7_2:-3354507 | None:intergenic |
| TCAAACTCAGTGCTCTGAGT+TGG | 0.506088 | 7_2:+3351964 | Msa1044710:CDS |
| GAGGAAGGAGAGTGCGGAGT+GGG | 0.507496 | 7_2:-3351882 | None:intergenic |
| CATTGCCTAATGTTACTTTG+CGG | 0.507993 | 7_2:+3354907 | Msa1044710:CDS |
| ATGTTAAAGCAGAAAGAGGT+GGG | 0.508260 | 7_2:-3354065 | None:intergenic |
| GATACAAGATTCTTCCATTG+AGG | 0.508563 | 7_2:-3353949 | None:intergenic |
| AGAGTGCAAGAATGTATGAC+AGG | 0.512178 | 7_2:+3355662 | Msa1044710:CDS |
| GGCAAAAGAGTGAAGAAGGT+TGG | 0.513621 | 7_2:+3355339 | Msa1044710:CDS |
| AGAAGAAGGTTTGAATAGCA+GGG | 0.514841 | 7_2:+3355421 | Msa1044710:CDS |
| GTCTGGTTTCAACTTATCTA+GGG | 0.515344 | 7_2:-3354751 | None:intergenic |
| GTTAGACCGGCAATGTTGTA+TGG | 0.515419 | 7_2:+3352500 | Msa1044710:CDS |
| AGTGGTTGGAGGCGGTTCAT+CGG | 0.516184 | 7_2:-3351839 | None:intergenic |
| TGTTGTATGGTACGAAGTGT+TGG | 0.516238 | 7_2:+3352513 | Msa1044710:CDS |
| ATAACTCTATTGGAACTCTC+TGG | 0.516382 | 7_2:-3355194 | None:intergenic |
| TGACGATGAAATCAAACAGT+TGG | 0.517533 | 7_2:+3355220 | Msa1044710:CDS |
| AGATGAGAAGATGGTGGCAG+TGG | 0.519610 | 7_2:-3351857 | None:intergenic |
| ACAACTTGTGGGCCATGATA+GGG | 0.522346 | 7_2:+3354215 | Msa1044710:CDS |
| CGGAGGAGCAAGTATCAGAT+AGG | 0.523459 | 7_2:-3352099 | None:intergenic |
| AAGGAAATCTAGACAACTTG+TGG | 0.524555 | 7_2:+3354203 | Msa1044710:CDS |
| GCCATTGGTTGATGAAGCTA+AGG | 0.532397 | 7_2:+3354404 | Msa1044710:CDS |
| CTTTGGCGAAGGAAGTTGCT+AGG | 0.533591 | 7_2:+3352282 | Msa1044710:CDS |
| GGATGAAATGTTACAGCCAT+TGG | 0.534713 | 7_2:+3354389 | Msa1044710:CDS |
| CAATGGCAAAAGAGTGAAGA+AGG | 0.536128 | 7_2:+3355335 | Msa1044710:CDS |
| AACCTCCTTATCCACATACT+TGG | 0.537532 | 7_2:+3354470 | Msa1044710:CDS |
| CACTTGTGTATAAGATCACA+AGG | 0.541663 | 7_2:+3354349 | Msa1044710:CDS |
| AAAATGGCAGTGGTAGAAGA+AGG | 0.544752 | 7_2:+3355407 | Msa1044710:CDS |
| GTGGAAGTTGTGGTCGAGGA+AGG | 0.545615 | 7_2:-3351897 | None:intergenic |
| TGGAAGAGTTTAGAACAGAG+TGG | 0.546053 | 7_2:+3355240 | Msa1044710:CDS |
| TGTTTGGGTTGATCCAAAGC+AGG | 0.546104 | 7_2:-3351715 | None:intergenic |
| ATTGGGAGACTCGGTGAGGA+CGG | 0.546342 | 7_2:-3351927 | None:intergenic |
| GCATGGTGTTTGAGACCAGA+AGG | 0.546622 | 7_2:+3355587 | Msa1044710:CDS |
| CTAGTTGAGTAATATAACTA+GGG | 0.547904 | 7_2:-3354506 | None:intergenic |
| TGAGTACCTGAGCTTATGAT+CGG | 0.548327 | 7_2:-3354136 | None:intergenic |
| AGCACTGAAACTTGATACAT+TGG | 0.548488 | 7_2:+3353689 | Msa1044710:CDS |
| AAGATGGTGGCAGTGGTTGG+AGG | 0.548930 | 7_2:-3351850 | None:intergenic |
| ATGGTGGCAGTGGTTGGAGG+CGG | 0.549716 | 7_2:-3351847 | None:intergenic |
| AACGAAAACCACTTCATCGC+CGG | 0.550143 | 7_2:+3351737 | Msa1044710:five_prime_UTR |
| GTAGGGCAATCTCCCTATCA+TGG | 0.551255 | 7_2:-3354227 | None:intergenic |
| TGCCCAAAGTGGTTGTCGTA+GGG | 0.552626 | 7_2:-3354244 | None:intergenic |
| AGTCAGCTTCTAGAATATCA+TGG | 0.553240 | 7_2:+3354553 | Msa1044710:CDS |
| GACTCATCTTCCTCCTACAC+TGG | 0.554036 | 7_2:+3351761 | Msa1044710:five_prime_UTR |
| AGCTCTTCAATTGCCCAAAG+TGG | 0.554177 | 7_2:-3354255 | None:intergenic |
| GAGTGGGAGAGATGAGAAGA+TGG | 0.557357 | 7_2:-3351866 | None:intergenic |
| TTATATTACTCAACTAGAAG+AGG | 0.559261 | 7_2:+3354512 | Msa1044710:CDS |
| ATGAGTCTCCGGCGATGAAG+TGG | 0.560794 | 7_2:-3351745 | None:intergenic |
| TGGGAGAGATGAGAAGATGG+TGG | 0.561778 | 7_2:-3351863 | None:intergenic |
| AGACTCGGTGAGGACGGTTG+CGG | 0.564000 | 7_2:-3351921 | None:intergenic |
| CGGAGATGAGGATGATGCGT+TGG | 0.564026 | 7_2:+3352573 | Msa1044710:CDS |
| GTTTGGAGAAGTTTGGCCGC+AGG | 0.564600 | 7_2:+3355455 | Msa1044710:CDS |
| CGATAGGACAACAGTTAGAC+CGG | 0.565397 | 7_2:+3352487 | Msa1044710:CDS |
| TTTACCTTGCAGATAATCCA+AGG | 0.565920 | 7_2:-3355387 | None:intergenic |
| GTAGGAGGAAGATGAGTCTC+CGG | 0.566841 | 7_2:-3351756 | None:intergenic |
| GTTTGGCCGCAGGAATAGAT+CGG | 0.566954 | 7_2:+3355465 | Msa1044710:CDS |
| CGGTGTGGAAGTTGTGGTCG+AGG | 0.567563 | 7_2:-3351901 | None:intergenic |
| GGAACTTGCGACTTTGGCGA+AGG | 0.569345 | 7_2:+3352271 | Msa1044710:CDS |
| AGGATGATGCGTTGGATGAG+TGG | 0.569707 | 7_2:+3352581 | Msa1044710:CDS |
| TTGCCCAAAGTGGTTGTCGT+AGG | 0.570072 | 7_2:-3354245 | None:intergenic |
| GATGACTTGACTCGGAGACT+CGG | 0.575782 | 7_2:+3351998 | Msa1044710:CDS |
| TCGATCTTGATGGTTGCAGA+AGG | 0.576173 | 7_2:-3351810 | None:intergenic |
| GAGGATGTTAAAGCAGAAAG+AGG | 0.576740 | 7_2:-3354069 | None:intergenic |
| TGCACGCCGATCATAAGCTC+AGG | 0.581754 | 7_2:+3354130 | Msa1044710:CDS |
| GTTGTATGGTACGAAGTGTT+GGG | 0.583630 | 7_2:+3352514 | Msa1044710:CDS |
| TTATTTATGAAGCATTCGAT+AGG | 0.583656 | 7_2:+3352471 | Msa1044710:intron |
| GTCCGTTGCCAAGAAGCTGA+AGG | 0.583857 | 7_2:+3354990 | Msa1044710:CDS |
| GATGTTAAAGCAGAAAGAGG+TGG | 0.589340 | 7_2:-3354066 | None:intergenic |
| CGGTGAGGACGGTTGCGGTG+TGG | 0.593025 | 7_2:-3351916 | None:intergenic |
| TGTGCGGTGTTCGCCAGTGT+AGG | 0.593724 | 7_2:-3351774 | None:intergenic |
| GTTAAAGCAGAAAGAGGTGG+GGG | 0.596451 | 7_2:-3354063 | None:intergenic |
| GCGGTGTTCGCCAGTGTAGG+AGG | 0.600048 | 7_2:-3351771 | None:intergenic |
| GGCGACGAAATTGGGAGACT+CGG | 0.601597 | 7_2:-3351936 | None:intergenic |
| TTGTGGGCAGAAATAGAGCT+AGG | 0.601692 | 7_2:+3354723 | Msa1044710:CDS |
| CGGTTGCGGTGTGGAAGTTG+TGG | 0.602205 | 7_2:-3351907 | None:intergenic |
| TGAATTTGACACCATCGAAG+AGG | 0.602211 | 7_2:-3352066 | None:intergenic |
| AGGAAATCTAGACAACTTGT+GGG | 0.602912 | 7_2:+3354204 | Msa1044710:CDS |
| TCTGCAAGGTAAAATGGCAG+TGG | 0.603888 | 7_2:+3355397 | Msa1044710:CDS |
| TTGACTCGGAGACTCGGTGC+GGG | 0.603915 | 7_2:+3352004 | Msa1044710:CDS |
| AAGTAAGCGTAGCGGAGATG+AGG | 0.604019 | 7_2:+3352561 | Msa1044710:CDS |
| CTGAAACTTGATACATTGGT+TGG | 0.605977 | 7_2:+3353693 | Msa1044710:CDS |
| TGAAAGATTTGGTAATGACC+TGG | 0.606688 | 7_2:+3355541 | Msa1044710:CDS |
| TCCGTTGCCAAGAAGCTGAA+GGG | 0.607810 | 7_2:+3354991 | Msa1044710:CDS |
| CTTATCCACATACTTGGCAA+AGG | 0.607937 | 7_2:+3354476 | Msa1044710:CDS |
| ATACCCCAAATAAAACATCC+AGG | 0.608098 | 7_2:-3355559 | None:intergenic |
| GAAGAGGCTATGAATTTCGC+CGG | 0.609775 | 7_2:-3352050 | None:intergenic |
| GGTGGACGAGGAAGACAAAG+TGG | 0.613092 | 7_2:+3355133 | Msa1044710:CDS |
| TGCCAAGTATGTGGATAAGG+AGG | 0.616081 | 7_2:-3354472 | None:intergenic |
| AGATGCTGTATCGTATACCA+TGG | 0.616542 | 7_2:+3353725 | Msa1044710:CDS |
| AGTGTCTAAGACTCTAATAG+AGG | 0.621244 | 7_2:+3355364 | Msa1044710:CDS |
| GAGGCCTTGGATTATCTGCA+AGG | 0.622045 | 7_2:+3355383 | Msa1044710:CDS |
| ACCTTAGCTTCATCAACCAA+TGG | 0.622207 | 7_2:-3354405 | None:intergenic |
| TCGGCGTGCATGCTTTGTAG+AGG | 0.622806 | 7_2:-3354117 | None:intergenic |
| TAGATGGCGAACAAAGGCAC+TGG | 0.624826 | 7_2:-3354859 | None:intergenic |
| TTTACACATGCAGACAGTGG+CGG | 0.625976 | 7_2:+3355794 | Msa1044710:three_prime_UTR |
| CGAGGAAGGAGAGTGCGGAG+TGG | 0.626318 | 7_2:-3351883 | None:intergenic |
| CATCCTCACACTCAGATGCA+AGG | 0.626874 | 7_2:+3354085 | Msa1044710:CDS |
| ATACAAACAGGGATAGTGAA+GGG | 0.627122 | 7_2:+3355168 | Msa1044710:CDS |
| GCAACCTACAGGAGTTGCAA+AGG | 0.628607 | 7_2:+3354178 | Msa1044710:CDS |
| AATACAAACAGGGATAGTGA+AGG | 0.628952 | 7_2:+3355167 | Msa1044710:CDS |
| CGATGGTCAGCAATCGCCTG+GGG | 0.630235 | 7_2:-3354015 | None:intergenic |
| GTGGTCGAGGAAGGAGAGTG+CGG | 0.631459 | 7_2:-3351888 | None:intergenic |
| AGACGCTAGATGGCGAACAA+AGG | 0.631692 | 7_2:-3354865 | None:intergenic |
| GAGTGCAAGAATGTATGACA+GGG | 0.635024 | 7_2:+3355663 | Msa1044710:CDS |
| GTGCAAGAATGTATGACAGG+GGG | 0.636256 | 7_2:+3355665 | Msa1044710:CDS |
| TTTGTGATTGAAGATGGAGG+AGG | 0.636897 | 7_2:+3352218 | Msa1044710:intron |
| AACAGATTCAAAGTAATGAG+CGG | 0.639272 | 7_2:-3355069 | None:intergenic |
| GATGCTGTATCGTATACCAT+GGG | 0.640474 | 7_2:+3353726 | Msa1044710:CDS |
| GAAATTCATAGCCTCTTCGA+TGG | 0.641388 | 7_2:+3352055 | Msa1044710:CDS |
| TGTTAAAGCAGAAAGAGGTG+GGG | 0.643097 | 7_2:-3354064 | None:intergenic |
| AGAAGAATGGATCTCAGCAA+TGG | 0.644706 | 7_2:+3354446 | Msa1044710:CDS |
| AAGCTATCATCAAGTCAATG+AGG | 0.646451 | 7_2:-3354581 | None:intergenic |
| GCGCTCTTGATGACTTGACT+CGG | 0.647194 | 7_2:+3351990 | Msa1044710:CDS |
| ACAAAGGCACTGGAAACTAG+AGG | 0.680177 | 7_2:-3354849 | None:intergenic |
| TGCAAGAATGTATGACAGGG+GGG | 0.681015 | 7_2:+3355666 | Msa1044710:CDS |
| CAAACCTTGCACAATGCCGG+AGG | 0.683818 | 7_2:-3352116 | None:intergenic |
| AAGGGATTATGTTGACTCTG+TGG | 0.686990 | 7_2:+3354368 | Msa1044710:CDS |
| AATCCTTGCATCTGAGTGTG+AGG | 0.694787 | 7_2:-3354088 | None:intergenic |
| CTTGACTCGGAGACTCGGTG+CGG | 0.694872 | 7_2:+3352003 | Msa1044710:CDS |
| AATTAACCGATCTATTCCTG+CGG | 0.698953 | 7_2:-3355471 | None:intergenic |
| AACACTAAAACTCATTTACG+CGG | 0.701217 | 7_2:-3355894 | None:intergenic |
| AGAGCACTGAGTTTGAAGCT+CGG | 0.705028 | 7_2:-3351957 | None:intergenic |
| ACGAAGATAGAAGTGCCCGA+TGG | 0.710927 | 7_2:-3354032 | None:intergenic |
| CGAAATTGGGAGACTCGGTG+AGG | 0.718197 | 7_2:-3351931 | None:intergenic |
| ATTACCAAGTAATACAAACA+GGG | 0.720880 | 7_2:+3355157 | Msa1044710:CDS |
| AGTGCAAGAATGTATGACAG+GGG | 0.726480 | 7_2:+3355664 | Msa1044710:CDS |
| ACTTGTGTATAAGATCACAA+GGG | 0.757277 | 7_2:+3354350 | Msa1044710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTCTTAAAGAAA+TGG | + | chr7_2:3353240-3353259 | Msa1044710:intron | 10.0% |
| !!! | ATTTGAAGATTTTTGATTTT+AGG | + | chr7_2:3352151-3352170 | Msa1044710:intron | 15.0% |
| !!! | TGTAAATTTCAACAATATTT+TGG | + | chr7_2:3353283-3353302 | Msa1044710:intron | 15.0% |
| !!! | GTAAATTTCAACAATATTTT+GGG | + | chr7_2:3353284-3353303 | Msa1044710:intron | 15.0% |
| !!! | TATATTTTCTTATAGATAGA+TGG | + | chr7_2:3353440-3353459 | Msa1044710:intron | 15.0% |
| !!! | TCAGAAAATTTTCTTATAAT+AGG | - | chr7_2:3354960-3354979 | None:intergenic | 15.0% |
| !!! | TTTAATTAAAGCATCATTAT+CGG | - | chr7_2:3355030-3355049 | None:intergenic | 15.0% |
| !! | TGAATGGATAAAAAATAATT+TGG | - | chr7_2:3355845-3355864 | None:intergenic | 15.0% |
| !!! | GATTTTATACAATTTTATGT+CGG | - | chr7_2:3355940-3355959 | None:intergenic | 15.0% |
| !! | TATCTTTGTAATGATTTCTT+TGG | + | chr7_2:3353189-3353208 | Msa1044710:intron | 20.0% |
| !! | ATCTTAGCATTTCTTTATAA+TGG | - | chr7_2:3353342-3353361 | None:intergenic | 20.0% |
| !! | TCAATAGTAGTTATATTCTT+AGG | + | chr7_2:3353365-3353384 | Msa1044710:intron | 20.0% |
| !! | TGTAAATTCGAACAATATTT+AGG | + | chr7_2:3353485-3353504 | Msa1044710:intron | 20.0% |
| !! | GTAAATTCGAACAATATTTA+GGG | + | chr7_2:3353486-3353505 | Msa1044710:intron | 20.0% |
| !! | AACATTTGAAGATACATTAA+GGG | - | chr7_2:3353853-3353872 | None:intergenic | 20.0% |
| !! | ACAAGTGTAAAAATAAATTC+TGG | - | chr7_2:3354336-3354355 | None:intergenic | 20.0% |
| !!! | TTGAATCTGTTTTAAATGAA+TGG | + | chr7_2:3355081-3355100 | Msa1044710:CDS | 20.0% |
| !!! | ATAGATCGGTTAATTTTTAA+TGG | + | chr7_2:3355479-3355498 | Msa1044710:CDS | 20.0% |
| !!! | TAGATCGGTTAATTTTTAAT+GGG | + | chr7_2:3355480-3355499 | Msa1044710:CDS | 20.0% |
| !!! | AGCAATGCAAAATTTTATAA+TGG | + | chr7_2:3355512-3355531 | Msa1044710:CDS | 20.0% |
| !!! | AATGCAAAATTTTATAATGG+TGG | + | chr7_2:3355515-3355534 | Msa1044710:CDS | 20.0% |
| !!! | TTTTTCCTTAATACAAATGA+AGG | + | chr7_2:3355611-3355630 | Msa1044710:CDS | 20.0% |
| !! | AAATTTGCACATGAAATAAT+TGG | - | chr7_2:3355873-3355892 | None:intergenic | 20.0% |
| !!! | TTTGTTTTTGTGATTGAAGA+TGG | + | chr7_2:3352212-3352231 | Msa1044710:intron | 25.0% |
| !!! | TTTTGTTTTTGTGCTTGAAT+TGG | + | chr7_2:3352336-3352355 | Msa1044710:intron | 25.0% |
| !! | AAATCACAGAACATTTTAGA+GGG | + | chr7_2:3352406-3352425 | Msa1044710:intron | 25.0% |
| !! | TTATTTATGAAGCATTCGAT+AGG | + | chr7_2:3352471-3352490 | Msa1044710:intron | 25.0% |
| ! | TAGAAAAGATGGTAGAAAAT+AGG | + | chr7_2:3352673-3352692 | Msa1044710:intron | 25.0% |
| !! | GTTCTATTTGAAACCATATT+TGG | - | chr7_2:3352854-3352873 | None:intergenic | 25.0% |
| !!! | TTGTTATTTATGAAGCATAG+AGG | + | chr7_2:3352938-3352957 | Msa1044710:intron | 25.0% |
| ! | ATTCTTAGGTATGATTTCTT+TGG | + | chr7_2:3353379-3353398 | Msa1044710:intron | 25.0% |
| ! | TAATCTGAATCTGATGATAT+TGG | + | chr7_2:3353807-3353826 | Msa1044710:intron | 25.0% |
| ! | AATCTGAATCTGATGATATT+GGG | + | chr7_2:3353808-3353827 | Msa1044710:intron | 25.0% |
| ! | ATACATTAAGGGATATAGTA+CGG | - | chr7_2:3353842-3353861 | None:intergenic | 25.0% |
| ! | CAACATTTGAAGATACATTA+AGG | - | chr7_2:3353854-3353873 | None:intergenic | 25.0% |
| ! | CTAGTTGAGTAATATAACTA+GGG | - | chr7_2:3354509-3354528 | None:intergenic | 25.0% |
| ! | TCTAGTTGAGTAATATAACT+AGG | - | chr7_2:3354510-3354529 | None:intergenic | 25.0% |
| ! | TTATATTACTCAACTAGAAG+AGG | + | chr7_2:3354512-3354531 | Msa1044710:CDS | 25.0% |
| ! | TGACAAAAAGATTATGTCTT+TGG | + | chr7_2:3354605-3354624 | Msa1044710:CDS | 25.0% |
| ! | TCAAAATTTCTCAGATTAGT+AGG | + | chr7_2:3354930-3354949 | Msa1044710:CDS | 25.0% |
| ! | AATTACCAAGTAATACAAAC+AGG | + | chr7_2:3355156-3355175 | Msa1044710:CDS | 25.0% |
| ! | ATTACCAAGTAATACAAACA+GGG | + | chr7_2:3355157-3355176 | Msa1044710:CDS | 25.0% |
| ! | ATTTGAAGAACAAAAAGCAA+TGG | + | chr7_2:3355318-3355337 | Msa1044710:CDS | 25.0% |
| !!! | ATGTTTTATTTGGGGTATTT+GGG | + | chr7_2:3355564-3355583 | Msa1044710:CDS | 25.0% |
| ! | TAAGACCTTCATTTGTATTA+AGG | - | chr7_2:3355619-3355638 | None:intergenic | 25.0% |
| !!! | TACAATTTTATGTCGGTTTT+AGG | - | chr7_2:3355933-3355952 | None:intergenic | 25.0% |
| ! | CAAATCACAGAACATTTTAG+AGG | + | chr7_2:3352405-3352424 | Msa1044710:intron | 30.0% |
| !! | AATCACAGAACATTTTAGAG+GGG | + | chr7_2:3352407-3352426 | Msa1044710:intron | 30.0% |
| !!! | CGCTTACTTTATTTTTGTGT+TGG | - | chr7_2:3352550-3352569 | None:intergenic | 30.0% |
| CAAAAATAAAGTAAGCGTAG+CGG | + | chr7_2:3352553-3352572 | Msa1044710:CDS | 30.0% | |
| ! | TCTACCATCTTTTCTACTAT+AGG | - | chr7_2:3352669-3352688 | None:intergenic | 30.0% |
| ! | AAAATAGGCTTAGTTGGTTT+GGG | + | chr7_2:3352688-3352707 | Msa1044710:intron | 30.0% |
| AACTATTCAGAAAGAATCAG+AGG | + | chr7_2:3352814-3352833 | Msa1044710:intron | 30.0% | |
| CTTGAGACTTGACATAAAAA+GGG | - | chr7_2:3353410-3353429 | None:intergenic | 30.0% | |
| ACTTGAGACTTGACATAAAA+AGG | - | chr7_2:3353411-3353430 | None:intergenic | 30.0% | |
| ! | TCTTTTCATGATGAGTTTGT+TGG | + | chr7_2:3353551-3353570 | Msa1044710:intron | 30.0% |
| !! | CTTTTCATGATGAGTTTGTT+GGG | + | chr7_2:3353552-3353571 | Msa1044710:intron | 30.0% |
| ! | GGGATTATCAAGAAAAGTTT+TGG | + | chr7_2:3353572-3353591 | Msa1044710:intron | 30.0% |
| AATTGTTACCATACTGCATT+TGG | + | chr7_2:3353604-3353623 | Msa1044710:intron | 30.0% | |
| AAATCAAACCAAATGCAGTA+TGG | - | chr7_2:3353615-3353634 | None:intergenic | 30.0% | |
| !! | TGCATTTGGTTTGATTTCTT+AGG | + | chr7_2:3353618-3353637 | Msa1044710:intron | 30.0% |
| !! | AGGACTTTTAAGAAGCTAAA+AGG | - | chr7_2:3353650-3353669 | None:intergenic | 30.0% |
| !! | CCTTATGTTTTTATTACCCA+TGG | - | chr7_2:3353745-3353764 | None:intergenic | 30.0% |
| CCATGGGTAATAAAAACATA+AGG | + | chr7_2:3353742-3353761 | Msa1044710:CDS | 30.0% | |
| AATGTATCTTCAAATGTTGC+AGG | + | chr7_2:3353855-3353874 | Msa1044710:intron | 30.0% | |
| TTACAAATATACACCCTCAA+TGG | + | chr7_2:3353935-3353954 | Msa1044710:CDS | 30.0% | |
| ATACAAGATTCTTCCATTGA+GGG | - | chr7_2:3353951-3353970 | None:intergenic | 30.0% | |
| !! | CCATTTTGAGAAATGCTTTT+CGG | - | chr7_2:3354304-3354323 | None:intergenic | 30.0% |
| !! | CGAAAAGCATTTCTCAAAAT+GGG | + | chr7_2:3354302-3354321 | Msa1044710:CDS | 30.0% |
| ACTTGTGTATAAGATCACAA+GGG | + | chr7_2:3354350-3354369 | Msa1044710:CDS | 30.0% | |
| ATGTCTTTGGTAGAAAATTC+TGG | + | chr7_2:3354618-3354637 | Msa1044710:CDS | 30.0% | |
| TGTCTTTGGTAGAAAATTCT+GGG | + | chr7_2:3354619-3354638 | Msa1044710:CDS | 30.0% | |
| ! | TTATTCTCGTTTTCAATGTC+TGG | - | chr7_2:3354771-3354790 | None:intergenic | 30.0% |
| ACATTGAAAACGAGAATAAC+TGG | + | chr7_2:3354772-3354791 | Msa1044710:CDS | 30.0% | |
| AACAGATTCAAAGTAATGAG+CGG | - | chr7_2:3355072-3355091 | None:intergenic | 30.0% | |
| ATCGTCAAAGATAACTCTAT+TGG | - | chr7_2:3355207-3355226 | None:intergenic | 30.0% | |
| !!! | ATAGCTGTAGTTATTTTGAG+AGG | + | chr7_2:3355272-3355291 | Msa1044710:CDS | 30.0% |
| !! | AATGACCTGGATGTTTTATT+TGG | + | chr7_2:3355554-3355573 | Msa1044710:CDS | 30.0% |
| !!! | ATGACCTGGATGTTTTATTT+GGG | + | chr7_2:3355555-3355574 | Msa1044710:CDS | 30.0% |
| !!! | GATGTTTTATTTGGGGTATT+TGG | + | chr7_2:3355563-3355582 | Msa1044710:CDS | 30.0% |
| !!! | TGTTTTATTTGGGGTATTTG+GGG | + | chr7_2:3355565-3355584 | Msa1044710:CDS | 30.0% |
| GTATTAAGGAAAAAACCTTC+TGG | - | chr7_2:3355605-3355624 | None:intergenic | 30.0% | |
| AGGTCTTAAATTGTTGAAGA+TGG | + | chr7_2:3355631-3355650 | Msa1044710:CDS | 30.0% | |
| !! | CTAGAAAATATTTTGGGGAT+GGG | + | chr7_2:3355819-3355838 | Msa1044710:three_prime_UTR | 30.0% |
| GAAATAATTGGTCACTTGAA+TGG | - | chr7_2:3355861-3355880 | None:intergenic | 30.0% | |
| AACACTAAAACTCATTTACG+CGG | - | chr7_2:3355897-3355916 | None:intergenic | 30.0% | |
| !!! | TTTATGTCGGTTTTAGGTTT+CGG | - | chr7_2:3355927-3355946 | None:intergenic | 30.0% |
| ! | TGAAGTGGTTTTCGTTGTTT+GGG | - | chr7_2:3351733-3351752 | None:intergenic | 35.0% |
| ! | ATGAAGTGGTTTTCGTTGTT+TGG | - | chr7_2:3351734-3351753 | None:intergenic | 35.0% |
| ! | GTTTTTGTGATTGAAGATGG+AGG | + | chr7_2:3352215-3352234 | Msa1044710:intron | 35.0% |
| !! | ATCACAGAACATTTTAGAGG+GGG | + | chr7_2:3352408-3352427 | Msa1044710:intron | 35.0% |
| TTTAGAGGGGGAAAAATGAA+AGG | + | chr7_2:3352420-3352439 | Msa1044710:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGT+TGG | + | chr7_2:3352682-3352701 | Msa1044710:intron | 35.0% | |
| GAAAATAGGCTTAGTTGGTT+TGG | + | chr7_2:3352687-3352706 | Msa1044710:intron | 35.0% | |
| TCTTCGTACTACAACATCAT+TGG | - | chr7_2:3352729-3352748 | None:intergenic | 35.0% | |
| AGTACGAAGAGTAGATTAGA+TGG | + | chr7_2:3352739-3352758 | Msa1044710:intron | 35.0% | |
| ! | TAACGAGTTGGATCCAAATA+TGG | + | chr7_2:3352838-3352857 | Msa1044710:intron | 35.0% |
| ! | AAGTCTTATCCAACTAAGTG+AGG | - | chr7_2:3352907-3352926 | None:intergenic | 35.0% |
| ! | AGCACTGAAACTTGATACAT+TGG | + | chr7_2:3353689-3353708 | Msa1044710:CDS | 35.0% |
| CTGAAACTTGATACATTGGT+TGG | + | chr7_2:3353693-3353712 | Msa1044710:CDS | 35.0% | |
| CATTCTTCTGACAAGAATTC+AGG | + | chr7_2:3353768-3353787 | Msa1044710:CDS | 35.0% | |
| GATACAAGATTCTTCCATTG+AGG | - | chr7_2:3353952-3353971 | None:intergenic | 35.0% | |
| ATGTTAAAGCAGAAAGAGGT+GGG | - | chr7_2:3354068-3354087 | None:intergenic | 35.0% | |
| AAGGAAATCTAGACAACTTG+TGG | + | chr7_2:3354203-3354222 | Msa1044710:CDS | 35.0% | |
| AGGAAATCTAGACAACTTGT+GGG | + | chr7_2:3354204-3354223 | Msa1044710:CDS | 35.0% | |
| !! | CCGAAAAGCATTTCTCAAAA+TGG | + | chr7_2:3354301-3354320 | Msa1044710:CDS | 35.0% |
| CACTTGTGTATAAGATCACA+AGG | + | chr7_2:3354349-3354368 | Msa1044710:CDS | 35.0% | |
| AATTTCCTTTGCCAAGTATG+TGG | - | chr7_2:3354484-3354503 | None:intergenic | 35.0% | |
| !! | AGTCAGCTTCTAGAATATCA+TGG | + | chr7_2:3354553-3354572 | Msa1044710:CDS | 35.0% |
| AAGCTATCATCAAGTCAATG+AGG | - | chr7_2:3354584-3354603 | None:intergenic | 35.0% | |
| ! | TATTTTGTGATCGTCCAGAT+TGG | + | chr7_2:3354694-3354713 | Msa1044710:CDS | 35.0% |
| ! | GTCTGGTTTCAACTTATCTA+GGG | - | chr7_2:3354754-3354773 | None:intergenic | 35.0% |
| ! | TGTCTGGTTTCAACTTATCT+AGG | - | chr7_2:3354755-3354774 | None:intergenic | 35.0% |
| !! | CATTGCCTAATGTTACTTTG+CGG | + | chr7_2:3354907-3354926 | Msa1044710:CDS | 35.0% |
| TTTGACCGCAAAGTAACATT+AGG | - | chr7_2:3354915-3354934 | None:intergenic | 35.0% | |
| ! | AGATGTCTTTTTCCTTGAGA+TGG | + | chr7_2:3355109-3355128 | Msa1044710:CDS | 35.0% |
| ! | GATGTCTTTTTCCTTGAGAT+GGG | + | chr7_2:3355110-3355129 | Msa1044710:CDS | 35.0% |
| ! | ATGTCTTTTTCCTTGAGATG+GGG | + | chr7_2:3355111-3355130 | Msa1044710:CDS | 35.0% |
| CTATCCCTGTTTGTATTACT+TGG | - | chr7_2:3355164-3355183 | None:intergenic | 35.0% | |
| AATACAAACAGGGATAGTGA+AGG | + | chr7_2:3355167-3355186 | Msa1044710:CDS | 35.0% | |
| ATACAAACAGGGATAGTGAA+GGG | + | chr7_2:3355168-3355187 | Msa1044710:CDS | 35.0% | |
| ATAACTCTATTGGAACTCTC+TGG | - | chr7_2:3355197-3355216 | None:intergenic | 35.0% | |
| TGACGATGAAATCAAACAGT+TGG | + | chr7_2:3355220-3355239 | Msa1044710:CDS | 35.0% | |
| ! | AGTGTCTAAGACTCTAATAG+AGG | + | chr7_2:3355364-3355383 | Msa1044710:CDS | 35.0% |
| TTTACCTTGCAGATAATCCA+AGG | - | chr7_2:3355390-3355409 | None:intergenic | 35.0% | |
| GGATTATCTGCAAGGTAAAA+TGG | + | chr7_2:3355391-3355410 | Msa1044710:CDS | 35.0% | |
| TAGAAGAAGGTTTGAATAGC+AGG | + | chr7_2:3355420-3355439 | Msa1044710:CDS | 35.0% | |
| AGAAGAAGGTTTGAATAGCA+GGG | + | chr7_2:3355421-3355440 | Msa1044710:CDS | 35.0% | |
| ! | TTGAATAGCAGGGATTTTGT+TGG | + | chr7_2:3355431-3355450 | Msa1044710:CDS | 35.0% |
| ! | TGAATAGCAGGGATTTTGTT+GGG | + | chr7_2:3355432-3355451 | Msa1044710:CDS | 35.0% |
| AATTAACCGATCTATTCCTG+CGG | - | chr7_2:3355474-3355493 | None:intergenic | 35.0% | |
| ! | AATGGTGGTGTTGAAAGATT+TGG | + | chr7_2:3355530-3355549 | Msa1044710:CDS | 35.0% |
| !! | TGAAAGATTTGGTAATGACC+TGG | + | chr7_2:3355541-3355560 | Msa1044710:CDS | 35.0% |
| !!! | TGACCTGGATGTTTTATTTG+GGG | + | chr7_2:3355556-3355575 | Msa1044710:CDS | 35.0% |
| ATACCCCAAATAAAACATCC+AGG | - | chr7_2:3355562-3355581 | None:intergenic | 35.0% | |
| !!! | TTTTTTACACATGCAGACAG+TGG | + | chr7_2:3355791-3355810 | Msa1044710:three_prime_UTR | 35.0% |
| ! | GCGGAGCTAGAAAATATTTT+GGG | + | chr7_2:3355813-3355832 | Msa1044710:three_prime_UTR | 35.0% |
| ! | CGGAGCTAGAAAATATTTTG+GGG | + | chr7_2:3355814-3355833 | Msa1044710:three_prime_UTR | 35.0% |
| !! | GCTAGAAAATATTTTGGGGA+TGG | + | chr7_2:3355818-3355837 | Msa1044710:three_prime_UTR | 35.0% |
| !! | GCGTAAATGAGTTTTAGTGT+TGG | + | chr7_2:3355896-3355915 | Msa1044710:three_prime_UTR | 35.0% |
| TCGGTGAATTTCGATCTTGA+TGG | - | chr7_2:3351823-3351842 | None:intergenic | 40.0% | |
| GAAATTCATAGCCTCTTCGA+TGG | + | chr7_2:3352055-3352074 | Msa1044710:CDS | 40.0% | |
| TGAATTTGACACCATCGAAG+AGG | - | chr7_2:3352069-3352088 | None:intergenic | 40.0% | |
| ATTCAAACCTTGCACAATGC+CGG | - | chr7_2:3352122-3352141 | None:intergenic | 40.0% | |
| TTTGTGATTGAAGATGGAGG+AGG | + | chr7_2:3352218-3352237 | Msa1044710:intron | 40.0% | |
| !!! | AGATGGGAAAGGTTTTAGAG+AGG | + | chr7_2:3352250-3352269 | Msa1044710:CDS | 40.0% |
| TTCGTACCATACAACATTGC+CGG | - | chr7_2:3352509-3352528 | None:intergenic | 40.0% | |
| TGTTGTATGGTACGAAGTGT+TGG | + | chr7_2:3352513-3352532 | Msa1044710:CDS | 40.0% | |
| ! | GTTGTATGGTACGAAGTGTT+GGG | + | chr7_2:3352514-3352533 | Msa1044710:CDS | 40.0% |
| GATGAGTGGTAAGACTAGAT+GGG | + | chr7_2:3352595-3352614 | Msa1044710:intron | 40.0% | |
| ACAACTCTCTCTCTCTCTAA+TGG | - | chr7_2:3352639-3352658 | None:intergenic | 40.0% | |
| ATTAGAGAGAGAGAGAGTTG+TGG | + | chr7_2:3352638-3352657 | Msa1044710:intron | 40.0% | |
| AGCGCCTATAGTAGAAAAGA+TGG | + | chr7_2:3352662-3352681 | Msa1044710:intron | 40.0% | |
| ACGAAGAGTAGATTAGATGG+AGG | + | chr7_2:3352742-3352761 | Msa1044710:intron | 40.0% | |
| AGTCAGATTAGAAGAGGTAG+AGG | + | chr7_2:3352767-3352786 | Msa1044710:intron | 40.0% | |
| AGAATCAGAGGTTAACGAGT+TGG | + | chr7_2:3352826-3352845 | Msa1044710:intron | 40.0% | |
| CTTATCCAACTAAGTGAGGT+CGG | - | chr7_2:3352903-3352922 | None:intergenic | 40.0% | |
| ACATATGCCAACCCATATGT+TGG | + | chr7_2:3353031-3353050 | Msa1044710:intron | 40.0% | |
| TTCAGTGTAAGAGTCTGACA+TGG | - | chr7_2:3353065-3353084 | None:intergenic | 40.0% | |
| ACACCTTCAATCTCAAGTGT+CGG | + | chr7_2:3353085-3353104 | Msa1044710:intron | 40.0% | |
| AGATGCTGTATCGTATACCA+TGG | + | chr7_2:3353725-3353744 | Msa1044710:CDS | 40.0% | |
| GATGCTGTATCGTATACCAT+GGG | + | chr7_2:3353726-3353745 | Msa1044710:CDS | 40.0% | |
| CACTTCTATCTTCGTTTGGA+TGG | + | chr7_2:3354040-3354059 | Msa1044710:CDS | 40.0% | |
| TGTTAAAGCAGAAAGAGGTG+GGG | - | chr7_2:3354067-3354086 | None:intergenic | 40.0% | |
| GATGTTAAAGCAGAAAGAGG+TGG | - | chr7_2:3354069-3354088 | None:intergenic | 40.0% | |
| GAGGATGTTAAAGCAGAAAG+AGG | - | chr7_2:3354072-3354091 | None:intergenic | 40.0% | |
| TGAGTACCTGAGCTTATGAT+CGG | - | chr7_2:3354139-3354158 | None:intergenic | 40.0% | |
| ! | TTTTCCTTTGCAACTCCTGT+AGG | - | chr7_2:3354185-3354204 | None:intergenic | 40.0% |
| TACAGGAGTTGCAAAGGAAA+AGG | + | chr7_2:3354184-3354203 | Msa1044710:CDS | 40.0% | |
| ! | TTTTCGGAAGCCAATGATAG+GGG | - | chr7_2:3354288-3354307 | None:intergenic | 40.0% |
| ! | CTTTTCGGAAGCCAATGATA+GGG | - | chr7_2:3354289-3354308 | None:intergenic | 40.0% |
| !! | AAGGGATTATGTTGACTCTG+TGG | + | chr7_2:3354368-3354387 | Msa1044710:CDS | 40.0% |
| GGATGAAATGTTACAGCCAT+TGG | + | chr7_2:3354389-3354408 | Msa1044710:CDS | 40.0% | |
| ACCTTAGCTTCATCAACCAA+TGG | - | chr7_2:3354408-3354427 | None:intergenic | 40.0% | |
| ! | GTTGATGAAGCTAAGGTAGT+TGG | + | chr7_2:3354411-3354430 | Msa1044710:CDS | 40.0% |
| GATATAGTTGCCGAGAAGAA+TGG | + | chr7_2:3354433-3354452 | Msa1044710:CDS | 40.0% | |
| TTGCTGAGATCCATTCTTCT+CGG | - | chr7_2:3354446-3354465 | None:intergenic | 40.0% | |
| AGAAGAATGGATCTCAGCAA+TGG | + | chr7_2:3354446-3354465 | Msa1044710:CDS | 40.0% | |
| AACCTCCTTATCCACATACT+TGG | + | chr7_2:3354470-3354489 | Msa1044710:CDS | 40.0% | |
| CTTTGCCAAGTATGTGGATA+AGG | - | chr7_2:3354478-3354497 | None:intergenic | 40.0% | |
| CTTATCCACATACTTGGCAA+AGG | + | chr7_2:3354476-3354495 | Msa1044710:CDS | 40.0% | |
| !! | TCCAGATTGGCTTGATTTGT+GGG | + | chr7_2:3354707-3354726 | Msa1044710:CDS | 40.0% |
| ! | AAAGTAATGAGCGGCATTGA+TGG | - | chr7_2:3355063-3355082 | None:intergenic | 40.0% |
| ! | TGTCTTTTTCCTTGAGATGG+GGG | + | chr7_2:3355112-3355131 | Msa1044710:CDS | 40.0% |
| ! | TGGAAGAGTTTAGAACAGAG+TGG | + | chr7_2:3355240-3355259 | Msa1044710:CDS | 40.0% |
| ! | GGAAGAGTTTAGAACAGAGT+GGG | + | chr7_2:3355241-3355260 | Msa1044710:CDS | 40.0% |
| CAATGGCAAAAGAGTGAAGA+AGG | + | chr7_2:3355335-3355354 | Msa1044710:CDS | 40.0% | |
| TAAGACTCTAATAGAGGCCT+TGG | + | chr7_2:3355370-3355389 | Msa1044710:CDS | 40.0% | |
| AAAATGGCAGTGGTAGAAGA+AGG | + | chr7_2:3355407-3355426 | Msa1044710:CDS | 40.0% | |
| ! | GAATAGCAGGGATTTTGTTG+GGG | + | chr7_2:3355433-3355452 | Msa1044710:CDS | 40.0% |
| AGAGTGCAAGAATGTATGAC+AGG | + | chr7_2:3355662-3355681 | Msa1044710:CDS | 40.0% | |
| GAGTGCAAGAATGTATGACA+GGG | + | chr7_2:3355663-3355682 | Msa1044710:CDS | 40.0% | |
| AGTGCAAGAATGTATGACAG+GGG | + | chr7_2:3355664-3355683 | Msa1044710:CDS | 40.0% | |
| AAGAGATGGTTGAAGGAGAA+TGG | + | chr7_2:3355689-3355708 | Msa1044710:CDS | 40.0% | |
| AGAGATGGTTGAAGGAGAAT+GGG | + | chr7_2:3355690-3355709 | Msa1044710:CDS | 40.0% | |
| ! | GGCGGAGCTAGAAAATATTT+TGG | + | chr7_2:3355812-3355831 | Msa1044710:three_prime_UTR | 40.0% |
| AACGAAAACCACTTCATCGC+CGG | + | chr7_2:3351737-3351756 | Msa1044710:five_prime_UTR | 45.0% | |
| ! | TCGATCTTGATGGTTGCAGA+AGG | - | chr7_2:3351813-3351832 | None:intergenic | 45.0% |
| !! | AGAGCACTGAGTTTGAAGCT+CGG | - | chr7_2:3351960-3351979 | None:intergenic | 45.0% |
| ! | TCAAACTCAGTGCTCTGAGT+TGG | + | chr7_2:3351964-3351983 | Msa1044710:CDS | 45.0% |
| GAAGAGGCTATGAATTTCGC+CGG | - | chr7_2:3352053-3352072 | None:intergenic | 45.0% | |
| CTATCTGATACTTGCTCCTC+CGG | + | chr7_2:3352100-3352119 | Msa1044710:CDS | 45.0% | |
| TAGAGAGGAACTTGCGACTT+TGG | + | chr7_2:3352265-3352284 | Msa1044710:CDS | 45.0% | |
| GAGACTGTTCGTGTTTATGC+AGG | + | chr7_2:3352308-3352327 | Msa1044710:CDS | 45.0% | |
| CGATAGGACAACAGTTAGAC+CGG | + | chr7_2:3352487-3352506 | Msa1044710:CDS | 45.0% | |
| GTTAGACCGGCAATGTTGTA+TGG | + | chr7_2:3352500-3352519 | Msa1044710:CDS | 45.0% | |
| GGATGAGTGGTAAGACTAGA+TGG | + | chr7_2:3352594-3352613 | Msa1044710:intron | 45.0% | |
| GTGGTAAGACTAGATGGGAT+AGG | + | chr7_2:3352600-3352619 | Msa1044710:intron | 45.0% | |
| GAGGAGAGTCAGATTAGAAG+AGG | + | chr7_2:3352761-3352780 | Msa1044710:intron | 45.0% | |
| TATGAAGCATAGAGGACACC+AGG | + | chr7_2:3352946-3352965 | Msa1044710:intron | 45.0% | |
| TGGACACAGCACCAACATAT+GGG | - | chr7_2:3353045-3353064 | None:intergenic | 45.0% | |
| ATGGACACAGCACCAACATA+TGG | - | chr7_2:3353046-3353065 | None:intergenic | 45.0% | |
| !! | TCTCAAGTGTCGGTGCTTAA+TGG | + | chr7_2:3353095-3353114 | Msa1044710:intron | 45.0% |
| ! | TGTCTCTGGAAGACACACAA+AGG | - | chr7_2:3353670-3353689 | None:intergenic | 45.0% |
| TCAAGTTTCAGTGCTGTCTC+TGG | - | chr7_2:3353684-3353703 | None:intergenic | 45.0% | |
| CTAGAGCTCGATCTACTCTA+TGG | - | chr7_2:3353984-3354003 | None:intergenic | 45.0% | |
| !!! | TCTAGCCATTTTAAGACCCC+AGG | + | chr7_2:3353999-3354018 | Msa1044710:CDS | 45.0% |
| AATCGCCTGGGGTCTTAAAA+TGG | - | chr7_2:3354007-3354026 | None:intergenic | 45.0% | |
| GTTAAAGCAGAAAGAGGTGG+GGG | - | chr7_2:3354066-3354085 | None:intergenic | 45.0% | |
| AATCCTTGCATCTGAGTGTG+AGG | - | chr7_2:3354091-3354110 | None:intergenic | 45.0% | |
| TCTTGCTTTGTGCAACCTAC+AGG | + | chr7_2:3354167-3354186 | Msa1044710:CDS | 45.0% | |
| ACAACTTGTGGGCCATGATA+GGG | + | chr7_2:3354215-3354234 | Msa1044710:CDS | 45.0% | |
| AGCTCTTCAATTGCCCAAAG+TGG | - | chr7_2:3354258-3354277 | None:intergenic | 45.0% | |
| GCTTGTGAATCCCCTATCAT+TGG | + | chr7_2:3354275-3354294 | Msa1044710:CDS | 45.0% | |
| ! | GCTTTTCGGAAGCCAATGAT+AGG | - | chr7_2:3354290-3354309 | None:intergenic | 45.0% |
| !! | GCCATTGGTTGATGAAGCTA+AGG | + | chr7_2:3354404-3354423 | Msa1044710:CDS | 45.0% |
| TGCCAAGTATGTGGATAAGG+AGG | - | chr7_2:3354475-3354494 | None:intergenic | 45.0% | |
| !! | GTCCAGATTGGCTTGATTTG+TGG | + | chr7_2:3354706-3354725 | Msa1044710:CDS | 45.0% |
| TTGTGGGCAGAAATAGAGCT+AGG | + | chr7_2:3354723-3354742 | Msa1044710:CDS | 45.0% | |
| !! | ACAAAGGCACTGGAAACTAG+AGG | - | chr7_2:3354852-3354871 | None:intergenic | 45.0% |
| GTTCAACAACAGACGCTAGA+TGG | - | chr7_2:3354878-3354897 | None:intergenic | 45.0% | |
| CGTCTGTTGTTGAACGTTGT+CGG | + | chr7_2:3354883-3354902 | Msa1044710:CDS | 45.0% | |
| !! | TTCTTGGCAACGGACTAGTA+TGG | - | chr7_2:3354985-3355004 | None:intergenic | 45.0% |
| GGCAAAAGAGTGAAGAAGGT+TGG | + | chr7_2:3355339-3355358 | Msa1044710:CDS | 45.0% | |
| TCTGCAAGGTAAAATGGCAG+TGG | + | chr7_2:3355397-3355416 | Msa1044710:CDS | 45.0% | |
| TGTTGGGGTTTGGAGAAGTT+TGG | + | chr7_2:3355448-3355467 | Msa1044710:CDS | 45.0% | |
| ! | TATTTGGGGTATTTGGGGCA+TGG | + | chr7_2:3355570-3355589 | Msa1044710:CDS | 45.0% |
| GTGCAAGAATGTATGACAGG+GGG | + | chr7_2:3355665-3355684 | Msa1044710:CDS | 45.0% | |
| TGCAAGAATGTATGACAGGG+GGG | + | chr7_2:3355666-3355685 | Msa1044710:CDS | 45.0% | |
| TTTACACATGCAGACAGTGG+CGG | + | chr7_2:3355794-3355813 | Msa1044710:three_prime_UTR | 45.0% | |
| GTAGGAGGAAGATGAGTCTC+CGG | - | chr7_2:3351759-3351778 | None:intergenic | 50.0% | |
| GACTCATCTTCCTCCTACAC+TGG | + | chr7_2:3351761-3351780 | Msa1044710:five_prime_UTR | 50.0% | |
| ! | AGATGAGAAGATGGTGGCAG+TGG | - | chr7_2:3351860-3351879 | None:intergenic | 50.0% |
| TGGGAGAGATGAGAAGATGG+TGG | - | chr7_2:3351866-3351885 | None:intergenic | 50.0% | |
| GAGTGGGAGAGATGAGAAGA+TGG | - | chr7_2:3351869-3351888 | None:intergenic | 50.0% | |
| TGAAGCTCGGCGACGAAATT+GGG | - | chr7_2:3351947-3351966 | None:intergenic | 50.0% | |
| TTGAAGCTCGGCGACGAAAT+TGG | - | chr7_2:3351948-3351967 | None:intergenic | 50.0% | |
| ! | GCGCTCTTGATGACTTGACT+CGG | + | chr7_2:3351990-3352009 | Msa1044710:CDS | 50.0% |
| !! | GATGACTTGACTCGGAGACT+CGG | + | chr7_2:3351998-3352017 | Msa1044710:CDS | 50.0% |
| ! | GCCAAGTACGCTTCGTTTTC+CGG | + | chr7_2:3352031-3352050 | Msa1044710:CDS | 50.0% |
| CGGAGGAGCAAGTATCAGAT+AGG | - | chr7_2:3352102-3352121 | None:intergenic | 50.0% | |
| GTGATTGAAGATGGAGGAGG+AGG | + | chr7_2:3352221-3352240 | Msa1044710:intron | 50.0% | |
| CTTTGGCGAAGGAAGTTGCT+AGG | + | chr7_2:3352282-3352301 | Msa1044710:CDS | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr7_2:3352561-3352580 | Msa1044710:CDS | 50.0% |
| AGGATGATGCGTTGGATGAG+TGG | + | chr7_2:3352581-3352600 | Msa1044710:CDS | 50.0% | |
| GGTTTGGGCATGTAGAGAGA+AGG | + | chr7_2:3352703-3352722 | Msa1044710:intron | 50.0% | |
| ACTAAGTGAGGTCGGCTACA+TGG | - | chr7_2:3352895-3352914 | None:intergenic | 50.0% | |
| TGTAGCCGACCTCACTTAGT+TGG | + | chr7_2:3352895-3352914 | Msa1044710:intron | 50.0% | |
| CACAGCACCAACATATGGGT+TGG | - | chr7_2:3353041-3353060 | None:intergenic | 50.0% | |
| ! | GCACCGACACTTGAGATTGA+AGG | - | chr7_2:3353091-3353110 | None:intergenic | 50.0% |
| !! | ACGAAGATAGAAGTGCCCGA+TGG | - | chr7_2:3354035-3354054 | None:intergenic | 50.0% |
| CGGGCACTTCTATCTTCGTT+TGG | + | chr7_2:3354036-3354055 | Msa1044710:CDS | 50.0% | |
| CATCCTCACACTCAGATGCA+AGG | + | chr7_2:3354085-3354104 | Msa1044710:CDS | 50.0% | |
| GCAACCTACAGGAGTTGCAA+AGG | + | chr7_2:3354178-3354197 | Msa1044710:CDS | 50.0% | |
| GACAACTTGTGGGCCATGAT+AGG | + | chr7_2:3354214-3354233 | Msa1044710:CDS | 50.0% | |
| GTAGGGCAATCTCCCTATCA+TGG | - | chr7_2:3354230-3354249 | None:intergenic | 50.0% | |
| TTGCCCTACGACAACCACTT+TGG | + | chr7_2:3354241-3354260 | Msa1044710:CDS | 50.0% | |
| TGCCCTACGACAACCACTTT+GGG | + | chr7_2:3354242-3354261 | Msa1044710:CDS | 50.0% | |
| TGCCCAAAGTGGTTGTCGTA+GGG | - | chr7_2:3354247-3354266 | None:intergenic | 50.0% | |
| TTGCCCAAAGTGGTTGTCGT+AGG | - | chr7_2:3354248-3354267 | None:intergenic | 50.0% | |
| !! | CTAGAAGAGGAGAGTGCTAC+AGG | + | chr7_2:3354525-3354544 | Msa1044710:CDS | 50.0% |
| GCCCACAAATCAAGCCAATC+TGG | - | chr7_2:3354711-3354730 | None:intergenic | 50.0% | |
| ! | TAGATGGCGAACAAAGGCAC+TGG | - | chr7_2:3354862-3354881 | None:intergenic | 50.0% |
| AGACGCTAGATGGCGAACAA+AGG | - | chr7_2:3354868-3354887 | None:intergenic | 50.0% | |
| TCCGTTGCCAAGAAGCTGAA+GGG | + | chr7_2:3354991-3355010 | Msa1044710:CDS | 50.0% | |
| ACCCTTCAGCTTCTTGGCAA+CGG | - | chr7_2:3354995-3355014 | None:intergenic | 50.0% | |
| CAGTCAACCCTTCAGCTTCT+TGG | - | chr7_2:3355001-3355020 | None:intergenic | 50.0% | |
| ! | CTTTTTCCTTGAGATGGGGG+TGG | + | chr7_2:3355115-3355134 | Msa1044710:CDS | 50.0% |
| GAGGCCTTGGATTATCTGCA+AGG | + | chr7_2:3355383-3355402 | Msa1044710:CDS | 50.0% | |
| ! | GCAGGGATTTTGTTGGGGTT+TGG | + | chr7_2:3355438-3355457 | Msa1044710:CDS | 50.0% |
| GTTTGGCCGCAGGAATAGAT+CGG | + | chr7_2:3355465-3355484 | Msa1044710:CDS | 50.0% | |
| ! | GCATGGTGTTTGAGACCAGA+AGG | + | chr7_2:3355587-3355606 | Msa1044710:CDS | 50.0% |
| ATGAGTCTCCGGCGATGAAG+TGG | - | chr7_2:3351748-3351767 | None:intergenic | 55.0% | |
| ! | AGGTTTTTCGCCGACGTGTG+CGG | - | chr7_2:3351793-3351812 | None:intergenic | 55.0% |
| AGTGGTTGGAGGCGGTTCAT+CGG | - | chr7_2:3351842-3351861 | None:intergenic | 55.0% | |
| ! | AAGATGGTGGCAGTGGTTGG+AGG | - | chr7_2:3351853-3351872 | None:intergenic | 55.0% |
| ! | GAGAAGATGGTGGCAGTGGT+TGG | - | chr7_2:3351856-3351875 | None:intergenic | 55.0% |
| GTGGAAGTTGTGGTCGAGGA+AGG | - | chr7_2:3351900-3351919 | None:intergenic | 55.0% | |
| !! | ATTGGGAGACTCGGTGAGGA+CGG | - | chr7_2:3351930-3351949 | None:intergenic | 55.0% |
| !! | CGAAATTGGGAGACTCGGTG+AGG | - | chr7_2:3351934-3351953 | None:intergenic | 55.0% |
| GGCGACGAAATTGGGAGACT+CGG | - | chr7_2:3351939-3351958 | None:intergenic | 55.0% | |
| GCCGGAAAACGAAGCGTACT+TGG | - | chr7_2:3352035-3352054 | None:intergenic | 55.0% | |
| CAAACCTTGCACAATGCCGG+AGG | - | chr7_2:3352119-3352138 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGAACGAGAT+GGG | + | chr7_2:3352234-3352253 | Msa1044710:CDS | 55.0% | |
| GGAGGAGAACGAGATGGGAA+AGG | + | chr7_2:3352239-3352258 | Msa1044710:CDS | 55.0% | |
| GGAACTTGCGACTTTGGCGA+AGG | + | chr7_2:3352271-3352290 | Msa1044710:CDS | 55.0% | |
| GGCGAAGGAAGTTGCTAGGT+TGG | + | chr7_2:3352286-3352305 | Msa1044710:CDS | 55.0% | |
| CGGAGATGAGGATGATGCGT+TGG | + | chr7_2:3352573-3352592 | Msa1044710:CDS | 55.0% | |
| CGTTGTGTCAATGTCGTGCC+TGG | - | chr7_2:3352967-3352986 | None:intergenic | 55.0% | |
| CGACATTGACACAACGTCGC+AGG | + | chr7_2:3352971-3352990 | Msa1044710:intron | 55.0% | |
| TCGGCGTGCATGCTTTGTAG+AGG | - | chr7_2:3354120-3354139 | None:intergenic | 55.0% | |
| TGCACGCCGATCATAAGCTC+AGG | + | chr7_2:3354130-3354149 | Msa1044710:CDS | 55.0% | |
| GTCCGTTGCCAAGAAGCTGA+AGG | + | chr7_2:3354990-3355009 | Msa1044710:CDS | 55.0% | |
| GGTGGACGAGGAAGACAAAG+TGG | + | chr7_2:3355133-3355152 | Msa1044710:CDS | 55.0% | |
| GTTTGGAGAAGTTTGGCCGC+AGG | + | chr7_2:3355455-3355474 | Msa1044710:CDS | 55.0% | |
| GTATGACAGGGGGGAAGAGA+TGG | + | chr7_2:3355675-3355694 | Msa1044710:CDS | 55.0% | |
| AGGGGGGAAGAGATGGTTGA+AGG | + | chr7_2:3355682-3355701 | Msa1044710:CDS | 55.0% | |
| TGTGCGGTGTTCGCCAGTGT+AGG | - | chr7_2:3351777-3351796 | None:intergenic | 60.0% | |
| ATGGTGGCAGTGGTTGGAGG+CGG | - | chr7_2:3351850-3351869 | None:intergenic | 60.0% | |
| ! | GAGGAAGGAGAGTGCGGAGT+GGG | - | chr7_2:3351885-3351904 | None:intergenic | 60.0% |
| GTGGTCGAGGAAGGAGAGTG+CGG | - | chr7_2:3351891-3351910 | None:intergenic | 60.0% | |
| CGGTGTGGAAGTTGTGGTCG+AGG | - | chr7_2:3351904-3351923 | None:intergenic | 60.0% | |
| CGGTTGCGGTGTGGAAGTTG+TGG | - | chr7_2:3351910-3351929 | None:intergenic | 60.0% | |
| !! | AGACTCGGTGAGGACGGTTG+CGG | - | chr7_2:3351924-3351943 | None:intergenic | 60.0% |
| !! | CTTGACTCGGAGACTCGGTG+CGG | + | chr7_2:3352003-3352022 | Msa1044710:CDS | 60.0% |
| !! | TTGACTCGGAGACTCGGTGC+GGG | + | chr7_2:3352004-3352023 | Msa1044710:CDS | 60.0% |
| TGCTCCTCCGGCATTGTGCA+AGG | + | chr7_2:3352112-3352131 | Msa1044710:CDS | 60.0% | |
| GGAGGAGGAGGAGAACGAGA+TGG | + | chr7_2:3352233-3352252 | Msa1044710:CDS | 60.0% | |
| CGATGGTCAGCAATCGCCTG+GGG | - | chr7_2:3354018-3354037 | None:intergenic | 60.0% | |
| CCGATGGTCAGCAATCGCCT+GGG | - | chr7_2:3354019-3354038 | None:intergenic | 60.0% | |
| CCCAGGCGATTGCTGACCAT+CGG | + | chr7_2:3354016-3354035 | Msa1044710:CDS | 60.0% | |
| CCAGGCGATTGCTGACCATC+GGG | + | chr7_2:3354017-3354036 | Msa1044710:CDS | 60.0% | |
| GCGGTGTTCGCCAGTGTAGG+AGG | - | chr7_2:3351774-3351793 | None:intergenic | 65.0% | |
| CTGGCGAACACCGCACACGT+CGG | + | chr7_2:3351780-3351799 | Msa1044710:five_prime_UTR | 65.0% | |
| ! | CGAGGAAGGAGAGTGCGGAG+TGG | - | chr7_2:3351886-3351905 | None:intergenic | 65.0% |
| CCCGATGGTCAGCAATCGCC+TGG | - | chr7_2:3354020-3354039 | None:intergenic | 65.0% | |
| CCTCGTCCACCCCCATCTCA+AGG | - | chr7_2:3355124-3355143 | None:intergenic | 65.0% | |
| CCTTGAGATGGGGGTGGACG+AGG | + | chr7_2:3355121-3355140 | Msa1044710:CDS | 65.0% | |
| CGGTGAGGACGGTTGCGGTG+TGG | - | chr7_2:3351919-3351938 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 3351716 | 3355962 | 3351716 | ID=Msa1044710;Name=Msa1044710 |
| chr7_2 | mRNA | 3351716 | 3355962 | 3351716 | ID=Msa1044710-mRNA-1;Parent=Msa1044710;Name=Msa1044710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=126|0.5|0.8|1|1|1|5|187|838 |
| chr7_2 | exon | 3351716 | 3352133 | 3351716 | ID=Msa1044710-mRNA-1:exon:871;Parent=Msa1044710-mRNA-1 |
| chr7_2 | exon | 3352231 | 3352329 | 3352231 | ID=Msa1044710-mRNA-1:exon:872;Parent=Msa1044710-mRNA-1 |
| chr7_2 | exon | 3352483 | 3352602 | 3352483 | ID=Msa1044710-mRNA-1:exon:873;Parent=Msa1044710-mRNA-1 |
| chr7_2 | exon | 3353685 | 3353791 | 3353685 | ID=Msa1044710-mRNA-1:exon:874;Parent=Msa1044710-mRNA-1 |
| chr7_2 | exon | 3353877 | 3355962 | 3353877 | ID=Msa1044710-mRNA-1:exon:875;Parent=Msa1044710-mRNA-1 |
| chr7_2 | five_prime_UTR | 3351716 | 3351841 | 3351716 | ID=Msa1044710-mRNA-1:five_prime_utr;Parent=Msa1044710-mRNA-1 |
| chr7_2 | CDS | 3351842 | 3352133 | 3351842 | ID=Msa1044710-mRNA-1:cds;Parent=Msa1044710-mRNA-1 |
| chr7_2 | CDS | 3352231 | 3352329 | 3352231 | ID=Msa1044710-mRNA-1:cds;Parent=Msa1044710-mRNA-1 |
| chr7_2 | CDS | 3352483 | 3352602 | 3352483 | ID=Msa1044710-mRNA-1:cds;Parent=Msa1044710-mRNA-1 |
| chr7_2 | CDS | 3353685 | 3353791 | 3353685 | ID=Msa1044710-mRNA-1:cds;Parent=Msa1044710-mRNA-1 |
| chr7_2 | CDS | 3353877 | 3355775 | 3353877 | ID=Msa1044710-mRNA-1:cds;Parent=Msa1044710-mRNA-1 |
| chr7_2 | three_prime_UTR | 3355776 | 3355962 | 3355776 | ID=Msa1044710-mRNA-1:three_prime_utr;Parent=Msa1044710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
