Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105650 | XP_003622992.1 | 95.381 | 801 | 34 | 1 | 1 | 798 | 1 | 801 | 0.0 | 1548 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105650 | sp|Q9STU3|MAG2_ARATH | 56.931 | 808 | 324 | 10 | 1 | 797 | 1 | 795 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105650 | G7L2C9 | 95.381 | 801 | 34 | 1 | 1 | 798 | 1 | 801 | 0.0 | 1548 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa1105650 | 0.818006 | 2.455052e-52 | -8.615850e-47 |
| Msa0044090 | Msa1105650 | 0.809486 | 1.848054e-50 | -8.615850e-47 |
| Msa0058600 | Msa1105650 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
| Msa0103770 | Msa1105650 | 0.808141 | 3.583337e-50 | -8.615850e-47 |
| Msa0610880 | Msa1105650 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0615010 | Msa1105650 | 0.814358 | 1.604500e-51 | -8.615850e-47 |
| Msa0661320 | Msa1105650 | 0.806934 | 6.462788e-50 | -8.615850e-47 |
| Msa0681250 | Msa1105650 | 0.827913 | 1.203118e-54 | -8.615850e-47 |
| Msa0681270 | Msa1105650 | 0.814440 | 1.538714e-51 | -8.615850e-47 |
| Msa0685900 | Msa1105650 | 0.803327 | 3.675573e-49 | -8.615850e-47 |
| Msa0708310 | Msa1105650 | 0.800064 | 1.717621e-48 | -8.615850e-47 |
| Msa0731940 | Msa1105650 | 0.806385 | 8.442147e-50 | -8.615850e-47 |
| Msa0733010 | Msa1105650 | 0.805721 | 1.164174e-49 | -8.615850e-47 |
| Msa0756380 | Msa1105650 | 0.810551 | 1.089543e-50 | -8.615850e-47 |
| Msa0763890 | Msa1105650 | 0.803321 | 3.686627e-49 | -8.615850e-47 |
| Msa0763920 | Msa1105650 | 0.805324 | 1.410048e-49 | -8.615850e-47 |
| Msa0797770 | Msa1105650 | 0.803444 | 3.475830e-49 | -8.615850e-47 |
| Msa0808100 | Msa1105650 | 0.817073 | 3.984527e-52 | -8.615850e-47 |
| Msa0835230 | Msa1105650 | 0.805924 | 1.055386e-49 | -8.615850e-47 |
| Msa0183760 | Msa1105650 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0389910 | Msa1105650 | 0.814394 | 1.575657e-51 | -8.615850e-47 |
| Msa0398200 | Msa1105650 | 0.800756 | 1.241079e-48 | -8.615850e-47 |
| Msa0405130 | Msa1105650 | 0.803455 | 3.457018e-49 | -8.615850e-47 |
| Msa0411390 | Msa1105650 | 0.809322 | 2.004141e-50 | -8.615850e-47 |
| Msa0423860 | Msa1105650 | 0.810255 | 1.262562e-50 | -8.615850e-47 |
| Msa0455760 | Msa1105650 | 0.831268 | 1.837958e-55 | -8.615850e-47 |
| Msa1019150 | Msa1105650 | 0.803994 | 2.672166e-49 | -8.615850e-47 |
| Msa1023950 | Msa1105650 | 0.802594 | 5.210336e-49 | -8.615850e-47 |
| Msa1034200 | Msa1105650 | 0.805745 | 1.150781e-49 | -8.615850e-47 |
| Msa1034500 | Msa1105650 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa1036610 | Msa1105650 | 0.804860 | 1.763845e-49 | -8.615850e-47 |
| Msa1044710 | Msa1105650 | 0.953888 | 1.013968e-111 | -8.615850e-47 |
| Msa1047080 | Msa1105650 | 0.800822 | 1.203459e-48 | -8.615850e-47 |
| Msa1063860 | Msa1105650 | 0.809173 | 2.156503e-50 | -8.615850e-47 |
| Msa1066670 | Msa1105650 | 0.819536 | 1.103024e-52 | -8.615850e-47 |
| Msa1105650 | Msa1108070 | 0.801854 | 7.399143e-49 | -8.615850e-47 |
| Msa1105650 | Msa1120740 | 0.800082 | 1.703193e-48 | -8.615850e-47 |
| Msa1105650 | Msa1121490 | 0.805323 | 1.411049e-49 | -8.615850e-47 |
| Msa1105650 | Msa1147740 | 0.836369 | 9.744585e-57 | -8.615850e-47 |
| Msa1105650 | Msa1185110 | 0.808675 | 2.757080e-50 | -8.615850e-47 |
| Msa1105650 | Msa1190920 | 0.803648 | 3.153179e-49 | -8.615850e-47 |
| Msa1105650 | Msa1232740 | 0.800157 | 1.644429e-48 | -8.615850e-47 |
| Msa1105650 | Msa1345810 | 0.807068 | 6.053669e-50 | -8.615850e-47 |
| Msa1105650 | Msa1353470 | 0.819243 | 1.286367e-52 | -8.615850e-47 |
| Msa1105650 | Msa1388970 | 0.806383 | 8.449968e-50 | -8.615850e-47 |
| Msa1105650 | Msa1458770 | 0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0264830 | Msa1105650 | 0.808495 | 3.012222e-50 | -8.615850e-47 |
| Msa0302870 | Msa1105650 | 0.804643 | 1.957878e-49 | -8.615850e-47 |
| Msa0340340 | Msa1105650 | 0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0562660 | Msa1105650 | 0.801535 | 8.600997e-49 | -8.615850e-47 |
| Msa0574600 | Msa1105650 | 0.800444 | 1.437023e-48 | -8.615850e-47 |
| Msa0578920 | Msa1105650 | 0.816584 | 5.128885e-52 | -8.615850e-47 |
| Msa0868160 | Msa1105650 | 0.809745 | 1.625445e-50 | -8.615850e-47 |
| Msa0925270 | Msa1105650 | 0.810979 | 8.802634e-51 | -8.615850e-47 |
| Msa0936390 | Msa1105650 | 0.813738 | 2.199084e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105650 | MtrunA17_Chr7g0237791 | 95.381 | 801 | 34 | 1 | 1 | 798 | 1 | 801 | 0.0 | 1548 |
| Msa1105650 | MtrunA17_Chr3g0093581 | 34.911 | 845 | 472 | 15 | 1 | 794 | 13 | 830 | 1.57e-143 | 443 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1105650 | AT3G47700.1 | 56.931 | 808 | 324 | 10 | 1 | 797 | 1 | 795 | 0.0 | 890 |
| Msa1105650 | AT1G08400.1 | 33.784 | 814 | 488 | 14 | 7 | 793 | 14 | 803 | 3.12e-136 | 423 |
Find 201 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAAAAGCATTTCTCAAAA+TGG | 0.144458 | 7_3:-44397894 | Msa1105650:CDS |
| TAAGACCTTCATTTGTATTA+AGG | 0.197551 | 7_3:+44396579 | None:intergenic |
| TTGAAGCTCGGCGACGAAAT+TGG | 0.205562 | 7_3:+44400190 | None:intergenic |
| ATGTCTTTGGTAGAAAATTC+TGG | 0.217841 | 7_3:-44397577 | Msa1105650:CDS |
| TTACAGTATAAATGTATAAT+TGG | 0.220877 | 7_3:+44396218 | None:intergenic |
| TGTCTCAGATTTGATTTATA+AGG | 0.251979 | 7_3:+44396265 | None:intergenic |
| CAGTCAACCCTTCAGCTTCT+TGG | 0.272422 | 7_3:+44397197 | None:intergenic |
| TGTCTGGTTTCAACTTATCT+AGG | 0.286651 | 7_3:+44397443 | None:intergenic |
| CATTCTTCTGACAAGAATTC+AGG | 0.295124 | 7_3:-44398427 | Msa1105650:CDS |
| TTTAATTAAAGCATCATTAT+CGG | 0.305405 | 7_3:+44397168 | None:intergenic |
| CTATCCCTGTTTGTATTACT+TGG | 0.308601 | 7_3:+44397034 | None:intergenic |
| CGAAAAGCATTTCTCAAAAT+GGG | 0.325990 | 7_3:-44397893 | Msa1105650:CDS |
| ATCGTCAAAGATAACTCTAT+TGG | 0.327826 | 7_3:+44396991 | None:intergenic |
| GACAACTTGTGGGCCATGAT+AGG | 0.329762 | 7_3:-44397981 | Msa1105650:CDS |
| AATCGCCTGGGGTCTTAAAA+TGG | 0.333547 | 7_3:+44398191 | None:intergenic |
| TGAAGCTCGGCGACGAAATT+GGG | 0.334907 | 7_3:+44400191 | None:intergenic |
| GGATTATCTGCAAGGTAAAA+TGG | 0.340226 | 7_3:-44396804 | Msa1105650:CDS |
| ATCCAAAGCAGGTCCTAGTT+TGG | 0.345859 | 7_3:+44400431 | None:intergenic |
| CGGGCACTTCTATCTTCGTT+TGG | 0.346740 | 7_3:-44398159 | Msa1105650:CDS |
| GACCATATCTGGTACATATC+TGG | 0.352728 | 7_3:-44396051 | Msa1105650:three_prime_UTR |
| TTTGACCGCAAAGTAACATT+AGG | 0.355274 | 7_3:+44397283 | None:intergenic |
| CCCGATGGTCAGCAATCGCC+TGG | 0.358363 | 7_3:+44398178 | None:intergenic |
| GAATGATAAATTACAAGAAT+GGG | 0.359895 | 7_3:+44396155 | None:intergenic |
| CGTCTGTTGTTGAACGTTGT+CGG | 0.366079 | 7_3:-44397312 | Msa1105650:CDS |
| TAGAAGAAGGTTTGAATAGC+AGG | 0.370069 | 7_3:-44396775 | Msa1105650:CDS |
| CTTTGCCAAGTATGTGGATA+AGG | 0.373427 | 7_3:+44397720 | None:intergenic |
| TCAAAATTTCTCAGATTAGT+AGG | 0.373897 | 7_3:-44397265 | Msa1105650:CDS |
| CACTTCTATCTTCGTTTGGA+TGG | 0.375462 | 7_3:-44398155 | Msa1105650:CDS |
| ACATTGAAAACGAGAATAAC+TGG | 0.376272 | 7_3:-44397423 | Msa1105650:CDS |
| TTCTTTATTTAGAATATGTC+TGG | 0.379868 | 7_3:-44396294 | Msa1105650:three_prime_UTR |
| GCCCAAACTAGGACCTGCTT+TGG | 0.385286 | 7_3:-44400433 | None:intergenic |
| GCTGACAGAATGACCATATC+TGG | 0.391154 | 7_3:-44396062 | Msa1105650:three_prime_UTR |
| TGCCCTACGACAACCACTTT+GGG | 0.392932 | 7_3:-44397953 | Msa1105650:CDS |
| TAGAGAGGAACTTGCGACTT+TGG | 0.402074 | 7_3:-44399870 | Msa1105650:CDS |
| TGTTGGGGTTTGGAGAAGTT+TGG | 0.403098 | 7_3:-44396747 | Msa1105650:CDS |
| TCCAAAGCAGGTCCTAGTTT+GGG | 0.404018 | 7_3:+44400432 | None:intergenic |
| AAAGTAATGAGCGGCATTGA+TGG | 0.404107 | 7_3:+44397135 | None:intergenic |
| AGAATGATAAATTACAAGAA+TGG | 0.408995 | 7_3:+44396154 | None:intergenic |
| AATGGTGGTGTTGAAAGATT+TGG | 0.410942 | 7_3:-44396665 | Msa1105650:CDS |
| GCCCACAAATCAAGCCAATC+TGG | 0.413204 | 7_3:+44397487 | None:intergenic |
| TGTCTTTGGTAGAAAATTCT+GGG | 0.413222 | 7_3:-44397576 | Msa1105650:CDS |
| GTTGATGAAGCTAAGGTAGT+TGG | 0.414502 | 7_3:-44397784 | Msa1105650:CDS |
| TATTTGGGGTATTTGGGGCA+TGG | 0.416271 | 7_3:-44396625 | Msa1105650:CDS |
| GTCCAGATTGGCTTGATTTG+TGG | 0.416771 | 7_3:-44397489 | Msa1105650:CDS |
| AAGAGATGGTTGAAGGAGAA+TGG | 0.419195 | 7_3:-44396506 | Msa1105650:CDS |
| GTTCAACAACAGACGCTAGA+TGG | 0.420678 | 7_3:+44397320 | None:intergenic |
| TCGGTGAATTTCGATCTTGA+TGG | 0.421407 | 7_3:+44400315 | None:intergenic |
| TAAGACTCTAATAGAGGCCT+TGG | 0.421585 | 7_3:-44396825 | Msa1105650:CDS |
| GTGATTGAAGATGGAGGAGG+AGG | 0.422219 | 7_3:-44399914 | Msa1105650:intron |
| TTGCTGAGATCCATTCTTCT+CGG | 0.422438 | 7_3:+44397752 | None:intergenic |
| CAAAATTGAATTAGTGCAGC+TGG | 0.422554 | 7_3:+44396337 | None:intergenic |
| CTATCTGATACTTGCTCCTC+CGG | 0.424017 | 7_3:-44400035 | Msa1105650:CDS |
| CTAGAAGAGGAGAGTGCTAC+AGG | 0.427850 | 7_3:-44397670 | Msa1105650:CDS |
| TCCAGATTGGCTTGATTTGT+GGG | 0.429751 | 7_3:-44397488 | Msa1105650:CDS |
| TCTTGCTTTGTGCAACCTAC+AGG | 0.433316 | 7_3:-44398028 | Msa1105650:CDS |
| GCTTGTGAATCCCCTATCAT+TGG | 0.433407 | 7_3:-44397920 | Msa1105650:CDS |
| GCCGGAAAACGAAGCGTACT+TGG | 0.434086 | 7_3:+44400103 | None:intergenic |
| ATGTAAGCTACCGAGACATT+TGG | 0.436295 | 7_3:+44396001 | None:intergenic |
| AATTACCAAGTAATACAAAC+AGG | 0.442160 | 7_3:-44397039 | Msa1105650:CDS |
| TTGCCCTACGACAACCACTT+TGG | 0.449787 | 7_3:-44397954 | Msa1105650:CDS |
| GGAAGAGTTTAGAACAGAGT+GGG | 0.454650 | 7_3:-44396954 | Msa1105650:CDS |
| AGAGATGGTTGAAGGAGAAT+GGG | 0.458128 | 7_3:-44396505 | Msa1105650:CDS |
| GAGGAGGAGGAGAACGAGAT+GGG | 0.462087 | 7_3:-44399901 | Msa1105650:CDS |
| CTAGAGCTCGATCTACTCTA+TGG | 0.465212 | 7_3:+44398214 | None:intergenic |
| GGCGAAGGAAGTTGCTAGGT+TGG | 0.466181 | 7_3:-44399849 | Msa1105650:CDS |
| GATATAGTTGCCGAGAAGAA+TGG | 0.466745 | 7_3:-44397762 | Msa1105650:CDS |
| GAGAAGATGGTGGCAGTGGT+TGG | 0.477115 | 7_3:+44400282 | None:intergenic |
| AATTTCCTTTGCCAAGTATG+TGG | 0.478566 | 7_3:+44397714 | None:intergenic |
| CCAGGCGATTGCTGACCATC+GGG | 0.479923 | 7_3:-44398178 | Msa1105650:CDS |
| GAGACTGTTCGTGTTTATGC+AGG | 0.480117 | 7_3:-44399827 | Msa1105650:intron |
| ATACAAGATTCTTCCATTGA+GGG | 0.485028 | 7_3:+44398247 | None:intergenic |
| TTCTTGGCAACGGACTAGTA+TGG | 0.488514 | 7_3:+44397213 | None:intergenic |
| AGGTCTTAAATTGTTGAAGA+TGG | 0.489331 | 7_3:-44396564 | Msa1105650:CDS |
| GCATGTTCCAACGCTTAAGC+TGG | 0.491747 | 7_3:+44396083 | None:intergenic |
| ATTCAAACCTTGCACAATGC+CGG | 0.492109 | 7_3:+44400016 | None:intergenic |
| TACAGGAGTTGCAAAGGAAA+AGG | 0.495284 | 7_3:-44398011 | Msa1105650:CDS |
| TGCTCCTCCGGCATTGTGCA+AGG | 0.497475 | 7_3:-44400023 | Msa1105650:intron |
| CCCAGGCGATTGCTGACCAT+CGG | 0.500211 | 7_3:-44398179 | Msa1105650:CDS |
| TTACAAATATACACCCTCAA+TGG | 0.500452 | 7_3:-44398260 | Msa1105650:CDS |
| GGAGGAGAACGAGATGGGAA+AGG | 0.501978 | 7_3:-44399896 | Msa1105650:CDS |
| ACCCTTCAGCTTCTTGGCAA+CGG | 0.502614 | 7_3:+44397203 | None:intergenic |
| GGAGGAGGAGGAGAACGAGA+TGG | 0.503496 | 7_3:-44399902 | Msa1105650:CDS |
| TACCAGATATGTACCAGATA+TGG | 0.504435 | 7_3:+44396049 | None:intergenic |
| TCTAGTTGAGTAATATAACT+AGG | 0.505368 | 7_3:+44397688 | None:intergenic |
| TCAAACTCAGTGCTCTGAGT+TGG | 0.506088 | 7_3:-44400171 | Msa1105650:CDS |
| GAGGAAGGAGAGTGCGGAGT+GGG | 0.507496 | 7_3:+44400253 | None:intergenic |
| CATTGCCTAATGTTACTTTG+CGG | 0.507993 | 7_3:-44397288 | Msa1105650:CDS |
| ATGTTAAAGCAGAAAGAGGT+GGG | 0.508260 | 7_3:+44398130 | None:intergenic |
| GATACAAGATTCTTCCATTG+AGG | 0.508563 | 7_3:+44398246 | None:intergenic |
| AGAGTGCAAGAATGTATGAC+AGG | 0.512178 | 7_3:-44396533 | Msa1105650:CDS |
| GGCAAAAGAGTGAAGAAGGT+TGG | 0.513621 | 7_3:-44396856 | Msa1105650:CDS |
| AGAAGAAGGTTTGAATAGCA+GGG | 0.514841 | 7_3:-44396774 | Msa1105650:CDS |
| GTCTGGTTTCAACTTATCTA+GGG | 0.515344 | 7_3:+44397444 | None:intergenic |
| AGTGGTTGGAGGCGGTTCAT+CGG | 0.516184 | 7_3:+44400296 | None:intergenic |
| ATAACTCTATTGGAACTCTC+TGG | 0.516382 | 7_3:+44397001 | None:intergenic |
| TGACGATGAAATCAAACAGT+TGG | 0.517533 | 7_3:-44396975 | Msa1105650:CDS |
| AGATGAGAAGATGGTGGCAG+TGG | 0.519610 | 7_3:+44400278 | None:intergenic |
| ACAACTTGTGGGCCATGATA+GGG | 0.522346 | 7_3:-44397980 | Msa1105650:CDS |
| CGGAGGAGCAAGTATCAGAT+AGG | 0.523459 | 7_3:+44400036 | None:intergenic |
| AAGGAAATCTAGACAACTTG+TGG | 0.524555 | 7_3:-44397992 | Msa1105650:CDS |
| GCCATTGGTTGATGAAGCTA+AGG | 0.532397 | 7_3:-44397791 | Msa1105650:CDS |
| CTTTGGCGAAGGAAGTTGCT+AGG | 0.533591 | 7_3:-44399853 | Msa1105650:CDS |
| GGATGAAATGTTACAGCCAT+TGG | 0.534713 | 7_3:-44397806 | Msa1105650:CDS |
| CAATGGCAAAAGAGTGAAGA+AGG | 0.536128 | 7_3:-44396860 | Msa1105650:CDS |
| AACCTCCTTATCCACATACT+TGG | 0.537532 | 7_3:-44397725 | Msa1105650:CDS |
| CACTTGTGTATAAGATCACA+AGG | 0.541663 | 7_3:-44397846 | Msa1105650:CDS |
| AAAATGGCAGTGGTAGAAGA+AGG | 0.544752 | 7_3:-44396788 | Msa1105650:CDS |
| GTGGAAGTTGTGGTCGAGGA+AGG | 0.545615 | 7_3:+44400238 | None:intergenic |
| TGGAAGAGTTTAGAACAGAG+TGG | 0.546053 | 7_3:-44396955 | Msa1105650:CDS |
| TGTTTGGGTTGATCCAAAGC+AGG | 0.546104 | 7_3:+44400420 | None:intergenic |
| ATTGGGAGACTCGGTGAGGA+CGG | 0.546342 | 7_3:+44400208 | None:intergenic |
| GCATGGTGTTTGAGACCAGA+AGG | 0.546622 | 7_3:-44396608 | Msa1105650:CDS |
| CTAGTTGAGTAATATAACTA+GGG | 0.547904 | 7_3:+44397689 | None:intergenic |
| TGAGTACCTGAGCTTATGAT+CGG | 0.548327 | 7_3:+44398059 | None:intergenic |
| AGCACTGAAACTTGATACAT+TGG | 0.548488 | 7_3:-44398506 | Msa1105650:CDS |
| AAGATGGTGGCAGTGGTTGG+AGG | 0.548930 | 7_3:+44400285 | None:intergenic |
| ATGGTGGCAGTGGTTGGAGG+CGG | 0.549716 | 7_3:+44400288 | None:intergenic |
| AACGAAAACCACTTCATCGC+CGG | 0.550143 | 7_3:-44400398 | Msa1105650:intron |
| GTAGGGCAATCTCCCTATCA+TGG | 0.551255 | 7_3:+44397968 | None:intergenic |
| TGCCCAAAGTGGTTGTCGTA+GGG | 0.552626 | 7_3:+44397951 | None:intergenic |
| AGTCAGCTTCTAGAATATCA+TGG | 0.553240 | 7_3:-44397642 | Msa1105650:CDS |
| AGCTCTTCAATTGCCCAAAG+TGG | 0.554177 | 7_3:+44397940 | None:intergenic |
| GAGTGGGAGAGATGAGAAGA+TGG | 0.557357 | 7_3:+44400269 | None:intergenic |
| TTATATTACTCAACTAGAAG+AGG | 0.559261 | 7_3:-44397683 | Msa1105650:CDS |
| ATGAGTCTCCGGCGATGAAG+TGG | 0.560794 | 7_3:+44400390 | None:intergenic |
| ACACAATCCTCACGGGCTCA+TGG | 0.561322 | 7_3:+44396190 | None:intergenic |
| TGGGAGAGATGAGAAGATGG+TGG | 0.561778 | 7_3:+44400272 | None:intergenic |
| AGACTCGGTGAGGACGGTTG+CGG | 0.564000 | 7_3:+44400214 | None:intergenic |
| GTTTGGAGAAGTTTGGCCGC+AGG | 0.564600 | 7_3:-44396740 | Msa1105650:CDS |
| TTTACCTTGCAGATAATCCA+AGG | 0.565920 | 7_3:+44396808 | None:intergenic |
| GTTTGGCCGCAGGAATAGAT+CGG | 0.566954 | 7_3:-44396730 | Msa1105650:CDS |
| CGGTGTGGAAGTTGTGGTCG+AGG | 0.567563 | 7_3:+44400234 | None:intergenic |
| GGAACTTGCGACTTTGGCGA+AGG | 0.569345 | 7_3:-44399864 | Msa1105650:CDS |
| TTGCCCAAAGTGGTTGTCGT+AGG | 0.570072 | 7_3:+44397950 | None:intergenic |
| GATGACTTGACTCGGAGACT+CGG | 0.575782 | 7_3:-44400137 | Msa1105650:CDS |
| TCGATCTTGATGGTTGCAGA+AGG | 0.576173 | 7_3:+44400325 | None:intergenic |
| GAGGATGTTAAAGCAGAAAG+AGG | 0.576740 | 7_3:+44398126 | None:intergenic |
| TGCACGCCGATCATAAGCTC+AGG | 0.581754 | 7_3:-44398065 | Msa1105650:CDS |
| GTCCGTTGCCAAGAAGCTGA+AGG | 0.583857 | 7_3:-44397205 | Msa1105650:CDS |
| GCTAAACATTCCAAATGTCT+CGG | 0.583881 | 7_3:-44396011 | Msa1105650:three_prime_UTR |
| TGATAGTCCAGCTTAAGCGT+TGG | 0.586376 | 7_3:-44396090 | Msa1105650:three_prime_UTR |
| GATGTTAAAGCAGAAAGAGG+TGG | 0.589340 | 7_3:+44398129 | None:intergenic |
| AATGATAAATTACAAGAATG+GGG | 0.590235 | 7_3:+44396156 | None:intergenic |
| CGGTGAGGACGGTTGCGGTG+TGG | 0.593025 | 7_3:+44400219 | None:intergenic |
| GTTAAAGCAGAAAGAGGTGG+GGG | 0.596451 | 7_3:+44398132 | None:intergenic |
| GGCGACGAAATTGGGAGACT+CGG | 0.601597 | 7_3:+44400199 | None:intergenic |
| TTGTGGGCAGAAATAGAGCT+AGG | 0.601692 | 7_3:-44397472 | Msa1105650:CDS |
| CGGTTGCGGTGTGGAAGTTG+TGG | 0.602205 | 7_3:+44400228 | None:intergenic |
| TGAATTTGACACCATCGAAG+AGG | 0.602211 | 7_3:+44400069 | None:intergenic |
| AGGAAATCTAGACAACTTGT+GGG | 0.602912 | 7_3:-44397991 | Msa1105650:CDS |
| TCTGCAAGGTAAAATGGCAG+TGG | 0.603888 | 7_3:-44396798 | Msa1105650:CDS |
| TTGACTCGGAGACTCGGTGC+GGG | 0.603915 | 7_3:-44400131 | Msa1105650:CDS |
| CTGAAACTTGATACATTGGT+TGG | 0.605977 | 7_3:-44398502 | Msa1105650:CDS |
| TGAAAGATTTGGTAATGACC+TGG | 0.606688 | 7_3:-44396654 | Msa1105650:CDS |
| TCCGTTGCCAAGAAGCTGAA+GGG | 0.607810 | 7_3:-44397204 | Msa1105650:CDS |
| CTTATCCACATACTTGGCAA+AGG | 0.607937 | 7_3:-44397719 | Msa1105650:CDS |
| ATACCCCAAATAAAACATCC+AGG | 0.608098 | 7_3:+44396636 | None:intergenic |
| GAAGAGGCTATGAATTTCGC+CGG | 0.609775 | 7_3:+44400085 | None:intergenic |
| GGTGGACGAGGAAGACAAAG+TGG | 0.613092 | 7_3:-44397062 | Msa1105650:CDS |
| TGCCAAGTATGTGGATAAGG+AGG | 0.616081 | 7_3:+44397723 | None:intergenic |
| AGATGCTGTATCGTATACCA+TGG | 0.616542 | 7_3:-44398470 | Msa1105650:CDS |
| AGTGTCTAAGACTCTAATAG+AGG | 0.621244 | 7_3:-44396831 | Msa1105650:CDS |
| GAGGCCTTGGATTATCTGCA+AGG | 0.622045 | 7_3:-44396812 | Msa1105650:CDS |
| ACCTTAGCTTCATCAACCAA+TGG | 0.622207 | 7_3:+44397790 | None:intergenic |
| TCGGCGTGCATGCTTTGTAG+AGG | 0.622806 | 7_3:+44398078 | None:intergenic |
| TAGATGGCGAACAAAGGCAC+TGG | 0.624826 | 7_3:+44397336 | None:intergenic |
| CGAGGAAGGAGAGTGCGGAG+TGG | 0.626318 | 7_3:+44400252 | None:intergenic |
| CATCCTCACACTCAGATGCA+AGG | 0.626874 | 7_3:-44398110 | Msa1105650:CDS |
| ATACAAACAGGGATAGTGAA+GGG | 0.627122 | 7_3:-44397027 | Msa1105650:CDS |
| GCAACCTACAGGAGTTGCAA+AGG | 0.628607 | 7_3:-44398017 | Msa1105650:CDS |
| AATACAAACAGGGATAGTGA+AGG | 0.628952 | 7_3:-44397028 | Msa1105650:CDS |
| CGATGGTCAGCAATCGCCTG+GGG | 0.630235 | 7_3:+44398180 | None:intergenic |
| GTGGTCGAGGAAGGAGAGTG+CGG | 0.631459 | 7_3:+44400247 | None:intergenic |
| AGACGCTAGATGGCGAACAA+AGG | 0.631692 | 7_3:+44397330 | None:intergenic |
| GAGTGCAAGAATGTATGACA+GGG | 0.635024 | 7_3:-44396532 | Msa1105650:CDS |
| GTGCAAGAATGTATGACAGG+GGG | 0.636256 | 7_3:-44396530 | Msa1105650:CDS |
| TTTGTGATTGAAGATGGAGG+AGG | 0.636897 | 7_3:-44399917 | Msa1105650:intron |
| AACAGATTCAAAGTAATGAG+CGG | 0.639272 | 7_3:+44397126 | None:intergenic |
| GATGCTGTATCGTATACCAT+GGG | 0.640474 | 7_3:-44398469 | Msa1105650:CDS |
| GAAATTCATAGCCTCTTCGA+TGG | 0.641388 | 7_3:-44400080 | Msa1105650:CDS |
| TGTTAAAGCAGAAAGAGGTG+GGG | 0.643097 | 7_3:+44398131 | None:intergenic |
| AGAAGAATGGATCTCAGCAA+TGG | 0.644706 | 7_3:-44397749 | Msa1105650:CDS |
| AAGCTATCATCAAGTCAATG+AGG | 0.646451 | 7_3:+44397614 | None:intergenic |
| GCGCTCTTGATGACTTGACT+CGG | 0.647194 | 7_3:-44400145 | Msa1105650:CDS |
| AGGACGTGTGAAAATGTAGA+GGG | 0.662713 | 7_3:-44396373 | Msa1105650:three_prime_UTR |
| AAGGACGTGTGAAAATGTAG+AGG | 0.663231 | 7_3:-44396374 | Msa1105650:three_prime_UTR |
| AAATTTGCCATGAGCCCGTG+AGG | 0.675485 | 7_3:-44396197 | Msa1105650:three_prime_UTR |
| ACAAAGGCACTGGAAACTAG+AGG | 0.680177 | 7_3:+44397346 | None:intergenic |
| TGCAAGAATGTATGACAGGG+GGG | 0.681015 | 7_3:-44396529 | Msa1105650:CDS |
| CAAACCTTGCACAATGCCGG+AGG | 0.683818 | 7_3:+44400019 | None:intergenic |
| AAGGGATTATGTTGACTCTG+TGG | 0.686990 | 7_3:-44397827 | Msa1105650:CDS |
| AATCCTTGCATCTGAGTGTG+AGG | 0.694787 | 7_3:+44398107 | None:intergenic |
| CTTGACTCGGAGACTCGGTG+CGG | 0.694872 | 7_3:-44400132 | Msa1105650:CDS |
| AATTAACCGATCTATTCCTG+CGG | 0.698953 | 7_3:+44396724 | None:intergenic |
| AGAGCACTGAGTTTGAAGCT+CGG | 0.705028 | 7_3:+44400178 | None:intergenic |
| TGCAGAGTAGAGATTGCACA+AGG | 0.707590 | 7_3:-44396393 | Msa1105650:three_prime_UTR |
| ACGAAGATAGAAGTGCCCGA+TGG | 0.710927 | 7_3:+44398163 | None:intergenic |
| CGAAATTGGGAGACTCGGTG+AGG | 0.718197 | 7_3:+44400204 | None:intergenic |
| ATTACCAAGTAATACAAACA+GGG | 0.720880 | 7_3:-44397038 | Msa1105650:CDS |
| AGTGCAAGAATGTATGACAG+GGG | 0.726480 | 7_3:-44396531 | Msa1105650:CDS |
| ACTTGTGTATAAGATCACAA+GGG | 0.757277 | 7_3:-44397845 | Msa1105650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTCTTAAAGAAA+TGG | - | chr7_3:44397467-44397486 | Msa1105650:CDS | 10.0% |
| !!! | ATTTGAAGATTTTTGATTTT+AGG | - | chr7_3:44396438-44396457 | Msa1105650:exon | 15.0% |
| !!! | TGTAAATTTCAACAATATTT+TGG | - | chr7_3:44397510-44397529 | Msa1105650:CDS | 15.0% |
| !!! | GTAAATTTCAACAATATTTT+GGG | - | chr7_3:44397511-44397530 | Msa1105650:CDS | 15.0% |
| !!! | TATATTTTCTTATAGATAGA+TGG | - | chr7_3:44397667-44397686 | Msa1105650:CDS | 15.0% |
| !!! | TCAGAAAATTTTCTTATAAT+AGG | + | chr7_3:44399187-44399206 | None:intergenic | 15.0% |
| !!! | TTTAATTAAAGCATCATTAT+CGG | + | chr7_3:44399257-44399276 | None:intergenic | 15.0% |
| !! | TTACAGTATAAATGTATAAT+TGG | + | chr7_3:44400207-44400226 | None:intergenic | 15.0% |
| !! | TATCTTTGTAATGATTTCTT+TGG | - | chr7_3:44397416-44397435 | Msa1105650:CDS | 20.0% |
| !! | ATCTTAGCATTTCTTTATAA+TGG | + | chr7_3:44397569-44397588 | None:intergenic | 20.0% |
| !! | TCAATAGTAGTTATATTCTT+AGG | - | chr7_3:44397592-44397611 | Msa1105650:CDS | 20.0% |
| !! | TGTAAATTCGAACAATATTT+AGG | - | chr7_3:44397712-44397731 | Msa1105650:CDS | 20.0% |
| !! | GTAAATTCGAACAATATTTA+GGG | - | chr7_3:44397713-44397732 | Msa1105650:CDS | 20.0% |
| !! | AACATTTGAAGATACATTAA+GGG | + | chr7_3:44398080-44398099 | None:intergenic | 20.0% |
| !! | ACAAGTGTAAAAATAAATTC+TGG | + | chr7_3:44398563-44398582 | None:intergenic | 20.0% |
| !!! | TTGAATCTGTTTTAAATGAA+TGG | - | chr7_3:44399308-44399327 | Msa1105650:intron | 20.0% |
| !!! | ATAGATCGGTTAATTTTTAA+TGG | - | chr7_3:44399706-44399725 | Msa1105650:intron | 20.0% |
| !!! | TAGATCGGTTAATTTTTAAT+GGG | - | chr7_3:44399707-44399726 | Msa1105650:intron | 20.0% |
| !!! | AGCAATGCAAAATTTTATAA+TGG | - | chr7_3:44399739-44399758 | Msa1105650:intron | 20.0% |
| !!! | AATGCAAAATTTTATAATGG+TGG | - | chr7_3:44399742-44399761 | Msa1105650:intron | 20.0% |
| !!! | TTTTTCCTTAATACAAATGA+AGG | - | chr7_3:44399838-44399857 | Msa1105650:CDS | 20.0% |
| !!! | TTCTTTATTTAGAATATGTC+TGG | - | chr7_3:44400128-44400147 | Msa1105650:CDS | 20.0% |
| !! | AATGATAAATTACAAGAATG+GGG | + | chr7_3:44400269-44400288 | None:intergenic | 20.0% |
| !! | GAATGATAAATTACAAGAAT+GGG | + | chr7_3:44400270-44400289 | None:intergenic | 20.0% |
| !! | AGAATGATAAATTACAAGAA+TGG | + | chr7_3:44400271-44400290 | None:intergenic | 20.0% |
| !!! | AATTTATCATTCTTTTGAAC+TGG | - | chr7_3:44400278-44400297 | Msa1105650:CDS | 20.0% |
| !!! | TTTGTTTTTGTGATTGAAGA+TGG | - | chr7_3:44396499-44396518 | Msa1105650:CDS | 25.0% |
| !!! | TTTTGTTTTTGTGCTTGAAT+TGG | - | chr7_3:44396623-44396642 | Msa1105650:CDS | 25.0% |
| !! | AAATCACAGAACATTTTAGA+GGG | - | chr7_3:44396693-44396712 | Msa1105650:CDS | 25.0% |
| !! | TTATTTATGAAGCATTCGAT+AGG | - | chr7_3:44396758-44396777 | Msa1105650:CDS | 25.0% |
| ! | TAGAAAAGATGGTAGAAAAT+AGG | - | chr7_3:44396960-44396979 | Msa1105650:CDS | 25.0% |
| !! | GTTCTATTTGAAACCATATT+TGG | + | chr7_3:44397141-44397160 | None:intergenic | 25.0% |
| !!! | TTGTTATTTATGAAGCATAG+AGG | - | chr7_3:44397225-44397244 | Msa1105650:CDS | 25.0% |
| ! | GAAAACAAACATATCTATCA+TGG | + | chr7_3:44397352-44397371 | None:intergenic | 25.0% |
| ! | ATTCTTAGGTATGATTTCTT+TGG | - | chr7_3:44397606-44397625 | Msa1105650:CDS | 25.0% |
| ! | TAATCTGAATCTGATGATAT+TGG | - | chr7_3:44398034-44398053 | Msa1105650:CDS | 25.0% |
| ! | AATCTGAATCTGATGATATT+GGG | - | chr7_3:44398035-44398054 | Msa1105650:CDS | 25.0% |
| ! | ATACATTAAGGGATATAGTA+CGG | + | chr7_3:44398069-44398088 | None:intergenic | 25.0% |
| ! | CAACATTTGAAGATACATTA+AGG | + | chr7_3:44398081-44398100 | None:intergenic | 25.0% |
| ! | CTAGTTGAGTAATATAACTA+GGG | + | chr7_3:44398736-44398755 | None:intergenic | 25.0% |
| ! | TCTAGTTGAGTAATATAACT+AGG | + | chr7_3:44398737-44398756 | None:intergenic | 25.0% |
| ! | TTATATTACTCAACTAGAAG+AGG | - | chr7_3:44398739-44398758 | Msa1105650:intron | 25.0% |
| ! | TGACAAAAAGATTATGTCTT+TGG | - | chr7_3:44398832-44398851 | Msa1105650:intron | 25.0% |
| ! | TCAAAATTTCTCAGATTAGT+AGG | - | chr7_3:44399157-44399176 | Msa1105650:intron | 25.0% |
| ! | AATTACCAAGTAATACAAAC+AGG | - | chr7_3:44399383-44399402 | Msa1105650:intron | 25.0% |
| ! | ATTACCAAGTAATACAAACA+GGG | - | chr7_3:44399384-44399403 | Msa1105650:intron | 25.0% |
| ! | ATTTGAAGAACAAAAAGCAA+TGG | - | chr7_3:44399545-44399564 | Msa1105650:intron | 25.0% |
| !!! | ATGTTTTATTTGGGGTATTT+GGG | - | chr7_3:44399791-44399810 | Msa1105650:intron | 25.0% |
| ! | TAAGACCTTCATTTGTATTA+AGG | + | chr7_3:44399846-44399865 | None:intergenic | 25.0% |
| !! | TGTCTCAGATTTGATTTATA+AGG | + | chr7_3:44400160-44400179 | None:intergenic | 25.0% |
| !! | TTTGAATTTTGTGATCAAAC+TGG | - | chr7_3:44400303-44400322 | Msa1105650:exon | 25.0% |
| !! | TTGAATTTTGTGATCAAACT+GGG | - | chr7_3:44400304-44400323 | Msa1105650:exon | 25.0% |
| ! | CAAATCACAGAACATTTTAG+AGG | - | chr7_3:44396692-44396711 | Msa1105650:CDS | 30.0% |
| !! | AATCACAGAACATTTTAGAG+GGG | - | chr7_3:44396694-44396713 | Msa1105650:CDS | 30.0% |
| !!! | CGCTTACTTTATTTTTGTGT+TGG | + | chr7_3:44396837-44396856 | None:intergenic | 30.0% |
| CAAAAATAAAGTAAGCGTAG+CGG | - | chr7_3:44396840-44396859 | Msa1105650:CDS | 30.0% | |
| ! | TCTACCATCTTTTCTACTAT+AGG | + | chr7_3:44396956-44396975 | None:intergenic | 30.0% |
| ! | AAAATAGGCTTAGTTGGTTT+GGG | - | chr7_3:44396975-44396994 | Msa1105650:CDS | 30.0% |
| AACTATTCAGAAAGAATCAG+AGG | - | chr7_3:44397101-44397120 | Msa1105650:CDS | 30.0% | |
| CTTGAGACTTGACATAAAAA+GGG | + | chr7_3:44397637-44397656 | None:intergenic | 30.0% | |
| ACTTGAGACTTGACATAAAA+AGG | + | chr7_3:44397638-44397657 | None:intergenic | 30.0% | |
| ! | TCTTTTCATGATGAGTTTGT+TGG | - | chr7_3:44397778-44397797 | Msa1105650:CDS | 30.0% |
| !! | CTTTTCATGATGAGTTTGTT+GGG | - | chr7_3:44397779-44397798 | Msa1105650:CDS | 30.0% |
| ! | GGGATTATCAAGAAAAGTTT+TGG | - | chr7_3:44397799-44397818 | Msa1105650:CDS | 30.0% |
| AATTGTTACCATACTGCATT+TGG | - | chr7_3:44397831-44397850 | Msa1105650:CDS | 30.0% | |
| AAATCAAACCAAATGCAGTA+TGG | + | chr7_3:44397842-44397861 | None:intergenic | 30.0% | |
| !! | TGCATTTGGTTTGATTTCTT+AGG | - | chr7_3:44397845-44397864 | Msa1105650:CDS | 30.0% |
| !! | AGGACTTTTAAGAAGCTAAA+AGG | + | chr7_3:44397877-44397896 | None:intergenic | 30.0% |
| !! | CCTTATGTTTTTATTACCCA+TGG | + | chr7_3:44397972-44397991 | None:intergenic | 30.0% |
| CCATGGGTAATAAAAACATA+AGG | - | chr7_3:44397969-44397988 | Msa1105650:CDS | 30.0% | |
| AATGTATCTTCAAATGTTGC+AGG | - | chr7_3:44398082-44398101 | Msa1105650:CDS | 30.0% | |
| TTACAAATATACACCCTCAA+TGG | - | chr7_3:44398162-44398181 | Msa1105650:CDS | 30.0% | |
| ATACAAGATTCTTCCATTGA+GGG | + | chr7_3:44398178-44398197 | None:intergenic | 30.0% | |
| !! | CCATTTTGAGAAATGCTTTT+CGG | + | chr7_3:44398531-44398550 | None:intergenic | 30.0% |
| !! | CGAAAAGCATTTCTCAAAAT+GGG | - | chr7_3:44398529-44398548 | Msa1105650:intron | 30.0% |
| ACTTGTGTATAAGATCACAA+GGG | - | chr7_3:44398577-44398596 | Msa1105650:intron | 30.0% | |
| ATGTCTTTGGTAGAAAATTC+TGG | - | chr7_3:44398845-44398864 | Msa1105650:intron | 30.0% | |
| TGTCTTTGGTAGAAAATTCT+GGG | - | chr7_3:44398846-44398865 | Msa1105650:intron | 30.0% | |
| ! | TTATTCTCGTTTTCAATGTC+TGG | + | chr7_3:44398998-44399017 | None:intergenic | 30.0% |
| ACATTGAAAACGAGAATAAC+TGG | - | chr7_3:44398999-44399018 | Msa1105650:intron | 30.0% | |
| AACAGATTCAAAGTAATGAG+CGG | + | chr7_3:44399299-44399318 | None:intergenic | 30.0% | |
| ATCGTCAAAGATAACTCTAT+TGG | + | chr7_3:44399434-44399453 | None:intergenic | 30.0% | |
| !!! | ATAGCTGTAGTTATTTTGAG+AGG | - | chr7_3:44399499-44399518 | Msa1105650:intron | 30.0% |
| !! | AATGACCTGGATGTTTTATT+TGG | - | chr7_3:44399781-44399800 | Msa1105650:intron | 30.0% |
| !!! | ATGACCTGGATGTTTTATTT+GGG | - | chr7_3:44399782-44399801 | Msa1105650:intron | 30.0% |
| !!! | GATGTTTTATTTGGGGTATT+TGG | - | chr7_3:44399790-44399809 | Msa1105650:intron | 30.0% |
| !!! | TGTTTTATTTGGGGTATTTG+GGG | - | chr7_3:44399792-44399811 | Msa1105650:intron | 30.0% |
| GTATTAAGGAAAAAACCTTC+TGG | + | chr7_3:44399832-44399851 | None:intergenic | 30.0% | |
| AGGTCTTAAATTGTTGAAGA+TGG | - | chr7_3:44399858-44399877 | Msa1105650:CDS | 30.0% | |
| !! | ATAGTTTTACACAATCCTCA+CGG | + | chr7_3:44400243-44400262 | None:intergenic | 30.0% |
| ! | TGAAGTGGTTTTCGTTGTTT+GGG | + | chr7_3:44396020-44396039 | None:intergenic | 35.0% |
| ! | ATGAAGTGGTTTTCGTTGTT+TGG | + | chr7_3:44396021-44396040 | None:intergenic | 35.0% |
| ! | GTTTTTGTGATTGAAGATGG+AGG | - | chr7_3:44396502-44396521 | Msa1105650:CDS | 35.0% |
| !! | ATCACAGAACATTTTAGAGG+GGG | - | chr7_3:44396695-44396714 | Msa1105650:CDS | 35.0% |
| TTTAGAGGGGGAAAAATGAA+AGG | - | chr7_3:44396707-44396726 | Msa1105650:CDS | 35.0% | |
| TGGTAGAAAATAGGCTTAGT+TGG | - | chr7_3:44396969-44396988 | Msa1105650:CDS | 35.0% | |
| GAAAATAGGCTTAGTTGGTT+TGG | - | chr7_3:44396974-44396993 | Msa1105650:CDS | 35.0% | |
| TCTTCGTACTACAACATCAT+TGG | + | chr7_3:44397016-44397035 | None:intergenic | 35.0% | |
| AGTACGAAGAGTAGATTAGA+TGG | - | chr7_3:44397026-44397045 | Msa1105650:CDS | 35.0% | |
| ! | TAACGAGTTGGATCCAAATA+TGG | - | chr7_3:44397125-44397144 | Msa1105650:CDS | 35.0% |
| ! | AAGTCTTATCCAACTAAGTG+AGG | + | chr7_3:44397194-44397213 | None:intergenic | 35.0% |
| ! | AGCACTGAAACTTGATACAT+TGG | - | chr7_3:44397916-44397935 | Msa1105650:CDS | 35.0% |
| CTGAAACTTGATACATTGGT+TGG | - | chr7_3:44397920-44397939 | Msa1105650:CDS | 35.0% | |
| CATTCTTCTGACAAGAATTC+AGG | - | chr7_3:44397995-44398014 | Msa1105650:CDS | 35.0% | |
| GATACAAGATTCTTCCATTG+AGG | + | chr7_3:44398179-44398198 | None:intergenic | 35.0% | |
| ATGTTAAAGCAGAAAGAGGT+GGG | + | chr7_3:44398295-44398314 | None:intergenic | 35.0% | |
| AAGGAAATCTAGACAACTTG+TGG | - | chr7_3:44398430-44398449 | Msa1105650:CDS | 35.0% | |
| AGGAAATCTAGACAACTTGT+GGG | - | chr7_3:44398431-44398450 | Msa1105650:CDS | 35.0% | |
| !! | CCGAAAAGCATTTCTCAAAA+TGG | - | chr7_3:44398528-44398547 | Msa1105650:intron | 35.0% |
| CACTTGTGTATAAGATCACA+AGG | - | chr7_3:44398576-44398595 | Msa1105650:intron | 35.0% | |
| AATTTCCTTTGCCAAGTATG+TGG | + | chr7_3:44398711-44398730 | None:intergenic | 35.0% | |
| !! | AGTCAGCTTCTAGAATATCA+TGG | - | chr7_3:44398780-44398799 | Msa1105650:intron | 35.0% |
| AAGCTATCATCAAGTCAATG+AGG | + | chr7_3:44398811-44398830 | None:intergenic | 35.0% | |
| ! | TATTTTGTGATCGTCCAGAT+TGG | - | chr7_3:44398921-44398940 | Msa1105650:intron | 35.0% |
| ! | GTCTGGTTTCAACTTATCTA+GGG | + | chr7_3:44398981-44399000 | None:intergenic | 35.0% |
| ! | TGTCTGGTTTCAACTTATCT+AGG | + | chr7_3:44398982-44399001 | None:intergenic | 35.0% |
| !! | CATTGCCTAATGTTACTTTG+CGG | - | chr7_3:44399134-44399153 | Msa1105650:intron | 35.0% |
| TTTGACCGCAAAGTAACATT+AGG | + | chr7_3:44399142-44399161 | None:intergenic | 35.0% | |
| ! | AGATGTCTTTTTCCTTGAGA+TGG | - | chr7_3:44399336-44399355 | Msa1105650:intron | 35.0% |
| ! | GATGTCTTTTTCCTTGAGAT+GGG | - | chr7_3:44399337-44399356 | Msa1105650:intron | 35.0% |
| ! | ATGTCTTTTTCCTTGAGATG+GGG | - | chr7_3:44399338-44399357 | Msa1105650:intron | 35.0% |
| CTATCCCTGTTTGTATTACT+TGG | + | chr7_3:44399391-44399410 | None:intergenic | 35.0% | |
| AATACAAACAGGGATAGTGA+AGG | - | chr7_3:44399394-44399413 | Msa1105650:intron | 35.0% | |
| ATACAAACAGGGATAGTGAA+GGG | - | chr7_3:44399395-44399414 | Msa1105650:intron | 35.0% | |
| ATAACTCTATTGGAACTCTC+TGG | + | chr7_3:44399424-44399443 | None:intergenic | 35.0% | |
| TGACGATGAAATCAAACAGT+TGG | - | chr7_3:44399447-44399466 | Msa1105650:intron | 35.0% | |
| ! | AGTGTCTAAGACTCTAATAG+AGG | - | chr7_3:44399591-44399610 | Msa1105650:intron | 35.0% |
| TTTACCTTGCAGATAATCCA+AGG | + | chr7_3:44399617-44399636 | None:intergenic | 35.0% | |
| GGATTATCTGCAAGGTAAAA+TGG | - | chr7_3:44399618-44399637 | Msa1105650:intron | 35.0% | |
| TAGAAGAAGGTTTGAATAGC+AGG | - | chr7_3:44399647-44399666 | Msa1105650:intron | 35.0% | |
| AGAAGAAGGTTTGAATAGCA+GGG | - | chr7_3:44399648-44399667 | Msa1105650:intron | 35.0% | |
| ! | TTGAATAGCAGGGATTTTGT+TGG | - | chr7_3:44399658-44399677 | Msa1105650:intron | 35.0% |
| ! | TGAATAGCAGGGATTTTGTT+GGG | - | chr7_3:44399659-44399678 | Msa1105650:intron | 35.0% |
| AATTAACCGATCTATTCCTG+CGG | + | chr7_3:44399701-44399720 | None:intergenic | 35.0% | |
| ! | AATGGTGGTGTTGAAAGATT+TGG | - | chr7_3:44399757-44399776 | Msa1105650:intron | 35.0% |
| !! | TGAAAGATTTGGTAATGACC+TGG | - | chr7_3:44399768-44399787 | Msa1105650:intron | 35.0% |
| !!! | TGACCTGGATGTTTTATTTG+GGG | - | chr7_3:44399783-44399802 | Msa1105650:intron | 35.0% |
| ATACCCCAAATAAAACATCC+AGG | + | chr7_3:44399789-44399808 | None:intergenic | 35.0% | |
| CAAAATTGAATTAGTGCAGC+TGG | + | chr7_3:44400088-44400107 | None:intergenic | 35.0% | |
| !! | TAGTTTTACACAATCCTCAC+GGG | + | chr7_3:44400242-44400261 | None:intergenic | 35.0% |
| TACCAGATATGTACCAGATA+TGG | + | chr7_3:44400376-44400395 | None:intergenic | 35.0% | |
| GCTAAACATTCCAAATGTCT+CGG | - | chr7_3:44400411-44400430 | Msa1105650:five_prime_UTR | 35.0% | |
| TCGGTGAATTTCGATCTTGA+TGG | + | chr7_3:44396110-44396129 | None:intergenic | 40.0% | |
| GAAATTCATAGCCTCTTCGA+TGG | - | chr7_3:44396342-44396361 | Msa1105650:three_prime_UTR | 40.0% | |
| TGAATTTGACACCATCGAAG+AGG | + | chr7_3:44396356-44396375 | None:intergenic | 40.0% | |
| ATTCAAACCTTGCACAATGC+CGG | + | chr7_3:44396409-44396428 | None:intergenic | 40.0% | |
| TTTGTGATTGAAGATGGAGG+AGG | - | chr7_3:44396505-44396524 | Msa1105650:CDS | 40.0% | |
| !!! | AGATGGGAAAGGTTTTAGAG+AGG | - | chr7_3:44396537-44396556 | Msa1105650:CDS | 40.0% |
| TTCGTACCATACAACATTGC+CGG | + | chr7_3:44396796-44396815 | None:intergenic | 40.0% | |
| TGTTGTATGGTACGAAGTGT+TGG | - | chr7_3:44396800-44396819 | Msa1105650:CDS | 40.0% | |
| ! | GTTGTATGGTACGAAGTGTT+GGG | - | chr7_3:44396801-44396820 | Msa1105650:CDS | 40.0% |
| GATGAGTGGTAAGACTAGAT+GGG | - | chr7_3:44396882-44396901 | Msa1105650:CDS | 40.0% | |
| ACAACTCTCTCTCTCTCTAA+TGG | + | chr7_3:44396926-44396945 | None:intergenic | 40.0% | |
| ATTAGAGAGAGAGAGAGTTG+TGG | - | chr7_3:44396925-44396944 | Msa1105650:CDS | 40.0% | |
| AGCGCCTATAGTAGAAAAGA+TGG | - | chr7_3:44396949-44396968 | Msa1105650:CDS | 40.0% | |
| ACGAAGAGTAGATTAGATGG+AGG | - | chr7_3:44397029-44397048 | Msa1105650:CDS | 40.0% | |
| AGTCAGATTAGAAGAGGTAG+AGG | - | chr7_3:44397054-44397073 | Msa1105650:CDS | 40.0% | |
| AGAATCAGAGGTTAACGAGT+TGG | - | chr7_3:44397113-44397132 | Msa1105650:CDS | 40.0% | |
| CTTATCCAACTAAGTGAGGT+CGG | + | chr7_3:44397190-44397209 | None:intergenic | 40.0% | |
| ACATATGCCAACCCATATGT+TGG | - | chr7_3:44397318-44397337 | Msa1105650:CDS | 40.0% | |
| AGATGCTGTATCGTATACCA+TGG | - | chr7_3:44397952-44397971 | Msa1105650:CDS | 40.0% | |
| GATGCTGTATCGTATACCAT+GGG | - | chr7_3:44397953-44397972 | Msa1105650:CDS | 40.0% | |
| CACTTCTATCTTCGTTTGGA+TGG | - | chr7_3:44398267-44398286 | Msa1105650:CDS | 40.0% | |
| TGTTAAAGCAGAAAGAGGTG+GGG | + | chr7_3:44398294-44398313 | None:intergenic | 40.0% | |
| GATGTTAAAGCAGAAAGAGG+TGG | + | chr7_3:44398296-44398315 | None:intergenic | 40.0% | |
| GAGGATGTTAAAGCAGAAAG+AGG | + | chr7_3:44398299-44398318 | None:intergenic | 40.0% | |
| TGAGTACCTGAGCTTATGAT+CGG | + | chr7_3:44398366-44398385 | None:intergenic | 40.0% | |
| ! | TTTTCCTTTGCAACTCCTGT+AGG | + | chr7_3:44398412-44398431 | None:intergenic | 40.0% |
| TACAGGAGTTGCAAAGGAAA+AGG | - | chr7_3:44398411-44398430 | Msa1105650:intron | 40.0% | |
| ! | TTTTCGGAAGCCAATGATAG+GGG | + | chr7_3:44398515-44398534 | None:intergenic | 40.0% |
| ! | CTTTTCGGAAGCCAATGATA+GGG | + | chr7_3:44398516-44398535 | None:intergenic | 40.0% |
| !! | AAGGGATTATGTTGACTCTG+TGG | - | chr7_3:44398595-44398614 | Msa1105650:intron | 40.0% |
| GGATGAAATGTTACAGCCAT+TGG | - | chr7_3:44398616-44398635 | Msa1105650:intron | 40.0% | |
| ACCTTAGCTTCATCAACCAA+TGG | + | chr7_3:44398635-44398654 | None:intergenic | 40.0% | |
| ! | GTTGATGAAGCTAAGGTAGT+TGG | - | chr7_3:44398638-44398657 | Msa1105650:intron | 40.0% |
| GATATAGTTGCCGAGAAGAA+TGG | - | chr7_3:44398660-44398679 | Msa1105650:intron | 40.0% | |
| TTGCTGAGATCCATTCTTCT+CGG | + | chr7_3:44398673-44398692 | None:intergenic | 40.0% | |
| AGAAGAATGGATCTCAGCAA+TGG | - | chr7_3:44398673-44398692 | Msa1105650:intron | 40.0% | |
| AACCTCCTTATCCACATACT+TGG | - | chr7_3:44398697-44398716 | Msa1105650:intron | 40.0% | |
| CTTTGCCAAGTATGTGGATA+AGG | + | chr7_3:44398705-44398724 | None:intergenic | 40.0% | |
| CTTATCCACATACTTGGCAA+AGG | - | chr7_3:44398703-44398722 | Msa1105650:intron | 40.0% | |
| !! | TCCAGATTGGCTTGATTTGT+GGG | - | chr7_3:44398934-44398953 | Msa1105650:intron | 40.0% |
| ! | AAAGTAATGAGCGGCATTGA+TGG | + | chr7_3:44399290-44399309 | None:intergenic | 40.0% |
| ! | TGTCTTTTTCCTTGAGATGG+GGG | - | chr7_3:44399339-44399358 | Msa1105650:intron | 40.0% |
| ! | TGGAAGAGTTTAGAACAGAG+TGG | - | chr7_3:44399467-44399486 | Msa1105650:intron | 40.0% |
| ! | GGAAGAGTTTAGAACAGAGT+GGG | - | chr7_3:44399468-44399487 | Msa1105650:intron | 40.0% |
| CAATGGCAAAAGAGTGAAGA+AGG | - | chr7_3:44399562-44399581 | Msa1105650:intron | 40.0% | |
| TAAGACTCTAATAGAGGCCT+TGG | - | chr7_3:44399597-44399616 | Msa1105650:intron | 40.0% | |
| AAAATGGCAGTGGTAGAAGA+AGG | - | chr7_3:44399634-44399653 | Msa1105650:intron | 40.0% | |
| ! | GAATAGCAGGGATTTTGTTG+GGG | - | chr7_3:44399660-44399679 | Msa1105650:intron | 40.0% |
| AGAGTGCAAGAATGTATGAC+AGG | - | chr7_3:44399889-44399908 | Msa1105650:CDS | 40.0% | |
| GAGTGCAAGAATGTATGACA+GGG | - | chr7_3:44399890-44399909 | Msa1105650:CDS | 40.0% | |
| AGTGCAAGAATGTATGACAG+GGG | - | chr7_3:44399891-44399910 | Msa1105650:CDS | 40.0% | |
| AAGAGATGGTTGAAGGAGAA+TGG | - | chr7_3:44399916-44399935 | Msa1105650:intron | 40.0% | |
| AGAGATGGTTGAAGGAGAAT+GGG | - | chr7_3:44399917-44399936 | Msa1105650:intron | 40.0% | |
| AAGGACGTGTGAAAATGTAG+AGG | - | chr7_3:44400048-44400067 | Msa1105650:CDS | 40.0% | |
| AGGACGTGTGAAAATGTAGA+GGG | - | chr7_3:44400049-44400068 | Msa1105650:CDS | 40.0% | |
| GACCATATCTGGTACATATC+TGG | - | chr7_3:44400371-44400390 | Msa1105650:intron | 40.0% | |
| ATGTAAGCTACCGAGACATT+TGG | + | chr7_3:44400424-44400443 | None:intergenic | 40.0% | |
| !! | TGTTTGGGTTGATCCAAAGC+AGG | + | chr7_3:44396005-44396024 | None:intergenic | 45.0% |
| AACGAAAACCACTTCATCGC+CGG | - | chr7_3:44396024-44396043 | Msa1105650:three_prime_UTR | 45.0% | |
| ! | TCGATCTTGATGGTTGCAGA+AGG | + | chr7_3:44396100-44396119 | None:intergenic | 45.0% |
| !! | AGAGCACTGAGTTTGAAGCT+CGG | + | chr7_3:44396247-44396266 | None:intergenic | 45.0% |
| ! | TCAAACTCAGTGCTCTGAGT+TGG | - | chr7_3:44396251-44396270 | Msa1105650:three_prime_UTR | 45.0% |
| GAAGAGGCTATGAATTTCGC+CGG | + | chr7_3:44396340-44396359 | None:intergenic | 45.0% | |
| CTATCTGATACTTGCTCCTC+CGG | - | chr7_3:44396387-44396406 | Msa1105650:three_prime_UTR | 45.0% | |
| TAGAGAGGAACTTGCGACTT+TGG | - | chr7_3:44396552-44396571 | Msa1105650:CDS | 45.0% | |
| GAGACTGTTCGTGTTTATGC+AGG | - | chr7_3:44396595-44396614 | Msa1105650:CDS | 45.0% | |
| CGATAGGACAACAGTTAGAC+CGG | - | chr7_3:44396774-44396793 | Msa1105650:CDS | 45.0% | |
| GTTAGACCGGCAATGTTGTA+TGG | - | chr7_3:44396787-44396806 | Msa1105650:CDS | 45.0% | |
| GGATGAGTGGTAAGACTAGA+TGG | - | chr7_3:44396881-44396900 | Msa1105650:CDS | 45.0% | |
| GTGGTAAGACTAGATGGGAT+AGG | - | chr7_3:44396887-44396906 | Msa1105650:CDS | 45.0% | |
| GAGGAGAGTCAGATTAGAAG+AGG | - | chr7_3:44397048-44397067 | Msa1105650:CDS | 45.0% | |
| TATGAAGCATAGAGGACACC+AGG | - | chr7_3:44397233-44397252 | Msa1105650:CDS | 45.0% | |
| TGGACACAGCACCAACATAT+GGG | + | chr7_3:44397332-44397351 | None:intergenic | 45.0% | |
| ATGGACACAGCACCAACATA+TGG | + | chr7_3:44397333-44397352 | None:intergenic | 45.0% | |
| ! | TGTCTCTGGAAGACACACAA+AGG | + | chr7_3:44397897-44397916 | None:intergenic | 45.0% |
| TCAAGTTTCAGTGCTGTCTC+TGG | + | chr7_3:44397911-44397930 | None:intergenic | 45.0% | |
| CTAGAGCTCGATCTACTCTA+TGG | + | chr7_3:44398211-44398230 | None:intergenic | 45.0% | |
| !!! | TCTAGCCATTTTAAGACCCC+AGG | - | chr7_3:44398226-44398245 | Msa1105650:CDS | 45.0% |
| AATCGCCTGGGGTCTTAAAA+TGG | + | chr7_3:44398234-44398253 | None:intergenic | 45.0% | |
| GTTAAAGCAGAAAGAGGTGG+GGG | + | chr7_3:44398293-44398312 | None:intergenic | 45.0% | |
| AATCCTTGCATCTGAGTGTG+AGG | + | chr7_3:44398318-44398337 | None:intergenic | 45.0% | |
| TCTTGCTTTGTGCAACCTAC+AGG | - | chr7_3:44398394-44398413 | Msa1105650:intron | 45.0% | |
| ACAACTTGTGGGCCATGATA+GGG | - | chr7_3:44398442-44398461 | Msa1105650:CDS | 45.0% | |
| AGCTCTTCAATTGCCCAAAG+TGG | + | chr7_3:44398485-44398504 | None:intergenic | 45.0% | |
| GCTTGTGAATCCCCTATCAT+TGG | - | chr7_3:44398502-44398521 | Msa1105650:CDS | 45.0% | |
| ! | GCTTTTCGGAAGCCAATGAT+AGG | + | chr7_3:44398517-44398536 | None:intergenic | 45.0% |
| !! | GCCATTGGTTGATGAAGCTA+AGG | - | chr7_3:44398631-44398650 | Msa1105650:intron | 45.0% |
| TGCCAAGTATGTGGATAAGG+AGG | + | chr7_3:44398702-44398721 | None:intergenic | 45.0% | |
| !! | GTCCAGATTGGCTTGATTTG+TGG | - | chr7_3:44398933-44398952 | Msa1105650:intron | 45.0% |
| TTGTGGGCAGAAATAGAGCT+AGG | - | chr7_3:44398950-44398969 | Msa1105650:intron | 45.0% | |
| !! | ACAAAGGCACTGGAAACTAG+AGG | + | chr7_3:44399079-44399098 | None:intergenic | 45.0% |
| GTTCAACAACAGACGCTAGA+TGG | + | chr7_3:44399105-44399124 | None:intergenic | 45.0% | |
| CGTCTGTTGTTGAACGTTGT+CGG | - | chr7_3:44399110-44399129 | Msa1105650:intron | 45.0% | |
| !! | TTCTTGGCAACGGACTAGTA+TGG | + | chr7_3:44399212-44399231 | None:intergenic | 45.0% |
| GGCAAAAGAGTGAAGAAGGT+TGG | - | chr7_3:44399566-44399585 | Msa1105650:intron | 45.0% | |
| TCTGCAAGGTAAAATGGCAG+TGG | - | chr7_3:44399624-44399643 | Msa1105650:intron | 45.0% | |
| TGTTGGGGTTTGGAGAAGTT+TGG | - | chr7_3:44399675-44399694 | Msa1105650:intron | 45.0% | |
| ! | TATTTGGGGTATTTGGGGCA+TGG | - | chr7_3:44399797-44399816 | Msa1105650:intron | 45.0% |
| GTGCAAGAATGTATGACAGG+GGG | - | chr7_3:44399892-44399911 | Msa1105650:CDS | 45.0% | |
| TGCAAGAATGTATGACAGGG+GGG | - | chr7_3:44399893-44399912 | Msa1105650:CDS | 45.0% | |
| TGCAGAGTAGAGATTGCACA+AGG | - | chr7_3:44400029-44400048 | Msa1105650:CDS | 45.0% | |
| TGATAGTCCAGCTTAAGCGT+TGG | - | chr7_3:44400332-44400351 | Msa1105650:five_prime_UTR | 45.0% | |
| GCTGACAGAATGACCATATC+TGG | - | chr7_3:44400360-44400379 | Msa1105650:intron | 45.0% | |
| GTAGGAGGAAGATGAGTCTC+CGG | + | chr7_3:44396046-44396065 | None:intergenic | 50.0% | |
| GACTCATCTTCCTCCTACAC+TGG | - | chr7_3:44396048-44396067 | Msa1105650:three_prime_UTR | 50.0% | |
| ! | AGATGAGAAGATGGTGGCAG+TGG | + | chr7_3:44396147-44396166 | None:intergenic | 50.0% |
| TGGGAGAGATGAGAAGATGG+TGG | + | chr7_3:44396153-44396172 | None:intergenic | 50.0% | |
| GAGTGGGAGAGATGAGAAGA+TGG | + | chr7_3:44396156-44396175 | None:intergenic | 50.0% | |
| TGAAGCTCGGCGACGAAATT+GGG | + | chr7_3:44396234-44396253 | None:intergenic | 50.0% | |
| TTGAAGCTCGGCGACGAAAT+TGG | + | chr7_3:44396235-44396254 | None:intergenic | 50.0% | |
| ! | GCGCTCTTGATGACTTGACT+CGG | - | chr7_3:44396277-44396296 | Msa1105650:three_prime_UTR | 50.0% |
| !! | GATGACTTGACTCGGAGACT+CGG | - | chr7_3:44396285-44396304 | Msa1105650:three_prime_UTR | 50.0% |
| ! | GCCAAGTACGCTTCGTTTTC+CGG | - | chr7_3:44396318-44396337 | Msa1105650:three_prime_UTR | 50.0% |
| CGGAGGAGCAAGTATCAGAT+AGG | + | chr7_3:44396389-44396408 | None:intergenic | 50.0% | |
| GTGATTGAAGATGGAGGAGG+AGG | - | chr7_3:44396508-44396527 | Msa1105650:CDS | 50.0% | |
| CTTTGGCGAAGGAAGTTGCT+AGG | - | chr7_3:44396569-44396588 | Msa1105650:CDS | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr7_3:44396848-44396867 | Msa1105650:CDS | 50.0% |
| AGGATGATGCGTTGGATGAG+TGG | - | chr7_3:44396868-44396887 | Msa1105650:CDS | 50.0% | |
| GGTTTGGGCATGTAGAGAGA+AGG | - | chr7_3:44396990-44397009 | Msa1105650:CDS | 50.0% | |
| ACTAAGTGAGGTCGGCTACA+TGG | + | chr7_3:44397182-44397201 | None:intergenic | 50.0% | |
| TGTAGCCGACCTCACTTAGT+TGG | - | chr7_3:44397182-44397201 | Msa1105650:CDS | 50.0% | |
| CACAGCACCAACATATGGGT+TGG | + | chr7_3:44397328-44397347 | None:intergenic | 50.0% | |
| !! | ACGAAGATAGAAGTGCCCGA+TGG | + | chr7_3:44398262-44398281 | None:intergenic | 50.0% |
| CGGGCACTTCTATCTTCGTT+TGG | - | chr7_3:44398263-44398282 | Msa1105650:CDS | 50.0% | |
| CATCCTCACACTCAGATGCA+AGG | - | chr7_3:44398312-44398331 | Msa1105650:CDS | 50.0% | |
| GCAACCTACAGGAGTTGCAA+AGG | - | chr7_3:44398405-44398424 | Msa1105650:intron | 50.0% | |
| GACAACTTGTGGGCCATGAT+AGG | - | chr7_3:44398441-44398460 | Msa1105650:CDS | 50.0% | |
| GTAGGGCAATCTCCCTATCA+TGG | + | chr7_3:44398457-44398476 | None:intergenic | 50.0% | |
| TTGCCCTACGACAACCACTT+TGG | - | chr7_3:44398468-44398487 | Msa1105650:CDS | 50.0% | |
| TGCCCTACGACAACCACTTT+GGG | - | chr7_3:44398469-44398488 | Msa1105650:CDS | 50.0% | |
| TGCCCAAAGTGGTTGTCGTA+GGG | + | chr7_3:44398474-44398493 | None:intergenic | 50.0% | |
| TTGCCCAAAGTGGTTGTCGT+AGG | + | chr7_3:44398475-44398494 | None:intergenic | 50.0% | |
| !! | CTAGAAGAGGAGAGTGCTAC+AGG | - | chr7_3:44398752-44398771 | Msa1105650:intron | 50.0% |
| GCCCACAAATCAAGCCAATC+TGG | + | chr7_3:44398938-44398957 | None:intergenic | 50.0% | |
| ! | TAGATGGCGAACAAAGGCAC+TGG | + | chr7_3:44399089-44399108 | None:intergenic | 50.0% |
| AGACGCTAGATGGCGAACAA+AGG | + | chr7_3:44399095-44399114 | None:intergenic | 50.0% | |
| TCCGTTGCCAAGAAGCTGAA+GGG | - | chr7_3:44399218-44399237 | Msa1105650:intron | 50.0% | |
| ACCCTTCAGCTTCTTGGCAA+CGG | + | chr7_3:44399222-44399241 | None:intergenic | 50.0% | |
| CAGTCAACCCTTCAGCTTCT+TGG | + | chr7_3:44399228-44399247 | None:intergenic | 50.0% | |
| ! | CTTTTTCCTTGAGATGGGGG+TGG | - | chr7_3:44399342-44399361 | Msa1105650:intron | 50.0% |
| GAGGCCTTGGATTATCTGCA+AGG | - | chr7_3:44399610-44399629 | Msa1105650:intron | 50.0% | |
| ! | GCAGGGATTTTGTTGGGGTT+TGG | - | chr7_3:44399665-44399684 | Msa1105650:intron | 50.0% |
| GTTTGGCCGCAGGAATAGAT+CGG | - | chr7_3:44399692-44399711 | Msa1105650:intron | 50.0% | |
| ! | GCATGGTGTTTGAGACCAGA+AGG | - | chr7_3:44399814-44399833 | Msa1105650:intron | 50.0% |
| AAATTTGCCATGAGCCCGTG+AGG | - | chr7_3:44400225-44400244 | Msa1105650:CDS | 50.0% | |
| GCATGTTCCAACGCTTAAGC+TGG | + | chr7_3:44400342-44400361 | None:intergenic | 50.0% | |
| ATGAGTCTCCGGCGATGAAG+TGG | + | chr7_3:44396035-44396054 | None:intergenic | 55.0% | |
| ! | AGGTTTTTCGCCGACGTGTG+CGG | + | chr7_3:44396080-44396099 | None:intergenic | 55.0% |
| AGTGGTTGGAGGCGGTTCAT+CGG | + | chr7_3:44396129-44396148 | None:intergenic | 55.0% | |
| ! | AAGATGGTGGCAGTGGTTGG+AGG | + | chr7_3:44396140-44396159 | None:intergenic | 55.0% |
| ! | GAGAAGATGGTGGCAGTGGT+TGG | + | chr7_3:44396143-44396162 | None:intergenic | 55.0% |
| GTGGAAGTTGTGGTCGAGGA+AGG | + | chr7_3:44396187-44396206 | None:intergenic | 55.0% | |
| !! | ATTGGGAGACTCGGTGAGGA+CGG | + | chr7_3:44396217-44396236 | None:intergenic | 55.0% |
| !! | CGAAATTGGGAGACTCGGTG+AGG | + | chr7_3:44396221-44396240 | None:intergenic | 55.0% |
| GGCGACGAAATTGGGAGACT+CGG | + | chr7_3:44396226-44396245 | None:intergenic | 55.0% | |
| GCCGGAAAACGAAGCGTACT+TGG | + | chr7_3:44396322-44396341 | None:intergenic | 55.0% | |
| CAAACCTTGCACAATGCCGG+AGG | + | chr7_3:44396406-44396425 | None:intergenic | 55.0% | |
| GAGGAGGAGGAGAACGAGAT+GGG | - | chr7_3:44396521-44396540 | Msa1105650:CDS | 55.0% | |
| GGAGGAGAACGAGATGGGAA+AGG | - | chr7_3:44396526-44396545 | Msa1105650:CDS | 55.0% | |
| GGAACTTGCGACTTTGGCGA+AGG | - | chr7_3:44396558-44396577 | Msa1105650:CDS | 55.0% | |
| GGCGAAGGAAGTTGCTAGGT+TGG | - | chr7_3:44396573-44396592 | Msa1105650:CDS | 55.0% | |
| CGGAGATGAGGATGATGCGT+TGG | - | chr7_3:44396860-44396879 | Msa1105650:CDS | 55.0% | |
| CGTTGTGTCAATGTCGTGCC+TGG | + | chr7_3:44397254-44397273 | None:intergenic | 55.0% | |
| CGACATTGACACAACGTCGC+AGG | - | chr7_3:44397258-44397277 | Msa1105650:CDS | 55.0% | |
| TCGGCGTGCATGCTTTGTAG+AGG | + | chr7_3:44398347-44398366 | None:intergenic | 55.0% | |
| TGCACGCCGATCATAAGCTC+AGG | - | chr7_3:44398357-44398376 | Msa1105650:intron | 55.0% | |
| GTCCGTTGCCAAGAAGCTGA+AGG | - | chr7_3:44399217-44399236 | Msa1105650:intron | 55.0% | |
| GGTGGACGAGGAAGACAAAG+TGG | - | chr7_3:44399360-44399379 | Msa1105650:intron | 55.0% | |
| GTTTGGAGAAGTTTGGCCGC+AGG | - | chr7_3:44399682-44399701 | Msa1105650:intron | 55.0% | |
| GTATGACAGGGGGGAAGAGA+TGG | - | chr7_3:44399902-44399921 | Msa1105650:CDS | 55.0% | |
| AGGGGGGAAGAGATGGTTGA+AGG | - | chr7_3:44399909-44399928 | Msa1105650:intron | 55.0% | |
| ACACAATCCTCACGGGCTCA+TGG | + | chr7_3:44400235-44400254 | None:intergenic | 55.0% | |
| TGTGCGGTGTTCGCCAGTGT+AGG | + | chr7_3:44396064-44396083 | None:intergenic | 60.0% | |
| ATGGTGGCAGTGGTTGGAGG+CGG | + | chr7_3:44396137-44396156 | None:intergenic | 60.0% | |
| ! | GAGGAAGGAGAGTGCGGAGT+GGG | + | chr7_3:44396172-44396191 | None:intergenic | 60.0% |
| GTGGTCGAGGAAGGAGAGTG+CGG | + | chr7_3:44396178-44396197 | None:intergenic | 60.0% | |
| CGGTGTGGAAGTTGTGGTCG+AGG | + | chr7_3:44396191-44396210 | None:intergenic | 60.0% | |
| CGGTTGCGGTGTGGAAGTTG+TGG | + | chr7_3:44396197-44396216 | None:intergenic | 60.0% | |
| !! | AGACTCGGTGAGGACGGTTG+CGG | + | chr7_3:44396211-44396230 | None:intergenic | 60.0% |
| !! | CTTGACTCGGAGACTCGGTG+CGG | - | chr7_3:44396290-44396309 | Msa1105650:three_prime_UTR | 60.0% |
| !! | TTGACTCGGAGACTCGGTGC+GGG | - | chr7_3:44396291-44396310 | Msa1105650:three_prime_UTR | 60.0% |
| TGCTCCTCCGGCATTGTGCA+AGG | - | chr7_3:44396399-44396418 | Msa1105650:three_prime_UTR | 60.0% | |
| GGAGGAGGAGGAGAACGAGA+TGG | - | chr7_3:44396520-44396539 | Msa1105650:CDS | 60.0% | |
| CGATGGTCAGCAATCGCCTG+GGG | + | chr7_3:44398245-44398264 | None:intergenic | 60.0% | |
| CCGATGGTCAGCAATCGCCT+GGG | + | chr7_3:44398246-44398265 | None:intergenic | 60.0% | |
| CCCAGGCGATTGCTGACCAT+CGG | - | chr7_3:44398243-44398262 | Msa1105650:CDS | 60.0% | |
| CCAGGCGATTGCTGACCATC+GGG | - | chr7_3:44398244-44398263 | Msa1105650:CDS | 60.0% | |
| GCGGTGTTCGCCAGTGTAGG+AGG | + | chr7_3:44396061-44396080 | None:intergenic | 65.0% | |
| CTGGCGAACACCGCACACGT+CGG | - | chr7_3:44396067-44396086 | Msa1105650:three_prime_UTR | 65.0% | |
| ! | CGAGGAAGGAGAGTGCGGAG+TGG | + | chr7_3:44396173-44396192 | None:intergenic | 65.0% |
| CCCGATGGTCAGCAATCGCC+TGG | + | chr7_3:44398247-44398266 | None:intergenic | 65.0% | |
| CCTCGTCCACCCCCATCTCA+AGG | + | chr7_3:44399351-44399370 | None:intergenic | 65.0% | |
| CCTTGAGATGGGGGTGGACG+AGG | - | chr7_3:44399348-44399367 | Msa1105650:intron | 65.0% | |
| CGGTGAGGACGGTTGCGGTG+TGG | + | chr7_3:44396206-44396225 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 44395993 | 44400451 | 44395993 | ID=Msa1105650;Name=Msa1105650 |
| chr7_3 | mRNA | 44395993 | 44400451 | 44395993 | ID=Msa1105650-mRNA-1;Parent=Msa1105650;Name=Msa1105650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=112|1|1|1|0.75|0.6|5|449|798 |
| chr7_3 | exon | 44395993 | 44398340 | 44395993 | ID=Msa1105650-mRNA-1:exon:9169;Parent=Msa1105650-mRNA-1 |
| chr7_3 | exon | 44398426 | 44398532 | 44398426 | ID=Msa1105650-mRNA-1:exon:9168;Parent=Msa1105650-mRNA-1 |
| chr7_3 | exon | 44399828 | 44399926 | 44399828 | ID=Msa1105650-mRNA-1:exon:9167;Parent=Msa1105650-mRNA-1 |
| chr7_3 | exon | 44400024 | 44400374 | 44400024 | ID=Msa1105650-mRNA-1:exon:9166;Parent=Msa1105650-mRNA-1 |
| chr7_3 | exon | 44400399 | 44400451 | 44400399 | ID=Msa1105650-mRNA-1:exon:9165;Parent=Msa1105650-mRNA-1 |
| chr7_3 | five_prime_UTR | 44400399 | 44400451 | 44400399 | ID=Msa1105650-mRNA-1:five_prime_utr;Parent=Msa1105650-mRNA-1 |
| chr7_3 | five_prime_UTR | 44400316 | 44400374 | 44400316 | ID=Msa1105650-mRNA-1:five_prime_utr;Parent=Msa1105650-mRNA-1 |
| chr7_3 | CDS | 44400024 | 44400315 | 44400024 | ID=Msa1105650-mRNA-1:cds;Parent=Msa1105650-mRNA-1 |
| chr7_3 | CDS | 44399828 | 44399926 | 44399828 | ID=Msa1105650-mRNA-1:cds;Parent=Msa1105650-mRNA-1 |
| chr7_3 | CDS | 44398426 | 44398532 | 44398426 | ID=Msa1105650-mRNA-1:cds;Parent=Msa1105650-mRNA-1 |
| chr7_3 | CDS | 44396442 | 44398340 | 44396442 | ID=Msa1105650-mRNA-1:cds;Parent=Msa1105650-mRNA-1 |
| chr7_3 | three_prime_UTR | 44395993 | 44396441 | 44395993 | ID=Msa1105650-mRNA-1:three_prime_utr;Parent=Msa1105650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
