Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044890 | A0A396J752 | 55.556 | 72 | 27 | 1 | 101 | 172 | 1 | 67 | 5.79e-11 | 76.3 |
| Msa1044890 | A0A396J752 | 62.500 | 320 | 113 | 6 | 173 | 492 | 151 | 463 | 4.70e-127 | 388 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0139180 | Msa1044890 | 0.810717 | 1.003298e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044890 | MtrunA17_Chr2g0305311 | 62.500 | 320 | 113 | 6 | 173 | 492 | 151 | 463 | 9.04e-131 | 388 |
| Msa1044890 | MtrunA17_Chr2g0305311 | 55.556 | 72 | 27 | 1 | 101 | 172 | 1 | 67 | 1.11e-14 | 76.3 |
| Msa1044890 | MtrunA17_Chr6g0467141 | 89.344 | 122 | 13 | 0 | 368 | 489 | 1 | 122 | 1.43e-69 | 219 |
| Msa1044890 | MtrunA17_Chr2g0309021 | 28.981 | 314 | 188 | 8 | 191 | 476 | 190 | 496 | 1.41e-35 | 139 |
| Msa1044890 | MtrunA17_Chr4g0011741 | 24.834 | 302 | 205 | 11 | 201 | 487 | 586 | 880 | 6.97e-14 | 74.7 |
| Msa1044890 | MtrunA17_Chr3g0086061 | 76.190 | 42 | 8 | 1 | 448 | 489 | 1 | 40 | 3.12e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044890 | AT1G40087.1 | 25.429 | 350 | 242 | 7 | 135 | 472 | 3 | 345 | 5.48e-30 | 121 |
| Msa1044890 | AT3G30200.1 | 26.909 | 275 | 188 | 4 | 206 | 472 | 196 | 465 | 8.73e-24 | 104 |
Find 102 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATTATTAGCAAATTATT+TGG | 0.134917 | 7_2:-3940981 | Msa1044890:CDS |
| CCTCTTTGTCTCTAGAATTT+TGG | 0.205491 | 7_2:+3939657 | None:intergenic |
| GTCAAGCATTTGCATTAATA+AGG | 0.213637 | 7_2:+3939679 | None:intergenic |
| GCAAGTTCTTGAGAGATAAT+TGG | 0.249235 | 7_2:+3942246 | None:intergenic |
| TGCTGGATATGTCCGTTCTA+TGG | 0.260226 | 7_2:-3939855 | Msa1044890:CDS |
| ATTTAAAGATTTCCCGATAA+TGG | 0.263080 | 7_2:-3940942 | Msa1044890:CDS |
| AGTTAATTCATAGAATTCTT+TGG | 0.292316 | 7_2:+3945845 | None:intergenic |
| TCCACTCAGGCAGTTGATTT+AGG | 0.306922 | 7_2:+3939560 | None:intergenic |
| CATTCATAAAACTTCGCTTT+AGG | 0.312809 | 7_2:+3939537 | None:intergenic |
| AGCAAATTATTTGGGCCAAT+TGG | 0.338084 | 7_2:-3940972 | Msa1044890:CDS |
| GAAGCATTTGCCAATGTGTT+TGG | 0.345306 | 7_2:-3939887 | Msa1044890:CDS |
| GTCATTATCCTAGTTCCATT+TGG | 0.351424 | 7_2:+3941043 | None:intergenic |
| CTTTAAATTGCCTTGCCAAT+TGG | 0.357012 | 7_2:+3940957 | None:intergenic |
| AAATTATTAGCAAATTATTT+GGG | 0.372951 | 7_2:-3940980 | Msa1044890:CDS |
| TCCCATCTTTCAACCATTAT+CGG | 0.380780 | 7_2:+3940929 | None:intergenic |
| TCGAACTTTGCTTGCTCGTA+TGG | 0.386412 | 7_2:+3942312 | None:intergenic |
| GTAATGTTTGTGCAATAGTT+TGG | 0.394963 | 7_2:+3939625 | None:intergenic |
| TGTTTAAGAAACATTACAAA+TGG | 0.399446 | 7_2:-3940673 | Msa1044890:CDS |
| GCTGGATATGTCCGTTCTAT+GGG | 0.400623 | 7_2:-3939854 | Msa1044890:CDS |
| AGCCGAGATTGATTCTCTTA+AGG | 0.409612 | 7_2:-3939741 | Msa1044890:CDS |
| TACTTGTAGGAATTGAGATA+TGG | 0.409851 | 7_2:-3940263 | Msa1044890:intron |
| CATCCTTCCATTTCTTTCCA+AGG | 0.410334 | 7_2:+3940708 | None:intergenic |
| TCTCTAGCCTTGGAAAGAAA+TGG | 0.416906 | 7_2:-3940715 | Msa1044890:CDS |
| AAGTTTGTTGTTGATGATGA+TGG | 0.421434 | 7_2:-3940758 | Msa1044890:CDS |
| TTCCTTTCTTCGCTTACACT+TGG | 0.431022 | 7_2:+3945873 | None:intergenic |
| ATTGTGCATGCATTTATGTT+CGG | 0.434564 | 7_2:-3939427 | Msa1044890:three_prime_UTR |
| CCCGATAATGGTTGAAAGAT+GGG | 0.441650 | 7_2:-3940930 | Msa1044890:CDS |
| ACGATGCGTTTGGAGTTGAT+AGG | 0.445846 | 7_2:-3945959 | Msa1044890:CDS |
| TCCCGATAATGGTTGAAAGA+TGG | 0.446335 | 7_2:-3940931 | Msa1044890:CDS |
| TTTGCTTCATAGAACGAACT+TGG | 0.455155 | 7_2:+3945663 | None:intergenic |
| GCAGATTGCCCCACCGGTTG+AGG | 0.457756 | 7_2:+3941004 | None:intergenic |
| AATCTCTACATTTGATGCAA+TGG | 0.458071 | 7_2:+3945917 | None:intergenic |
| AAATATGTTATCTCTAGCCT+TGG | 0.458446 | 7_2:-3940725 | Msa1044890:CDS |
| ATCTCTACATTTGATGCAAT+GGG | 0.460721 | 7_2:+3945918 | None:intergenic |
| CCCATCTTTCAACCATTATC+GGG | 0.460909 | 7_2:+3940930 | None:intergenic |
| ATGGAATGATGTTCCTCAAC+CGG | 0.463679 | 7_2:-3941017 | Msa1044890:CDS |
| TATGTCCGTTCTATGGGGCT+TGG | 0.464477 | 7_2:-3939848 | Msa1044890:CDS |
| ATTGGCTGCCTCAAGAGCTC+CGG | 0.469208 | 7_2:+3941538 | None:intergenic |
| TCTTGTACACCCTTCATACA+AGG | 0.470520 | 7_2:+3945806 | None:intergenic |
| GTTTAAGAAACATTACAAAT+GGG | 0.473095 | 7_2:-3940672 | Msa1044890:CDS |
| TTGTGCATGCATTTATGTTC+GGG | 0.473613 | 7_2:-3939426 | Msa1044890:three_prime_UTR |
| TTCAGAAGTTGATGTCTTGA+AGG | 0.473713 | 7_2:-3939711 | Msa1044890:CDS |
| CAAATGGGAACTCACATTAG+AGG | 0.477412 | 7_2:-3940657 | Msa1044890:CDS |
| GCAAGCAAAGTTCGAAAGAA+TGG | 0.481894 | 7_2:-3942304 | Msa1044890:CDS |
| AACATGATCAACGATGCGTT+TGG | 0.485141 | 7_2:-3945969 | Msa1044890:CDS |
| TTCTTTCTTTAGGTTGCGAA+TGG | 0.485954 | 7_2:-3941581 | Msa1044890:intron |
| ATGCCGAGGAATATAAAATC+AGG | 0.488070 | 7_2:+3939514 | None:intergenic |
| ATGTGGCGGGTCATACTTCA+AGG | 0.488660 | 7_2:-3941102 | Msa1044890:CDS |
| GAGTCAGTTCCTAGTGTATG+AGG | 0.494286 | 7_2:+3940428 | None:intergenic |
| TTCTATGAATTAACTAGAGA+TGG | 0.494771 | 7_2:-3945837 | Msa1044890:CDS |
| AAGAATCTCCAAATGGAACT+AGG | 0.497813 | 7_2:-3941051 | Msa1044890:CDS |
| AATTTAGCAGATTGCCCCAC+CGG | 0.499755 | 7_2:+3940998 | None:intergenic |
| CGATGCGTTTGGAGTTGATA+GGG | 0.504132 | 7_2:-3945958 | Msa1044890:CDS |
| TGATCTGGGTGAATAAAACT+TGG | 0.513574 | 7_2:+3940614 | None:intergenic |
| GATTGATTCTCTTAAGGAGA+AGG | 0.517958 | 7_2:-3939735 | Msa1044890:CDS |
| TTGGCTGCCTCAAGAGCTCC+GGG | 0.520703 | 7_2:+3941539 | None:intergenic |
| GCAGTTGATTTAGGTCCACT+TGG | 0.522475 | 7_2:+3939569 | None:intergenic |
| GGAGAACAACCCTTGTATGA+AGG | 0.531000 | 7_2:-3945816 | Msa1044890:CDS |
| GTGCTTGAAGAATCTCCAAA+TGG | 0.542925 | 7_2:-3941058 | Msa1044890:CDS |
| CTGTTATTTGTTAGATGTGG+CGG | 0.545341 | 7_2:-3941116 | Msa1044890:intron |
| TTCCAAGTGTAAGCGAAGAA+AGG | 0.545769 | 7_2:-3945875 | Msa1044890:CDS |
| ATTTGCCAATGTGTTTGGAA+AGG | 0.548585 | 7_2:-3939882 | Msa1044890:CDS |
| ATTATTTGGGCCAATTGGCA+AGG | 0.549492 | 7_2:-3940967 | Msa1044890:CDS |
| TGTACAACCCGGAGCTCTTG+AGG | 0.549980 | 7_2:-3941546 | Msa1044890:CDS |
| GATATGGTCGAGAATATAGC+AGG | 0.553453 | 7_2:-3940247 | Msa1044890:CDS |
| CTCCTTAAGAGAATCAATCT+CGG | 0.554776 | 7_2:+3939739 | None:intergenic |
| CCAAAATTCTAGAGACAAAG+AGG | 0.558355 | 7_2:-3939657 | Msa1044890:CDS |
| TGCGATCAGAAAAGATGAGT+TGG | 0.567830 | 7_2:-3940402 | Msa1044890:intron |
| GAGAACAACCCTTGTATGAA+GGG | 0.572568 | 7_2:-3945815 | Msa1044890:CDS |
| AATTTGTCAATGAATATGCA+AGG | 0.581916 | 7_2:-3940184 | Msa1044890:CDS |
| CAGTTGATTTAGGTCCACTT+GGG | 0.583159 | 7_2:+3939570 | None:intergenic |
| ACCTAAATCAACTGCCTGAG+TGG | 0.584189 | 7_2:-3939561 | Msa1044890:three_prime_UTR |
| TAGGAGGAAGGCTGAACAAG+TGG | 0.584537 | 7_2:-3940570 | Msa1044890:intron |
| GAATGATGTTCCTCAACCGG+TGG | 0.591938 | 7_2:-3941014 | Msa1044890:CDS |
| TGTTATTTGTTAGATGTGGC+GGG | 0.593754 | 7_2:-3941115 | Msa1044890:intron |
| TGTTTCGCTTAAAGATGCCA+AGG | 0.601857 | 7_2:-3940210 | Msa1044890:CDS |
| AATGATGTTCCTCAACCGGT+GGG | 0.604945 | 7_2:-3941013 | Msa1044890:CDS |
| GTGTTTGGAAAGGAACATGC+TGG | 0.608959 | 7_2:-3939872 | Msa1044890:CDS |
| GAACTAGGATAATGACTCGA+TGG | 0.610980 | 7_2:-3941036 | Msa1044890:CDS |
| GTTTCGCTTAAAGATGCCAA+GGG | 0.612487 | 7_2:-3940209 | Msa1044890:CDS |
| CTTGGAAAGAAATGGAAGGA+TGG | 0.617605 | 7_2:-3940707 | Msa1044890:CDS |
| ACTTCGCTTTAGGTCCACTC+AGG | 0.619511 | 7_2:+3939547 | None:intergenic |
| ATATGGTCGAGAATATAGCA+GGG | 0.620430 | 7_2:-3940246 | Msa1044890:CDS |
| TAGCCTTGGAAAGAAATGGA+AGG | 0.623697 | 7_2:-3940711 | Msa1044890:CDS |
| CTTGTACACCCTTCATACAA+GGG | 0.624029 | 7_2:+3945807 | None:intergenic |
| ATTTGTCAATGAATATGCAA+GGG | 0.624585 | 7_2:-3940183 | Msa1044890:CDS |
| AAGAAAACAATTACAAAACT+CGG | 0.624839 | 7_2:-3945642 | Msa1044890:intron |
| TTATGCCAAGCCCCATAGAA+CGG | 0.625942 | 7_2:+3939843 | None:intergenic |
| TATATATAATCGATCCCAAG+TGG | 0.631420 | 7_2:-3939584 | Msa1044890:three_prime_UTR |
| ATGTTCCTTTCCAAACACAT+TGG | 0.633980 | 7_2:+3939877 | None:intergenic |
| GAGCGACTAGAGATTCGAGA+TGG | 0.640237 | 7_2:+3939818 | None:intergenic |
| TGATAGGGATCAGACAAATG+AGG | 0.644394 | 7_2:-3945943 | Msa1044890:CDS |
| AAATCAAAGTTTGTACAACC+CGG | 0.645592 | 7_2:-3941557 | Msa1044890:CDS |
| ATTAGCCTCGATGGAAGACG+AGG | 0.645771 | 7_2:+3939784 | None:intergenic |
| CTGGATATGTCCGTTCTATG+GGG | 0.651362 | 7_2:-3939853 | Msa1044890:CDS |
| TATGGTCGAGAATATAGCAG+GGG | 0.665151 | 7_2:-3940245 | Msa1044890:CDS |
| AAGCTGAACTATGTATGCCG+AGG | 0.679499 | 7_2:+3939500 | None:intergenic |
| GTGGTAAACCTTGTGAACGG+AGG | 0.698715 | 7_2:+3941507 | None:intergenic |
| ATTAGCCTCGTCTTCCATCG+AGG | 0.707505 | 7_2:-3939789 | Msa1044890:CDS |
| ATGATGTTCCTCAACCGGTG+GGG | 0.710243 | 7_2:-3941012 | Msa1044890:CDS |
| CATGTGGTAAACCTTGTGAA+CGG | 0.710378 | 7_2:+3941504 | None:intergenic |
| TTCAAGGAGACGTTTAACAG+TGG | 0.713812 | 7_2:-3941086 | Msa1044890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGAAAATAATATTATTG+TGG | - | chr7_2:3941511-3941530 | Msa1044890:intron | 10.0% |
| !! | TAAATTATTAGCAAATTATT+TGG | - | chr7_2:3944401-3944420 | Msa1044890:intron | 10.0% |
| !! | AAATTATTAGCAAATTATTT+GGG | - | chr7_2:3944402-3944421 | Msa1044890:intron | 10.0% |
| !! | TAATATGAAATAACCAAATA+GGG | - | chr7_2:3941920-3941939 | Msa1044890:intron | 15.0% |
| !! | AGTATATTTAAGAAAGATTA+TGG | - | chr7_2:3943426-3943445 | Msa1044890:intron | 15.0% |
| !! | GATAAAAACTAAATTGAAAA+CGG | + | chr7_2:3943564-3943583 | None:intergenic | 15.0% |
| !!! | TTTCAATTTAGTTTTTATCT+AGG | - | chr7_2:3943565-3943584 | Msa1044890:intron | 15.0% |
| !!! | TAGAGATAACATATTTTTTA+TGG | + | chr7_2:3944653-3944672 | None:intergenic | 15.0% |
| !!! | AATGTCAAACATTTAATTTT+AGG | + | chr7_2:3945292-3945311 | None:intergenic | 15.0% |
| !! | AGTTAATTCATAGAATTCTT+TGG | + | chr7_2:3939540-3939559 | None:intergenic | 20.0% |
| !!! | AATGATTTTAGAGCTATTAA+AGG | - | chr7_2:3939673-3939692 | Msa1044890:CDS | 20.0% |
| !! | AAGAAAACAATTACAAAACT+CGG | - | chr7_2:3939740-3939759 | Msa1044890:CDS | 20.0% |
| !! | AAATTTGTAACACTTCAAAA+TGG | - | chr7_2:3939843-3939862 | Msa1044890:CDS | 20.0% |
| !!! | ATATGATTCTTTTAAGAAAG+AGG | - | chr7_2:3940345-3940364 | Msa1044890:intron | 20.0% |
| !! | GTCTTAAAAATAGCAATAAA+TGG | - | chr7_2:3940494-3940513 | Msa1044890:intron | 20.0% |
| !! | CAAACTACTAAATTATTGAA+GGG | + | chr7_2:3941485-3941504 | None:intergenic | 20.0% |
| !! | ACAAACTACTAAATTATTGA+AGG | + | chr7_2:3941486-3941505 | None:intergenic | 20.0% |
| !! | ATTATTGTGGTTCAATTTAT+AGG | - | chr7_2:3941524-3941543 | Msa1044890:CDS | 20.0% |
| !! | TCAATTTGTACATCATTAAT+AGG | + | chr7_2:3941706-3941725 | None:intergenic | 20.0% |
| !! | CTAATATGAAATAACCAAAT+AGG | - | chr7_2:3941919-3941938 | Msa1044890:intron | 20.0% |
| !! | TTATTAAAAACACAAAACTG+TGG | - | chr7_2:3942283-3942302 | Msa1044890:CDS | 20.0% |
| !!! | TATCTATTTTAATGCTTCTT+GGG | + | chr7_2:3942471-3942490 | None:intergenic | 20.0% |
| !!! | TTATCTATTTTAATGCTTCT+TGG | + | chr7_2:3942472-3942491 | None:intergenic | 20.0% |
| !! | AAGCATTAAAATAGATAAGT+TGG | - | chr7_2:3942474-3942493 | Msa1044890:intron | 20.0% |
| !! | AGCATTAAAATAGATAAGTT+GGG | - | chr7_2:3942475-3942494 | Msa1044890:intron | 20.0% |
| !!! | TTTGTTCTAAATTTTGTGAT+GGG | + | chr7_2:3942705-3942724 | None:intergenic | 20.0% |
| !!! | ATTTGTTCTAAATTTTGTGA+TGG | + | chr7_2:3942706-3942725 | None:intergenic | 20.0% |
| !! | ATAACATAAATTTACCACTA+AGG | - | chr7_2:3943522-3943541 | Msa1044890:intron | 20.0% |
| !!! | AATTTATGTTTTAACAGACA+AGG | - | chr7_2:3943656-3943675 | Msa1044890:intron | 20.0% |
| !! | GAGCTTTCATATATAAATAT+TGG | - | chr7_2:3943776-3943795 | Msa1044890:intron | 20.0% |
| !! | AATATTGGAATTCTTTCTTT+AGG | - | chr7_2:3943791-3943810 | Msa1044890:intron | 20.0% |
| !!! | CTGTTATTGATTGTTTTAAA+TGG | - | chr7_2:3944233-3944252 | Msa1044890:intron | 20.0% |
| !!! | GTTTTATGATAACAAAGTAA+AGG | - | chr7_2:3944506-3944525 | Msa1044890:intron | 20.0% |
| !! | TGTTTAAGAAACATTACAAA+TGG | - | chr7_2:3944709-3944728 | Msa1044890:intron | 20.0% |
| !! | GTTTAAGAAACATTACAAAT+GGG | - | chr7_2:3944710-3944729 | Msa1044890:intron | 20.0% |
| !! | ATTATTGTTTCAATTAATGC+AGG | - | chr7_2:3944887-3944906 | Msa1044890:intron | 20.0% |
| ! | TTCTATGAATTAACTAGAGA+TGG | - | chr7_2:3939545-3939564 | Msa1044890:three_prime_UTR | 25.0% |
| !!! | TGAAGTGTTACAAATTTTAC+AGG | + | chr7_2:3939840-3939859 | None:intergenic | 25.0% |
| ! | TTTGAACTCATTATACCAAA+TGG | + | chr7_2:3940142-3940161 | None:intergenic | 25.0% |
| ! | TGAGTTCAAATTATAGCATT+TGG | - | chr7_2:3940152-3940171 | Msa1044890:intron | 25.0% |
| !!! | CAAAACATAAAGGTCATTTT+TGG | - | chr7_2:3940649-3940668 | Msa1044890:CDS | 25.0% |
| ! | TATTCTTTGAACTTCCATAT+TGG | - | chr7_2:3940812-3940831 | Msa1044890:intron | 25.0% |
| ! | TGAAAATGGAAAAATTTCTC+CGG | - | chr7_2:3940999-3941018 | Msa1044890:CDS | 25.0% |
| ! | TCATTCTTTAGACAATTATG+TGG | - | chr7_2:3941255-3941274 | Msa1044890:intron | 25.0% |
| !! | AGTATTGAATGTTGAAGATT+TGG | - | chr7_2:3941281-3941300 | Msa1044890:intron | 25.0% |
| ! | ATACATGAGATTCTTACATA+CGG | - | chr7_2:3941619-3941638 | Msa1044890:intron | 25.0% |
| ! | AACCTTCTTACTTTATCAAA+AGG | + | chr7_2:3942211-3942230 | None:intergenic | 25.0% |
| ! | TCTATTAATCTTCCATAGTA+AGG | + | chr7_2:3942379-3942398 | None:intergenic | 25.0% |
| ! | TTTACAAGATTAACACATAC+CGG | - | chr7_2:3942514-3942533 | Msa1044890:intron | 25.0% |
| ! | TATAACAATCACAAGTACAT+CGG | + | chr7_2:3942856-3942875 | None:intergenic | 25.0% |
| ! | AGAACTTAAAAAAAAGATGG+TGG | - | chr7_2:3943102-3943121 | Msa1044890:intron | 25.0% |
| ! | TTCAAAACGTTCATCAAAAA+AGG | - | chr7_2:3943177-3943196 | Msa1044890:intron | 25.0% |
| ! | AATTTATGTTATGTACACAG+TGG | + | chr7_2:3943514-3943533 | None:intergenic | 25.0% |
| ! | ATAAAAAGAAACCAAGATAC+TGG | - | chr7_2:3944141-3944160 | Msa1044890:intron | 25.0% |
| ! | TAAAAAGAAACCAAGATACT+GGG | - | chr7_2:3944142-3944161 | Msa1044890:intron | 25.0% |
| ! | ATTTAAAGATTTCCCGATAA+TGG | - | chr7_2:3944440-3944459 | Msa1044890:intron | 25.0% |
| !!! | TTGTTTTTGTCAATTTTAGG+AGG | - | chr7_2:3944796-3944815 | Msa1044890:intron | 25.0% |
| ! | TATCATATATGCTTACTTGT+AGG | - | chr7_2:3945106-3945125 | Msa1044890:intron | 25.0% |
| ! | AATTTGTCAATGAATATGCA+AGG | - | chr7_2:3945198-3945217 | Msa1044890:intron | 25.0% |
| ! | ATTTGTCAATGAATATGCAA+GGG | - | chr7_2:3945199-3945218 | Msa1044890:intron | 25.0% |
| !! | TTTTTGCACAATTGAAAAAG+AGG | - | chr7_2:3945246-3945265 | Msa1044890:intron | 25.0% |
| ATCTCTACATTTGATGCAAT+GGG | + | chr7_2:3939467-3939486 | None:intergenic | 30.0% | |
| AATCTCTACATTTGATGCAA+TGG | + | chr7_2:3939468-3939487 | None:intergenic | 30.0% | |
| CAATAAAGCATACAATCGTT+GGG | + | chr7_2:3939794-3939813 | None:intergenic | 30.0% | |
| ! | CAACGATTGTATGCTTTATT+GGG | - | chr7_2:3939793-3939812 | Msa1044890:CDS | 30.0% |
| ! | AACGATTGTATGCTTTATTG+GGG | - | chr7_2:3939794-3939813 | Msa1044890:CDS | 30.0% |
| AACACTTCAAAATGGAAATC+AGG | - | chr7_2:3939851-3939870 | Msa1044890:CDS | 30.0% | |
| ACACTTCAAAATGGAAATCA+GGG | - | chr7_2:3939852-3939871 | Msa1044890:CDS | 30.0% | |
| AGGATTGTGTTGTCAATAAT+AGG | - | chr7_2:3939879-3939898 | Msa1044890:CDS | 30.0% | |
| ! | AAATAACGAAGAACTTTTGC+AGG | + | chr7_2:3939914-3939933 | None:intergenic | 30.0% |
| !! | CTTTTCAATCGAGGTTTTAA+TGG | + | chr7_2:3939938-3939957 | None:intergenic | 30.0% |
| ATAATGTCGATGATAATTCC+TGG | - | chr7_2:3940235-3940254 | Msa1044890:CDS | 30.0% | |
| !!! | TTGCTATTTTTAAGACGACA+AGG | + | chr7_2:3940490-3940509 | None:intergenic | 30.0% |
| ! | TAGCAATAAATGGTGTTTTG+TGG | - | chr7_2:3940504-3940523 | Msa1044890:intron | 30.0% |
| ! | AGCAATAAATGGTGTTTTGT+GGG | - | chr7_2:3940505-3940524 | Msa1044890:intron | 30.0% |
| ACACAGATTTAGATTGAACA+AGG | - | chr7_2:3940552-3940571 | Msa1044890:intron | 30.0% | |
| TCAACAGGTTCAAAACATAA+AGG | - | chr7_2:3940639-3940658 | Msa1044890:CDS | 30.0% | |
| ! | TTTTCTTCTTCCAAATTGGA+GGG | + | chr7_2:3940789-3940808 | None:intergenic | 30.0% |
| ! | ATGCTTTTCTTCTTCCAAAT+TGG | + | chr7_2:3940793-3940812 | None:intergenic | 30.0% |
| ! | ACATTTTTCTCGATATGCAT+CGG | + | chr7_2:3940868-3940887 | None:intergenic | 30.0% |
| ! | CAAGTTTAACTTCTTCAACA+AGG | + | chr7_2:3941401-3941420 | None:intergenic | 30.0% |
| CTTGTTGAAGAAGTTAAACT+TGG | - | chr7_2:3941399-3941418 | Msa1044890:intron | 30.0% | |
| TGTCGAAAGGTAAATTATGT+CGG | - | chr7_2:3941452-3941471 | Msa1044890:intron | 30.0% | |
| GGTTCAATTTATAGGTACTT+AGG | - | chr7_2:3941532-3941551 | Msa1044890:CDS | 30.0% | |
| TAGGAAACATTGAGACTAAA+TGG | - | chr7_2:3941653-3941672 | Msa1044890:intron | 30.0% | |
| ! | TCCAACTCTAGGAAATAATT+CGG | + | chr7_2:3941740-3941759 | None:intergenic | 30.0% |
| ! | TGAGCTTGTAACTTTTCAAT+CGG | + | chr7_2:3941799-3941818 | None:intergenic | 30.0% |
| TAGTGTTCATAAACCCATTT+AGG | - | chr7_2:3942049-3942068 | Msa1044890:intron | 30.0% | |
| ! | GTGACTAACTGTATGTTTTA+TGG | - | chr7_2:3942112-3942131 | Msa1044890:intron | 30.0% |
| CTAATGAGAACATCTTTATC+TGG | + | chr7_2:3942175-3942194 | None:intergenic | 30.0% | |
| ! | GTCCTTTTGATAAAGTAAGA+AGG | - | chr7_2:3942206-3942225 | Msa1044890:CDS | 30.0% |
| TGGATTCAAATTTCGAACAA+AGG | - | chr7_2:3942249-3942268 | Msa1044890:CDS | 30.0% | |
| TAATAGACATCATTGAGCTT+CGG | - | chr7_2:3942392-3942411 | Msa1044890:intron | 30.0% | |
| TGCCAATGTTTAAATGTGAA+TGG | - | chr7_2:3942431-3942450 | Msa1044890:intron | 30.0% | |
| GCCAATGTTTAAATGTGAAT+GGG | - | chr7_2:3942432-3942451 | Msa1044890:intron | 30.0% | |
| AGCTCAAATGGTTTATTATG+TGG | - | chr7_2:3942576-3942595 | Msa1044890:intron | 30.0% | |
| TTATTATGTGGATGATGAGA+AGG | - | chr7_2:3942588-3942607 | Msa1044890:intron | 30.0% | |
| !!! | TCTAAATTTTGTGATGGGTA+TGG | + | chr7_2:3942700-3942719 | None:intergenic | 30.0% |
| TCTTGCTAATTGTATATGTG+TGG | + | chr7_2:3942743-3942762 | None:intergenic | 30.0% | |
| ATAACAATCACAAGTACATC+GGG | + | chr7_2:3942855-3942874 | None:intergenic | 30.0% | |
| AAAGAAAAACTAGCAACAAG+AGG | + | chr7_2:3942978-3942997 | None:intergenic | 30.0% | |
| GGCAGAACTTAAAAAAAAGA+TGG | - | chr7_2:3943099-3943118 | Msa1044890:intron | 30.0% | |
| !!! | TTTTGATGAACGTTTTGAAG+TGG | + | chr7_2:3943176-3943195 | None:intergenic | 30.0% |
| ATACATAATTACGTCCTTAG+TGG | + | chr7_2:3943539-3943558 | None:intergenic | 30.0% | |
| ! | GGATGTTATGTCTTTTTATG+TGG | - | chr7_2:3943677-3943696 | Msa1044890:intron | 30.0% |
| AACAATAGCTGCTTGAATAT+TGG | - | chr7_2:3943739-3943758 | Msa1044890:intron | 30.0% | |
| AAATCAAAGTTTGTACAACC+CGG | - | chr7_2:3943825-3943844 | Msa1044890:intron | 30.0% | |
| TAATCTAGTGTTCCTATTTG+TGG | - | chr7_2:3944185-3944204 | Msa1044890:intron | 30.0% | |
| AATCTAGTGTTCCTATTTGT+GGG | - | chr7_2:3944186-3944205 | Msa1044890:intron | 30.0% | |
| ! | ATGCTGTTATTTGTTAGATG+TGG | - | chr7_2:3944263-3944282 | Msa1044890:intron | 30.0% |
| !! | AAGTTTGTTGTTGATGATGA+TGG | - | chr7_2:3944624-3944643 | Msa1044890:intron | 30.0% |
| AAATATGTTATCTCTAGCCT+TGG | - | chr7_2:3944657-3944676 | Msa1044890:intron | 30.0% | |
| ! | TTTTATTCACCCAGATCATT+GGG | - | chr7_2:3944773-3944792 | Msa1044890:intron | 30.0% |
| !!! | GGGTTGTTTTTGTCAATTTT+AGG | - | chr7_2:3944793-3944812 | Msa1044890:intron | 30.0% |
| !! | TTTTGTCAATTTTAGGAGGA+AGG | - | chr7_2:3944800-3944819 | Msa1044890:intron | 30.0% |
| CACAAAAAAATGCAAGAAGT+AGG | - | chr7_2:3944916-3944935 | Msa1044890:intron | 30.0% | |
| TACTTGTAGGAATTGAGATA+TGG | - | chr7_2:3945119-3945138 | Msa1044890:intron | 30.0% | |
| ! | TTCATTGACAAATTTTCCCT+TGG | + | chr7_2:3945192-3945211 | None:intergenic | 30.0% |
| TTCAATGTTATGACCTCTTT+AGG | + | chr7_2:3945330-3945349 | None:intergenic | 30.0% | |
| GTCAAGCATTTGCATTAATA+AGG | + | chr7_2:3945706-3945725 | None:intergenic | 30.0% | |
| GTAATGTTTGTGCAATAGTT+TGG | + | chr7_2:3945760-3945779 | None:intergenic | 30.0% | |
| TATATATAATCGATCCCAAG+TGG | - | chr7_2:3945798-3945817 | Msa1044890:CDS | 30.0% | |
| CATTCATAAAACTTCGCTTT+AGG | + | chr7_2:3945848-3945867 | None:intergenic | 30.0% | |
| ! | ATGCCTGATTTTATATTCCT+CGG | - | chr7_2:3945865-3945884 | Msa1044890:CDS | 30.0% |
| ATTGTGCATGCATTTATGTT+CGG | - | chr7_2:3945955-3945974 | Msa1044890:CDS | 30.0% | |
| TATCACATCAAGTGTTTGTG+TGG | - | chr7_2:3939629-3939648 | Msa1044890:CDS | 35.0% | |
| ATCACATCAAGTGTTTGTGT+GGG | - | chr7_2:3939630-3939649 | Msa1044890:CDS | 35.0% | |
| TTTGCTTCATAGAACGAACT+TGG | + | chr7_2:3939722-3939741 | None:intergenic | 35.0% | |
| CCAATAAAGCATACAATCGT+TGG | + | chr7_2:3939795-3939814 | None:intergenic | 35.0% | |
| CCAACGATTGTATGCTTTAT+TGG | - | chr7_2:3939792-3939811 | Msa1044890:CDS | 35.0% | |
| CACTTCAAAATGGAAATCAG+GGG | - | chr7_2:3939853-3939872 | Msa1044890:CDS | 35.0% | |
| AAAATGGAAATCAGGGGAAA+AGG | - | chr7_2:3939859-3939878 | Msa1044890:CDS | 35.0% | |
| ! | GAAAACAGTCTTTTCAATCG+AGG | + | chr7_2:3939947-3939966 | None:intergenic | 35.0% |
| !! | GCAGTTGATAATAACAACGA+TGG | - | chr7_2:3940001-3940020 | Msa1044890:intron | 35.0% |
| ATAACAACGATGGAATGATG+AGG | - | chr7_2:3940011-3940030 | Msa1044890:intron | 35.0% | |
| AATTTGACCTGAAACACAGT+TGG | - | chr7_2:3940062-3940081 | Msa1044890:intron | 35.0% | |
| TAGACATCGATATCATTTCC+TGG | + | chr7_2:3940271-3940290 | None:intergenic | 35.0% | |
| TAAATCTGTGTCTCTGATGA+AGG | + | chr7_2:3940543-3940562 | None:intergenic | 35.0% | |
| GTAAAAAGCCAAAGAAAGCA+GGG | - | chr7_2:3940671-3940690 | Msa1044890:CDS | 35.0% | |
| !!! | TCCTTTTTTTCTGGTTTGGA+GGG | + | chr7_2:3940738-3940757 | None:intergenic | 35.0% |
| ! | CTTTTCTTCTTCCAAATTGG+AGG | + | chr7_2:3940790-3940809 | None:intergenic | 35.0% |
| CTTTGAACTTCCATATTGGA+AGG | - | chr7_2:3940816-3940835 | Msa1044890:intron | 35.0% | |
| AGAAGATTGTCCTTCCAATA+TGG | + | chr7_2:3940829-3940848 | None:intergenic | 35.0% | |
| ! | CATTTTTCTCGATATGCATC+GGG | + | chr7_2:3940867-3940886 | None:intergenic | 35.0% |
| GCATATCGAGAAAAATGTGT+TGG | - | chr7_2:3940870-3940889 | Msa1044890:intron | 35.0% | |
| ! | TTCCATTTTCATTGCACCAA+AGG | + | chr7_2:3940990-3941009 | None:intergenic | 35.0% |
| CCAGTCAAAGTAAAAATTGC+CGG | + | chr7_2:3941021-3941040 | None:intergenic | 35.0% | |
| ! | TTTGACTGGTCAAAGTAAGA+GGG | - | chr7_2:3941032-3941051 | Msa1044890:CDS | 35.0% |
| ! | ATGTTGCTTGAATAACCATC+AGG | + | chr7_2:3941090-3941109 | None:intergenic | 35.0% |
| !! | CATTTCTAGATGCATTGACT+TGG | - | chr7_2:3941107-3941126 | Msa1044890:intron | 35.0% |
| !! | TTGGAAGCTCTTAAGTTGAA+AGG | - | chr7_2:3941126-3941145 | Msa1044890:intron | 35.0% |
| AACTTCTACCTTTAGCCATT+CGG | - | chr7_2:3941187-3941206 | Msa1044890:intron | 35.0% | |
| AATACTGCTGAAACTTCAGT+AGG | + | chr7_2:3941222-3941241 | None:intergenic | 35.0% | |
| GGCATAAAGTGAGGATAATT+TGG | + | chr7_2:3941320-3941339 | None:intergenic | 35.0% | |
| GAGGAAATATCATTTCCATG+TGG | + | chr7_2:3941341-3941360 | None:intergenic | 35.0% | |
| GTTGAAGAAGTTAAACTTGG+AGG | - | chr7_2:3941402-3941421 | Msa1044890:intron | 35.0% | |
| ATACATCCATCGATACTGAA+CGG | + | chr7_2:3941430-3941449 | None:intergenic | 35.0% | |
| GACATAATTTACCTTTCGAC+AGG | + | chr7_2:3941453-3941472 | None:intergenic | 35.0% | |
| GTAATAAAGCACAACCAGAA+GGG | - | chr7_2:3941575-3941594 | Msa1044890:intron | 35.0% | |
| AGATTCTTACATACGGTTCA+AGG | - | chr7_2:3941626-3941645 | Msa1044890:intron | 35.0% | |
| TGAGACTAAATGGAATCAAC+CGG | - | chr7_2:3941663-3941682 | Msa1044890:intron | 35.0% | |
| TTAGATAGTCCTCAACTACA+GGG | + | chr7_2:3941843-3941862 | None:intergenic | 35.0% | |
| ATTAGATAGTCCTCAACTAC+AGG | + | chr7_2:3941844-3941863 | None:intergenic | 35.0% | |
| ATACTTCTGTACTCCCTATT+TGG | + | chr7_2:3941936-3941955 | None:intergenic | 35.0% | |
| ! | TTCATAAAGAGTTTGCTCGT+TGG | - | chr7_2:3942012-3942031 | Msa1044890:intron | 35.0% |
| CAAACTCTGTGAACCTAAAT+GGG | + | chr7_2:3942065-3942084 | None:intergenic | 35.0% | |
| AACAATCTTGACACCATTGA+TGG | - | chr7_2:3942148-3942167 | Msa1044890:intron | 35.0% | |
| ATCTTTATCTGGTCCATCAA+TGG | + | chr7_2:3942164-3942183 | None:intergenic | 35.0% | |
| TTCACTGCATACAATGTCAA+TGG | - | chr7_2:3942229-3942248 | Msa1044890:CDS | 35.0% | |
| ! | ACACAAAACTGTGGAGTTTT+TGG | - | chr7_2:3942292-3942311 | Msa1044890:CDS | 35.0% |
| AATGATGCCCAAATGAGATT+TGG | - | chr7_2:3942346-3942365 | Msa1044890:intron | 35.0% | |
| GCCCATTCACATTTAAACAT+TGG | + | chr7_2:3942436-3942455 | None:intergenic | 35.0% | |
| TTTAATGCTTCTTGGGTTTG+TGG | + | chr7_2:3942464-3942483 | None:intergenic | 35.0% | |
| GGGTGGAAATGATGAAATTA+TGG | - | chr7_2:3942663-3942682 | Msa1044890:intron | 35.0% | |
| CAAACATCATCATCTGTAGT+CGG | + | chr7_2:3942766-3942785 | None:intergenic | 35.0% | |
| TAACAATCACAAGTACATCG+GGG | + | chr7_2:3942854-3942873 | None:intergenic | 35.0% | |
| TGCAAATAGCTAAGCAAAGT+AGG | + | chr7_2:3943003-3943022 | None:intergenic | 35.0% | |
| GCAAGTTCTTGAGAGATAAT+TGG | + | chr7_2:3943139-3943158 | None:intergenic | 35.0% | |
| TGAAGAGTTTATGCTTCATC+TGG | - | chr7_2:3943275-3943294 | Msa1044890:intron | 35.0% | |
| ! | ATCACGTACAAGTTGACATT+CGG | + | chr7_2:3943329-3943348 | None:intergenic | 35.0% |
| ATAACCTATAACGTGCGTTT+GGG | + | chr7_2:3943380-3943399 | None:intergenic | 35.0% | |
| AATAACCTATAACGTGCGTT+TGG | + | chr7_2:3943381-3943400 | None:intergenic | 35.0% | |
| !! | TTCTTTCTTTAGGTTGCGAA+TGG | - | chr7_2:3943801-3943820 | Msa1044890:intron | 35.0% |
| ATCTAGTGTTCCTATTTGTG+GGG | - | chr7_2:3944187-3944206 | Msa1044890:intron | 35.0% | |
| ! | CTGTTATTTGTTAGATGTGG+CGG | - | chr7_2:3944266-3944285 | Msa1044890:intron | 35.0% |
| ! | TGTTATTTGTTAGATGTGGC+GGG | - | chr7_2:3944267-3944286 | Msa1044890:intron | 35.0% |
| AAGAATCTCCAAATGGAACT+AGG | - | chr7_2:3944331-3944350 | Msa1044890:intron | 35.0% | |
| GTCATTATCCTAGTTCCATT+TGG | + | chr7_2:3944342-3944361 | None:intergenic | 35.0% | |
| AGCAAATTATTTGGGCCAAT+TGG | - | chr7_2:3944410-3944429 | Msa1044890:intron | 35.0% | |
| CTTTAAATTGCCTTGCCAAT+TGG | + | chr7_2:3944428-3944447 | None:intergenic | 35.0% | |
| TCCCATCTTTCAACCATTAT+CGG | + | chr7_2:3944456-3944475 | None:intergenic | 35.0% | |
| ! | ATGGGATGCTGCAATTTTAA+AGG | - | chr7_2:3944470-3944489 | Msa1044890:intron | 35.0% |
| TGATCTGGGTGAATAAAACT+TGG | + | chr7_2:3944771-3944790 | None:intergenic | 35.0% | |
| !! | GTTTTATTCACCCAGATCAT+TGG | - | chr7_2:3944772-3944791 | Msa1044890:intron | 35.0% |
| CAAAAACAACCCAATGATCT+GGG | + | chr7_2:3944785-3944804 | None:intergenic | 35.0% | |
| ACAAAAACAACCCAATGATC+TGG | + | chr7_2:3944786-3944805 | None:intergenic | 35.0% | |
| CAAAAAACTCCTCATACACT+AGG | - | chr7_2:3944945-3944964 | Msa1044890:intron | 35.0% | |
| !! | TCAGAAAAGATGAGTTGGTA+TGG | - | chr7_2:3944985-3945004 | Msa1044890:intron | 35.0% |
| ATATGGTCGAGAATATAGCA+GGG | - | chr7_2:3945136-3945155 | Msa1044890:intron | 35.0% | |
| ! | TTAATTTTAGGCGAGCTATG+AGG | + | chr7_2:3945280-3945299 | None:intergenic | 35.0% |
| CACTGTATTATTGCCTAAAG+AGG | - | chr7_2:3945314-3945333 | Msa1044890:intron | 35.0% | |
| TCATGAACTGTTGTATATGC+AGG | - | chr7_2:3945431-3945450 | Msa1044890:intron | 35.0% | |
| ATTTGCCAATGTGTTTGGAA+AGG | - | chr7_2:3945500-3945519 | Msa1044890:intron | 35.0% | |
| ATGTTCCTTTCCAAACACAT+TGG | + | chr7_2:3945508-3945527 | None:intergenic | 35.0% | |
| CTCCTTAAGAGAATCAATCT+CGG | + | chr7_2:3945646-3945665 | None:intergenic | 35.0% | |
| ! | GATTGATTCTCTTAAGGAGA+AGG | - | chr7_2:3945647-3945666 | Msa1044890:CDS | 35.0% |
| !! | TTCAGAAGTTGATGTCTTGA+AGG | - | chr7_2:3945671-3945690 | Msa1044890:CDS | 35.0% |
| !!! | CCTCTTTGTCTCTAGAATTT+TGG | + | chr7_2:3945728-3945747 | None:intergenic | 35.0% |
| ! | CCAAAATTCTAGAGACAAAG+AGG | - | chr7_2:3945725-3945744 | Msa1044890:intron | 35.0% |
| ATGCCGAGGAATATAAAATC+AGG | + | chr7_2:3945871-3945890 | None:intergenic | 35.0% | |
| !! | GCTTCTCTGTTTTAGACAAT+AGG | - | chr7_2:3945901-3945920 | Msa1044890:CDS | 35.0% |
| TTGTGCATGCATTTATGTTC+GGG | - | chr7_2:3945956-3945975 | Msa1044890:CDS | 35.0% | |
| TGATAGGGATCAGACAAATG+AGG | - | chr7_2:3939439-3939458 | Msa1044890:three_prime_UTR | 40.0% | |
| TTCCAAGTGTAAGCGAAGAA+AGG | - | chr7_2:3939507-3939526 | Msa1044890:three_prime_UTR | 40.0% | |
| TTCCTTTCTTCGCTTACACT+TGG | + | chr7_2:3939512-3939531 | None:intergenic | 40.0% | |
| GAGAACAACCCTTGTATGAA+GGG | - | chr7_2:3939567-3939586 | Msa1044890:three_prime_UTR | 40.0% | |
| CTTGTACACCCTTCATACAA+GGG | + | chr7_2:3939578-3939597 | None:intergenic | 40.0% | |
| TCTTGTACACCCTTCATACA+AGG | + | chr7_2:3939579-3939598 | None:intergenic | 40.0% | |
| !! | ATCCTAGAGATTCTGAAGCT+TGG | - | chr7_2:3940035-3940054 | Msa1044890:intron | 40.0% |
| TTCCAAGCTTCAGAATCTCT+AGG | + | chr7_2:3940040-3940059 | None:intergenic | 40.0% | |
| ATGCAAACCAACTGTGTTTC+AGG | + | chr7_2:3940072-3940091 | None:intergenic | 40.0% | |
| ! | AGTGACGGCTTTAATCCATT+TGG | - | chr7_2:3940124-3940143 | Msa1044890:intron | 40.0% |
| ATTCCTGGTAAATATTCGCC+AGG | - | chr7_2:3940250-3940269 | Msa1044890:CDS | 40.0% | |
| TTTCCTGGCGAATATTTACC+AGG | + | chr7_2:3940256-3940275 | None:intergenic | 40.0% | |
| CTACTTACAACCTCTAGTCA+AGG | - | chr7_2:3940288-3940307 | Msa1044890:intron | 40.0% | |
| TCAAGGAGTTGAAGGAGTTA+TGG | - | chr7_2:3940305-3940324 | Msa1044890:intron | 40.0% | |
| TTGAAGGAGTTATGGACAAC+TGG | - | chr7_2:3940313-3940332 | Msa1044890:intron | 40.0% | |
| AAGACGACAAGGTTTAGTGT+CGG | + | chr7_2:3940479-3940498 | None:intergenic | 40.0% | |
| TTGAACAAGGTTCGCTTTGA+TGG | - | chr7_2:3940565-3940584 | Msa1044890:intron | 40.0% | |
| TGATGTCCAGATAACGTTAC+CGG | + | chr7_2:3940613-3940632 | None:intergenic | 40.0% | |
| TGGACATCAAGTTCTTCAAC+AGG | - | chr7_2:3940624-3940643 | Msa1044890:CDS | 40.0% | |
| GGTAAAAAGCCAAAGAAAGC+AGG | - | chr7_2:3940670-3940689 | Msa1044890:CDS | 40.0% | |
| GCAGGGTTGGGAAAAAAAAA+AGG | - | chr7_2:3940688-3940707 | Msa1044890:CDS | 40.0% | |
| ACCCTCCAAACCAGAAAAAA+AGG | - | chr7_2:3940734-3940753 | Msa1044890:CDS | 40.0% | |
| !!! | GTCCTTTTTTTCTGGTTTGG+AGG | + | chr7_2:3940739-3940758 | None:intergenic | 40.0% |
| !!! | CCTGTCCTTTTTTTCTGGTT+TGG | + | chr7_2:3940742-3940761 | None:intergenic | 40.0% |
| CCAAACCAGAAAAAAAGGAC+AGG | - | chr7_2:3940739-3940758 | Msa1044890:CDS | 40.0% | |
| !!! | TCTTGCCTGTCCTTTTTTTC+TGG | + | chr7_2:3940747-3940766 | None:intergenic | 40.0% |
| AGAAAAAAAGGACAGGCAAG+AGG | - | chr7_2:3940746-3940765 | Msa1044890:CDS | 40.0% | |
| ATCTTATGCCCATAGCTTCA+AGG | + | chr7_2:3940963-3940982 | None:intergenic | 40.0% | |
| ! | GACCTTTGGTGCAATGAAAA+TGG | - | chr7_2:3940985-3941004 | Msa1044890:CDS | 40.0% |
| ! | CCGGCAATTTTTACTTTGAC+TGG | - | chr7_2:3941018-3941037 | Msa1044890:CDS | 40.0% |
| ! | CTTTGACTGGTCAAAGTAAG+AGG | - | chr7_2:3941031-3941050 | Msa1044890:CDS | 40.0% |
| AAGAATATCACAGTGCCTGA+TGG | - | chr7_2:3941072-3941091 | Msa1044890:CDS | 40.0% | |
| TCATGATGGCCACATATTGA+TGG | - | chr7_2:3941161-3941180 | Msa1044890:intron | 40.0% | |
| ! | GAAGTTGGTCCATCAATATG+TGG | + | chr7_2:3941173-3941192 | None:intergenic | 40.0% |
| GAATGGCTAAAGGTAGAAGT+TGG | + | chr7_2:3941188-3941207 | None:intergenic | 40.0% | |
| AATGTTGTCCGAATGGCTAA+AGG | + | chr7_2:3941198-3941217 | None:intergenic | 40.0% | |
| AGTAGGTAATGTTGTCCGAA+TGG | + | chr7_2:3941205-3941224 | None:intergenic | 40.0% | |
| TATCCTCACTTTATGCCACA+TGG | - | chr7_2:3941323-3941342 | Msa1044890:intron | 40.0% | |
| TTTCCATGTGGCATAAAGTG+AGG | + | chr7_2:3941329-3941348 | None:intergenic | 40.0% | |
| ATGACAGTGAAGAATGATGG+AGG | + | chr7_2:3941360-3941379 | None:intergenic | 40.0% | |
| TCCATCATTCTTCACTGTCA+TGG | - | chr7_2:3941359-3941378 | Msa1044890:intron | 40.0% | |
| ACCATGACAGTGAAGAATGA+TGG | + | chr7_2:3941363-3941382 | None:intergenic | 40.0% | |
| TACATCCATCGATACTGAAC+GGG | + | chr7_2:3941429-3941448 | None:intergenic | 40.0% | |
| CGTAATAAAGCACAACCAGA+AGG | - | chr7_2:3941574-3941593 | Msa1044890:intron | 40.0% | |
| ! | ACATACGGTTCAAGGTATCT+AGG | - | chr7_2:3941634-3941653 | Msa1044890:intron | 40.0% |
| GAGACTAAATGGAATCAACC+GGG | - | chr7_2:3941664-3941683 | Msa1044890:intron | 40.0% | |
| GCCGAATTATTTCCTAGAGT+TGG | - | chr7_2:3941736-3941755 | Msa1044890:intron | 40.0% | |
| ! | CCAATAGGTTTTCCAACTCT+AGG | + | chr7_2:3941751-3941770 | None:intergenic | 40.0% |
| CCTAGAGTTGGAAAACCTAT+TGG | - | chr7_2:3941748-3941767 | Msa1044890:intron | 40.0% | |
| AGAGTTGGAAAACCTATTGG+TGG | - | chr7_2:3941751-3941770 | Msa1044890:intron | 40.0% | |
| TAACGTGAAGATCCACCAAT+AGG | + | chr7_2:3941766-3941785 | None:intergenic | 40.0% | |
| GTATGATACGAAGTCAGCTA+AGG | - | chr7_2:3941952-3941971 | Msa1044890:intron | 40.0% | |
| !! | TACTTCTGAGGTAGACAAGA+AGG | - | chr7_2:3941989-3942008 | Msa1044890:intron | 40.0% |
| GCAAACTCTGTGAACCTAAA+TGG | + | chr7_2:3942066-3942085 | None:intergenic | 40.0% | |
| !! | GTTCTCATTAGTCTTGCTCA+AGG | - | chr7_2:3942184-3942203 | Msa1044890:intron | 40.0% |
| ATGCCCAAATGAGATTTGGA+GGG | - | chr7_2:3942350-3942369 | Msa1044890:intron | 40.0% | |
| ATCATTGAGCTTCGGTATGA+TGG | - | chr7_2:3942400-3942419 | Msa1044890:intron | 40.0% | |
| CTCATCATCTTCATGTTGTC+CGG | + | chr7_2:3942536-3942555 | None:intergenic | 40.0% | |
| ATGATGAGAAGGAAGAAGGA+TGG | - | chr7_2:3942599-3942618 | Msa1044890:intron | 40.0% | |
| TCTCTTGGCTTCAAATGAAC+AGG | + | chr7_2:3942631-3942650 | None:intergenic | 40.0% | |
| CCAAGAGACTTGTATGACAT+GGG | - | chr7_2:3942643-3942662 | Msa1044890:intron | 40.0% | |
| GCAAGCAAAGTTCGAAAGAA+TGG | - | chr7_2:3943078-3943097 | Msa1044890:intron | 40.0% | |
| !!! | ACGTTTTGAAGTGGCAGAAT+AGG | + | chr7_2:3943167-3943186 | None:intergenic | 40.0% |
| TGGATAGAACTGTCAAACTG+TGG | - | chr7_2:3943697-3943716 | Msa1044890:intron | 40.0% | |
| CATGTGGTAAACCTTGTGAA+CGG | + | chr7_2:3943881-3943900 | None:intergenic | 40.0% | |
| CATGTGGTAAACCTTGTGAA+CGG | + | chr7_2:3943881-3943900 | None:intergenic | 40.0% | |
| GGATCTGTAACATGATCATG+CGG | + | chr7_2:3943978-3943997 | None:intergenic | 40.0% | |
| AAAGAAACCAAGATACTGGG+AGG | - | chr7_2:3944145-3944164 | Msa1044890:intron | 40.0% | |
| AAAAACACAGCCCCACAAAT+AGG | + | chr7_2:3944200-3944219 | None:intergenic | 40.0% | |
| !!! | GGCTGTGTTTTTTCTCTTGT+TGG | - | chr7_2:3944208-3944227 | Msa1044890:intron | 40.0% |
| TTCAAGGAGACGTTTAACAG+TGG | - | chr7_2:3944296-3944315 | Msa1044890:intron | 40.0% | |
| GTGCTTGAAGAATCTCCAAA+TGG | - | chr7_2:3944324-3944343 | Msa1044890:intron | 40.0% | |
| GAACTAGGATAATGACTCGA+TGG | - | chr7_2:3944346-3944365 | Msa1044890:intron | 40.0% | |
| ATGGAATGATGTTCCTCAAC+CGG | - | chr7_2:3944365-3944384 | Msa1044890:intron | 40.0% | |
| ATTATTTGGGCCAATTGGCA+AGG | - | chr7_2:3944415-3944434 | Msa1044890:intron | 40.0% | |
| ! | TCCCGATAATGGTTGAAAGA+TGG | - | chr7_2:3944451-3944470 | Msa1044890:intron | 40.0% |
| CCCATCTTTCAACCATTATC+GGG | + | chr7_2:3944455-3944474 | None:intergenic | 40.0% | |
| ! | CCCGATAATGGTTGAAAGAT+GGG | - | chr7_2:3944452-3944471 | Msa1044890:intron | 40.0% |
| !! | TCTCTAGCCTTGGAAAGAAA+TGG | - | chr7_2:3944667-3944686 | Msa1044890:intron | 40.0% |
| ! | TAGCCTTGGAAAGAAATGGA+AGG | - | chr7_2:3944671-3944690 | Msa1044890:intron | 40.0% |
| CATCCTTCCATTTCTTTCCA+AGG | + | chr7_2:3944677-3944696 | None:intergenic | 40.0% | |
| CTTGGAAAGAAATGGAAGGA+TGG | - | chr7_2:3944675-3944694 | Msa1044890:intron | 40.0% | |
| CAAATGGGAACTCACATTAG+AGG | - | chr7_2:3944725-3944744 | Msa1044890:intron | 40.0% | |
| TGCGATCAGAAAAGATGAGT+TGG | - | chr7_2:3944980-3944999 | Msa1044890:intron | 40.0% | |
| TCTGTGTATGCAATCTCATC+TGG | - | chr7_2:3945045-3945064 | Msa1044890:intron | 40.0% | |
| GATATGGTCGAGAATATAGC+AGG | - | chr7_2:3945135-3945154 | Msa1044890:intron | 40.0% | |
| TATGGTCGAGAATATAGCAG+GGG | - | chr7_2:3945137-3945156 | Msa1044890:intron | 40.0% | |
| TGTTTCGCTTAAAGATGCCA+AGG | - | chr7_2:3945172-3945191 | Msa1044890:intron | 40.0% | |
| GTTTCGCTTAAAGATGCCAA+GGG | - | chr7_2:3945173-3945192 | Msa1044890:intron | 40.0% | |
| ! | GAAGCATTTGCCAATGTGTT+TGG | - | chr7_2:3945495-3945514 | Msa1044890:intron | 40.0% |
| !! | CATTTTCTCATTAGCCTCGA+TGG | + | chr7_2:3945610-3945629 | None:intergenic | 40.0% |
| ! | AGCCGAGATTGATTCTCTTA+AGG | - | chr7_2:3945641-3945660 | Msa1044890:intron | 40.0% |
| ! | CAGTTGATTTAGGTCCACTT+GGG | + | chr7_2:3945815-3945834 | None:intergenic | 40.0% |
| ! | ACGATGCGTTTGGAGTTGAT+AGG | - | chr7_2:3939423-3939442 | Msa1044890:three_prime_UTR | 45.0% |
| !! | CGATGCGTTTGGAGTTGATA+GGG | - | chr7_2:3939424-3939443 | Msa1044890:three_prime_UTR | 45.0% |
| GGAGAACAACCCTTGTATGA+AGG | - | chr7_2:3939566-3939585 | Msa1044890:three_prime_UTR | 45.0% | |
| ATACAATCGTTGGGACATGC+AGG | + | chr7_2:3939785-3939804 | None:intergenic | 45.0% | |
| ATTGGGGTGAAGATGAAGAC+AGG | - | chr7_2:3939810-3939829 | Msa1044890:CDS | 45.0% | |
| TTGGGGTGAAGATGAAGACA+GGG | - | chr7_2:3939811-3939830 | Msa1044890:CDS | 45.0% | |
| TTCTTCATCAAAGACTGCCG+AGG | - | chr7_2:3939964-3939983 | Msa1044890:intron | 45.0% | |
| TGCATGCCATCTCATATCCT+CGG | + | chr7_2:3939984-3940003 | None:intergenic | 45.0% | |
| AATGCAAGACGCAAGTTTCG+CGG | + | chr7_2:3940100-3940119 | None:intergenic | 45.0% | |
| CGTCTTGCATTAGCTAGTGA+CGG | - | chr7_2:3940109-3940128 | Msa1044890:intron | 45.0% | |
| TTGTATGGGATGAGCACAAC+TGG | + | chr7_2:3940178-3940197 | None:intergenic | 45.0% | |
| GTATCTTTCATGCACACCCA+TGG | + | chr7_2:3940208-3940227 | None:intergenic | 45.0% | |
| ACCTCTAGTCAAGGAGTTGA+AGG | - | chr7_2:3940297-3940316 | Msa1044890:intron | 45.0% | |
| TCCTTCAACTCCTTGACTAG+AGG | + | chr7_2:3940301-3940320 | None:intergenic | 45.0% | |
| CATTACACGCAACCTTGATG+TGG | - | chr7_2:3940374-3940393 | Msa1044890:intron | 45.0% | |
| GTCACTAATCGTCCACATCA+AGG | + | chr7_2:3940389-3940408 | None:intergenic | 45.0% | |
| GTGGACGATTAGTGACTTTC+CGG | - | chr7_2:3940393-3940412 | Msa1044890:intron | 45.0% | |
| TGGACGATTAGTGACTTTCC+GGG | - | chr7_2:3940394-3940413 | Msa1044890:intron | 45.0% | |
| ATTAGTGACTTTCCGGGCTT+AGG | - | chr7_2:3940400-3940419 | Msa1044890:intron | 45.0% | |
| ! | GCTTAGGTATGCTTTCTGGT+TGG | - | chr7_2:3940416-3940435 | Msa1044890:CDS | 45.0% |
| TCTGGTTGGAACACATACAC+CGG | - | chr7_2:3940430-3940449 | Msa1044890:CDS | 45.0% | |
| ACACGAAGGACATGCAAAAC+CGG | + | chr7_2:3940452-3940471 | None:intergenic | 45.0% | |
| !! | TTAGTGTCGGTGTTACACGA+AGG | + | chr7_2:3940466-3940485 | None:intergenic | 45.0% |
| AAAGCCAAAGAAAGCAGGGT+TGG | - | chr7_2:3940675-3940694 | Msa1044890:CDS | 45.0% | |
| AAGCCAAAGAAAGCAGGGTT+GGG | - | chr7_2:3940676-3940695 | Msa1044890:CDS | 45.0% | |
| TTTCCCAACCCTGCTTTCTT+TGG | + | chr7_2:3940682-3940701 | None:intergenic | 45.0% | |
| GGCAAGAAACAACCTACACA+AGG | - | chr7_2:3940709-3940728 | Msa1044890:CDS | 45.0% | |
| CAGAAGATGACCCTCCAATT+TGG | - | chr7_2:3940776-3940795 | Msa1044890:intron | 45.0% | |
| TCGAAGAGACCTTGAAGCTA+TGG | - | chr7_2:3940951-3940970 | Msa1044890:CDS | 45.0% | |
| CGAAGAGACCTTGAAGCTAT+GGG | - | chr7_2:3940952-3940971 | Msa1044890:CDS | 45.0% | |
| TGGGCATAAGATCTGACCTT+TGG | - | chr7_2:3940971-3940990 | Msa1044890:CDS | 45.0% | |
| GGAACGTTGAAGAGTCATGA+TGG | - | chr7_2:3941147-3941166 | Msa1044890:intron | 45.0% | |
| CTTCACTGTCATGGTTCACT+TGG | - | chr7_2:3941368-3941387 | Msa1044890:intron | 45.0% | |
| GATGGATGTATCCTGTCGAA+AGG | - | chr7_2:3941439-3941458 | Msa1044890:intron | 45.0% | |
| CAGAAGGGTCTATTGCAGAA+GGG | - | chr7_2:3941590-3941609 | Msa1044890:intron | 45.0% | |
| GAAATAATTCGGCTACACGC+GGG | + | chr7_2:3941729-3941748 | None:intergenic | 45.0% | |
| GGAAATAATTCGGCTACACG+CGG | + | chr7_2:3941730-3941749 | None:intergenic | 45.0% | |
| AACAAACTGCCCTGTAGTTG+AGG | - | chr7_2:3941831-3941850 | Msa1044890:intron | 45.0% | |
| TAGTGCAAGGACTACTTCTG+AGG | - | chr7_2:3941977-3941996 | Msa1044890:intron | 45.0% | |
| !!! | TGTGGAGTTTTTGGCGTGTT+TGG | - | chr7_2:3942301-3942320 | Msa1044890:CDS | 45.0% |
| !!! | GTGGAGTTTTTGGCGTGTTT+GGG | - | chr7_2:3942302-3942321 | Msa1044890:CDS | 45.0% |
| GATGCCCAAATGAGATTTGG+AGG | - | chr7_2:3942349-3942368 | Msa1044890:intron | 45.0% | |
| TGCCCAAATGAGATTTGGAG+GGG | - | chr7_2:3942351-3942370 | Msa1044890:intron | 45.0% | |
| CACCCCTCCAAATCTCATTT+GGG | + | chr7_2:3942356-3942375 | None:intergenic | 45.0% | |
| GCTTCTGACGCTGTAATGAA+TGG | + | chr7_2:3942559-3942578 | None:intergenic | 45.0% | |
| TACAGCGTCAGAAGCTCAAA+TGG | - | chr7_2:3942564-3942583 | Msa1044890:intron | 45.0% | |
| GTGGATGATGAGAAGGAAGA+AGG | - | chr7_2:3942595-3942614 | Msa1044890:intron | 45.0% | |
| GCCAAGAGACTTGTATGACA+TGG | - | chr7_2:3942642-3942661 | Msa1044890:intron | 45.0% | |
| CCCATGTCATACAAGTCTCT+TGG | + | chr7_2:3942646-3942665 | None:intergenic | 45.0% | |
| AGAGACTTGTATGACATGGG+TGG | - | chr7_2:3942646-3942665 | Msa1044890:intron | 45.0% | |
| !! | TGTGATGGGTATGGCTCAAT+GGG | + | chr7_2:3942691-3942710 | None:intergenic | 45.0% |
| !! | TTGTGATGGGTATGGCTCAA+TGG | + | chr7_2:3942692-3942711 | None:intergenic | 45.0% |
| TCGAACTTTGCTTGCTCGTA+TGG | + | chr7_2:3943073-3943092 | None:intergenic | 45.0% | |
| CGAAATTAGTGAGACTGACG+TGG | + | chr7_2:3943303-3943322 | None:intergenic | 45.0% | |
| !!! | TGAACGGAGGCGCTTTTTAT+TGG | + | chr7_2:3943865-3943884 | None:intergenic | 45.0% |
| GTAACATGATCATGCGGTGA+AGG | + | chr7_2:3943972-3943991 | None:intergenic | 45.0% | |
| !! | TATGGAGGTGTCTCATGTGT+GGG | + | chr7_2:3944005-3944024 | None:intergenic | 45.0% |
| GTAACATGTGTAGGCTATGG+AGG | + | chr7_2:3944020-3944039 | None:intergenic | 45.0% | |
| GGTGTAACATGTGTAGGCTA+TGG | + | chr7_2:3944023-3944042 | None:intergenic | 45.0% | |
| ! | GGTGAAGGTGTAACATGTGT+AGG | + | chr7_2:3944029-3944048 | None:intergenic | 45.0% |
| ! | TGTGTAGGTGTCACATGTGT+AGG | + | chr7_2:3944050-3944069 | None:intergenic | 45.0% |
| ! | AGGTACGGACTATCATGTGT+AGG | + | chr7_2:3944065-3944084 | None:intergenic | 45.0% |
| ACACATGATAGTCCGTACCT+TGG | - | chr7_2:3944065-3944084 | Msa1044890:intron | 45.0% | |
| ACATCAACCTCCCAGTATCT+TGG | + | chr7_2:3944155-3944174 | None:intergenic | 45.0% | |
| AATGATGTTCCTCAACCGGT+GGG | - | chr7_2:3944369-3944388 | Msa1044890:intron | 45.0% | |
| AATTTAGCAGATTGCCCCAC+CGG | + | chr7_2:3944387-3944406 | None:intergenic | 45.0% | |
| GAGTCAGTTCCTAGTGTATG+AGG | + | chr7_2:3944957-3944976 | None:intergenic | 45.0% | |
| GTGTTTGGAAAGGAACATGC+TGG | - | chr7_2:3945510-3945529 | Msa1044890:intron | 45.0% | |
| TGCTGGATATGTCCGTTCTA+TGG | - | chr7_2:3945527-3945546 | Msa1044890:intron | 45.0% | |
| GCTGGATATGTCCGTTCTAT+GGG | - | chr7_2:3945528-3945547 | Msa1044890:intron | 45.0% | |
| CTGGATATGTCCGTTCTATG+GGG | - | chr7_2:3945529-3945548 | Msa1044890:intron | 45.0% | |
| TTATGCCAAGCCCCATAGAA+CGG | + | chr7_2:3945542-3945561 | None:intergenic | 45.0% | |
| ! | GCAGTTGATTTAGGTCCACT+TGG | + | chr7_2:3945816-3945835 | None:intergenic | 45.0% |
| ACCTAAATCAACTGCCTGAG+TGG | - | chr7_2:3945821-3945840 | Msa1044890:CDS | 45.0% | |
| ! | TCCACTCAGGCAGTTGATTT+AGG | + | chr7_2:3945825-3945844 | None:intergenic | 45.0% |
| AAGCTGAACTATGTATGCCG+AGG | + | chr7_2:3945885-3945904 | None:intergenic | 45.0% | |
| AGACTGCCGAGGATATGAGA+TGG | - | chr7_2:3939975-3939994 | Msa1044890:intron | 50.0% | |
| TCCCATACAACACTCCTCCA+TGG | - | chr7_2:3940188-3940207 | Msa1044890:CDS | 50.0% | |
| !! | CCCATGGAGGAGTGTTGTAT+GGG | + | chr7_2:3940192-3940211 | None:intergenic | 50.0% |
| CCCATACAACACTCCTCCAT+GGG | - | chr7_2:3940189-3940208 | Msa1044890:CDS | 50.0% | |
| !! | ACCCATGGAGGAGTGTTGTA+TGG | + | chr7_2:3940193-3940212 | None:intergenic | 50.0% |
| TCTTTCATGCACACCCATGG+AGG | + | chr7_2:3940205-3940224 | None:intergenic | 50.0% | |
| GGAGTTATGGACAACTGGTG+TGG | - | chr7_2:3940318-3940337 | Msa1044890:intron | 50.0% | |
| ! | CCAGAAAGCATACCTAAGCC+CGG | + | chr7_2:3940415-3940434 | None:intergenic | 50.0% |
| GCAAGAAATGCGTAGTCCAC+CGG | - | chr7_2:3940591-3940610 | Msa1044890:CDS | 50.0% | |
| AGTCCACCGGTAACGTTATC+TGG | - | chr7_2:3940604-3940623 | Msa1044890:CDS | 50.0% | |
| TGTCCAGATAACGTTACCGG+TGG | + | chr7_2:3940610-3940629 | None:intergenic | 50.0% | |
| TTTGGAGGGTCACCTTGTGT+AGG | + | chr7_2:3940724-3940743 | None:intergenic | 50.0% | |
| GGTCTCTTCGAGCATCAACA+TGG | + | chr7_2:3940942-3940961 | None:intergenic | 50.0% | |
| CCTTCTGCAATAGACCCTTC+TGG | + | chr7_2:3941592-3941611 | None:intergenic | 50.0% | |
| CCAGAAGGGTCTATTGCAGA+AGG | - | chr7_2:3941589-3941608 | Msa1044890:intron | 50.0% | |
| GTCAGCTAAGGAGTAGTGCA+AGG | - | chr7_2:3941964-3941983 | Msa1044890:intron | 50.0% | |
| GCACCCCTCCAAATCTCATT+TGG | + | chr7_2:3942357-3942376 | None:intergenic | 50.0% | |
| !! | TTTGGAGGGGTGCCTTACTA+TGG | - | chr7_2:3942364-3942383 | Msa1044890:intron | 50.0% |
| ! | TGATGGGTATGGCTCAATGG+GGG | + | chr7_2:3942689-3942708 | None:intergenic | 50.0% |
| !! | GTGATGGGTATGGCTCAATG+GGG | + | chr7_2:3942690-3942709 | None:intergenic | 50.0% |
| TCAGCCCAAACGCACGTTAT+AGG | - | chr7_2:3943373-3943392 | Msa1044890:intron | 50.0% | |
| !! | AAAAAGCGCCTCCGTTCACA+AGG | - | chr7_2:3943867-3943886 | Msa1044890:intron | 50.0% |
| GTGGTAAACCTTGTGAACGG+AGG | + | chr7_2:3943878-3943897 | None:intergenic | 50.0% | |
| ! | CGCTTCTTATTGGCTGCATG+TGG | + | chr7_2:3943897-3943916 | None:intergenic | 50.0% |
| !! | TGAACGGAGGCGCTTCTTAT+TGG | + | chr7_2:3943907-3943926 | None:intergenic | 50.0% |
| GTGGTAAACCTTGTGAACGG+AGG | + | chr7_2:3943878-3943897 | None:intergenic | 50.0% | |
| !! | GGTGAAGGTGTCACATGTGT+AGG | + | chr7_2:3943957-3943976 | None:intergenic | 50.0% |
| !! | CTATGGAGGTGTCTCATGTG+TGG | + | chr7_2:3944006-3944025 | None:intergenic | 50.0% |
| ! | GGTGTCACATGTGTAGGTGA+AGG | + | chr7_2:3944044-3944063 | None:intergenic | 50.0% |
| TCATCTCCAGAGCCAAGGTA+CGG | + | chr7_2:3944080-3944099 | None:intergenic | 50.0% | |
| CATCATCATCTCCAGAGCCA+AGG | + | chr7_2:3944085-3944104 | None:intergenic | 50.0% | |
| !! | ATGTGGCGGGTCATACTTCA+AGG | - | chr7_2:3944280-3944299 | Msa1044890:intron | 50.0% |
| GAATGATGTTCCTCAACCGG+TGG | - | chr7_2:3944368-3944387 | Msa1044890:intron | 50.0% | |
| ATGATGTTCCTCAACCGGTG+GGG | - | chr7_2:3944370-3944389 | Msa1044890:intron | 50.0% | |
| TAGGAGGAAGGCTGAACAAG+TGG | - | chr7_2:3944812-3944831 | Msa1044890:intron | 50.0% | |
| TATGTCCGTTCTATGGGGCT+TGG | - | chr7_2:3945534-3945553 | Msa1044890:intron | 50.0% | |
| GAGCGACTAGAGATTCGAGA+TGG | + | chr7_2:3945567-3945586 | None:intergenic | 50.0% | |
| ! | ATTAGCCTCGTCTTCCATCG+AGG | - | chr7_2:3945593-3945612 | Msa1044890:intron | 50.0% |
| ! | ATTAGCCTCGATGGAAGACG+AGG | + | chr7_2:3945601-3945620 | None:intergenic | 50.0% |
| ! | ACTTCGCTTTAGGTCCACTC+AGG | + | chr7_2:3945838-3945857 | None:intergenic | 50.0% |
| CCGGGCTTAGGTATGCTTTC+TGG | - | chr7_2:3940412-3940431 | Msa1044890:CDS | 55.0% | |
| ! | GAGGTCCCGTTCAGTATCGA+TGG | - | chr7_2:3941421-3941440 | Msa1044890:intron | 55.0% |
| TGTACAACCCGGAGCTCTTG+AGG | - | chr7_2:3943836-3943855 | Msa1044890:intron | 55.0% | |
| ATTGGCTGCCTCAAGAGCTC+CGG | + | chr7_2:3943847-3943866 | None:intergenic | 55.0% | |
| !! | AAGAAGCGCCTCCGTTCACA+AGG | - | chr7_2:3943909-3943928 | Msa1044890:intron | 55.0% |
| GTAGGCTGTGAAGCTGCATG+TGG | + | chr7_2:3943939-3943958 | None:intergenic | 55.0% | |
| GATAGTCCGTACCTTGGCTC+TGG | - | chr7_2:3944071-3944090 | Msa1044890:intron | 55.0% | |
| GGCTCATCGTCTACACGACC+CGG | + | chr7_2:3941685-3941704 | None:intergenic | 60.0% | |
| TTGGCTGCCTCAAGAGCTCC+GGG | + | chr7_2:3943846-3943865 | None:intergenic | 60.0% | |
| GGTGTCTCATGTGTGGGTGG+TGG | + | chr7_2:3943999-3944018 | None:intergenic | 60.0% | |
| !! | GGAGGTGTCTCATGTGTGGG+TGG | + | chr7_2:3944002-3944021 | None:intergenic | 60.0% |
| ! | GCAGATTGCCCCACCGGTTG+AGG | + | chr7_2:3944381-3944400 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 3939416 | 3945988 | 3939416 | ID=Msa1044890;Name=Msa1044890 |
| chr7_2 | mRNA | 3939416 | 3945988 | 3939416 | ID=Msa1044890-mRNA-1;Parent=Msa1044890;Name=Msa1044890-mRNA-1;_AED=0.22;_eAED=0.29;_QI=0|0.5|0.55|1|0.62|0.66|9|194|502 |
| chr7_2 | exon | 3939416 | 3939951 | 3939416 | ID=Msa1044890-mRNA-1:exon:945;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3940175 | 3940276 | 3940175 | ID=Msa1044890-mRNA-1:exon:944;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3940403 | 3940495 | 3940403 | ID=Msa1044890-mRNA-1:exon:943;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3940571 | 3940783 | 3940571 | ID=Msa1044890-mRNA-1:exon:942;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3940877 | 3941124 | 3940877 | ID=Msa1044890-mRNA-1:exon:941;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3941516 | 3941591 | 3941516 | ID=Msa1044890-mRNA-1:exon:940;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3942206 | 3942349 | 3942206 | ID=Msa1044890-mRNA-1:exon:939;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3945643 | 3945709 | 3945643 | ID=Msa1044890-mRNA-1:exon:938;Parent=Msa1044890-mRNA-1 |
| chr7_2 | exon | 3945765 | 3945988 | 3945765 | ID=Msa1044890-mRNA-1:exon:937;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3945765 | 3945988 | 3945765 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3945643 | 3945709 | 3945643 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3942206 | 3942349 | 3942206 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3941516 | 3941591 | 3941516 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3940877 | 3941124 | 3940877 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3940571 | 3940783 | 3940571 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3940403 | 3940495 | 3940403 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3940175 | 3940276 | 3940175 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | CDS | 3939610 | 3939951 | 3939610 | ID=Msa1044890-mRNA-1:cds;Parent=Msa1044890-mRNA-1 |
| chr7_2 | three_prime_UTR | 3939416 | 3939609 | 3939416 | ID=Msa1044890-mRNA-1:three_prime_utr;Parent=Msa1044890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
