AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1051910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1051910 MtrunA17_Chr7g0221561 90.987 699 21 2 1 699 553 1209 0.0 1310
Msa1051910 MtrunA17_Chr4g0066831 83.924 367 58 1 334 699 670 1036 0.0 672
Msa1051910 MtrunA17_Chr4g0066831 57.085 247 78 3 1 247 454 672 2.16e-71 251
Msa1051910 MtrunA17_Chr2g0313161 61.620 284 50 5 383 666 1 225 8.60e-107 324
Msa1051910 MtrunA17_Chr4g0068041 43.425 327 171 6 373 696 126 441 1.16e-76 253
Msa1051910 MtrunA17_Chr2g0309811 42.089 316 170 6 381 693 48 353 1.61e-68 228
Msa1051910 MtrunA17_Chr2g0309771 41.509 265 145 4 431 693 38 294 1.46e-58 200
Msa1051910 MtrunA17_Chr6g0488241 41.481 270 147 5 431 697 38 299 4.95e-58 198
Msa1051910 MtrunA17_Chr2g0303611 47.403 154 74 4 373 525 47 194 1.08e-33 128
Msa1051910 MtrunA17_Chr2g0309841 45.890 146 73 3 381 525 48 188 4.91e-32 124
Msa1051910 MtrunA17_Chr2g0303621 36.471 170 102 2 529 696 2 167 1.38e-25 103
Msa1051910 MtrunA17_Chr2g0309831 38.125 160 92 3 536 693 1 155 6.81e-24 99.0
Msa1051910 MtrunA17_Chr2g0309901 51.852 54 26 0 437 490 1 54 2.29e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1051910 AT2G33540.1 54.633 723 268 18 1 695 549 1239 0.0 684
Msa1051910 AT2G33540.2 54.633 723 268 18 1 695 292 982 0.0 684
Msa1051910 AT5G58003.3 45.714 315 161 6 387 696 65 374 1.36e-81 264
Msa1051910 AT5G58003.2 45.714 315 161 6 387 696 45 354 1.40e-81 263
Msa1051910 AT5G58003.1 45.714 315 161 6 387 696 121 430 3.24e-81 265
Msa1051910 AT2G04930.1 36.444 225 123 5 387 604 65 276 4.24e-34 132
Msa1051910 AT5G54210.1 37.104 221 131 3 375 595 75 287 3.17e-33 130
Msa1051910 AT3G17550.1 35.714 238 131 6 375 607 72 292 9.64e-32 125
Msa1051910 AT1G20320.1 37.179 234 124 7 375 603 63 278 1.90e-31 126
Msa1051910 AT3G19595.1 34.862 218 124 5 387 599 90 294 8.95e-30 120
Msa1051910 AT1G43600.1 36.866 217 118 5 389 603 19 218 3.40e-29 116
Msa1051910 AT1G43610.1 37.273 220 119 5 387 604 51 253 4.70e-29 117
Msa1051910 AT3G19600.1 34.862 218 124 5 387 599 384 588 3.79e-28 120
Msa1051910 AT3G19600.1 34.361 227 135 5 375 596 75 292 1.20e-26 115
Msa1051910 AT2G02290.1 35.088 228 132 7 375 599 73 287 2.50e-27 113
Msa1051910 AT5G23470.1 35.185 216 124 6 387 599 85 287 1.78e-26 110

Find 276 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAGAAGAGTGGGATTT+TGG 0.115460 7_2:-19778655 Msa1051910:CDS
CAACATCTGCCCATGTATTC+TGG 0.153568 7_2:+19778277 None:intergenic
TGTTATACAAATTCAATTAT+AGG 0.156885 7_2:+19775637 None:intergenic
TTATGTTGCCTATTCAATTT+TGG 0.166210 7_2:-19775213 Msa1051910:three_prime_UTR
GGAACTCTGGCATCCTCTTT+GGG 0.195737 7_2:-19777336 Msa1051910:CDS
GCCAGATGCTGAGGAGTTTA+TGG 0.199079 7_2:-19776016 Msa1051910:three_prime_UTR
TGGAACTCTGGCATCCTCTT+TGG 0.199702 7_2:-19777337 Msa1051910:CDS
ATATTTGACTAAACTAATTT+AGG 0.202347 7_2:-19775765 Msa1051910:three_prime_UTR
CTGATCCTACACCATCTTTC+AGG 0.206307 7_2:+19778334 None:intergenic
CAAAGATTTGGAAGGCGTTT+TGG 0.207560 7_2:-19777637 Msa1051910:CDS
CAAAAGACTTAGAAGGTCTT+TGG 0.207843 7_2:-19779462 Msa1051910:CDS
CAGAATCAACTGGTTTCTTT+TGG 0.216135 7_2:+19779126 None:intergenic
CAAAGACCTTCTAAGTCTTT+TGG 0.224135 7_2:+19779463 None:intergenic
GTACAGTTGACTTGATTTAT+TGG 0.233821 7_2:+19775100 None:intergenic
TAAATCTATCACATTGATTT+CGG 0.235348 7_2:-19776145 Msa1051910:three_prime_UTR
TGGTTATTTGTCTAGTTTAA+TGG 0.236365 7_2:+19776207 None:intergenic
TTTGCCGACAGTAAAATTAA+AGG 0.248985 7_2:-19775835 Msa1051910:three_prime_UTR
GCAAATGAGTTGACTGCTTT+AGG 0.250384 7_2:-19775926 Msa1051910:three_prime_UTR
GAACCTGGTGCACATGTTTC+AGG 0.250395 7_2:+19778309 None:intergenic
TGGAACCATTTAATGCAAAA+AGG 0.259020 7_2:-19779344 Msa1051910:CDS
AAATCTATCACATTGATTTC+GGG 0.269846 7_2:-19776144 Msa1051910:three_prime_UTR
TTGATTAGTCCTTGAGTCTA+AGG 0.272269 7_2:-19775731 Msa1051910:three_prime_UTR
AAGCATCAGCATTGCTTTAT+AGG 0.274872 7_2:-19776252 Msa1051910:CDS
GAGTAACCTGATCATCAATT+TGG 0.275180 7_2:+19777032 None:intergenic
CAACCCTGACATCAAACTTC+TGG 0.277887 7_2:+19778562 None:intergenic
GGATTACCAGACACAGAATA+TGG 0.280223 7_2:+19775176 None:intergenic
TGTCCATTGGAGGTGGTTAT+TGG 0.281382 7_2:-19776061 Msa1051910:three_prime_UTR
TTACTAGAACTAGTACTTAT+AGG 0.281808 7_2:+19779302 None:intergenic
TCTGACATCCACCTCTTCTA+AGG 0.283203 7_2:+19777195 None:intergenic
TTTCAAACTTCTAACTGTTT+TGG 0.286942 7_2:+19775329 None:intergenic
GCATTTAGAGTGTTAAAATA+TGG 0.296676 7_2:-19775807 Msa1051910:three_prime_UTR
TTTGTTTCGCACAGGTGAAT+TGG 0.300388 7_2:-19776421 Msa1051910:intron
TGAGATGCATCTTTACACTA+TGG 0.301406 7_2:-19777772 Msa1051910:CDS
GTCAAGGTCATTTATCCTAT+TGG 0.302129 7_2:-19775476 Msa1051910:three_prime_UTR
TCCCCAAAATCCCACTCTTC+TGG 0.308024 7_2:+19778652 None:intergenic
CTGACCTTTCCACCACTATA+AGG 0.308125 7_2:+19777550 None:intergenic
TCTTTCAGGTTCTGAGAGTT+AGG 0.309038 7_2:+19778348 None:intergenic
ATTTACCAGAGAGGATTATT+AGG 0.311775 7_2:+19776184 None:intergenic
CAAATGAGTTGACTGCTTTA+GGG 0.313577 7_2:-19775925 Msa1051910:three_prime_UTR
GAGGGTTTGATGATGTTTCT+TGG 0.320501 7_2:+19778442 None:intergenic
AGGCGTCAATTTGGGCTTCC+TGG 0.323966 7_2:-19777402 Msa1051910:CDS
TCCCCAGTTCCCTGGTTACT+TGG 0.323977 7_2:+19778597 None:intergenic
AATGAGCTGGCATCCGTTAC+TGG 0.329996 7_2:-19779257 Msa1051910:CDS
CGGGTGTGTGTGAATTCATT+AGG 0.336109 7_2:-19776125 Msa1051910:three_prime_UTR
TTGGTGAGTGGGTATTTATT+TGG 0.337262 7_2:-19776042 Msa1051910:three_prime_UTR
ATTGGGACGCAAAGAAGTTT+TGG 0.337492 7_2:+19777218 None:intergenic
TAATGTTTCCAAAATTGAAT+AGG 0.342358 7_2:+19775205 None:intergenic
CAAACCCTACCAGAGGATTC+TGG 0.346319 7_2:-19778732 Msa1051910:CDS
AACATCTGCCCATGTATTCT+GGG 0.347967 7_2:+19778278 None:intergenic
TTCCCTCTTGTCACCATCTC+AGG 0.352082 7_2:+19775865 None:intergenic
AGGGTTTGATGATGTTTCTT+GGG 0.360144 7_2:+19778443 None:intergenic
AACTAGTACTTATAGGCCTT+TGG 0.362814 7_2:+19779309 None:intergenic
CCATGTAGCAGGCGTCAATT+TGG 0.365590 7_2:-19777411 Msa1051910:CDS
TTATAGGAAACTCAATTTGC+TGG 0.368698 7_2:+19775653 None:intergenic
CGTAGGGGATACAATTGCTT+TGG 0.368979 7_2:+19778620 None:intergenic
CATGTAGCAGGCGTCAATTT+GGG 0.371891 7_2:-19777410 Msa1051910:CDS
TGTCAGGGTTGAGACAAAAT+TGG 0.373841 7_2:-19778550 Msa1051910:CDS
CACAAACCAAATTGATGATC+AGG 0.374949 7_2:-19777038 Msa1051910:CDS
GACTGTTGAAGAGCCTTCAT+TGG 0.378312 7_2:-19779498 Msa1051910:CDS
CTTCCACCAAATTCCACTTT+AGG 0.382994 7_2:+19779542 None:intergenic
ACCAGGAGTCTGGAACTTCC+TGG 0.395046 7_2:-19777907 Msa1051910:CDS
TCATTAGGTCCGAACTGGTC+AGG 0.395932 7_2:-19776110 Msa1051910:three_prime_UTR
TTCCTCCCTGGTATTGTGCT+CGG 0.401556 7_2:+19779433 None:intergenic
ACGCCAAGTAACCAGGGAAC+TGG 0.405057 7_2:-19778600 Msa1051910:CDS
TGATACTAAAAGCAAAGATT+TGG 0.405085 7_2:-19777649 Msa1051910:CDS
CCTACTGGATTTGGTGGCTA+TGG 0.407253 7_2:-19775957 Msa1051910:three_prime_UTR
TCCATAAACTCCTCAGCATC+TGG 0.407866 7_2:+19776015 None:intergenic
GTCTTTAAAACAAACCCAAT+TGG 0.411684 7_2:-19775422 Msa1051910:three_prime_UTR
CCAAATTGACGCCTGCTACA+TGG 0.412080 7_2:+19777411 None:intergenic
CCAAAGGGAGTATTGTTTGC+CGG 0.412183 7_2:-19777708 Msa1051910:CDS
CATGTAGTTGCTCATTCCCC+TGG 0.412395 7_2:-19777010 Msa1051910:CDS
CAAATTGACGCCTGCTACAT+GGG 0.416085 7_2:+19777412 None:intergenic
CTAAACTCAGACCAGGAGTC+TGG 0.417958 7_2:-19777917 Msa1051910:CDS
TTGTTTCGCACAGGTGAATT+GGG 0.420371 7_2:-19776420 Msa1051910:intron
CTATACAAAGAGAGAGATAT+AGG 0.420772 7_2:-19778215 Msa1051910:CDS
GGGCTTCTGCTTCATTGTGT+TGG 0.423235 7_2:+19779147 None:intergenic
CCGGCAAACAATACTCCCTT+TGG 0.424123 7_2:+19777708 None:intergenic
TTTGGGGAGGGAATGGTGAA+TGG 0.424798 7_2:+19775572 None:intergenic
GAATTTACCATGGAAGTTGC+TGG 0.427431 7_2:+19778978 None:intergenic
ATGACCTTGACTACAATTTG+TGG 0.429332 7_2:+19775488 None:intergenic
GTAAACTGTCGAGTAATATC+AGG 0.431519 7_2:+19778504 None:intergenic
ATAAGGTTCAGTTTGTTATG+AGG 0.432153 7_2:+19777567 None:intergenic
CCTCTCGACCCCAGAATACA+TGG 0.433922 7_2:-19778287 Msa1051910:CDS
CAAGCTATATGCAACTGAAA+TGG 0.436006 7_2:-19777745 Msa1051910:CDS
ATAAATGCCCTTTGATTGTT+GGG 0.437474 7_2:-19775985 Msa1051910:three_prime_UTR
AAAGTTGGTCAGGGAGGGAG+AGG 0.440336 7_2:-19775545 Msa1051910:three_prime_UTR
GGAGAAAACGACGTGGATCC+CGG 0.440962 7_2:+19778691 None:intergenic
GTAAGACCGGCAGTCATTGC+TGG 0.441214 7_2:+19779035 None:intergenic
AACCCTGACATCAAACTTCT+GGG 0.441396 7_2:+19778563 None:intergenic
TTCCCTGGTTACTTGGCGTA+GGG 0.441784 7_2:+19778604 None:intergenic
CATGTTCCTAAGGATAATAA+TGG 0.444536 7_2:-19775296 Msa1051910:three_prime_UTR
AGCATATGTATTAACATGGC+TGG 0.444598 7_2:+19779179 None:intergenic
AGTTGACTGCTTTAGGGACT+AGG 0.444660 7_2:-19775919 Msa1051910:three_prime_UTR
ATCCACCTCTTCTAAGGATT+GGG 0.444817 7_2:+19777201 None:intergenic
CGCCAAGTAACCAGGGAACT+GGG 0.447609 7_2:-19778599 Msa1051910:CDS
CAATGGGTGAAGGTGGGGAT+TGG 0.450533 7_2:+19777093 None:intergenic
ACTAGAATCTCTTGCTTCTA+CGG 0.454906 7_2:+19775078 None:intergenic
ATGCCCAGAAGTTTGATGTC+AGG 0.455597 7_2:-19778566 Msa1051910:CDS
TCCAGGAAGTTCCAGACTCC+TGG 0.456156 7_2:+19777906 None:intergenic
TATAAATGCCCTTTGATTGT+TGG 0.458116 7_2:-19775986 Msa1051910:three_prime_UTR
TGAAGGCTGAAGCAACCAAT+AGG 0.458621 7_2:+19775461 None:intergenic
CTGGATCTCAGTTGGTAGAA+TGG 0.459170 7_2:-19779364 Msa1051910:CDS
ATGGTCCCATATTCTGTGTC+TGG 0.459191 7_2:-19775182 Msa1051910:three_prime_UTR
TAGACGATTCTGTGAGAGTC+TGG 0.459398 7_2:-19777590 Msa1051910:CDS
GGACTAGGTGAGTGTTATTG+TGG 0.461134 7_2:-19775904 Msa1051910:three_prime_UTR
CATCCACCTCTTCTAAGGAT+TGG 0.462152 7_2:+19777200 None:intergenic
AACATAACAAAGACAACATC+AGG 0.462210 7_2:+19775229 None:intergenic
GGAGCTAGAACGACAAAGTC+AGG 0.462444 7_2:-19775701 Msa1051910:three_prime_UTR
ACTGGATTTGGTGGCTATGG+TGG 0.462939 7_2:-19775954 Msa1051910:three_prime_UTR
GGAGGTGGTTATTGGTGAGT+GGG 0.463793 7_2:-19776053 Msa1051910:three_prime_UTR
CAAATCCTGGCATAAATTGA+AGG 0.465701 7_2:+19775444 None:intergenic
TGGGGATTGGCATCGCCAAC+AGG 0.466272 7_2:+19777106 None:intergenic
ATCAGCATTGCTTTATAGGC+GGG 0.467344 7_2:-19776248 Msa1051910:CDS
AGGAAAATCCCAACAATCAA+AGG 0.469005 7_2:+19775977 None:intergenic
TTTGAAGAAAATACGGTGGC+TGG 0.469590 7_2:-19779383 Msa1051910:CDS
CTGCTTCCAAAAGACTTAGA+AGG 0.470119 7_2:-19779469 Msa1051910:CDS
TGACATTGTCCCCAGTTCCC+TGG 0.470922 7_2:+19778589 None:intergenic
ATCCCCTACGCCAAGTAACC+AGG 0.472931 7_2:-19778607 Msa1051910:CDS
TTAGTCCACATTCCCATATG+AGG 0.473424 7_2:+19777936 None:intergenic
TGAGTGGGTATTTATTTGGC+TGG 0.475033 7_2:-19776038 Msa1051910:three_prime_UTR
GGTTGTGCAATTGATTGAAT+AGG 0.475238 7_2:+19778525 None:intergenic
TGTTCAGCTGTCTGCCACAA+TGG 0.475368 7_2:+19777076 None:intergenic
GAGACCTGACTCTGGAACTC+TGG 0.476215 7_2:-19777349 Msa1051910:CDS
CATTATTATCCTTAGGAACA+TGG 0.476330 7_2:+19775297 None:intergenic
CTCAGCTCTATCTGACGTAA+AGG 0.478165 7_2:+19778386 None:intergenic
GGAAAATTTGTTGTCCATCC+TGG 0.478518 7_2:-19776386 Msa1051910:CDS
TAGGAAGCTGTGCCTTGTAT+TGG 0.479096 7_2:-19778160 Msa1051910:CDS
CTGTGTCTGGTAATCCTAGC+TGG 0.482304 7_2:-19775169 Msa1051910:three_prime_UTR
TCTGGAGGGTGCTACTTCCA+TGG 0.485241 7_2:+19778670 None:intergenic
TTCAGAACAGAGGAAAATCT+TGG 0.488526 7_2:-19777161 Msa1051910:CDS
TAACAAACTGAACCTTATAG+TGG 0.488930 7_2:-19777562 Msa1051910:CDS
TGAATTCATTAGGTCCGAAC+TGG 0.495295 7_2:-19776115 Msa1051910:three_prime_UTR
GTACTTGTAGCAGAATCAAC+TGG 0.495951 7_2:+19779116 None:intergenic
ATTCAATAAAGAAGTGGGTA+AGG 0.496622 7_2:+19779217 None:intergenic
GAGAAAACGACGTGGATCCC+GGG 0.496643 7_2:+19778692 None:intergenic
TCATTCCCCTGGGACTGATA+AGG 0.499448 7_2:-19776999 Msa1051910:intron
CTCATTTCCATTACTTGTCA+CGG 0.499601 7_2:+19779274 None:intergenic
GACTAGGTGAGTGTTATTGT+GGG 0.499892 7_2:-19775903 Msa1051910:three_prime_UTR
CACGACGAGAGACCTGACTC+TGG 0.500184 7_2:-19777357 Msa1051910:CDS
TTCAGCCTTCAATTTATGCC+AGG 0.500316 7_2:-19775449 Msa1051910:three_prime_UTR
TCTGCCACAATGGGTGAAGG+TGG 0.500486 7_2:+19777086 None:intergenic
GAACTCTGGCATCCTCTTTG+GGG 0.501377 7_2:-19777335 Msa1051910:CDS
TCAGCTCTATCTGACGTAAA+GGG 0.501699 7_2:+19778387 None:intergenic
CAGTATACCTTATCAGTCCC+AGG 0.503666 7_2:+19776992 None:intergenic
GAGATGCATCTTTACACTAT+GGG 0.505395 7_2:-19777771 Msa1051910:CDS
CTGGATTTGGTGGCTATGGT+GGG 0.506693 7_2:-19775953 Msa1051910:three_prime_UTR
TGGTTGGTTTGAAGAAAATA+CGG 0.507011 7_2:-19779390 Msa1051910:CDS
TATAGGAAACTCAATTTGCT+GGG 0.508532 7_2:+19775654 None:intergenic
AACCACCTAATAATCCTCTC+TGG 0.509577 7_2:-19776189 Msa1051910:three_prime_UTR
ATCTCTCCATTATTATCCTT+AGG 0.510090 7_2:+19775290 None:intergenic
TAGCAGAATTAAGAAGTGTA+TGG 0.511158 7_2:+19778130 None:intergenic
AAAATTCCGAGCACAATACC+AGG 0.511553 7_2:-19779439 Msa1051910:CDS
CTTTCCAGAATCCTCTGGTA+GGG 0.511714 7_2:+19778728 None:intergenic
TCCTTGAGTCTAAGGAGGTG+AGG 0.511866 7_2:-19775723 Msa1051910:three_prime_UTR
TGGCAGACAGCTGAACAGTT+TGG 0.512364 7_2:-19777070 Msa1051910:CDS
CTGCATGACAGATGCCAGCT+AGG 0.512662 7_2:+19775155 None:intergenic
TGCCCAGAAGTTTGATGTCA+GGG 0.513211 7_2:-19778565 Msa1051910:CDS
AATTTGACCGTGACAAGTAA+TGG 0.513837 7_2:-19779281 Msa1051910:CDS
GATGCCAGAGTTCCAGAGTC+AGG 0.513937 7_2:+19777345 None:intergenic
GTTGTCGTATAGTATTTAGT+AGG 0.514560 7_2:-19777135 Msa1051910:CDS
TGGAGGTGGTTATTGGTGAG+TGG 0.515154 7_2:-19776054 Msa1051910:three_prime_UTR
CGAATCTTTCCAGAATCCTC+TGG 0.516040 7_2:+19778723 None:intergenic
TTATCCAGTGTTTGTTATCA+CGG 0.516303 7_2:+19775032 None:intergenic
TTAGACTCAAGGACTAATCA+AGG 0.518969 7_2:+19775733 None:intergenic
ACCTCTAGAAATAACTCTAC+CGG 0.519260 7_2:+19777689 None:intergenic
AACAGAACTTTGTGTAAGAC+CGG 0.519306 7_2:+19779022 None:intergenic
GGCAAAGGTGCTTGATCCAA+AGG 0.519871 7_2:-19777724 Msa1051910:CDS
TACACTTCTTAATTCTGCTA+AGG 0.520760 7_2:-19778127 Msa1051910:intron
CTTAACATCTCATCATGCAC+AGG 0.523664 7_2:+19778011 None:intergenic
AATAACCACCTCCAATGGAC+AGG 0.524523 7_2:+19776063 None:intergenic
CCTTGAGTCTAAGGAGGTGA+GGG 0.524661 7_2:-19775722 Msa1051910:three_prime_UTR
GATTACCAGACACAGAATAT+GGG 0.527584 7_2:+19775177 None:intergenic
GAAGTTGCTGGTGATGAAGC+TGG 0.530070 7_2:+19778990 None:intergenic
AAACAGTATCCATGTTCCTA+AGG 0.530513 7_2:-19775306 Msa1051910:three_prime_UTR
GTCAGATAGAGCTGAGCAGA+AGG 0.533761 7_2:-19778379 Msa1051910:CDS
GTTCAGCTGTCTGCCACAAT+GGG 0.534661 7_2:+19777077 None:intergenic
ATGTAGTTGCTCATTCCCCT+GGG 0.534967 7_2:-19777009 Msa1051910:CDS
GTTCCCTGGTTACTTGGCGT+AGG 0.540638 7_2:+19778603 None:intergenic
AAATTTATATTACCTTCTCC+AGG 0.541581 7_2:+19777889 None:intergenic
CTATGGCTGGGAAAGGTGGT+TGG 0.544993 7_2:-19779406 Msa1051910:CDS
GACAAGTAATGGAAATGAGC+TGG 0.545616 7_2:-19779270 Msa1051910:CDS
AACAAACTCAAATTCAGCGA+GGG 0.546722 7_2:-19779084 Msa1051910:CDS
AATTTGTTGTCCATCCTGGC+TGG 0.550027 7_2:-19776382 Msa1051910:intron
ATGCCTAAAGTGGAATTTGG+TGG 0.552498 7_2:-19779545 Msa1051910:CDS
GAAAGATTCGCATGAAACCC+CGG 0.552904 7_2:-19778710 Msa1051910:CDS
CATTAGGTCCGAACTGGTCA+GGG 0.553214 7_2:-19776109 Msa1051910:three_prime_UTR
GCCGGTAGAGTTATTTCTAG+AGG 0.553590 7_2:-19777690 Msa1051910:CDS
TGCCACAATGGGTGAAGGTG+GGG 0.554004 7_2:+19777088 None:intergenic
AATATTATTCAATAAAGAAG+TGG 0.554223 7_2:+19779211 None:intergenic
GGTCTTACACAAAGTTCTGT+TGG 0.555434 7_2:-19779020 Msa1051910:CDS
GGAAAATCCCAACAATCAAA+GGG 0.555604 7_2:+19775978 None:intergenic
TCACCAATAACCACCTCCAA+TGG 0.555672 7_2:+19776058 None:intergenic
ATCTCAAGAAGAGAAGGGCC+AGG 0.557166 7_2:+19777384 None:intergenic
TGATCAATCTCAAGAAGAGA+AGG 0.561875 7_2:+19777378 None:intergenic
CTGCCACAATGGGTGAAGGT+GGG 0.561980 7_2:+19777087 None:intergenic
AAAATAAAGTTGGTCAGGGA+GGG 0.562373 7_2:-19775550 Msa1051910:three_prime_UTR
TACGGTGGCTGGATCTCAGT+TGG 0.563132 7_2:-19779372 Msa1051910:CDS
CCAAAATCCCACTCTTCTGG+AGG 0.563228 7_2:+19778655 None:intergenic
ATTTGGCTGGCCAGATGCTG+AGG 0.563801 7_2:-19776025 Msa1051910:three_prime_UTR
GCAAAGGTGCTTGATCCAAA+GGG 0.564642 7_2:-19777723 Msa1051910:CDS
CCCTCACCTCCTTAGACTCA+AGG 0.565158 7_2:+19775722 None:intergenic
TATGGTCAAGGTCCAATACA+AGG 0.568535 7_2:+19778148 None:intergenic
ACACATACTTCCCATGTAGC+AGG 0.573551 7_2:-19777422 Msa1051910:CDS
AACTCTCAGAACCTGAAAGA+TGG 0.574951 7_2:-19778345 Msa1051910:CDS
GCTCCTGAAACATGTGCACC+AGG 0.575554 7_2:-19778312 Msa1051910:CDS
GGGTTTGATGATGTTTCTTG+GGG 0.575741 7_2:+19778444 None:intergenic
GTGAATTGGGCTATTGCCAA+TGG 0.579435 7_2:-19776407 Msa1051910:CDS
CATCAGCATTGCTTTATAGG+CGG 0.580713 7_2:-19776249 Msa1051910:CDS
TCTTTCCAGAATCCTCTGGT+AGG 0.581243 7_2:+19778727 None:intergenic
ATATTATTCAATAAAGAAGT+GGG 0.581249 7_2:+19779212 None:intergenic
TGTGGCGCTGCTACCAGTAA+CGG 0.581746 7_2:+19779244 None:intergenic
CTAACCACAAATTGTAGTCA+AGG 0.582118 7_2:-19775492 Msa1051910:three_prime_UTR
GATAGAGCTGAGCAGAAGGA+TGG 0.582805 7_2:-19778375 Msa1051910:CDS
CAGAACCTGAAAGATGGTGT+AGG 0.585217 7_2:-19778339 Msa1051910:CDS
GAACAGAGGAAAATCTTGGA+TGG 0.585563 7_2:-19777157 Msa1051910:CDS
TTCTGGGGTCGAGAGGAACC+TGG 0.588208 7_2:+19778294 None:intergenic
TGAACCTTATAGTGGTGGAA+AGG 0.589395 7_2:-19777554 Msa1051910:intron
ACTGGTCCAGCAATGACTGC+CGG 0.589451 7_2:-19779041 Msa1051910:CDS
AAAGATTCGCATGAAACCCC+GGG 0.589601 7_2:-19778709 Msa1051910:CDS
AAAGCTATGGCTGGGAAAGG+TGG 0.591002 7_2:-19779410 Msa1051910:CDS
TGCGTCCCAATCCTTAGAAG+AGG 0.591428 7_2:-19777206 Msa1051910:CDS
AAGGTACTCACCAGCCAGGA+TGG 0.591916 7_2:+19776372 None:intergenic
AGTAGCACCCTCCAGAAGAG+TGG 0.591979 7_2:-19778663 Msa1051910:CDS
ATCCCCACCTTCACCCATTG+TGG 0.593978 7_2:-19777090 Msa1051910:CDS
AACTCTGGCATCCTCTTTGG+GGG 0.596091 7_2:-19777334 Msa1051910:intron
TTCATCACCAGCAACTTCCA+TGG 0.596979 7_2:-19778985 Msa1051910:intron
TACCAGAGAGGATTATTAGG+TGG 0.597405 7_2:+19776187 None:intergenic
CAGTTGCAATGTCTGTCGTA+TGG 0.597685 7_2:-19775135 Msa1051910:three_prime_UTR
GAAGCAGTAACATCCAATGA+AGG 0.599470 7_2:+19779485 None:intergenic
ACTAAAAGCAAAGATTTGGA+AGG 0.600366 7_2:-19777645 Msa1051910:CDS
TTTAGTAGGATGTTTCCTGT+TGG 0.602454 7_2:-19777121 Msa1051910:CDS
AATACCGTGATAACAAACAC+TGG 0.603330 7_2:-19775036 Msa1051910:three_prime_UTR
CTGTCTGCCACAATGGGTGA+AGG 0.604358 7_2:+19777083 None:intergenic
CAAAATCCCACTCTTCTGGA+GGG 0.605994 7_2:+19778656 None:intergenic
GTAGCACCCTCCAGAAGAGT+GGG 0.606987 7_2:-19778662 Msa1051910:CDS
AATTAAGAAGTGTATGGTCA+AGG 0.607730 7_2:+19778136 None:intergenic
TTATAAGGTACTCACCAGCC+AGG 0.612985 7_2:+19776368 None:intergenic
AGTCTGGAACTTCCTGGAGA+AGG 0.613301 7_2:-19777901 Msa1051910:intron
TCCCTGGTTACTTGGCGTAG+GGG 0.615105 7_2:+19778605 None:intergenic
ATTAGTCCTTGAGTCTAAGG+AGG 0.615639 7_2:-19775728 Msa1051910:three_prime_UTR
AGTATACCTTATCAGTCCCA+GGG 0.615640 7_2:+19776993 None:intergenic
ATAACCACCTCCAATGGACA+GGG 0.616698 7_2:+19776064 None:intergenic
CAAACTGAACCTTATAGTGG+TGG 0.616711 7_2:-19777559 Msa1051910:CDS
CCATGTATTCTGGGGTCGAG+AGG 0.616837 7_2:+19778287 None:intergenic
AAGGGGAAACTGAACTCCAA+AGG 0.618234 7_2:-19779325 Msa1051910:CDS
GTCCCAATCCTTAGAAGAGG+TGG 0.619975 7_2:-19777203 Msa1051910:CDS
TGACTTATGTGAACCTGAGA+TGG 0.620185 7_2:-19775878 Msa1051910:three_prime_UTR
ATATGCAACTGAAATGGCAA+AGG 0.622455 7_2:-19777739 Msa1051910:CDS
ACAAACTCAAATTCAGCGAG+GGG 0.634305 7_2:-19779083 Msa1051910:CDS
ATATCCTAGCTTCAGAACAG+AGG 0.636349 7_2:-19777171 Msa1051910:CDS
CTCTCGACCCCAGAATACAT+GGG 0.636376 7_2:-19778286 Msa1051910:CDS
TCACATCATAAGCTTCAAAG+AGG 0.638942 7_2:+19778250 None:intergenic
GATCAATCTCAAGAAGAGAA+GGG 0.640391 7_2:+19777379 None:intergenic
CCATAGCCACCAAATCCAGT+AGG 0.641404 7_2:+19775957 None:intergenic
AGAAGTGGGTAAGGAAGCTG+TGG 0.642786 7_2:+19779226 None:intergenic
ACATCTGCCCATGTATTCTG+GGG 0.643846 7_2:+19778279 None:intergenic
ACAGATGCAACTGTGAACAC+TGG 0.655371 7_2:-19779059 Msa1051910:CDS
ATGTGGACTAAACTCAGACC+AGG 0.656065 7_2:-19777924 Msa1051910:CDS
AGAAAACGACGTGGATCCCG+GGG 0.659194 7_2:+19778693 None:intergenic
TCCCCTACGCCAAGTAACCA+GGG 0.659295 7_2:-19778606 Msa1051910:CDS
GCCAAGTAACCAGGGAACTG+GGG 0.663449 7_2:-19778598 Msa1051910:CDS
AACCACCTCCAATGGACAGG+GGG 0.665394 7_2:+19776066 None:intergenic
TAACAAACTCAAATTCAGCG+AGG 0.666852 7_2:-19779085 Msa1051910:CDS
AACCTGAGATGGTGACAAGA+GGG 0.669019 7_2:-19775867 Msa1051910:three_prime_UTR
TAAAAGCATATGTATTAACA+TGG 0.674728 7_2:+19779175 None:intergenic
AGATGCTGAGGAGTTTATGG+AGG 0.685891 7_2:-19776013 Msa1051910:three_prime_UTR
TACAAAGAGAGAGATATAGG+AGG 0.685934 7_2:-19778212 Msa1051910:CDS
ACTAGGTGAGTGTTATTGTG+GGG 0.693202 7_2:-19775902 Msa1051910:three_prime_UTR
GAACCTGAGATGGTGACAAG+AGG 0.703058 7_2:-19775868 Msa1051910:three_prime_UTR
AAATTCCGAGCACAATACCA+GGG 0.707038 7_2:-19779438 Msa1051910:CDS
TCAGACACAAACCCTACCAG+AGG 0.710242 7_2:-19778739 Msa1051910:intron
TAACCACCTCCAATGGACAG+GGG 0.723442 7_2:+19776065 None:intergenic
CTTCCATGGAGAAAACGACG+TGG 0.732848 7_2:+19778684 None:intergenic
TTCCGAGCACAATACCAGGG+AGG 0.743070 7_2:-19779435 Msa1051910:CDS
GTATACCTTATCAGTCCCAG+GGG 0.752263 7_2:+19776994 None:intergenic
TTGGTTTGAAGAAAATACGG+TGG 0.767948 7_2:-19779387 Msa1051910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAATATAATATAACTTATA+AGG + chr7_2:19778204-19778223 None:intergenic 10.0%
!! ATATTATTCAATAAAGAAGT+GGG + chr7_2:19775345-19775364 None:intergenic 15.0%
!! AATATTATTCAATAAAGAAG+TGG + chr7_2:19775346-19775365 None:intergenic 15.0%
!! AAAAGATATAATCTCATAAA+AGG + chr7_2:19775601-19775620 None:intergenic 15.0%
!!! TATTCAATTTTTCTTTGATA+TGG - chr7_2:19777250-19777269 Msa1051910:intron 15.0%
!!! ATTCAATTTTTCTTTGATAT+GGG - chr7_2:19777251-19777270 Msa1051910:intron 15.0%
!!! TGAGTTAATTGATTTTTTAT+TGG + chr7_2:19777964-19777983 None:intergenic 15.0%
!! ATATTTGACTAAACTAATTT+AGG - chr7_2:19778789-19778808 Msa1051910:intron 15.0%
!! TGTTATACAAATTCAATTAT+AGG + chr7_2:19778920-19778939 None:intergenic 15.0%
!!! ATTTTGAGAATTTGTAAAAA+CGG - chr7_2:19779158-19779177 Msa1051910:CDS 15.0%
!!! TAAAAGCATATGTATTAACA+TGG + chr7_2:19775382-19775401 None:intergenic 20.0%
!! GAAGAAAATAATGAATGATT+GGG + chr7_2:19775681-19775700 None:intergenic 20.0%
!!! ATTAAGTTTTAAGATATTGC+AGG - chr7_2:19777108-19777127 Msa1051910:CDS 20.0%
!!! ACATATTTTATTCTGTTTGA+TGG - chr7_2:19777631-19777650 Msa1051910:CDS 20.0%
!! ATATTAGCAAATGGTAAATA+GGG + chr7_2:19777897-19777916 None:intergenic 20.0%
!!! TGAAGATTTTACTATATGTT+TGG + chr7_2:19778049-19778068 None:intergenic 20.0%
!! TCAAATTAAAAAGACAGAAA+AGG + chr7_2:19778235-19778254 None:intergenic 20.0%
!!! TAAATCTATCACATTGATTT+CGG - chr7_2:19778409-19778428 Msa1051910:CDS 20.0%
!!! ATTCTCAAAATTTTCCAATT+GGG + chr7_2:19779149-19779168 None:intergenic 20.0%
!!! AATTCTCAAAATTTTCCAAT+TGG + chr7_2:19779150-19779169 None:intergenic 20.0%
!! TAATGTTTCCAAAATTGAAT+AGG + chr7_2:19779352-19779371 None:intergenic 20.0%
!!! TTCAATTTTGGAAACATTAA+TGG - chr7_2:19779353-19779372 Msa1051910:CDS 20.0%
! TTACTAGAACTAGTACTTAT+AGG + chr7_2:19775255-19775274 None:intergenic 25.0%
! TAATTCTTGATATTCTCTAG+TGG - chr7_2:19775640-19775659 Msa1051910:three_prime_UTR 25.0%
! CGAAGAAAATAATGAATGAT+TGG + chr7_2:19775682-19775701 None:intergenic 25.0%
! AAATTTATATTACCTTCTCC+AGG + chr7_2:19776668-19776687 None:intergenic 25.0%
! TGATACTAAAAGCAAAGATT+TGG - chr7_2:19776905-19776924 Msa1051910:intron 25.0%
! GAATAAAATATGTGCAAATG+AGG + chr7_2:19777624-19777643 None:intergenic 25.0%
!! ACGTATTTTATTCTGTTTGA+TGG - chr7_2:19777683-19777702 Msa1051910:CDS 25.0%
! AATGAATTTCTTCAAGCATT+GGG + chr7_2:19777796-19777815 None:intergenic 25.0%
! CATATTAGCAAATGGTAAAT+AGG + chr7_2:19777898-19777917 None:intergenic 25.0%
!! CTATTTACCATTTGCTAATA+TGG - chr7_2:19777896-19777915 Msa1051910:intron 25.0%
!! TGGTTATTTGTCTAGTTTAA+TGG + chr7_2:19778350-19778369 None:intergenic 25.0%
!!! AAATCTATCACATTGATTTC+GGG - chr7_2:19778410-19778429 Msa1051910:CDS 25.0%
!! GCATTTAGAGTGTTAAAATA+TGG - chr7_2:19778747-19778766 Msa1051910:intron 25.0%
!!! TTTGTTTTAAAGACAAATCC+TGG + chr7_2:19779126-19779145 None:intergenic 25.0%
!! TTTCAAACTTCTAACTGTTT+TGG + chr7_2:19779228-19779247 None:intergenic 25.0%
!! TTATGTTGCCTATTCAATTT+TGG - chr7_2:19779341-19779360 Msa1051910:CDS 25.0%
AATATGCCTAAAGTGGAATT+TGG - chr7_2:19775006-19775025 Msa1051910:three_prime_UTR 30.0%
!! TGGTTGGTTTGAAGAAAATA+CGG - chr7_2:19775164-19775183 Msa1051910:three_prime_UTR 30.0%
TGGAACCATTTAATGCAAAA+AGG - chr7_2:19775210-19775229 Msa1051910:three_prime_UTR 30.0%
GGAACCATTTAATGCAAAAA+GGG - chr7_2:19775211-19775230 Msa1051910:three_prime_UTR 30.0%
GAACCATTTAATGCAAAAAG+GGG - chr7_2:19775212-19775231 Msa1051910:three_prime_UTR 30.0%
! TTTCCCCTTTTTGCATTAAA+TGG + chr7_2:19775218-19775237 None:intergenic 30.0%
ATTCAATAAAGAAGTGGGTA+AGG + chr7_2:19775340-19775359 None:intergenic 30.0%
!! AGAATCAACTGGTTTCTTTT+GGG + chr7_2:19775430-19775449 None:intergenic 30.0%
CTCATAAAAGGAATTTACCA+TGG + chr7_2:19775589-19775608 None:intergenic 30.0%
! TTTTCTTCGACTTAAATCTG+AGG - chr7_2:19775693-19775712 Msa1051910:three_prime_UTR 30.0%
AAACAACAGTAAGCCTTAAA+GGG + chr7_2:19775772-19775791 None:intergenic 30.0%
TAAACAACAGTAAGCCTTAA+AGG + chr7_2:19775773-19775792 None:intergenic 30.0%
!! AGCAATGTTTTTCAGATTCT+TGG + chr7_2:19776075-19776094 None:intergenic 30.0%
CTATACAAAGAGAGAGATAT+AGG - chr7_2:19776339-19776358 Msa1051910:intron 30.0%
! AGAAAAAAATGTTTGCTGCT+AGG - chr7_2:19776375-19776394 Msa1051910:intron 30.0%
! AATTAAGAAGTGTATGGTCA+AGG + chr7_2:19776421-19776440 None:intergenic 30.0%
! TAGCAGAATTAAGAAGTGTA+TGG + chr7_2:19776427-19776446 None:intergenic 30.0%
TACACTTCTTAATTCTGCTA+AGG - chr7_2:19776427-19776446 Msa1051910:intron 30.0%
TAAGGTAATCTGCATAGAAT+GGG - chr7_2:19776445-19776464 Msa1051910:intron 30.0%
TTGTCCAAACTTTAATCCAT+GGG + chr7_2:19776482-19776501 None:intergenic 30.0%
ATTGTCCAAACTTTAATCCA+TGG + chr7_2:19776483-19776502 None:intergenic 30.0%
!! TCTTTTTCGTTTTCCTCATA+TGG - chr7_2:19776605-19776624 Msa1051910:intron 30.0%
!! CTTTTTCGTTTTCCTCATAT+GGG - chr7_2:19776606-19776625 Msa1051910:intron 30.0%
CTTTGATACAAAATTAAGCC+TGG + chr7_2:19776719-19776738 None:intergenic 30.0%
! ATCTTTTCCTAATGCTTTAC+AGG - chr7_2:19776746-19776765 Msa1051910:intron 30.0%
ACTAAAAGCAAAGATTTGGA+AGG - chr7_2:19776909-19776928 Msa1051910:intron 30.0%
!! ATAAGGTTCAGTTTGTTATG+AGG + chr7_2:19776990-19777009 None:intergenic 30.0%
TAACAAACTGAACCTTATAG+TGG - chr7_2:19776992-19777011 Msa1051910:intron 30.0%
! TTGATAATTCCTTCTCTTCT+CGG - chr7_2:19777291-19777310 Msa1051910:intron 30.0%
GTTGTCGTATAGTATTTAGT+AGG - chr7_2:19777419-19777438 Msa1051910:CDS 30.0%
TTGAAACTTTCACCTTGTTA+TGG - chr7_2:19777590-19777609 Msa1051910:CDS 30.0%
TAAAATATGTGCAAATGAGG+AGG + chr7_2:19777621-19777640 None:intergenic 30.0%
CATAAAAGATTAGCACTTGA+TGG - chr7_2:19777753-19777772 Msa1051910:CDS 30.0%
CAATGAATTTCTTCAAGCAT+TGG + chr7_2:19777797-19777816 None:intergenic 30.0%
! ATTTTCATCTAACCAAAACG+TGG - chr7_2:19777841-19777860 Msa1051910:intron 30.0%
TAAGTTGCCATATTAGCAAA+TGG + chr7_2:19777906-19777925 None:intergenic 30.0%
AAAATTGGGGAGAAAAACAT+AGG + chr7_2:19778016-19778035 None:intergenic 30.0%
!!! TTTCTCCCCAATTTTTTCAT+TGG - chr7_2:19778021-19778040 Msa1051910:CDS 30.0%
!!! TTCTCCCCAATTTTTTCATT+GGG - chr7_2:19778022-19778041 Msa1051910:CDS 30.0%
ATCTTCATTACTGTGATAGA+TGG - chr7_2:19778062-19778081 Msa1051910:intron 30.0%
TCTTCATTACTGTGATAGAT+GGG - chr7_2:19778063-19778082 Msa1051910:intron 30.0%
! ATGGACAACAAATTTTCCAT+TGG + chr7_2:19778166-19778185 None:intergenic 30.0%
ATTTACCAGAGAGGATTATT+AGG + chr7_2:19778373-19778392 None:intergenic 30.0%
!!! CGTATTTTAATTTACCAGAG+AGG + chr7_2:19778382-19778401 None:intergenic 30.0%
TATAAATGCCCTTTGATTGT+TGG - chr7_2:19778568-19778587 Msa1051910:CDS 30.0%
ATAAATGCCCTTTGATTGTT+GGG - chr7_2:19778569-19778588 Msa1051910:CDS 30.0%
TTTGCCGACAGTAAAATTAA+AGG - chr7_2:19778719-19778738 Msa1051910:CDS 30.0%
! TTTTAACACTCTAAATGCAG+AGG + chr7_2:19778745-19778764 None:intergenic 30.0%
! TATAGGAAACTCAATTTGCT+GGG + chr7_2:19778903-19778922 None:intergenic 30.0%
TTATAGGAAACTCAATTTGC+TGG + chr7_2:19778904-19778923 None:intergenic 30.0%
!!! CTGACCAACTTTATTTTTTG+GGG + chr7_2:19779001-19779020 None:intergenic 30.0%
!!! CCTGACCAACTTTATTTTTT+GGG + chr7_2:19779002-19779021 None:intergenic 30.0%
! CCAAAAAATAAAGTTGGTCA+GGG - chr7_2:19779000-19779019 Msa1051910:CDS 30.0%
!! GTCTTTAAAACAAACCCAAT+TGG - chr7_2:19779132-19779151 Msa1051910:CDS 30.0%
CATTATTATCCTTAGGAACA+TGG + chr7_2:19779260-19779279 None:intergenic 30.0%
CATGTTCCTAAGGATAATAA+TGG - chr7_2:19779258-19779277 Msa1051910:CDS 30.0%
ATCTCTCCATTATTATCCTT+AGG + chr7_2:19779267-19779286 None:intergenic 30.0%
! ACCTTTGTGTAGTTCTTTTT+CGG + chr7_2:19779302-19779321 None:intergenic 30.0%
AACATAACAAAGACAACATC+AGG + chr7_2:19779328-19779347 None:intergenic 30.0%
!! GTACAGTTGACTTGATTTAT+TGG + chr7_2:19779457-19779476 None:intergenic 30.0%
!! TTATCCAGTGTTTGTTATCA+CGG + chr7_2:19779525-19779544 None:intergenic 30.0%
! CAAAGACCTTCTAAGTCTTT+TGG + chr7_2:19775094-19775113 None:intergenic 35.0%
CAAAAGACTTAGAAGGTCTT+TGG - chr7_2:19775092-19775111 Msa1051910:three_prime_UTR 35.0%
! TTGGTTTGAAGAAAATACGG+TGG - chr7_2:19775167-19775186 Msa1051910:three_prime_UTR 35.0%
AACTAGTACTTATAGGCCTT+TGG + chr7_2:19775248-19775267 None:intergenic 35.0%
AATTTGACCGTGACAAGTAA+TGG - chr7_2:19775273-19775292 Msa1051910:three_prime_UTR 35.0%
CTCATTTCCATTACTTGTCA+CGG + chr7_2:19775283-19775302 None:intergenic 35.0%
AGCATATGTATTAACATGGC+TGG + chr7_2:19775378-19775397 None:intergenic 35.0%
!! CAGAATCAACTGGTTTCTTT+TGG + chr7_2:19775431-19775450 None:intergenic 35.0%
TAACAAACTCAAATTCAGCG+AGG - chr7_2:19775469-19775488 Msa1051910:three_prime_UTR 35.0%
AACAAACTCAAATTCAGCGA+GGG - chr7_2:19775470-19775489 Msa1051910:three_prime_UTR 35.0%
AACAGAACTTTGTGTAAGAC+CGG + chr7_2:19775535-19775554 None:intergenic 35.0%
TCCGTCGTTATGATTTATCA+CGG - chr7_2:19775743-19775762 Msa1051910:three_prime_UTR 35.0%
TCCGTGATAAATCATAACGA+CGG + chr7_2:19775747-19775766 None:intergenic 35.0%
TTTATCACGGAATCCCTTTA+AGG - chr7_2:19775756-19775775 Msa1051910:three_prime_UTR 35.0%
GGTTGTGCAATTGATTGAAT+AGG + chr7_2:19776032-19776051 None:intergenic 35.0%
GTAAACTGTCGAGTAATATC+AGG + chr7_2:19776053-19776072 None:intergenic 35.0%
!! AGGGTTTGATGATGTTTCTT+GGG + chr7_2:19776114-19776133 None:intergenic 35.0%
!! AAACATTTTGAGTAGCAGGA+GGG + chr7_2:19776133-19776152 None:intergenic 35.0%
!! GAAGAAACATTTTGAGTAGC+AGG + chr7_2:19776137-19776156 None:intergenic 35.0%
TCACATCATAAGCTTCAAAG+AGG + chr7_2:19776307-19776326 None:intergenic 35.0%
TACAAAGAGAGAGATATAGG+AGG - chr7_2:19776342-19776361 Msa1051910:intron 35.0%
CTAAGGTAATCTGCATAGAA+TGG - chr7_2:19776444-19776463 Msa1051910:intron 35.0%
AAACGAAAAAGATGTCTCTG+AGG + chr7_2:19776597-19776616 None:intergenic 35.0%
GTTAGGTATGATATTGTTCC+AGG - chr7_2:19776698-19776717 Msa1051910:intron 35.0%
! TTACTAGCCTGTAAAGCATT+AGG + chr7_2:19776756-19776775 None:intergenic 35.0%
TGAGATGCATCTTTACACTA+TGG - chr7_2:19776782-19776801 Msa1051910:intron 35.0%
GAGATGCATCTTTACACTAT+GGG - chr7_2:19776783-19776802 Msa1051910:intron 35.0%
CAAGCTATATGCAACTGAAA+TGG - chr7_2:19776809-19776828 Msa1051910:intron 35.0%
ATATGCAACTGAAATGGCAA+AGG - chr7_2:19776815-19776834 Msa1051910:intron 35.0%
! ACCTCTAGAAATAACTCTAC+CGG + chr7_2:19776868-19776887 None:intergenic 35.0%
!!! AAAGATTTGGAAGGCGTTTT+GGG - chr7_2:19776918-19776937 Msa1051910:intron 35.0%
GATCAATCTCAAGAAGAGAA+GGG + chr7_2:19777178-19777197 None:intergenic 35.0%
TGATCAATCTCAAGAAGAGA+AGG + chr7_2:19777179-19777198 None:intergenic 35.0%
AATATAACTTACCCCCAAAG+AGG + chr7_2:19777234-19777253 None:intergenic 35.0%
TTCAGAACAGAGGAAAATCT+TGG - chr7_2:19777393-19777412 Msa1051910:CDS 35.0%
TTTAGTAGGATGTTTCCTGT+TGG - chr7_2:19777433-19777452 Msa1051910:intron 35.0%
! CACAAACCAAATTGATGATC+AGG - chr7_2:19777516-19777535 Msa1051910:intron 35.0%
GAGTAACCTGATCATCAATT+TGG + chr7_2:19777525-19777544 None:intergenic 35.0%
GAATAAAATACGTGCACATC+AGG + chr7_2:19777676-19777695 None:intergenic 35.0%
TAACCAAAACGTGGATATCA+AGG - chr7_2:19777850-19777869 Msa1051910:intron 35.0%
!!! TCTCCCCAATTTTTTCATTG+GGG - chr7_2:19778023-19778042 Msa1051910:CDS 35.0%
TTGGCCCCAATGAAAAAATT+GGG + chr7_2:19778030-19778049 None:intergenic 35.0%
TTTGGCCCCAATGAAAAAAT+TGG + chr7_2:19778031-19778050 None:intergenic 35.0%
AAGCATCAGCATTGCTTTAT+AGG - chr7_2:19778302-19778321 Msa1051910:CDS 35.0%
TTGGTGAGTGGGTATTTATT+TGG - chr7_2:19778512-19778531 Msa1051910:CDS 35.0%
GGAAAATCCCAACAATCAAA+GGG + chr7_2:19778579-19778598 None:intergenic 35.0%
AGGAAAATCCCAACAATCAA+AGG + chr7_2:19778580-19778599 None:intergenic 35.0%
! CAAATGAGTTGACTGCTTTA+GGG - chr7_2:19778629-19778648 Msa1051910:CDS 35.0%
!! GAGGCCTTTAATTTTACTGT+CGG + chr7_2:19778726-19778745 None:intergenic 35.0%
TTAGACTCAAGGACTAATCA+AGG + chr7_2:19778824-19778843 None:intergenic 35.0%
! TTGATTAGTCCTTGAGTCTA+AGG - chr7_2:19778823-19778842 Msa1051910:intron 35.0%
!!! CGACAAAGTCAGGATTTTTT+TGG - chr7_2:19778863-19778882 Msa1051910:intron 35.0%
!!! CAAAGTCAGGATTTTTTTGG+AGG - chr7_2:19778866-19778885 Msa1051910:intron 35.0%
!!! TTTTTTTGGAGGTGGATAGT+TGG - chr7_2:19778877-19778896 Msa1051910:intron 35.0%
!! TGTGACTGCTAAAGCATTTT+AGG - chr7_2:19778943-19778962 Msa1051910:intron 35.0%
!! GTGACTGCTAAAGCATTTTA+GGG - chr7_2:19778944-19778963 Msa1051910:intron 35.0%
!! TGACTGCTAAAGCATTTTAG+GGG - chr7_2:19778945-19778964 Msa1051910:intron 35.0%
!!! TTTATTTTTTGGGGAGGGAA+TGG + chr7_2:19778992-19779011 None:intergenic 35.0%
!!! CCAACTTTATTTTTTGGGGA+GGG + chr7_2:19778997-19779016 None:intergenic 35.0%
!!! ACCAACTTTATTTTTTGGGG+AGG + chr7_2:19778998-19779017 None:intergenic 35.0%
! CCCAAAAAATAAAGTTGGTC+AGG - chr7_2:19778999-19779018 Msa1051910:CDS 35.0%
!!! CCCTGACCAACTTTATTTTT+TGG + chr7_2:19779003-19779022 None:intergenic 35.0%
! AAAAATAAAGTTGGTCAGGG+AGG - chr7_2:19779003-19779022 Msa1051910:CDS 35.0%
! AAAATAAAGTTGGTCAGGGA+GGG - chr7_2:19779004-19779023 Msa1051910:CDS 35.0%
CTAACCACAAATTGTAGTCA+AGG - chr7_2:19779062-19779081 Msa1051910:CDS 35.0%
ATGACCTTGACTACAATTTG+TGG + chr7_2:19779069-19779088 None:intergenic 35.0%
GTCAAGGTCATTTATCCTAT+TGG - chr7_2:19779078-19779097 Msa1051910:CDS 35.0%
CAAATCCTGGCATAAATTGA+AGG + chr7_2:19779113-19779132 None:intergenic 35.0%
! TTTTGCTGAGAATCCCATTA+TGG - chr7_2:19779202-19779221 Msa1051910:CDS 35.0%
!!! CTAACTGTTTTGGCCATAAT+GGG + chr7_2:19779218-19779237 None:intergenic 35.0%
!!! TCTAACTGTTTTGGCCATAA+TGG + chr7_2:19779219-19779238 None:intergenic 35.0%
AAACAGTATCCATGTTCCTA+AGG - chr7_2:19779248-19779267 Msa1051910:CDS 35.0%
ACCGAAAAAGAACTACACAA+AGG - chr7_2:19779298-19779317 Msa1051910:CDS 35.0%
GATTACCAGACACAGAATAT+GGG + chr7_2:19779380-19779399 None:intergenic 35.0%
ACTAGAATCTCTTGCTTCTA+CGG + chr7_2:19779479-19779498 None:intergenic 35.0%
AATACCGTGATAACAAACAC+TGG - chr7_2:19779518-19779537 Msa1051910:CDS 35.0%
ATGCCTAAAGTGGAATTTGG+TGG - chr7_2:19775009-19775028 Msa1051910:three_prime_UTR 40.0%
CTTCCACCAAATTCCACTTT+AGG + chr7_2:19775015-19775034 None:intergenic 40.0%
GAAGCAGTAACATCCAATGA+AGG + chr7_2:19775072-19775091 None:intergenic 40.0%
CTGCTTCCAAAAGACTTAGA+AGG - chr7_2:19775085-19775104 Msa1051910:three_prime_UTR 40.0%
AAAATTCCGAGCACAATACC+AGG - chr7_2:19775115-19775134 Msa1051910:three_prime_UTR 40.0%
AAATTCCGAGCACAATACCA+GGG - chr7_2:19775116-19775135 Msa1051910:three_prime_UTR 40.0%
TTTGAAGAAAATACGGTGGC+TGG - chr7_2:19775171-19775190 Msa1051910:three_prime_UTR 40.0%
! GACAAGTAATGGAAATGAGC+TGG - chr7_2:19775284-19775303 Msa1051910:three_prime_UTR 40.0%
GTACTTGTAGCAGAATCAAC+TGG + chr7_2:19775441-19775460 None:intergenic 40.0%
ACAAACTCAAATTCAGCGAG+GGG - chr7_2:19775471-19775490 Msa1051910:three_prime_UTR 40.0%
GGTCTTACACAAAGTTCTGT+TGG - chr7_2:19775534-19775553 Msa1051910:three_prime_UTR 40.0%
GAATTTACCATGGAAGTTGC+TGG + chr7_2:19775579-19775598 None:intergenic 40.0%
TTGATATTCTCTAGTGGCTG+TGG - chr7_2:19775646-19775665 Msa1051910:three_prime_UTR 40.0%
AACCCTGACATCAAACTTCT+GGG + chr7_2:19775994-19776013 None:intergenic 40.0%
TGTCAGGGTTGAGACAAAAT+TGG - chr7_2:19776004-19776023 Msa1051910:three_prime_UTR 40.0%
!! GGGTTTGATGATGTTTCTTG+GGG + chr7_2:19776113-19776132 None:intergenic 40.0%
!! GAGGGTTTGATGATGTTTCT+TGG + chr7_2:19776115-19776134 None:intergenic 40.0%
!! GAAACATTTTGAGTAGCAGG+AGG + chr7_2:19776134-19776153 None:intergenic 40.0%
TCAGCTCTATCTGACGTAAA+GGG + chr7_2:19776170-19776189 None:intergenic 40.0%
!! TCTTTCAGGTTCTGAGAGTT+AGG + chr7_2:19776209-19776228 None:intergenic 40.0%
AACTCTCAGAACCTGAAAGA+TGG - chr7_2:19776209-19776228 Msa1051910:exon 40.0%
AACATCTGCCCATGTATTCT+GGG + chr7_2:19776279-19776298 None:intergenic 40.0%
TATGGTCAAGGTCCAATACA+AGG + chr7_2:19776409-19776428 None:intergenic 40.0%
CAAACTTTAATCCATGGGAC+AGG + chr7_2:19776477-19776496 None:intergenic 40.0%
! CTGTCCCATGGATTAAAGTT+TGG - chr7_2:19776475-19776494 Msa1051910:intron 40.0%
TCGACAAACTGAAAGACAGA+AGG + chr7_2:19776516-19776535 None:intergenic 40.0%
CTTAACATCTCATCATGCAC+AGG + chr7_2:19776546-19776565 None:intergenic 40.0%
! GTTTTCCTCATATGGGAATG+TGG - chr7_2:19776613-19776632 Msa1051910:intron 40.0%
TTAGTCCACATTCCCATATG+AGG + chr7_2:19776621-19776640 None:intergenic 40.0%
!!! CAAAGATTTGGAAGGCGTTT+TGG - chr7_2:19776917-19776936 Msa1051910:intron 40.0%
CAAACTGAACCTTATAGTGG+TGG - chr7_2:19776995-19777014 Msa1051910:intron 40.0%
! TGAACCTTATAGTGGTGGAA+AGG - chr7_2:19777000-19777019 Msa1051910:CDS 40.0%
! ATTGGGACGCAAAGAAGTTT+TGG + chr7_2:19777339-19777358 None:intergenic 40.0%
! ATCCACCTCTTCTAAGGATT+GGG + chr7_2:19777356-19777375 None:intergenic 40.0%
ATATCCTAGCTTCAGAACAG+AGG - chr7_2:19777383-19777402 Msa1051910:CDS 40.0%
!!! TTTTCCTCTGTTCTGAAGCT+AGG + chr7_2:19777390-19777409 None:intergenic 40.0%
GAACAGAGGAAAATCTTGGA+TGG - chr7_2:19777397-19777416 Msa1051910:CDS 40.0%
AGTATACCTTATCAGTCCCA+GGG + chr7_2:19777564-19777583 None:intergenic 40.0%
! TCTGTTTGATGGTTGTGCTA+TGG - chr7_2:19777642-19777661 Msa1051910:CDS 40.0%
TAAAATACGTGCACATCAGG+AGG + chr7_2:19777673-19777692 None:intergenic 40.0%
! TCACCTTGATATCCACGTTT+TGG + chr7_2:19777856-19777875 None:intergenic 40.0%
GCAAATGGTAAATAGGGCAA+GGG + chr7_2:19777891-19777910 None:intergenic 40.0%
AGCAAATGGTAAATAGGGCA+AGG + chr7_2:19777892-19777911 None:intergenic 40.0%
AACATAGGACAGGAACAGAA+GGG + chr7_2:19778001-19778020 None:intergenic 40.0%
AAACATAGGACAGGAACAGA+AGG + chr7_2:19778002-19778021 None:intergenic 40.0%
TGGCCCCAATGAAAAAATTG+GGG + chr7_2:19778029-19778048 None:intergenic 40.0%
TTTGTTTCGCACAGGTGAAT+TGG - chr7_2:19778133-19778152 Msa1051910:CDS 40.0%
TTGTTTCGCACAGGTGAATT+GGG - chr7_2:19778134-19778153 Msa1051910:CDS 40.0%
!! GGAAAATTTGTTGTCCATCC+TGG - chr7_2:19778168-19778187 Msa1051910:CDS 40.0%
TTCCTCCTCCCTAAAAAAAC+AGG - chr7_2:19778275-19778294 Msa1051910:CDS 40.0%
TCCTCCTCCCTAAAAAAACA+GGG - chr7_2:19778276-19778295 Msa1051910:CDS 40.0%
!!! GCTTCCACCCTGTTTTTTTA+GGG + chr7_2:19778286-19778305 None:intergenic 40.0%
!!! TGCTTCCACCCTGTTTTTTT+AGG + chr7_2:19778287-19778306 None:intergenic 40.0%
CATCAGCATTGCTTTATAGG+CGG - chr7_2:19778305-19778324 Msa1051910:CDS 40.0%
ATCAGCATTGCTTTATAGGC+GGG - chr7_2:19778306-19778325 Msa1051910:CDS 40.0%
AACCACCTAATAATCCTCTC+TGG - chr7_2:19778365-19778384 Msa1051910:CDS 40.0%
TACCAGAGAGGATTATTAGG+TGG + chr7_2:19778370-19778389 None:intergenic 40.0%
TGAATTCATTAGGTCCGAAC+TGG - chr7_2:19778439-19778458 Msa1051910:CDS 40.0%
TGAGTGGGTATTTATTTGGC+TGG - chr7_2:19778516-19778535 Msa1051910:CDS 40.0%
! GATTGTTGGGATTTTCCTAC+TGG - chr7_2:19778582-19778601 Msa1051910:CDS 40.0%
! TGGGATTTTCCTACTGGATT+TGG - chr7_2:19778588-19778607 Msa1051910:CDS 40.0%
! GATTTTCCTACTGGATTTGG+TGG - chr7_2:19778591-19778610 Msa1051910:CDS 40.0%
! GCAAATGAGTTGACTGCTTT+AGG - chr7_2:19778628-19778647 Msa1051910:CDS 40.0%
! GACTAGGTGAGTGTTATTGT+GGG - chr7_2:19778651-19778670 Msa1051910:CDS 40.0%
! ACTAGGTGAGTGTTATTGTG+GGG - chr7_2:19778652-19778671 Msa1051910:CDS 40.0%
TGACTTATGTGAACCTGAGA+TGG - chr7_2:19778676-19778695 Msa1051910:CDS 40.0%
ATTAGTCCTTGAGTCTAAGG+AGG - chr7_2:19778826-19778845 Msa1051910:intron 40.0%
!!! AGTCAGGATTTTTTTGGAGG+TGG - chr7_2:19778869-19778888 Msa1051910:intron 40.0%
!! GACTGCTAAAGCATTTTAGG+GGG - chr7_2:19778946-19778965 Msa1051910:intron 40.0%
CCCTCCCCAAAAAATAAAGT+TGG - chr7_2:19778994-19779013 Msa1051910:CDS 40.0%
TTCAGCCTTCAATTTATGCC+AGG - chr7_2:19779105-19779124 Msa1051910:CDS 40.0%
GGATTACCAGACACAGAATA+TGG + chr7_2:19779381-19779400 None:intergenic 40.0%
GACTGTTGAAGAGCCTTCAT+TGG - chr7_2:19775056-19775075 Msa1051910:three_prime_UTR 45.0%
TACCAGGGAGGAAAAAGCTA+TGG - chr7_2:19775131-19775150 Msa1051910:three_prime_UTR 45.0%
GAAAAAGCTATGGCTGGGAA+AGG - chr7_2:19775141-19775160 Msa1051910:three_prime_UTR 45.0%
!! CTGGATCTCAGTTGGTAGAA+TGG - chr7_2:19775190-19775209 Msa1051910:three_prime_UTR 45.0%
AAGGGGAAACTGAACTCCAA+AGG - chr7_2:19775229-19775248 Msa1051910:three_prime_UTR 45.0%
ACAGATGCAACTGTGAACAC+TGG - chr7_2:19775495-19775514 Msa1051910:three_prime_UTR 45.0%
TTCATCACCAGCAACTTCCA+TGG - chr7_2:19775569-19775588 Msa1051910:three_prime_UTR 45.0%
CTTTCCAGAATCCTCTGGTA+GGG + chr7_2:19775829-19775848 None:intergenic 45.0%
TCTTTCCAGAATCCTCTGGT+AGG + chr7_2:19775830-19775849 None:intergenic 45.0%
CGAATCTTTCCAGAATCCTC+TGG + chr7_2:19775834-19775853 None:intergenic 45.0%
GAAAGATTCGCATGAAACCC+CGG - chr7_2:19775844-19775863 Msa1051910:three_prime_UTR 45.0%
AAAGATTCGCATGAAACCCC+GGG - chr7_2:19775845-19775864 Msa1051910:three_prime_UTR 45.0%
CAAAATCCCACTCTTCTGGA+GGG + chr7_2:19775901-19775920 None:intergenic 45.0%
! CTCCAGAAGAGTGGGATTTT+GGG - chr7_2:19775900-19775919 Msa1051910:three_prime_UTR 45.0%
! TCCAGAAGAGTGGGATTTTG+GGG - chr7_2:19775901-19775920 Msa1051910:three_prime_UTR 45.0%
CGTAGGGGATACAATTGCTT+TGG + chr7_2:19775937-19775956 None:intergenic 45.0%
ATGCCCAGAAGTTTGATGTC+AGG - chr7_2:19775988-19776007 Msa1051910:three_prime_UTR 45.0%
TGCCCAGAAGTTTGATGTCA+GGG - chr7_2:19775989-19776008 Msa1051910:three_prime_UTR 45.0%
CAACCCTGACATCAAACTTC+TGG + chr7_2:19775995-19776014 None:intergenic 45.0%
CTCAGCTCTATCTGACGTAA+AGG + chr7_2:19776171-19776190 None:intergenic 45.0%
CAGAACCTGAAAGATGGTGT+AGG - chr7_2:19776215-19776234 Msa1051910:CDS 45.0%
CTGATCCTACACCATCTTTC+AGG + chr7_2:19776223-19776242 None:intergenic 45.0%
ACATCTGCCCATGTATTCTG+GGG + chr7_2:19776278-19776297 None:intergenic 45.0%
CAACATCTGCCCATGTATTC+TGG + chr7_2:19776280-19776299 None:intergenic 45.0%
TAGGAAGCTGTGCCTTGTAT+TGG - chr7_2:19776394-19776413 Msa1051910:CDS 45.0%
!!! GATGTCTCTGAGGCTTTTCA+CGG + chr7_2:19776587-19776606 None:intergenic 45.0%
! ATGTGGACTAAACTCAGACC+AGG - chr7_2:19776630-19776649 Msa1051910:intron 45.0%
!! GCAAAGGTGCTTGATCCAAA+GGG - chr7_2:19776831-19776850 Msa1051910:intron 45.0%
!! CCAAAGGGAGTATTGTTTGC+CGG - chr7_2:19776846-19776865 Msa1051910:intron 45.0%
!! GCCGGTAGAGTTATTTCTAG+AGG - chr7_2:19776864-19776883 Msa1051910:intron 45.0%
TAGACGATTCTGTGAGAGTC+TGG - chr7_2:19776964-19776983 Msa1051910:intron 45.0%
CTGACCTTTCCACCACTATA+AGG + chr7_2:19777007-19777026 None:intergenic 45.0%
ACACATACTTCCCATGTAGC+AGG - chr7_2:19777132-19777151 Msa1051910:CDS 45.0%
CAAATTGACGCCTGCTACAT+GGG + chr7_2:19777145-19777164 None:intergenic 45.0%
CATGTAGCAGGCGTCAATTT+GGG - chr7_2:19777144-19777163 Msa1051910:CDS 45.0%
ATTCCTTCTCTTCTCGGAGT+AGG - chr7_2:19777297-19777316 Msa1051910:intron 45.0%
! CATCCACCTCTTCTAAGGAT+TGG + chr7_2:19777357-19777376 None:intergenic 45.0%
TCTGACATCCACCTCTTCTA+AGG + chr7_2:19777362-19777381 None:intergenic 45.0%
ATGTAGTTGCTCATTCCCCT+GGG - chr7_2:19777545-19777564 Msa1051910:intron 45.0%
GTATACCTTATCAGTCCCAG+GGG + chr7_2:19777563-19777582 None:intergenic 45.0%
CAGTATACCTTATCAGTCCC+AGG + chr7_2:19777565-19777584 None:intergenic 45.0%
TGGGGAGAAAAACATAGGAC+AGG + chr7_2:19778011-19778030 None:intergenic 45.0%
!! AGTGCTACTTTGTTTCGCAC+AGG - chr7_2:19778125-19778144 Msa1051910:intron 45.0%
GTGAATTGGGCTATTGCCAA+TGG - chr7_2:19778147-19778166 Msa1051910:CDS 45.0%
!! AATTTGTTGTCCATCCTGGC+TGG - chr7_2:19778172-19778191 Msa1051910:CDS 45.0%
! TTATAAGGTACTCACCAGCC+AGG + chr7_2:19778189-19778208 None:intergenic 45.0%
!!! ACCCTGTTTTTTTAGGGAGG+AGG + chr7_2:19778280-19778299 None:intergenic 45.0%
TCCTCCCTAAAAAAACAGGG+TGG - chr7_2:19778279-19778298 Msa1051910:CDS 45.0%
!!! TCCACCCTGTTTTTTTAGGG+AGG + chr7_2:19778283-19778302 None:intergenic 45.0%
CGGGTGTGTGTGAATTCATT+AGG - chr7_2:19778429-19778448 Msa1051910:CDS 45.0%
! ACTGTTTTCCCTGACCAGTT+CGG + chr7_2:19778456-19778475 None:intergenic 45.0%
ATAACCACCTCCAATGGACA+GGG + chr7_2:19778493-19778512 None:intergenic 45.0%
AATAACCACCTCCAATGGAC+AGG + chr7_2:19778494-19778513 None:intergenic 45.0%
TGTCCATTGGAGGTGGTTAT+TGG - chr7_2:19778493-19778512 Msa1051910:CDS 45.0%
TCACCAATAACCACCTCCAA+TGG + chr7_2:19778499-19778518 None:intergenic 45.0%
TCCATAAACTCCTCAGCATC+TGG + chr7_2:19778542-19778561 None:intergenic 45.0%
AGATGCTGAGGAGTTTATGG+AGG - chr7_2:19778541-19778560 Msa1051910:CDS 45.0%
!! AGTTGACTGCTTTAGGGACT+AGG - chr7_2:19778635-19778654 Msa1051910:CDS 45.0%
! GGACTAGGTGAGTGTTATTG+TGG - chr7_2:19778650-19778669 Msa1051910:CDS 45.0%
AACCTGAGATGGTGACAAGA+GGG - chr7_2:19778687-19778706 Msa1051910:CDS 45.0%
TGAAGGCTGAAGCAACCAAT+AGG + chr7_2:19779096-19779115 None:intergenic 45.0%
ATGGTCCCATATTCTGTGTC+TGG - chr7_2:19779372-19779391 Msa1051910:CDS 45.0%
CAGTTGCAATGTCTGTCGTA+TGG - chr7_2:19779419-19779438 Msa1051910:CDS 45.0%
!!! TAAATTTTATATTATATGTT+AGG - chr7_2:19776681-19776700 Msa1051910:intron 5.0%
TTCCTCCCTGGTATTGTGCT+CGG + chr7_2:19775124-19775143 None:intergenic 50.0%
!! AGCCATAGCTTTTTCCTCCC+TGG + chr7_2:19775136-19775155 None:intergenic 50.0%
AGGGAGGAAAAAGCTATGGC+TGG - chr7_2:19775135-19775154 Msa1051910:three_prime_UTR 50.0%
GGGAGGAAAAAGCTATGGCT+GGG - chr7_2:19775136-19775155 Msa1051910:three_prime_UTR 50.0%
AAAGCTATGGCTGGGAAAGG+TGG - chr7_2:19775144-19775163 Msa1051910:three_prime_UTR 50.0%
AATGAGCTGGCATCCGTTAC+TGG - chr7_2:19775297-19775316 Msa1051910:three_prime_UTR 50.0%
AGAAGTGGGTAAGGAAGCTG+TGG + chr7_2:19775331-19775350 None:intergenic 50.0%
GGGCTTCTGCTTCATTGTGT+TGG + chr7_2:19775410-19775429 None:intergenic 50.0%
! GAAGTTGCTGGTGATGAAGC+TGG + chr7_2:19775567-19775586 None:intergenic 50.0%
TCAGACACAAACCCTACCAG+AGG - chr7_2:19775815-19775834 Msa1051910:three_prime_UTR 50.0%
CAAACCCTACCAGAGGATTC+TGG - chr7_2:19775822-19775841 Msa1051910:three_prime_UTR 50.0%
!! GATCCACGTCGTTTTCTCCA+TGG - chr7_2:19775867-19775886 Msa1051910:three_prime_UTR 50.0%
CTTCCATGGAGAAAACGACG+TGG + chr7_2:19775873-19775892 None:intergenic 50.0%
CCAAAATCCCACTCTTCTGG+AGG + chr7_2:19775902-19775921 None:intergenic 50.0%
! CCTCCAGAAGAGTGGGATTT+TGG - chr7_2:19775899-19775918 Msa1051910:three_prime_UTR 50.0%
TCCCCAAAATCCCACTCTTC+TGG + chr7_2:19775905-19775924 None:intergenic 50.0%
TTCCCTGGTTACTTGGCGTA+GGG + chr7_2:19775953-19775972 None:intergenic 50.0%
GTCAGATAGAGCTGAGCAGA+AGG - chr7_2:19776175-19776194 Msa1051910:three_prime_UTR 50.0%
GATAGAGCTGAGCAGAAGGA+TGG - chr7_2:19776179-19776198 Msa1051910:three_prime_UTR 50.0%
GAACCTGGTGCACATGTTTC+AGG + chr7_2:19776248-19776267 None:intergenic 50.0%
CTCTCGACCCCAGAATACAT+GGG - chr7_2:19776268-19776287 Msa1051910:intron 50.0%
CTAAACTCAGACCAGGAGTC+TGG - chr7_2:19776637-19776656 Msa1051910:intron 50.0%
! AGTCTGGAACTTCCTGGAGA+AGG - chr7_2:19776653-19776672 Msa1051910:intron 50.0%
!! GGCAAAGGTGCTTGATCCAA+AGG - chr7_2:19776830-19776849 Msa1051910:intron 50.0%
CCGGCAAACAATACTCCCTT+TGG + chr7_2:19776849-19776868 None:intergenic 50.0%
!!! TTTGGAAGGCGTTTTGGGCA+TGG - chr7_2:19776923-19776942 Msa1051910:intron 50.0%
CCAAATTGACGCCTGCTACA+TGG + chr7_2:19777146-19777165 None:intergenic 50.0%
CCATGTAGCAGGCGTCAATT+TGG - chr7_2:19777143-19777162 Msa1051910:CDS 50.0%
ATCTCAAGAAGAGAAGGGCC+AGG + chr7_2:19777173-19777192 None:intergenic 50.0%
TGGAACTCTGGCATCCTCTT+TGG - chr7_2:19777217-19777236 Msa1051910:CDS 50.0%
GGAACTCTGGCATCCTCTTT+GGG - chr7_2:19777218-19777237 Msa1051910:CDS 50.0%
GAACTCTGGCATCCTCTTTG+GGG - chr7_2:19777219-19777238 Msa1051910:CDS 50.0%
AACTCTGGCATCCTCTTTGG+GGG - chr7_2:19777220-19777239 Msa1051910:CDS 50.0%
TCACCTACTCCGAGAAGAGA+AGG + chr7_2:19777303-19777322 None:intergenic 50.0%
TGCGTCCCAATCCTTAGAAG+AGG - chr7_2:19777348-19777367 Msa1051910:CDS 50.0%
GTCCCAATCCTTAGAAGAGG+TGG - chr7_2:19777351-19777370 Msa1051910:CDS 50.0%
GTTCAGCTGTCTGCCACAAT+GGG + chr7_2:19777480-19777499 None:intergenic 50.0%
TGTTCAGCTGTCTGCCACAA+TGG + chr7_2:19777481-19777500 None:intergenic 50.0%
TGGCAGACAGCTGAACAGTT+TGG - chr7_2:19777484-19777503 Msa1051910:intron 50.0%
CATGTAGTTGCTCATTCCCC+TGG - chr7_2:19777544-19777563 Msa1051910:intron 50.0%
TCATTCCCCTGGGACTGATA+AGG - chr7_2:19777555-19777574 Msa1051910:CDS 50.0%
!! GAGGAGGCACTACCATAACA+AGG + chr7_2:19777605-19777624 None:intergenic 50.0%
TGTGATAGATGGGACAGACG+TGG - chr7_2:19778073-19778092 Msa1051910:intron 50.0%
TCATTAGGTCCGAACTGGTC+AGG - chr7_2:19778444-19778463 Msa1051910:CDS 50.0%
CATTAGGTCCGAACTGGTCA+GGG - chr7_2:19778445-19778464 Msa1051910:CDS 50.0%
AATTGTGACCCCCTGTCCAT+TGG - chr7_2:19778480-19778499 Msa1051910:CDS 50.0%
TAACCACCTCCAATGGACAG+GGG + chr7_2:19778492-19778511 None:intergenic 50.0%
TGGAGGTGGTTATTGGTGAG+TGG - chr7_2:19778500-19778519 Msa1051910:CDS 50.0%
GGAGGTGGTTATTGGTGAGT+GGG - chr7_2:19778501-19778520 Msa1051910:CDS 50.0%
GCCAGATGCTGAGGAGTTTA+TGG - chr7_2:19778538-19778557 Msa1051910:CDS 50.0%
CCATAGCCACCAAATCCAGT+AGG + chr7_2:19778600-19778619 None:intergenic 50.0%
!! CCTACTGGATTTGGTGGCTA+TGG - chr7_2:19778597-19778616 Msa1051910:CDS 50.0%
!! ACTGGATTTGGTGGCTATGG+TGG - chr7_2:19778600-19778619 Msa1051910:CDS 50.0%
!! CTGGATTTGGTGGCTATGGT+GGG - chr7_2:19778601-19778620 Msa1051910:CDS 50.0%
GAACCTGAGATGGTGACAAG+AGG - chr7_2:19778686-19778705 Msa1051910:CDS 50.0%
TTCCCTCTTGTCACCATCTC+AGG + chr7_2:19778692-19778711 None:intergenic 50.0%
TCCTTGAGTCTAAGGAGGTG+AGG - chr7_2:19778831-19778850 Msa1051910:intron 50.0%
CCTTGAGTCTAAGGAGGTGA+GGG - chr7_2:19778832-19778851 Msa1051910:intron 50.0%
GGAGCTAGAACGACAAAGTC+AGG - chr7_2:19778853-19778872 Msa1051910:intron 50.0%
TTTGGGGAGGGAATGGTGAA+TGG + chr7_2:19778985-19779004 None:intergenic 50.0%
CTGTGTCTGGTAATCCTAGC+TGG - chr7_2:19779385-19779404 Msa1051910:CDS 50.0%
TTCCGAGCACAATACCAGGG+AGG - chr7_2:19775119-19775138 Msa1051910:three_prime_UTR 55.0%
CTATGGCTGGGAAAGGTGGT+TGG - chr7_2:19775148-19775167 Msa1051910:three_prime_UTR 55.0%
TACGGTGGCTGGATCTCAGT+TGG - chr7_2:19775182-19775201 Msa1051910:three_prime_UTR 55.0%
TGTGGCGCTGCTACCAGTAA+CGG + chr7_2:19775313-19775332 None:intergenic 55.0%
ACTGGTCCAGCAATGACTGC+CGG - chr7_2:19775513-19775532 Msa1051910:three_prime_UTR 55.0%
GTAAGACCGGCAGTCATTGC+TGG + chr7_2:19775522-19775541 None:intergenic 55.0%
AGAAAACGACGTGGATCCCG+GGG + chr7_2:19775864-19775883 None:intergenic 55.0%
GAGAAAACGACGTGGATCCC+GGG + chr7_2:19775865-19775884 None:intergenic 55.0%
GGAGAAAACGACGTGGATCC+CGG + chr7_2:19775866-19775885 None:intergenic 55.0%
!! TCTGGAGGGTGCTACTTCCA+TGG + chr7_2:19775887-19775906 None:intergenic 55.0%
AGTAGCACCCTCCAGAAGAG+TGG - chr7_2:19775891-19775910 Msa1051910:three_prime_UTR 55.0%
GTAGCACCCTCCAGAAGAGT+GGG - chr7_2:19775892-19775911 Msa1051910:three_prime_UTR 55.0%
ATCCCCTACGCCAAGTAACC+AGG - chr7_2:19775947-19775966 Msa1051910:three_prime_UTR 55.0%
TCCCCTACGCCAAGTAACCA+GGG - chr7_2:19775948-19775967 Msa1051910:three_prime_UTR 55.0%
TCCCTGGTTACTTGGCGTAG+GGG + chr7_2:19775952-19775971 None:intergenic 55.0%
GTTCCCTGGTTACTTGGCGT+AGG + chr7_2:19775954-19775973 None:intergenic 55.0%
ACGCCAAGTAACCAGGGAAC+TGG - chr7_2:19775954-19775973 Msa1051910:three_prime_UTR 55.0%
CGCCAAGTAACCAGGGAACT+GGG - chr7_2:19775955-19775974 Msa1051910:three_prime_UTR 55.0%
GCCAAGTAACCAGGGAACTG+GGG - chr7_2:19775956-19775975 Msa1051910:three_prime_UTR 55.0%
TCCCCAGTTCCCTGGTTACT+TGG + chr7_2:19775960-19775979 None:intergenic 55.0%
TGACATTGTCCCCAGTTCCC+TGG + chr7_2:19775968-19775987 None:intergenic 55.0%
GCTCCTGAAACATGTGCACC+AGG - chr7_2:19776242-19776261 Msa1051910:CDS 55.0%
!! CCATGTATTCTGGGGTCGAG+AGG + chr7_2:19776270-19776289 None:intergenic 55.0%
CCTCTCGACCCCAGAATACA+TGG - chr7_2:19776267-19776286 Msa1051910:intron 55.0%
ATGGGTTCTCTCCTGTCCCA+TGG - chr7_2:19776463-19776482 Msa1051910:intron 55.0%
! ACCAGGAGTCTGGAACTTCC+TGG - chr7_2:19776647-19776666 Msa1051910:intron 55.0%
TCCAGGAAGTTCCAGACTCC+TGG + chr7_2:19776651-19776670 None:intergenic 55.0%
AGGCGTCAATTTGGGCTTCC+TGG - chr7_2:19777152-19777171 Msa1051910:CDS 55.0%
!! GAGACCTGACTCTGGAACTC+TGG - chr7_2:19777205-19777224 Msa1051910:CDS 55.0%
GATGCCAGAGTTCCAGAGTC+AGG + chr7_2:19777212-19777231 None:intergenic 55.0%
CAATGGGTGAAGGTGGGGAT+TGG + chr7_2:19777464-19777483 None:intergenic 55.0%
ATCCCCACCTTCACCCATTG+TGG - chr7_2:19777464-19777483 Msa1051910:intron 55.0%
TGCCACAATGGGTGAAGGTG+GGG + chr7_2:19777469-19777488 None:intergenic 55.0%
CTGCCACAATGGGTGAAGGT+GGG + chr7_2:19777470-19777489 None:intergenic 55.0%
TCTGCCACAATGGGTGAAGG+TGG + chr7_2:19777471-19777490 None:intergenic 55.0%
CTGTCTGCCACAATGGGTGA+AGG + chr7_2:19777474-19777493 None:intergenic 55.0%
ATAGGGCAAGGGTAGCTGCA+TGG + chr7_2:19777880-19777899 None:intergenic 55.0%
! AAGGTACTCACCAGCCAGGA+TGG + chr7_2:19778185-19778204 None:intergenic 55.0%
AACCACCTCCAATGGACAGG+GGG + chr7_2:19778491-19778510 None:intergenic 55.0%
! ATTTGGCTGGCCAGATGCTG+AGG - chr7_2:19778529-19778548 Msa1051910:CDS 55.0%
CCCTCACCTCCTTAGACTCA+AGG + chr7_2:19778835-19778854 None:intergenic 55.0%
! AAAGTTGGTCAGGGAGGGAG+AGG - chr7_2:19779009-19779028 Msa1051910:CDS 55.0%
CTGCATGACAGATGCCAGCT+AGG + chr7_2:19779402-19779421 None:intergenic 55.0%
!! TTCTGGGGTCGAGAGGAACC+TGG + chr7_2:19776263-19776282 None:intergenic 60.0%
CACGACGAGAGACCTGACTC+TGG - chr7_2:19777197-19777216 Msa1051910:CDS 60.0%
! TGGGGATTGGCATCGCCAAC+AGG + chr7_2:19777451-19777470 None:intergenic 60.0%
TGTGACCCCCTGTCCATTGG+AGG - chr7_2:19778483-19778502 Msa1051910:CDS 60.0%
GACCCCCTGTCCATTGGAGG+TGG - chr7_2:19778486-19778505 Msa1051910:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 19775005 19779571 19775005 ID=Msa1051910;Name=Msa1051910
chr7_2 mRNA 19775005 19779571 19775005 ID=Msa1051910-mRNA-1;Parent=Msa1051910;Name=Msa1051910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=4|1|0.87|1|1|1|8|1205|699
chr7_2 exon 19775005 19776279 19775005 ID=Msa1051910-mRNA-1:exon:4352;Parent=Msa1051910-mRNA-1
chr7_2 exon 19776383 19776429 19776383 ID=Msa1051910-mRNA-1:exon:4351;Parent=Msa1051910-mRNA-1
chr7_2 exon 19777000 19777257 19777000 ID=Msa1051910-mRNA-1:exon:4350;Parent=Msa1051910-mRNA-1
chr7_2 exon 19777335 19777446 19777335 ID=Msa1051910-mRNA-1:exon:4349;Parent=Msa1051910-mRNA-1
chr7_2 exon 19777555 19777808 19777555 ID=Msa1051910-mRNA-1:exon:4348;Parent=Msa1051910-mRNA-1
chr7_2 exon 19777902 19778048 19777902 ID=Msa1051910-mRNA-1:exon:4347;Parent=Msa1051910-mRNA-1
chr7_2 exon 19778128 19778757 19778128 ID=Msa1051910-mRNA-1:exon:4346;Parent=Msa1051910-mRNA-1
chr7_2 exon 19778986 19779571 19778986 ID=Msa1051910-mRNA-1:exon:4345;Parent=Msa1051910-mRNA-1
chr7_2 five_prime_UTR 19779568 19779571 19779568 ID=Msa1051910-mRNA-1:five_prime_utr;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19778986 19779567 19778986 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19778128 19778757 19778128 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19777902 19778048 19777902 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19777555 19777808 19777555 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19777335 19777446 19777335 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19777000 19777257 19777000 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19776383 19776429 19776383 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 CDS 19776210 19776279 19776210 ID=Msa1051910-mRNA-1:cds;Parent=Msa1051910-mRNA-1
chr7_2 three_prime_UTR 19775005 19776209 19775005 ID=Msa1051910-mRNA-1:three_prime_utr;Parent=Msa1051910-mRNA-1
Gene Sequence

>Msa1051910

ATGCCTAAAGTGGAATTTGGTGGAAGAGTAATCTCAAGAAAGCAAAAGACTGTTGAAGAGCCTTCATTGGATGTTACTGCTTCCAAAAGACTTAGAAGGTCTTTGGAAAATTCCGAGCACAATACCAGGGAGGAAAAAGCTATGGCTGGGAAAGGTGGTTGGTTTGAAGAAAATACGGTGGCTGGATCTCAGTTGGTAGAATGGAACCATTTAATGCAAAAAGGGGAAACTGAACTCCAAAGGCCTATAAGTACTAGTTCTAGTAATTTGACCGTGACAAGTAATGGAAATGAGCTGGCATCCGTTACTGGTAGCAGCGCCACAGCTTCCTTACCCACTTCTTTATTGAATAATATTGCTGTAAATCCAGCCATGTTAATACATATGCTTTTAGAGCACCAACACAATGAAGCAGAAGCCCAAAAGAAACCAGTTGATTCTGCTACAAGTACACTGCATTTAACAAACTCAAATTCAGCGAGGGGAACAGATGCAACTGTGAACACTGGTCCAGCAATGACTGCCGGTCTTACACAAAGTTCTGTTGGAATACTTCCAGCTTCATCACCAGCAACTTCCATGACACAAACCCTACCAGAGGATTCTGGAAAGATTCGCATGAAACCCCGGGATCCACGTCGTTTTCTCCATGGAAGTAGCACCCTCCAGAAGAGTGGGATTTTGGGGAGTGAACAATCCAAAGCAATTGTATCCCCTACGCCAAGTAACCAGGGAACTGGGGACAATGTCAATGCCCAGAAGTTTGATGTCAGGGTTGAGACAAAATTGGCACCTATTCAATCAATTGCACAACCTGATATTACTCGACAGTTTACCAAGAATCTGAAAAACATTGCTGATATTATGTCTGTTCCCCAAGAAACATCATCAAACCCTCCTGCTACTCAAAATGTTTCTTCTGCATCTGTTCCCTTTACGTCAGATAGAGCTGAGCAGAAGGATGGTGTACCTAACTCTCAGAACCTGAAAGATGGTGTAGGATCAGCTCCTGAAACATGTGCACCAGGTTCCTCTCGACCCCAGAATACATGGGCAGATGTTGAGCACCTCTTTGAAGCTTATGATGTGAAGCAGAAAGCTGCTATACAAAGAGAGAGATATAGGAGGCTTGAAGAACAGAAAAAAATGTTTGCTGCTAGGAAGCTGTGCCTTGTATTGGACCTTGACCATACACTTCTTAATTCTGCTAAGTTTGTCGAAGTTGATCCTGTGCATGATGAGATGTTAAGAAAGAAAGAACAAGAAGACCGTGAAAAGCCTCAGAGACATCTTTTTCGTTTTCCTCATATGGGAATGTGGACTAAACTCAGACCAGGAGTCTGGAACTTCCTGGAGAAGGCTAGTAAACTCTTTGAGATGCATCTTTACACTATGGGAAACAAGCTATATGCAACTGAAATGGCAAAGGTGCTTGATCCAAAGGGAGTATTGTTTGCCGGTAGAGTTATTTCTAGAGGTGATGATGCTGAAACAGCTGATACTAAAAGCAAAGATTTGGAAGGCGTTTTGGGCATGGAATCATCTGTTGTAATTATAGACGATTCTGTGAGAGTCTGGCCTCATAACAAACTGAACCTTATAGTGGTGGAAAGGTACACATACTTCCCATGTAGCAGGCGTCAATTTGGGCTTCCTGGCCCTTCTCTTCTTGAGATTGATCACGACGAGAGACCTGACTCTGGAACTCTGGCATCCTCTTTGGGGGTGATTGAGAGAATACACCAAAACTTCTTTGCGTCCCAATCCTTAGAAGAGGTGGATGTCAGAAATATCCTAGCTTCAGAACAGAGGAAAATCTTGGATGGTTGTCGTATAGTATTTAGTAGGATGTTTCCTGTTGGCGATGCCAATCCCCACCTTCACCCATTGTGGCAGACAGCTGAACAGTTTGGTGCTTCTTGCACAAACCAAATTGATGATCAGGTTACTCATGTAGTTGCTCATTCCCCTGGGACTGATAAGGTGAATTGGGCTATTGCCAATGGAAAATTTGTTGTCCATCCTGGCTGGGTGGAAGCATCAGCATTGCTTTATAGGCGGGCGAATGAGCAAGATTTTGCCATTAAACTAGACAAATAA
Protein sequence

>Msa1051910

MPKVEFGGRVISRKQKTVEEPSLDVTASKRLRRSLENSEHNTREEKAMAGKGGWFEENTVAGSQLVEWNHLMQKGETELQRPISTSSSNLTVTSNGNELASVTGSSATASLPTSLLNNIAVNPAMLIHMLLEHQHNEAEAQKKPVDSATSTLHLTNSNSARGTDATVNTGPAMTAGLTQSSVGILPASSPATSMTQTLPEDSGKIRMKPRDPRRFLHGSSTLQKSGILGSEQSKAIVSPTPSNQGTGDNVNAQKFDVRVETKLAPIQSIAQPDITRQFTKNLKNIADIMSVPQETSSNPPATQNVSSASVPFTSDRAEQKDGVPNSQNLKDGVGSAPETCAPGSSRPQNTWADVEHLFEAYDVKQKAAIQRERYRRLEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEMLRKKEQEDREKPQRHLFRFPHMGMWTKLRPGVWNFLEKASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDAETADTKSKDLEGVLGMESSVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPDSGTLASSLGVIERIHQNFFASQSLEEVDVRNILASEQRKILDGCRIVFSRMFPVGDANPHLHPLWQTAEQFGASCTNQIDDQVTHVVAHSPGTDKVNWAIANGKFVVHPGWVEASALLYRRANEQDFAIKLDK*