Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055050 | XP_013448051.1 | 97.768 | 224 | 4 | 1 | 1 | 224 | 1 | 223 | 2.07e-156 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055050 | sp|Q9SE42|RPE1_ORYSJ | 84.862 | 218 | 32 | 1 | 6 | 223 | 8 | 224 | 4.05e-136 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055050 | A0A072TYY4 | 97.768 | 224 | 4 | 1 | 1 | 224 | 1 | 223 | 9.90e-157 | 442 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011660 | Msa1055050 | -0.804287 | 2.322490e-49 | -8.615850e-47 |
| Msa0876480 | Msa1055050 | 0.837461 | 5.128633e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055050 | MtrunA17_Chr7g0225861 | 97.768 | 224 | 4 | 1 | 1 | 224 | 1 | 223 | 1.91e-160 | 442 |
| Msa1055050 | MtrunA17_Chr3g0095051 | 81.061 | 132 | 3 | 3 | 71 | 198 | 1 | 114 | 3.10e-65 | 198 |
| Msa1055050 | MtrunA17_Chr4g0060951 | 38.073 | 218 | 126 | 4 | 7 | 219 | 60 | 273 | 2.29e-41 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055050 | AT3G01850.1 | 79.638 | 221 | 44 | 1 | 3 | 223 | 2 | 221 | 2.78e-134 | 376 |
| Msa1055050 | AT3G01850.2 | 79.638 | 221 | 44 | 1 | 3 | 223 | 2 | 221 | 2.78e-134 | 376 |
| Msa1055050 | AT1G63290.1 | 78.924 | 223 | 46 | 1 | 1 | 223 | 2 | 223 | 1.35e-128 | 362 |
| Msa1055050 | AT3G01850.3 | 80.110 | 181 | 36 | 0 | 43 | 223 | 14 | 194 | 1.53e-111 | 318 |
| Msa1055050 | AT3G01850.4 | 80.110 | 181 | 36 | 0 | 43 | 223 | 14 | 194 | 1.53e-111 | 318 |
| Msa1055050 | AT5G61410.1 | 38.073 | 218 | 126 | 4 | 7 | 219 | 60 | 273 | 5.22e-41 | 141 |
| Msa1055050 | AT5G61410.2 | 38.073 | 218 | 126 | 4 | 7 | 219 | 60 | 273 | 5.22e-41 | 141 |
Find 78 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCGTGTGACTTAATATTT+TGG | 0.153490 | 7_2:-28251932 | None:intergenic |
| ATCATCTGACTTCGCTAATT+TGG | 0.209722 | 7_2:+28248749 | Msa1055050:CDS |
| AAACTGTAAAGAGGCATAAA+AGG | 0.212145 | 7_2:+28255828 | Msa1055050:three_prime_UTR |
| GGAGCGCCCATAGTTAAATT+AGG | 0.213679 | 7_2:-28251518 | None:intergenic |
| CAACCATTGCAGGGCATATC+TGG | 0.234048 | 7_2:+28251667 | Msa1055050:intron |
| TTGGGAAAAGCTGGTGCTTC+TGG | 0.245176 | 7_2:+28251734 | Msa1055050:CDS |
| TCTTGATTATGTTGAACCTT+TGG | 0.292455 | 7_2:+28251715 | Msa1055050:CDS |
| CTTGATTATGTTGAACCTTT+GGG | 0.320952 | 7_2:+28251716 | Msa1055050:CDS |
| CGCTGATGCAGCCACATCTA+TGG | 0.337088 | 7_2:-28255575 | None:intergenic |
| GATATTACATGAGCTGGTTC+AGG | 0.339498 | 7_2:-28255640 | None:intergenic |
| TTTCTCAAGCTTTCAATGAT+TGG | 0.341777 | 7_2:-28251539 | None:intergenic |
| CCATACAACAACATCAATAA+TGG | 0.345560 | 7_2:-28255710 | None:intergenic |
| ACCTCTTCGACGGATGTTCC+AGG | 0.369177 | 7_2:-28251978 | None:intergenic |
| TGATCAATTCCGGCGCTGAT+TGG | 0.373482 | 7_2:+28248790 | Msa1055050:CDS |
| GAGCGCCCATAGTTAAATTA+GGG | 0.385677 | 7_2:-28251517 | None:intergenic |
| TGGTTGGTTGTAGCTGCTTT+TGG | 0.387564 | 7_2:-28248621 | None:intergenic |
| ATGACTGTAGAACCAGGATT+TGG | 0.408120 | 7_2:+28252259 | Msa1055050:CDS |
| GGAGCGAATTGCATTGTTGC+TGG | 0.409909 | 7_2:+28255598 | Msa1055050:CDS |
| GTTGCTGGAAGTTCAGTGTT+TGG | 0.413074 | 7_2:+28255613 | Msa1055050:CDS |
| CAAACCAGGTCCGGATACTA+AGG | 0.416716 | 7_2:+28252422 | Msa1055050:intron |
| CAATATTCAACAAAGGGCTT+AGG | 0.422997 | 7_2:-28255871 | None:intergenic |
| AAAATTTATGCCAGAGATGA+TGG | 0.429025 | 7_2:+28252288 | Msa1055050:CDS |
| GCTCATCGTATGATCAATTC+CGG | 0.445858 | 7_2:+28248780 | Msa1055050:CDS |
| CCATTATTGATGTTGTTGTA+TGG | 0.454258 | 7_2:+28255710 | Msa1055050:three_prime_UTR |
| AAACTTCAATATTCAACAAA+GGG | 0.456560 | 7_2:-28255877 | None:intergenic |
| TTTGTCCCTAATTTAACTAT+GGG | 0.464194 | 7_2:+28251512 | Msa1055050:CDS |
| CAAGAGGATTTGTAACCATC+AGG | 0.465203 | 7_2:-28251697 | None:intergenic |
| AGCTGAAAATCCTGTGGAAA+TGG | 0.466494 | 7_2:+28252228 | Msa1055050:CDS |
| GGTACTTCTTCCTTAGTATC+CGG | 0.475921 | 7_2:-28252432 | None:intergenic |
| GTTTCTTCACGATTCAGTAT+TGG | 0.480219 | 7_2:-28248641 | None:intergenic |
| AATACCTTGTCCATCATCTC+TGG | 0.493165 | 7_2:-28252298 | None:intergenic |
| AAGTCACACGGCATGAGGCC+TGG | 0.496933 | 7_2:+28251942 | Msa1055050:CDS |
| ATAGATGTGGCTGCATCAGC+GGG | 0.498903 | 7_2:+28255577 | Msa1055050:CDS |
| ATATTACATGAGCTGGTTCA+GGG | 0.508879 | 7_2:-28255639 | None:intergenic |
| CGTCGAAGAGGTTTATCCTC+TGG | 0.509640 | 7_2:+28251989 | Msa1055050:CDS |
| AACTGTAAAGAGGCATAAAA+GGG | 0.511841 | 7_2:+28255829 | Msa1055050:three_prime_UTR |
| GTTGAACCTTTGGGAAAAGC+TGG | 0.516076 | 7_2:+28251725 | Msa1055050:CDS |
| AGTAAGGATATTACATGAGC+TGG | 0.516374 | 7_2:-28255646 | None:intergenic |
| CTTCACGATTCAGTATTGGT+TGG | 0.522377 | 7_2:-28248637 | None:intergenic |
| CGGCGCTGATTGGCTTCACA+TGG | 0.528220 | 7_2:+28248800 | Msa1055050:CDS |
| TTTCATATAGAGACATCAAA+AGG | 0.529704 | 7_2:+28251764 | Msa1055050:CDS |
| ATTGATCATACGATGAGCTT+CGG | 0.530878 | 7_2:-28248775 | None:intergenic |
| TAAACTTCAATATTCAACAA+AGG | 0.532744 | 7_2:-28255878 | None:intergenic |
| GATACCTCTATGTCAAGTGA+TGG | 0.543313 | 7_2:-28252454 | None:intergenic |
| CCTGGTGTATCGATAAAGCC+TGG | 0.545173 | 7_2:+28251960 | Msa1055050:CDS |
| ACTGTAGAACCAGGATTTGG+AGG | 0.545563 | 7_2:+28252262 | Msa1055050:CDS |
| ATATATTCCACTCTGAAAGA+AGG | 0.548959 | 7_2:+28248560 | None:intergenic |
| CTCAACAGAACTCCTCAGTA+AGG | 0.550791 | 7_2:-28255662 | None:intergenic |
| TTGGCTTCACATGGACATCA+TGG | 0.550882 | 7_2:+28248809 | Msa1055050:CDS |
| CATAGATGTGGCTGCATCAG+CGG | 0.553838 | 7_2:+28255576 | Msa1055050:CDS |
| AAATACAAAGACAAGTAAAG+TGG | 0.555368 | 7_2:-28255789 | None:intergenic |
| CCAGGCTTTATCGATACACC+AGG | 0.560158 | 7_2:-28251960 | None:intergenic |
| CTTGTCATGACTGTAGAACC+AGG | 0.566539 | 7_2:+28252253 | Msa1055050:CDS |
| AAGTCAGATGATAGCATCGA+AGG | 0.571145 | 7_2:-28248738 | None:intergenic |
| GTACCCATCACTTGACATAG+AGG | 0.574322 | 7_2:+28252450 | Msa1055050:CDS |
| TTGGTGAGTTGTGGTTGTTG+AGG | 0.576132 | 7_2:-28248680 | None:intergenic |
| ATGACAAGAACCATTTCCAC+AGG | 0.585136 | 7_2:-28252238 | None:intergenic |
| ATATTAAGTCACACGGCATG+AGG | 0.586950 | 7_2:+28251937 | Msa1055050:CDS |
| AATTAACAGAAACTGTAAAG+AGG | 0.587323 | 7_2:+28255819 | Msa1055050:three_prime_UTR |
| ATTATTAACTGGAGTGCTTG+TGG | 0.588858 | 7_2:+28251424 | Msa1055050:intron |
| GCAGCCACATCTATGGTTGA+AGG | 0.590322 | 7_2:-28255568 | None:intergenic |
| TCTTCCACCTTCTTTCAGAG+TGG | 0.590764 | 7_2:-28248567 | None:intergenic |
| ATATCTGGACTGTCACCTGA+TGG | 0.594881 | 7_2:+28251682 | Msa1055050:CDS |
| ATGTTGTTGTATGGTTGATG+TGG | 0.595689 | 7_2:+28255719 | Msa1055050:three_prime_UTR |
| CATGTGAAGCCAATCAGCGC+CGG | 0.605210 | 7_2:-28248799 | None:intergenic |
| ATACCTCTATGTCAAGTGAT+GGG | 0.606611 | 7_2:-28252453 | None:intergenic |
| TATTCCACTCTGAAAGAAGG+TGG | 0.607263 | 7_2:+28248563 | None:intergenic |
| AAAGGTTCAACATAATCAAG+AGG | 0.610778 | 7_2:-28251713 | None:intergenic |
| AGGGCCTTCAACCATAGATG+TGG | 0.611174 | 7_2:+28255564 | Msa1055050:CDS |
| ACCGTCTTGTCTACAAAACA+AGG | 0.624332 | 7_2:-28255933 | None:intergenic |
| GCCTGGAACATCCGTCGAAG+AGG | 0.624539 | 7_2:+28251977 | Msa1055050:CDS |
| CCGACCTGGTTGGTAACGAT+AGG | 0.640072 | 7_2:-28255994 | None:intergenic |
| TATTACATGAGCTGGTTCAG+GGG | 0.640775 | 7_2:-28255638 | None:intergenic |
| ATCCAAAATATTAAGTCACA+CGG | 0.657663 | 7_2:+28251930 | Msa1055050:CDS |
| CAGAGGATAAACCTCTTCGA+CGG | 0.663382 | 7_2:-28251988 | None:intergenic |
| CTCATGTAATATCCTTACTG+AGG | 0.666080 | 7_2:+28255650 | Msa1055050:CDS |
| GGTTGAAGCTGAAAATCCTG+TGG | 0.666343 | 7_2:+28252222 | Msa1055050:intron |
| TATGCCAGAGATGATGGACA+AGG | 0.713929 | 7_2:+28252294 | Msa1055050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATTTTCTTTAATTATTAT+CGG | - | chr7_2:28249129-28249148 | None:intergenic | 10.0% |
| !! | AAATTTATTTATTATCTAAG+TGG | + | chr7_2:28251128-28251147 | Msa1055050:intron | 10.0% |
| !! | TATCAATTAGTATTATATTT+AGG | + | chr7_2:28253760-28253779 | Msa1055050:intron | 10.0% |
| !! | ATTTAATGTTTAAATCAAAT+CGG | + | chr7_2:28253855-28253874 | Msa1055050:intron | 10.0% |
| !!! | TTTTAACTTCTTTTTTATAT+AGG | + | chr7_2:28255090-28255109 | Msa1055050:intron | 10.0% |
| !! | TAAATTCTGTTTATTTATTG+AGG | + | chr7_2:28249259-28249278 | Msa1055050:intron | 15.0% |
| !! | AAATTCTGTTTATTTATTGA+GGG | + | chr7_2:28249260-28249279 | Msa1055050:intron | 15.0% |
| !!! | TGAAAATGTTTTGTTTTATT+AGG | + | chr7_2:28249328-28249347 | Msa1055050:intron | 15.0% |
| !! | AGTTACAAAATAACTAATTA+TGG | - | chr7_2:28249803-28249822 | None:intergenic | 15.0% |
| !! | AACTTGATTCAATTAATTTA+CGG | - | chr7_2:28250333-28250352 | None:intergenic | 15.0% |
| !!! | GTAATTATAAGTTTTAAGAA+AGG | - | chr7_2:28250855-28250874 | None:intergenic | 15.0% |
| !!! | AACATTTTCAACAATTTAAT+GGG | - | chr7_2:28251452-28251471 | None:intergenic | 15.0% |
| !!! | AAACATTTTCAACAATTTAA+TGG | - | chr7_2:28251453-28251472 | None:intergenic | 15.0% |
| !! | TAAAAAAAAATACGAGAAAA+CGG | - | chr7_2:28251819-28251838 | None:intergenic | 15.0% |
| !!! | AAATATGTATTTATTTTGAC+AGG | - | chr7_2:28252510-28252529 | None:intergenic | 15.0% |
| !! | TGATACAAAATATGAATATA+CGG | - | chr7_2:28252822-28252841 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTTTTTTGGTTT+GGG | - | chr7_2:28252845-28252864 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTTTTTTTTGGTT+TGG | - | chr7_2:28252846-28252865 | None:intergenic | 15.0% |
| !!! | GGAATTAATTTTATACTAAA+TGG | + | chr7_2:28254937-28254956 | Msa1055050:intron | 15.0% |
| !! | AGACAACAACTAATTTAATA+AGG | - | chr7_2:28249238-28249257 | None:intergenic | 20.0% |
| !! | AATTCTGTTTATTTATTGAG+GGG | + | chr7_2:28249261-28249280 | Msa1055050:intron | 20.0% |
| !! | AACAATGTAAAAGCTATATA+TGG | - | chr7_2:28249597-28249616 | None:intergenic | 20.0% |
| !!! | GTTATTTTGTAACTTTTAGA+TGG | + | chr7_2:28249809-28249828 | Msa1055050:intron | 20.0% |
| !!! | TATAATGTCTAAGAGTATAT+TGG | + | chr7_2:28249855-28249874 | Msa1055050:intron | 20.0% |
| !!! | TATAATGTCTAAGAGTATAT+TGG | + | chr7_2:28249855-28249874 | Msa1055050:intron | 20.0% |
| !! | AAAAATGTGTGTGTAAAAAT+TGG | + | chr7_2:28250149-28250168 | Msa1055050:intron | 20.0% |
| !! | AATGTATTATCACAGAAAAT+TGG | + | chr7_2:28250259-28250278 | Msa1055050:intron | 20.0% |
| !!! | TAAGTTTTAAGAAAGGATAA+GGG | - | chr7_2:28250848-28250867 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTAAGAAAGGATA+AGG | - | chr7_2:28250849-28250868 | None:intergenic | 20.0% |
| !! | AAAATACTTAACTAGGTAAA+TGG | - | chr7_2:28250884-28250903 | None:intergenic | 20.0% |
| !! | ATTGATCAAAATACTTAACT+AGG | - | chr7_2:28250891-28250910 | None:intergenic | 20.0% |
| !!! | AATCTCTAGGTTATTTTATT+TGG | + | chr7_2:28251005-28251024 | Msa1055050:intron | 20.0% |
| !! | TGTTTCAAAATAGAAGAAAT+TGG | - | chr7_2:28251075-28251094 | None:intergenic | 20.0% |
| !! | CATTGAATAAGAATGAAATT+CGG | + | chr7_2:28251151-28251170 | Msa1055050:intron | 20.0% |
| !! | ATTGAATAAGAATGAAATTC+GGG | + | chr7_2:28251152-28251171 | Msa1055050:intron | 20.0% |
| !! | CTTCTAATTGATAGAAATTA+AGG | + | chr7_2:28251207-28251226 | Msa1055050:intron | 20.0% |
| !!! | AGCATTTTAATCAGTAAAAA+AGG | - | chr7_2:28251585-28251604 | None:intergenic | 20.0% |
| !!! | AAGAAAGTACTATAAAAAGT+GGG | - | chr7_2:28251860-28251879 | None:intergenic | 20.0% |
| !!! | AAAGAAAGTACTATAAAAAG+TGG | - | chr7_2:28251861-28251880 | None:intergenic | 20.0% |
| !!! | TTCTTGATAGTAATTTTTGT+TGG | + | chr7_2:28251887-28251906 | Msa1055050:intron | 20.0% |
| !!! | TTCTTAACTTTTATGTCTTT+TGG | + | chr7_2:28252329-28252348 | Msa1055050:intron | 20.0% |
| !! | AGTTTGGAAACTTAATTAAT+AGG | + | chr7_2:28252756-28252775 | Msa1055050:intron | 20.0% |
| !! | GATACAAAATATGAATATAC+GGG | - | chr7_2:28252821-28252840 | None:intergenic | 20.0% |
| !! | AATTATGTCAGTAAAAAACA+CGG | + | chr7_2:28253718-28253737 | Msa1055050:intron | 20.0% |
| !! | ACATAAACTAATAAATCATC+AGG | - | chr7_2:28253809-28253828 | None:intergenic | 20.0% |
| !! | CAAAAACTGTCTAAATAAAT+TGG | - | chr7_2:28253886-28253905 | None:intergenic | 20.0% |
| !!! | CAATTTATTTAGACAGTTTT+TGG | + | chr7_2:28253884-28253903 | Msa1055050:intron | 20.0% |
| !! | TATGCAATATTGAAAATAGA+TGG | + | chr7_2:28254810-28254829 | Msa1055050:intron | 20.0% |
| !! | ATGCAATATTGAAAATAGAT+GGG | + | chr7_2:28254811-28254830 | Msa1055050:intron | 20.0% |
| !!! | TGTAGTTTTTTTTTTTGGTT+TGG | + | chr7_2:28254872-28254891 | Msa1055050:intron | 20.0% |
| !!! | GTAGTTTTTTTTTTTGGTTT+GGG | + | chr7_2:28254873-28254892 | Msa1055050:intron | 20.0% |
| !! | TGATACAGAATATGAATATA+CGG | + | chr7_2:28254896-28254915 | Msa1055050:intron | 20.0% |
| !!! | AGTTTGGTAACTTAATTAAT+AGG | - | chr7_2:28254967-28254986 | None:intergenic | 20.0% |
| !! | AAACTTCAATATTCAACAAA+GGG | - | chr7_2:28255880-28255899 | None:intergenic | 20.0% |
| !! | TAAACTTCAATATTCAACAA+AGG | - | chr7_2:28255881-28255900 | None:intergenic | 20.0% |
| !!! | AATTTTGATCTACTAAGTTT+TGG | + | chr7_2:28255907-28255926 | Msa1055050:three_prime_UTR | 20.0% |
| ! | TCACCAAAAGAAGAAAAAAT+GGG | + | chr7_2:28248696-28248715 | Msa1055050:exon | 25.0% |
| ! | AAATTGAAAAGACTTGTAAC+TGG | + | chr7_2:28248962-28248981 | Msa1055050:intron | 25.0% |
| ! | AATTGAAAAGACTTGTAACT+GGG | + | chr7_2:28248963-28248982 | Msa1055050:intron | 25.0% |
| ! | TTTAATGTAACTACATGCAT+CGG | + | chr7_2:28249155-28249174 | Msa1055050:intron | 25.0% |
| !!! | GTTTTGTTTTATTAGGAAGA+TGG | + | chr7_2:28249335-28249354 | Msa1055050:intron | 25.0% |
| !!! | TTATCTTTGTTTTGAATCCT+CGG | + | chr7_2:28249429-28249448 | Msa1055050:intron | 25.0% |
| ! | GCTTAAAACTAAGTCAATTT+GGG | - | chr7_2:28249462-28249481 | None:intergenic | 25.0% |
| ! | AGCTTAAAACTAAGTCAATT+TGG | - | chr7_2:28249463-28249482 | None:intergenic | 25.0% |
| !! | TTTACTTGACATTGTTGATT+TGG | + | chr7_2:28249532-28249551 | Msa1055050:intron | 25.0% |
| !!! | TTACTTGACATTGTTGATTT+GGG | + | chr7_2:28249533-28249552 | Msa1055050:intron | 25.0% |
| ! | AGCTATATATGGATTTATCT+AGG | - | chr7_2:28249586-28249605 | None:intergenic | 25.0% |
| !! | TTACCTGGAGAAAAATATTT+TGG | + | chr7_2:28249715-28249734 | Msa1055050:intron | 25.0% |
| !! | TACCTGGAGAAAAATATTTT+GGG | + | chr7_2:28249716-28249735 | Msa1055050:intron | 25.0% |
| ! | AATTTGATAGATTTCTTGGA+CGG | + | chr7_2:28250038-28250057 | Msa1055050:intron | 25.0% |
| !!! | TTTAGTTGATTTGAAAACCA+AGG | + | chr7_2:28250108-28250127 | Msa1055050:intron | 25.0% |
| ! | AATCAAGTTTCTTTGCTTAA+TGG | + | chr7_2:28250344-28250363 | Msa1055050:intron | 25.0% |
| ! | CAAGGAATGTAATTATTTGA+AGG | + | chr7_2:28250409-28250428 | Msa1055050:intron | 25.0% |
| !! | GTAATTATTTGAAGGCATAT+CGG | + | chr7_2:28250417-28250436 | Msa1055050:intron | 25.0% |
| !!! | ACTTCTGAATGTTGTTTTTA+AGG | + | chr7_2:28250457-28250476 | Msa1055050:intron | 25.0% |
| !!! | CTTCTGAATGTTGTTTTTAA+GGG | + | chr7_2:28250458-28250477 | Msa1055050:intron | 25.0% |
| !!! | GTTGGACTTTTTAGTTTTTT+TGG | + | chr7_2:28250486-28250505 | Msa1055050:intron | 25.0% |
| !!! | TTTTTTGGTTGTATCTGAAA+AGG | + | chr7_2:28250501-28250520 | Msa1055050:intron | 25.0% |
| ! | AATCACAAAATTTCCTATGA+TGG | - | chr7_2:28250773-28250792 | None:intergenic | 25.0% |
| !!! | AAGTTTTAAGAAAGGATAAG+GGG | - | chr7_2:28250847-28250866 | None:intergenic | 25.0% |
| ! | ATAAAATAACCTAGAGATTG+AGG | - | chr7_2:28251004-28251023 | None:intergenic | 25.0% |
| ! | TGAATTATAGTTTACAACCT+AGG | + | chr7_2:28251040-28251059 | Msa1055050:intron | 25.0% |
| ! | TTCAAAATAGAAGAAATTGG+TGG | - | chr7_2:28251072-28251091 | None:intergenic | 25.0% |
| ! | AATTAGAAGAAAAAAGAGGA+AGG | - | chr7_2:28251481-28251500 | None:intergenic | 25.0% |
| ! | CACAAATTAGAAGAAAAAAG+AGG | - | chr7_2:28251485-28251504 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCTAATTTGTGC+AGG | + | chr7_2:28251486-28251505 | Msa1055050:intron | 25.0% |
| !! | TTTTGTCCCTAATTTAACTA+TGG | + | chr7_2:28251511-28251530 | Msa1055050:CDS | 25.0% |
| ! | TTTGTCCCTAATTTAACTAT+GGG | + | chr7_2:28251512-28251531 | Msa1055050:CDS | 25.0% |
| ! | TTTCATATAGAGACATCAAA+AGG | + | chr7_2:28251764-28251783 | Msa1055050:CDS | 25.0% |
| ! | ATCCAAAATATTAAGTCACA+CGG | + | chr7_2:28251930-28251949 | Msa1055050:CDS | 25.0% |
| !! | ATTTTACCAAAAAGGAAAAG+GGG | - | chr7_2:28252638-28252657 | None:intergenic | 25.0% |
| !! | CATTTTACCAAAAAGGAAAA+GGG | - | chr7_2:28252639-28252658 | None:intergenic | 25.0% |
| !! | TCATTTTACCAAAAAGGAAA+AGG | - | chr7_2:28252640-28252659 | None:intergenic | 25.0% |
| !!! | TTTTCCTTTTTGGTAAAATG+AGG | + | chr7_2:28252639-28252658 | Msa1055050:intron | 25.0% |
| !!! | CGGGTTTTTATTTTAAGTTT+TGG | - | chr7_2:28252802-28252821 | None:intergenic | 25.0% |
| !!! | GGCTGTAGTTTTTTTTTTTT+TGG | - | chr7_2:28252851-28252870 | None:intergenic | 25.0% |
| ! | TGCAATATTGAAAAATGGAT+GGG | - | chr7_2:28252909-28252928 | None:intergenic | 25.0% |
| ! | ATGCAATATTGAAAAATGGA+TGG | - | chr7_2:28252910-28252929 | None:intergenic | 25.0% |
| ! | TGCTATGCAATATTGAAAAA+TGG | - | chr7_2:28252914-28252933 | None:intergenic | 25.0% |
| ! | AAACAATAGATTAGATGTGA+TGG | - | chr7_2:28252940-28252959 | None:intergenic | 25.0% |
| ! | TTCAAATTCATCCAAACAAA+CGG | - | chr7_2:28253252-28253271 | None:intergenic | 25.0% |
| ! | ATTATGTCAGTAAAAAACAC+GGG | + | chr7_2:28253719-28253738 | Msa1055050:intron | 25.0% |
| ! | ATTATGTCAGTAAAATACAC+AGG | - | chr7_2:28254007-28254026 | None:intergenic | 25.0% |
| !!! | TTAGCTATGATAGGTTTTAA+AGG | + | chr7_2:28254319-28254338 | Msa1055050:intron | 25.0% |
| !!! | TAGCTATGATAGGTTTTAAA+GGG | + | chr7_2:28254320-28254339 | Msa1055050:intron | 25.0% |
| ! | GGAATAAGTTACTACAAAAA+AGG | + | chr7_2:28254694-28254713 | Msa1055050:intron | 25.0% |
| ! | TATTGAAAATAGATGGGTAA+TGG | + | chr7_2:28254817-28254836 | Msa1055050:intron | 25.0% |
| !!! | ATGGCTGTAGTTTTTTTTTT+TGG | + | chr7_2:28254867-28254886 | Msa1055050:intron | 25.0% |
| ! | GATACAGAATATGAATATAC+GGG | + | chr7_2:28254897-28254916 | Msa1055050:intron | 25.0% |
| ! | TAATTCCCCAATACAATAAT+TGG | - | chr7_2:28255146-28255165 | None:intergenic | 25.0% |
| ! | AATCTCCATGAATACAATAA+GGG | - | chr7_2:28255435-28255454 | None:intergenic | 25.0% |
| ! | TAATCTCCATGAATACAATA+AGG | - | chr7_2:28255436-28255455 | None:intergenic | 25.0% |
| ! | GCAAATGTTATTATCAATAG+TGG | - | chr7_2:28255498-28255517 | None:intergenic | 25.0% |
| ! | AAATACAAAGACAAGTAAAG+TGG | - | chr7_2:28255792-28255811 | None:intergenic | 25.0% |
| ! | AATTAACAGAAACTGTAAAG+AGG | + | chr7_2:28255819-28255838 | Msa1055050:three_prime_UTR | 25.0% |
| CTCACCAAAAGAAGAAAAAA+TGG | + | chr7_2:28248695-28248714 | Msa1055050:exon | 30.0% | |
| !!! | ACTCCCATTTTTTCTTCTTT+TGG | - | chr7_2:28248702-28248721 | None:intergenic | 30.0% |
| ! | TATGAAGCACCAACTTTAAT+TGG | + | chr7_2:28248874-28248893 | Msa1055050:intron | 30.0% |
| ! | ATGAAGCACCAACTTTAATT+GGG | + | chr7_2:28248875-28248894 | Msa1055050:intron | 30.0% |
| TAAAACTAAGTCAATTTGGG+TGG | - | chr7_2:28249459-28249478 | None:intergenic | 30.0% | |
| GAAATCAAGTAACACACAAA+GGG | - | chr7_2:28249501-28249520 | None:intergenic | 30.0% | |
| AGAAATCAAGTAACACACAA+AGG | - | chr7_2:28249502-28249521 | None:intergenic | 30.0% | |
| !! | TTCGTTTTTCTCCACTTAAA+CGG | - | chr7_2:28249687-28249706 | None:intergenic | 30.0% |
| ! | TTCCCAAAATATTTTTCTCC+AGG | - | chr7_2:28249721-28249740 | None:intergenic | 30.0% |
| ATAGAAACACGTTGACAAAA+GGG | - | chr7_2:28249756-28249775 | None:intergenic | 30.0% | |
| TATAGAAACACGTTGACAAA+AGG | - | chr7_2:28249757-28249776 | None:intergenic | 30.0% | |
| GCTCAATTTGATAGATTTCT+TGG | + | chr7_2:28250034-28250053 | Msa1055050:intron | 30.0% | |
| ATTTGATAGATTTCTTGGAC+GGG | + | chr7_2:28250039-28250058 | Msa1055050:intron | 30.0% | |
| ! | TTGATTTGAAAACCAAGGAA+TGG | + | chr7_2:28250113-28250132 | Msa1055050:intron | 30.0% |
| TGATTTGAAAACCAAGGAAT+GGG | + | chr7_2:28250114-28250133 | Msa1055050:intron | 30.0% | |
| ATGTGTGTGTAAAAATTGGT+TGG | + | chr7_2:28250153-28250172 | Msa1055050:intron | 30.0% | |
| CAAAAAAATCCAATACCAAC+AGG | - | chr7_2:28250285-28250304 | None:intergenic | 30.0% | |
| !!! | CTGTTGGTATTGGATTTTTT+TGG | + | chr7_2:28250283-28250302 | Msa1055050:intron | 30.0% |
| GTGTTGTGTTAGACTTATTA+TGG | + | chr7_2:28250366-28250385 | Msa1055050:intron | 30.0% | |
| !! | TATCGGTGTTATTAATCACA+AGG | + | chr7_2:28250434-28250453 | Msa1055050:intron | 30.0% |
| !!! | TTGTTTTTAAGGGATTGTGT+TGG | + | chr7_2:28250468-28250487 | Msa1055050:intron | 30.0% |
| ! | ATCTGAAAAGGATTCTGAAA+AGG | + | chr7_2:28250513-28250532 | Msa1055050:intron | 30.0% |
| CAAAATCAAGTTCTTAGTGA+AGG | + | chr7_2:28250638-28250657 | Msa1055050:intron | 30.0% | |
| TTCATTTCTAATCAGTGATG+TGG | + | chr7_2:28250672-28250691 | Msa1055050:intron | 30.0% | |
| AGCTGCATAGATAAAAATCA+AGG | - | chr7_2:28250729-28250748 | None:intergenic | 30.0% | |
| ! | GATTTTTATCTATGCAGCTT+TGG | + | chr7_2:28250730-28250749 | Msa1055050:intron | 30.0% |
| ATTGAGGATATAGAGTTACT+AGG | - | chr7_2:28250988-28251007 | None:intergenic | 30.0% | |
| AAATAGAAGAAATTGGTGGA+TGG | - | chr7_2:28251068-28251087 | None:intergenic | 30.0% | |
| GAAGTTATGATGAATACCAA+AGG | + | chr7_2:28251272-28251291 | Msa1055050:intron | 30.0% | |
| ATTTGTTCATGAACATGAGT+TGG | + | chr7_2:28251341-28251360 | Msa1055050:intron | 30.0% | |
| TAAACAAATTTAACACCGCA+AGG | - | chr7_2:28251390-28251409 | None:intergenic | 30.0% | |
| TTTCTCAAGCTTTCAATGAT+TGG | - | chr7_2:28251542-28251561 | None:intergenic | 30.0% | |
| !!! | CATAATTTTTTCCTCGCTAT+TGG | + | chr7_2:28251611-28251630 | Msa1055050:intron | 30.0% |
| AAAGGTTCAACATAATCAAG+AGG | - | chr7_2:28251716-28251735 | None:intergenic | 30.0% | |
| TCTTGATTATGTTGAACCTT+TGG | + | chr7_2:28251715-28251734 | Msa1055050:CDS | 30.0% | |
| CTTGATTATGTTGAACCTTT+GGG | + | chr7_2:28251716-28251735 | Msa1055050:CDS | 30.0% | |
| ATATAGAGACATCAAAAGGT+TGG | + | chr7_2:28251768-28251787 | Msa1055050:intron | 30.0% | |
| ! | GTAATCTAAGTGTTTTTCAC+AGG | + | chr7_2:28252201-28252220 | Msa1055050:intron | 30.0% |
| AAAATTTATGCCAGAGATGA+TGG | + | chr7_2:28252288-28252307 | Msa1055050:CDS | 30.0% | |
| AAGATACAACCAAGACAATT+GGG | - | chr7_2:28252485-28252504 | None:intergenic | 30.0% | |
| AAAGATACAACCAAGACAAT+TGG | - | chr7_2:28252486-28252505 | None:intergenic | 30.0% | |
| ! | TTGAGAGAATTTTGTGACTA+TGG | - | chr7_2:28252544-28252563 | None:intergenic | 30.0% |
| ! | TTTGCCTCATTTTACCAAAA+AGG | - | chr7_2:28252646-28252665 | None:intergenic | 30.0% |
| ATTGAAAAATGGATGGGTAA+TGG | - | chr7_2:28252903-28252922 | None:intergenic | 30.0% | |
| !!! | TAGCCATGATAGGTTTTAAA+GGG | - | chr7_2:28253408-28253427 | None:intergenic | 30.0% |
| !! | TTAGCCATGATAGGTTTTAA+AGG | - | chr7_2:28253409-28253428 | None:intergenic | 30.0% |
| AACATGATAGGATGAGAAAA+AGG | + | chr7_2:28253684-28253703 | Msa1055050:intron | 30.0% | |
| CAGTAAAATACACAGGTTTA+GGG | - | chr7_2:28254000-28254019 | None:intergenic | 30.0% | |
| TCAGTAAAATACACAGGTTT+AGG | - | chr7_2:28254001-28254020 | None:intergenic | 30.0% | |
| AACATGATAGGATGAGAAAA+GGG | - | chr7_2:28253684-28253703 | None:intergenic | 30.0% | |
| !!! | AGCTATGATAGGTTTTAAAG+GGG | + | chr7_2:28254321-28254340 | Msa1055050:intron | 30.0% |
| CTACACAAAGTCTAAACAAA+AGG | - | chr7_2:28254512-28254531 | None:intergenic | 30.0% | |
| AAACAATAGATGAGATGTGA+TGG | + | chr7_2:28254781-28254800 | Msa1055050:intron | 30.0% | |
| ! | CGGGTTTCTATTTTATGTTT+TGG | + | chr7_2:28254916-28254935 | Msa1055050:intron | 30.0% |
| TATGGGACCAATTATTGTAT+TGG | + | chr7_2:28255136-28255155 | Msa1055050:intron | 30.0% | |
| ATGGGACCAATTATTGTATT+GGG | + | chr7_2:28255137-28255156 | Msa1055050:intron | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr7_2:28255211-28255230 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr7_2:28255212-28255231 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr7_2:28255240-28255259 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr7_2:28255360-28255379 | Msa1055050:intron | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr7_2:28255361-28255380 | Msa1055050:intron | 30.0% | |
| AATTCCCCTTATTGTATTCA+TGG | + | chr7_2:28255427-28255446 | Msa1055050:intron | 30.0% | |
| ATCTCCATGAATACAATAAG+GGG | - | chr7_2:28255434-28255453 | None:intergenic | 30.0% | |
| ! | AATCAAAATTGGGCATGTTT+TGG | - | chr7_2:28255526-28255545 | None:intergenic | 30.0% |
| ATCAACCTGCAATCAAAATT+GGG | - | chr7_2:28255536-28255555 | None:intergenic | 30.0% | |
| !!! | AATTTTGATTGCAGGTTGAT+GGG | + | chr7_2:28255536-28255555 | Msa1055050:intron | 30.0% |
| CCATACAACAACATCAATAA+TGG | - | chr7_2:28255713-28255732 | None:intergenic | 30.0% | |
| CCATTATTGATGTTGTTGTA+TGG | + | chr7_2:28255710-28255729 | Msa1055050:three_prime_UTR | 30.0% | |
| ! | AAACTGTAAAGAGGCATAAA+AGG | + | chr7_2:28255828-28255847 | Msa1055050:three_prime_UTR | 30.0% |
| ! | AACTGTAAAGAGGCATAAAA+GGG | + | chr7_2:28255829-28255848 | Msa1055050:three_prime_UTR | 30.0% |
| GTTTCTTCACGATTCAGTAT+TGG | - | chr7_2:28248644-28248663 | None:intergenic | 35.0% | |
| ! | TTTCTTCTTTTGGTGAGTTG+TGG | - | chr7_2:28248692-28248711 | None:intergenic | 35.0% |
| ATCATCTGACTTCGCTAATT+TGG | + | chr7_2:28248749-28248768 | Msa1055050:CDS | 35.0% | |
| ATTGATCATACGATGAGCTT+CGG | - | chr7_2:28248778-28248797 | None:intergenic | 35.0% | |
| ACAAAAATGTCTGCAGAAGT+AGG | + | chr7_2:28248987-28249006 | Msa1055050:intron | 35.0% | |
| CAAAAATGTCTGCAGAAGTA+GGG | + | chr7_2:28248988-28249007 | Msa1055050:intron | 35.0% | |
| CTGCGTGTAATCATGTTATA+AGG | - | chr7_2:28249051-28249070 | None:intergenic | 35.0% | |
| !! | TTTTGTTTAACGACGAAGCA+AGG | + | chr7_2:28249086-28249105 | Msa1055050:intron | 35.0% |
| ! | TTTTGCTTCATTTGCAGGAT+GGG | + | chr7_2:28249374-28249393 | Msa1055050:intron | 35.0% |
| TGTACTATTCTGATGAGAGA+CGG | + | chr7_2:28249616-28249635 | Msa1055050:intron | 35.0% | |
| AGAGTATATTGGATGAGTGA+TGG | + | chr7_2:28249866-28249885 | Msa1055050:intron | 35.0% | |
| ! | CTCGATCTGTAACTTTTAGA+TGG | + | chr7_2:28249903-28249922 | Msa1055050:intron | 35.0% |
| AGAGTATATTGGATGAGTGA+TGG | + | chr7_2:28249866-28249885 | Msa1055050:intron | 35.0% | |
| TTAATCTCGATCTGTAGCAA+CGG | + | chr7_2:28249992-28250011 | Msa1055050:intron | 35.0% | |
| TTTGATAGATTTCTTGGACG+GGG | + | chr7_2:28250040-28250059 | Msa1055050:intron | 35.0% | |
| TTTAATACATGCCCATTCCT+TGG | - | chr7_2:28250128-28250147 | None:intergenic | 35.0% | |
| ! | TGGTTGGTTAGATTAAGTTG+CGG | + | chr7_2:28250169-28250188 | Msa1055050:intron | 35.0% |
| TATACTAGATGTGCACAAGT+GGG | - | chr7_2:28250559-28250578 | None:intergenic | 35.0% | |
| ATATACTAGATGTGCACAAG+TGG | - | chr7_2:28250560-28250579 | None:intergenic | 35.0% | |
| ! | ATCTATGCAGCTTTGGTTAA+TGG | + | chr7_2:28250737-28250756 | Msa1055050:intron | 35.0% |
| TGGTGCTTATAAACCATCAT+AGG | + | chr7_2:28250757-28250776 | Msa1055050:intron | 35.0% | |
| TAAAGTGACTAGCATTCTTC+AGG | + | chr7_2:28250804-28250823 | Msa1055050:intron | 35.0% | |
| ATATGACAGAGGAATGAATG+TGG | - | chr7_2:28250915-28250934 | None:intergenic | 35.0% | |
| TACTAGCATGTATATGACAG+AGG | - | chr7_2:28250926-28250945 | None:intergenic | 35.0% | |
| !!! | TGTTTTTAGCATTAAGCGTG+TGG | + | chr7_2:28250956-28250975 | Msa1055050:intron | 35.0% |
| ACTCTATATCCTCAATCTCT+AGG | + | chr7_2:28250992-28251011 | Msa1055050:intron | 35.0% | |
| TCTTGCACTGTATTGAAACT+AGG | + | chr7_2:28251103-28251122 | Msa1055050:intron | 35.0% | |
| TTCACAAACAGAAGCTTGAA+AGG | - | chr7_2:28251255-28251274 | None:intergenic | 35.0% | |
| GAAACAAAGGCTAAAACCTT+TGG | - | chr7_2:28251291-28251310 | None:intergenic | 35.0% | |
| ! | CATAACTAGCACTGAAACAA+AGG | - | chr7_2:28251304-28251323 | None:intergenic | 35.0% |
| GATAATCTGGATTTACCTTG+CGG | + | chr7_2:28251372-28251391 | Msa1055050:intron | 35.0% | |
| ! | ATTATTAACTGGAGTGCTTG+TGG | + | chr7_2:28251424-28251443 | Msa1055050:intron | 35.0% |
| TAATAGTGATCAACCATTGC+AGG | + | chr7_2:28251657-28251676 | Msa1055050:intron | 35.0% | |
| AATAGTGATCAACCATTGCA+GGG | + | chr7_2:28251658-28251677 | Msa1055050:intron | 35.0% | |
| ! | AATTTTTGTTGGCAGACAAC+TGG | + | chr7_2:28251898-28251917 | Msa1055050:intron | 35.0% |
| ! | TGCCGTGTGACTTAATATTT+TGG | - | chr7_2:28251935-28251954 | None:intergenic | 35.0% |
| CACAAAAGACTCAAGATACT+CGG | - | chr7_2:28252094-28252113 | None:intergenic | 35.0% | |
| ATTACAACCACACACACAAA+GGG | - | chr7_2:28252186-28252205 | None:intergenic | 35.0% | |
| ! | AATTTTTGTCCTCCAAATCC+TGG | - | chr7_2:28252274-28252293 | None:intergenic | 35.0% |
| ATACCTCTATGTCAAGTGAT+GGG | - | chr7_2:28252456-28252475 | None:intergenic | 35.0% | |
| ! | CAAATTCCCCTTTTCCTTTT+TGG | + | chr7_2:28252629-28252648 | Msa1055050:intron | 35.0% |
| AAGGATGTGAGTGATAAATC+TGG | - | chr7_2:28253048-28253067 | None:intergenic | 35.0% | |
| CATGGGAATGGTGTTTATAA+CGG | - | chr7_2:28254537-28254556 | None:intergenic | 35.0% | |
| GGAAAATTGTTCCGTTTGTT+TGG | + | chr7_2:28253238-28253257 | Msa1055050:intron | 35.0% | |
| !! | ATCCCCTTTAAAACCTATCA+TGG | + | chr7_2:28253402-28253421 | Msa1055050:intron | 35.0% |
| !!! | AGCCATGATAGGTTTTAAAG+GGG | - | chr7_2:28253407-28253426 | None:intergenic | 35.0% |
| ! | TGGATTTTGTTAGCCATGAT+AGG | - | chr7_2:28253418-28253437 | None:intergenic | 35.0% |
| !! | TTCTCATCATCGTTTTGGTA+AGG | - | chr7_2:28254261-28254280 | None:intergenic | 35.0% |
| GATGATGAGAATCGTGTTAA+CGG | + | chr7_2:28253475-28253494 | Msa1055050:intron | 35.0% | |
| ATTCAACCTTGACTTCTCTA+GGG | - | chr7_2:28253627-28253646 | None:intergenic | 35.0% | |
| TCAGTAAAAAACACGGGTTT+AGG | + | chr7_2:28253725-28253744 | Msa1055050:intron | 35.0% | |
| CAGTAAAAAACACGGGTTTA+GGG | + | chr7_2:28253726-28253745 | Msa1055050:intron | 35.0% | |
| GAACATGATAGGATGAGAAA+AGG | - | chr7_2:28253683-28253702 | None:intergenic | 35.0% | |
| ! | AATCACATCGGCTGAAAATA+AGG | + | chr7_2:28254072-28254091 | Msa1055050:intron | 35.0% |
| TACTGAAATGAATAAGAGCG+TGG | + | chr7_2:28254216-28254235 | Msa1055050:intron | 35.0% | |
| ! | ACTGAAATGAATAAGAGCGT+GGG | + | chr7_2:28254217-28254236 | Msa1055050:intron | 35.0% |
| GATGATGAGAATCGTGTTAA+CGG | - | chr7_2:28253475-28253494 | None:intergenic | 35.0% | |
| !! | TTCTCATCATCGTTTTGGTA+AGG | + | chr7_2:28254261-28254280 | Msa1055050:intron | 35.0% |
| CGGATTCTATTAGCTATGAT+AGG | + | chr7_2:28254310-28254329 | Msa1055050:intron | 35.0% | |
| AGACTTTGTGTAGATGAACA+TGG | + | chr7_2:28254519-28254538 | Msa1055050:intron | 35.0% | |
| GACTTTGTGTAGATGAACAT+GGG | + | chr7_2:28254520-28254539 | Msa1055050:intron | 35.0% | |
| GCAGGTATAAGTGATAAATC+TGG | + | chr7_2:28254673-28254692 | Msa1055050:intron | 35.0% | |
| ACCAAGACTTACCTTTCTAT+GGG | + | chr7_2:28255119-28255138 | Msa1055050:intron | 35.0% | |
| CAATAATTGGTCCCATAGAA+AGG | - | chr7_2:28255133-28255152 | None:intergenic | 35.0% | |
| TGGGACCAATTATTGTATTG+GGG | + | chr7_2:28255138-28255157 | Msa1055050:intron | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr7_2:28255241-28255260 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr7_2:28255255-28255274 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | - | chr7_2:28255304-28255323 | None:intergenic | 35.0% | |
| CATCAACCTGCAATCAAAAT+TGG | - | chr7_2:28255537-28255556 | None:intergenic | 35.0% | |
| !!! | CAATTTTGATTGCAGGTTGA+TGG | + | chr7_2:28255535-28255554 | Msa1055050:intron | 35.0% |
| !!! | ATTTTGATTGCAGGTTGATG+GGG | + | chr7_2:28255537-28255556 | Msa1055050:intron | 35.0% |
| ! | ATATTACATGAGCTGGTTCA+GGG | - | chr7_2:28255642-28255661 | None:intergenic | 35.0% |
| AGTAAGGATATTACATGAGC+TGG | - | chr7_2:28255649-28255668 | None:intergenic | 35.0% | |
| CTCATGTAATATCCTTACTG+AGG | + | chr7_2:28255650-28255669 | Msa1055050:CDS | 35.0% | |
| ! | ATGTTGTTGTATGGTTGATG+TGG | + | chr7_2:28255719-28255738 | Msa1055050:three_prime_UTR | 35.0% |
| CAATATTCAACAAAGGGCTT+AGG | - | chr7_2:28255874-28255893 | None:intergenic | 35.0% | |
| !!! | ACCTTGTTTTGTAGACAAGA+CGG | + | chr7_2:28255932-28255951 | Msa1055050:three_prime_UTR | 35.0% |
| !! | CTTCACGATTCAGTATTGGT+TGG | - | chr7_2:28248640-28248659 | None:intergenic | 40.0% |
| !! | AGCATCGAAGGAGCTATTTT+CGG | - | chr7_2:28248729-28248748 | None:intergenic | 40.0% |
| ! | AAGTCAGATGATAGCATCGA+AGG | - | chr7_2:28248741-28248760 | None:intergenic | 40.0% |
| GCTCATCGTATGATCAATTC+CGG | + | chr7_2:28248780-28248799 | Msa1055050:CDS | 40.0% | |
| CCAGCAATCCCAATTAAAGT+TGG | - | chr7_2:28248886-28248905 | None:intergenic | 40.0% | |
| CCAACTTTAATTGGGATTGC+TGG | + | chr7_2:28248883-28248902 | Msa1055050:intron | 40.0% | |
| CCGTGATTCAATACAACAGA+GGG | - | chr7_2:28249024-28249043 | None:intergenic | 40.0% | |
| CCCTCTGTTGTATTGAATCA+CGG | + | chr7_2:28249021-28249040 | Msa1055050:intron | 40.0% | |
| ACCGTGATTCAATACAACAG+AGG | - | chr7_2:28249025-28249044 | None:intergenic | 40.0% | |
| ! | TCTCGTTTTGCTTCATTTGC+AGG | + | chr7_2:28249369-28249388 | Msa1055050:intron | 40.0% |
| ! | GTTTTGCTTCATTTGCAGGA+TGG | + | chr7_2:28249373-28249392 | Msa1055050:intron | 40.0% |
| TGAACTTTGAGCCGTTTAAG+TGG | + | chr7_2:28249673-28249692 | Msa1055050:intron | 40.0% | |
| ! | AAACGAAGTGTCTCTTTACC+TGG | + | chr7_2:28249700-28249719 | Msa1055050:intron | 40.0% |
| !! | CGGTGTCTGTTTTGAACATT+TGG | + | chr7_2:28250012-28250031 | Msa1055050:intron | 40.0% |
| TTGATAGATTTCTTGGACGG+GGG | + | chr7_2:28250041-28250060 | Msa1055050:intron | 40.0% | |
| ! | GTTAGATTAAGTTGCGGTCA+TGG | + | chr7_2:28250175-28250194 | Msa1055050:intron | 40.0% |
| !! | GTGAACAGTTCTAGAATCCT+CGG | + | chr7_2:28250217-28250236 | Msa1055050:intron | 40.0% |
| !! | TGAACAGTTCTAGAATCCTC+GGG | + | chr7_2:28250218-28250237 | Msa1055050:intron | 40.0% |
| ! | ATCACAGAAAATTGGCCTGT+TGG | + | chr7_2:28250267-28250286 | Msa1055050:intron | 40.0% |
| ! | GAAAATTGGCCTGTTGGTAT+TGG | + | chr7_2:28250273-28250292 | Msa1055050:intron | 40.0% |
| ! | TATGGCAGTGTGCTTACTTT+TGG | + | chr7_2:28250384-28250403 | Msa1055050:intron | 40.0% |
| !!! | GTGTGCTTACTTTTGGAACA+AGG | + | chr7_2:28250391-28250410 | Msa1055050:intron | 40.0% |
| TGAAAGGTAAATACTGCTGC+TGG | - | chr7_2:28251239-28251258 | None:intergenic | 40.0% | |
| CTAGTTATGCTCAGATGTGA+AGG | + | chr7_2:28251315-28251334 | Msa1055050:intron | 40.0% | |
| AGGTAAATCCAGATTATCCC+TGG | - | chr7_2:28251370-28251389 | None:intergenic | 40.0% | |
| GAGCGCCCATAGTTAAATTA+GGG | - | chr7_2:28251520-28251539 | None:intergenic | 40.0% | |
| CATATATCATGCCAATAGCG+AGG | - | chr7_2:28251625-28251644 | None:intergenic | 40.0% | |
| CTCGCTATTGGCATGATATA+TGG | + | chr7_2:28251623-28251642 | Msa1055050:intron | 40.0% | |
| CAAGAGGATTTGTAACCATC+AGG | - | chr7_2:28251700-28251719 | None:intergenic | 40.0% | |
| ATATTAAGTCACACGGCATG+AGG | + | chr7_2:28251937-28251956 | Msa1055050:CDS | 40.0% | |
| GATTACAACCACACACACAA+AGG | - | chr7_2:28252187-28252206 | None:intergenic | 40.0% | |
| AGCTGAAAATCCTGTGGAAA+TGG | + | chr7_2:28252228-28252247 | Msa1055050:CDS | 40.0% | |
| ATGACAAGAACCATTTCCAC+AGG | - | chr7_2:28252241-28252260 | None:intergenic | 40.0% | |
| ATGACTGTAGAACCAGGATT+TGG | + | chr7_2:28252259-28252278 | Msa1055050:CDS | 40.0% | |
| AATACCTTGTCCATCATCTC+TGG | - | chr7_2:28252301-28252320 | None:intergenic | 40.0% | |
| ! | TTTTTCGCCCTTTTCAAACC+AGG | + | chr7_2:28252408-28252427 | Msa1055050:intron | 40.0% |
| GGTACTTCTTCCTTAGTATC+CGG | - | chr7_2:28252435-28252454 | None:intergenic | 40.0% | |
| GATACCTCTATGTCAAGTGA+TGG | - | chr7_2:28252457-28252476 | None:intergenic | 40.0% | |
| TATCTCTCTCCCAATTGTCT+TGG | + | chr7_2:28252473-28252492 | Msa1055050:intron | 40.0% | |
| TTTGTGGTACTTTCGCGAAT+TGG | + | chr7_2:28252600-28252619 | Msa1055050:intron | 40.0% | |
| GAGGCTCGAGATAATAAGTT+TGG | + | chr7_2:28252740-28252759 | Msa1055050:intron | 40.0% | |
| ! | TGGGTAATGGTTGTATGTAG+CGG | - | chr7_2:28254830-28254849 | None:intergenic | 40.0% |
| TCCTAATCAACAGTAGTGGT+GGG | + | chr7_2:28253131-28253150 | Msa1055050:intron | 40.0% | |
| !! | AACGGACTTTTCTAAGTCCT+TGG | - | chr7_2:28253174-28253193 | None:intergenic | 40.0% |
| GACTTTGCGTAGATGAACAT+GGG | - | chr7_2:28253209-28253228 | None:intergenic | 40.0% | |
| AGACTTTGCGTAGATGAACA+TGG | - | chr7_2:28253210-28253229 | None:intergenic | 40.0% | |
| CTACGCAAAGTCTAAACAAG+AGG | + | chr7_2:28253217-28253236 | Msa1055050:intron | 40.0% | |
| ! | ATATGGTCATGATGGAAGGA+GGG | - | chr7_2:28253442-28253461 | None:intergenic | 40.0% |
| !! | CATCGTTTTGGTAAGGCATA+TGG | - | chr7_2:28254268-28254287 | None:intergenic | 40.0% |
| ! | CACGATTCTCATCATCGTTT+TGG | - | chr7_2:28254256-28254275 | None:intergenic | 40.0% |
| TCCCACGCTCTTATTCATTT+CGG | + | chr7_2:28253505-28253524 | Msa1055050:intron | 40.0% | |
| ! | ACCGAAATGAATAAGAGCGT+GGG | - | chr7_2:28253509-28253528 | None:intergenic | 40.0% |
| ! | TATACCCATTGTGGTCTTAG+AGG | + | chr7_2:28253567-28253586 | Msa1055050:intron | 40.0% |
| CATTCAACCTTGACTTCTCT+AGG | - | chr7_2:28253628-28253647 | None:intergenic | 40.0% | |
| ! | GATCACATCGGCTGAAAATA+AGG | - | chr7_2:28253654-28253673 | None:intergenic | 40.0% |
| TTCTGGATCAGGAACATGAT+AGG | - | chr7_2:28254054-28254073 | None:intergenic | 40.0% | |
| TTCCTGATCCAGAATCACAT+CGG | + | chr7_2:28254060-28254079 | Msa1055050:intron | 40.0% | |
| ! | ATTTTCAGCCGATGTGATTC+TGG | - | chr7_2:28254071-28254090 | None:intergenic | 40.0% |
| AATAAGGAGACCTTCATCCT+TGG | + | chr7_2:28254088-28254107 | Msa1055050:intron | 40.0% | |
| ! | CACGATTCTCATCATCGTTT+TGG | + | chr7_2:28254256-28254275 | Msa1055050:intron | 40.0% |
| !! | CATCGTTTTGGTAAGGCATA+TGG | + | chr7_2:28254268-28254287 | Msa1055050:intron | 40.0% |
| GTAAGGCATATGGTCATGAT+TGG | + | chr7_2:28254278-28254297 | Msa1055050:intron | 40.0% | |
| ATATGGTCATGATTGGAAGG+AGG | + | chr7_2:28254285-28254304 | Msa1055050:intron | 40.0% | |
| TATGGTCATGATTGGAAGGA+GGG | + | chr7_2:28254286-28254305 | Msa1055050:intron | 40.0% | |
| CAAAGACATGAGCGACAAAT+AGG | + | chr7_2:28254364-28254383 | Msa1055050:intron | 40.0% | |
| ! | ATCTCGTTTGCATTGACACA+TGG | - | chr7_2:28254411-28254430 | None:intergenic | 40.0% |
| TGTGTAGATGAACATGGGAA+TGG | + | chr7_2:28254525-28254544 | Msa1055050:intron | 40.0% | |
| TCTCACTTCCAACAATGATG+TGG | - | chr7_2:28254623-28254642 | None:intergenic | 40.0% | |
| TGTTGGAAGTGAGAAATCTC+CGG | + | chr7_2:28254629-28254648 | Msa1055050:intron | 40.0% | |
| GTAATGGTTGTATGTAGCAG+TGG | + | chr7_2:28254833-28254852 | Msa1055050:intron | 40.0% | |
| ! | AGCAGTGGTTGCTTTGTTAA+TGG | + | chr7_2:28254848-28254867 | Msa1055050:intron | 40.0% |
| GAAGGACGAGATCATAAGTT+TGG | - | chr7_2:28254983-28255002 | None:intergenic | 40.0% | |
| GACCAAGACTTACCTTTCTA+TGG | + | chr7_2:28255118-28255137 | Msa1055050:intron | 40.0% | |
| TCCCATAGAAAGGTAAGTCT+TGG | - | chr7_2:28255123-28255142 | None:intergenic | 40.0% | |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr7_2:28255164-28255183 | Msa1055050:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr7_2:28255165-28255184 | Msa1055050:intron | 40.0% |
| GACTAACGAAGTCTACATTC+AGG | - | chr7_2:28255305-28255324 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr7_2:28255165-28255184 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr7_2:28255164-28255183 | None:intergenic | 40.0% |
| GATTATGAACTGCTTGTGTC+AGG | + | chr7_2:28255451-28255470 | Msa1055050:intron | 40.0% | |
| !!! | ACATGCCCAATTTTGATTGC+AGG | + | chr7_2:28255528-28255547 | Msa1055050:intron | 40.0% |
| !!! | TTTTGATTGCAGGTTGATGG+GGG | + | chr7_2:28255538-28255557 | Msa1055050:intron | 40.0% |
| ! | TATTACATGAGCTGGTTCAG+GGG | - | chr7_2:28255641-28255660 | None:intergenic | 40.0% |
| ! | GATATTACATGAGCTGGTTC+AGG | - | chr7_2:28255643-28255662 | None:intergenic | 40.0% |
| ACCGTCTTGTCTACAAAACA+AGG | - | chr7_2:28255936-28255955 | None:intergenic | 40.0% | |
| TCTTCCACCTTCTTTCAGAG+TGG | - | chr7_2:28248570-28248589 | None:intergenic | 45.0% | |
| !! | TGGTTGGTTGTAGCTGCTTT+TGG | - | chr7_2:28248624-28248643 | None:intergenic | 45.0% |
| TTGGTGAGTTGTGGTTGTTG+AGG | - | chr7_2:28248683-28248702 | None:intergenic | 45.0% | |
| TTGGCTTCACATGGACATCA+TGG | + | chr7_2:28248809-28248828 | Msa1055050:CDS | 45.0% | |
| CTTCATTTGCAGGATGGGTA+AGG | + | chr7_2:28249379-28249398 | Msa1055050:intron | 45.0% | |
| ! | TGGGTAAGGTGTCAATGTCT+TGG | + | chr7_2:28249393-28249412 | Msa1055050:intron | 45.0% |
| ! | ACGTTGACAAAAGGGTGTGT+AGG | - | chr7_2:28249748-28249767 | None:intergenic | 45.0% |
| TGATAGATTTCTTGGACGGG+GGG | + | chr7_2:28250042-28250061 | Msa1055050:intron | 45.0% | |
| GTGACAAACGTAAAACCGTG+TGG | + | chr7_2:28250075-28250094 | Msa1055050:intron | 45.0% | |
| CTAAATGCAAGCGAACCACA+CGG | - | chr7_2:28250093-28250112 | None:intergenic | 45.0% | |
| TGCGGTCATGGAAAATTGTG+TGG | + | chr7_2:28250187-28250206 | Msa1055050:intron | 45.0% | |
| ATAAGGGGAAAACGTTCAGC+CGG | - | chr7_2:28250832-28250851 | None:intergenic | 45.0% | |
| TAGCATTAAGCGTGTGGTAG+AGG | + | chr7_2:28250962-28250981 | Msa1055050:intron | 45.0% | |
| ! | GAAATTGGTGGATGGATCCT+AGG | - | chr7_2:28251060-28251079 | None:intergenic | 45.0% |
| !! | ATGAACATGAGTTGGTTGCC+AGG | + | chr7_2:28251349-28251368 | Msa1055050:intron | 45.0% |
| !! | TGAACATGAGTTGGTTGCCA+GGG | + | chr7_2:28251350-28251369 | Msa1055050:intron | 45.0% |
| ! | GGAGCGCCCATAGTTAAATT+AGG | - | chr7_2:28251521-28251540 | None:intergenic | 45.0% |
| ATATCTGGACTGTCACCTGA+TGG | + | chr7_2:28251682-28251701 | Msa1055050:CDS | 45.0% | |
| ! | GTTGAACCTTTGGGAAAAGC+TGG | + | chr7_2:28251725-28251744 | Msa1055050:CDS | 45.0% |
| CGAGAAAACGGACAACATGA+AGG | - | chr7_2:28251807-28251826 | None:intergenic | 45.0% | |
| CAGAGGATAAACCTCTTCGA+CGG | - | chr7_2:28251991-28252010 | None:intergenic | 45.0% | |
| TGACCAGATGAGAACAAGAG+CGG | - | chr7_2:28252027-28252046 | None:intergenic | 45.0% | |
| ACCACACACACAAAGGGAAT+GGG | - | chr7_2:28252180-28252199 | None:intergenic | 45.0% | |
| AACCACACACACAAAGGGAA+TGG | - | chr7_2:28252181-28252200 | None:intergenic | 45.0% | |
| GGTTGAAGCTGAAAATCCTG+TGG | + | chr7_2:28252222-28252241 | Msa1055050:intron | 45.0% | |
| CTTGTCATGACTGTAGAACC+AGG | + | chr7_2:28252253-28252272 | Msa1055050:CDS | 45.0% | |
| ACTGTAGAACCAGGATTTGG+AGG | + | chr7_2:28252262-28252281 | Msa1055050:CDS | 45.0% | |
| !! | TATGCCAGAGATGATGGACA+AGG | + | chr7_2:28252294-28252313 | Msa1055050:CDS | 45.0% |
| ! | ATCCGGACCTGGTTTGAAAA+GGG | - | chr7_2:28252418-28252437 | None:intergenic | 45.0% |
| ! | TATCCGGACCTGGTTTGAAA+AGG | - | chr7_2:28252419-28252438 | None:intergenic | 45.0% |
| GTACCCATCACTTGACATAG+AGG | + | chr7_2:28252450-28252469 | Msa1055050:CDS | 45.0% | |
| ACAAGATGCGAACTGCGAAT+TGG | + | chr7_2:28252563-28252582 | Msa1055050:intron | 45.0% | |
| GCGAATTGGTACTTGTGTAC+CGG | + | chr7_2:28252577-28252596 | Msa1055050:intron | 45.0% | |
| !! | TTCGCGAAAGTACCACAAAC+CGG | - | chr7_2:28252599-28252618 | None:intergenic | 45.0% |
| ! | AGCGGTGGTTGCTTTGTTAA+TGG | - | chr7_2:28252872-28252891 | None:intergenic | 45.0% |
| GTAATGGTTGTATGTAGCGG+TGG | - | chr7_2:28252887-28252906 | None:intergenic | 45.0% | |
| ACTCATGATAGCAGTGCTAC+TGG | + | chr7_2:28252983-28253002 | Msa1055050:intron | 45.0% | |
| TGCTGGAAGTGAGAAATCTC+CGG | - | chr7_2:28253100-28253119 | None:intergenic | 45.0% | |
| TCTCACTTCCAGCAATGATG+TGG | + | chr7_2:28253106-28253125 | Msa1055050:intron | 45.0% | |
| TTAGGACTCCACATCATTGC+TGG | - | chr7_2:28253117-28253136 | None:intergenic | 45.0% | |
| GGAGTCCTAATCAACAGTAG+TGG | + | chr7_2:28253127-28253146 | Msa1055050:intron | 45.0% | |
| GTCCTAATCAACAGTAGTGG+TGG | + | chr7_2:28253130-28253149 | Msa1055050:intron | 45.0% | |
| CCTAATCAACAGTAGTGGTG+GGG | + | chr7_2:28253132-28253151 | Msa1055050:intron | 45.0% | |
| CTAATCAACAGTAGTGGTGG+GGG | + | chr7_2:28253133-28253152 | Msa1055050:intron | 45.0% | |
| ! | TAATCAACAGTAGTGGTGGG+GGG | + | chr7_2:28253134-28253153 | Msa1055050:intron | 45.0% |
| TGCGTAGATGAACATGGGAA+TGG | - | chr7_2:28253204-28253223 | None:intergenic | 45.0% | |
| ! | TGGAAAGTGTGGGAACAAAG+AGG | - | chr7_2:28253299-28253318 | None:intergenic | 45.0% |
| ! | GCAAACGAGATGGAAAGTGT+GGG | - | chr7_2:28253309-28253328 | None:intergenic | 45.0% |
| TGCAAACGAGATGGAAAGTG+TGG | - | chr7_2:28253310-28253329 | None:intergenic | 45.0% | |
| TGAGCGACAATAGGTCAGTT+AGG | - | chr7_2:28253356-28253375 | None:intergenic | 45.0% | |
| ! | TATGGTCATGATGGAAGGAG+GGG | - | chr7_2:28253441-28253460 | None:intergenic | 45.0% |
| ! | CATATGGTCATGATGGAAGG+AGG | - | chr7_2:28253443-28253462 | None:intergenic | 45.0% |
| ! | AGGCATATGGTCATGATGGA+AGG | - | chr7_2:28253446-28253465 | None:intergenic | 45.0% |
| GGTAAGGCATATGGTCATGA+TGG | - | chr7_2:28254277-28254296 | None:intergenic | 45.0% | |
| GACCGAAATGAATAAGAGCG+TGG | - | chr7_2:28253510-28253529 | None:intergenic | 45.0% | |
| ! | GGTTTCTGGATCAAGAACGT+TGG | + | chr7_2:28253599-28253618 | Msa1055050:intron | 45.0% |
| TTGGTTCCCTAGAGAAGTCA+AGG | + | chr7_2:28253618-28253637 | Msa1055050:intron | 45.0% | |
| ! | ATTTTCAGCCGATGTGATCG+TGG | + | chr7_2:28253655-28253674 | Msa1055050:intron | 45.0% |
| TTCCTACTCCACGATCACAT+CGG | - | chr7_2:28253666-28253685 | None:intergenic | 45.0% | |
| TCGTGGAGTAGGAACATGAT+AGG | + | chr7_2:28253672-28253691 | Msa1055050:intron | 45.0% | |
| CTTCATCCTTGGCTTCTCTA+GGG | + | chr7_2:28254099-28254118 | Msa1055050:intron | 45.0% | |
| ! | GGTTTCAAGATCTGGAACGT+CGG | - | chr7_2:28254127-28254146 | None:intergenic | 45.0% |
| !! | GGGACATTGGTTTCAAGATC+TGG | - | chr7_2:28254135-28254154 | None:intergenic | 45.0% |
| CTAAGACCACAATGGGGATA+TGG | + | chr7_2:28254159-28254178 | Msa1055050:intron | 45.0% | |
| GTACGAGTCAAGTTTGTCGT+TGG | - | chr7_2:28254199-28254218 | None:intergenic | 45.0% | |
| GGCATATGGTCATGATTGGA+AGG | + | chr7_2:28254282-28254301 | Msa1055050:intron | 45.0% | |
| ATGGTCATGATTGGAAGGAG+GGG | + | chr7_2:28254287-28254306 | Msa1055050:intron | 45.0% | |
| GAGCGACAAATAGGACAGTT+AGG | + | chr7_2:28254373-28254392 | Msa1055050:intron | 45.0% | |
| TGCAAACGAGATAGACAGTG+TGG | + | chr7_2:28254419-28254438 | Msa1055050:intron | 45.0% | |
| GCAAACGAGATAGACAGTGT+GGG | + | chr7_2:28254420-28254439 | Msa1055050:intron | 45.0% | |
| TAGACAGTGTGGGAACAAAG+AGG | + | chr7_2:28254430-28254449 | Msa1055050:intron | 45.0% | |
| ! | AACGAACTTTTCTAAGCCCG+TGG | + | chr7_2:28254555-28254574 | Msa1055050:intron | 45.0% |
| TCCCAATCAACACTAGTGGT+GGG | - | chr7_2:28254598-28254617 | None:intergenic | 45.0% | |
| TTGGGACTCCACATCATTGT+TGG | + | chr7_2:28254612-28254631 | Msa1055050:intron | 45.0% | |
| ! | CTACTGGTTACACTAGCTGT+TGG | - | chr7_2:28254722-28254741 | None:intergenic | 45.0% |
| AACCAGTAGCACTGCTATCA+TGG | + | chr7_2:28254733-28254752 | Msa1055050:intron | 45.0% | |
| ACCAGTAGCACTGCTATCAT+GGG | + | chr7_2:28254734-28254753 | Msa1055050:intron | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr7_2:28255166-28255185 | Msa1055050:intron | 45.0% |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr7_2:28255272-28255291 | None:intergenic | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr7_2:28255332-28255351 | Msa1055050:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr7_2:28255336-28255355 | None:intergenic | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr7_2:28255348-28255367 | None:intergenic | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | chr7_2:28255166-28255185 | None:intergenic | 45.0% |
| GTTGCTGGAAGTTCAGTGTT+TGG | + | chr7_2:28255613-28255632 | Msa1055050:CDS | 45.0% | |
| CTCAACAGAACTCCTCAGTA+AGG | - | chr7_2:28255665-28255684 | None:intergenic | 45.0% | |
| !! | TTATTATTATTATTATTAAC+TGG | + | chr7_2:28251413-28251432 | Msa1055050:intron | 5.0% |
| !!! | GTTGTAGCTGCTTTTGGTCG+TGG | - | chr7_2:28248618-28248637 | None:intergenic | 50.0% |
| !! | TGATCAATTCCGGCGCTGAT+TGG | + | chr7_2:28248790-28248809 | Msa1055050:CDS | 50.0% |
| ACGCGTTCAATTTCGAGCGT+TGG | + | chr7_2:28249193-28249212 | Msa1055050:intron | 50.0% | |
| !! | CGTTCAATTTCGAGCGTTGG+CGG | + | chr7_2:28249196-28249215 | Msa1055050:intron | 50.0% |
| TCAATTTGGGTGGCAATCCG+AGG | - | chr7_2:28249449-28249468 | None:intergenic | 50.0% | |
| TAGAATCCTCGGGAGAGTCT+TGG | + | chr7_2:28250228-28250247 | Msa1055050:intron | 50.0% | |
| ATCAAACCAAGACTCTCCCG+AGG | - | chr7_2:28250237-28250256 | None:intergenic | 50.0% | |
| GACTAGCATTCTTCAGGTCC+CGG | + | chr7_2:28250810-28250829 | Msa1055050:intron | 50.0% | |
| TAAGGGGAAAACGTTCAGCC+GGG | - | chr7_2:28250831-28250850 | None:intergenic | 50.0% | |
| GTTGGTTGCCAGGGATAATC+TGG | + | chr7_2:28251359-28251378 | Msa1055050:intron | 50.0% | |
| CAACCATTGCAGGGCATATC+TGG | + | chr7_2:28251667-28251686 | Msa1055050:intron | 50.0% | |
| AGTCCAGATATGCCCTGCAA+TGG | - | chr7_2:28251673-28251692 | None:intergenic | 50.0% | |
| !! | GAAGCACCAGCTTTTCCCAA+AGG | - | chr7_2:28251734-28251753 | None:intergenic | 50.0% |
| TTGGGAAAAGCTGGTGCTTC+TGG | + | chr7_2:28251734-28251753 | Msa1055050:CDS | 50.0% | |
| ! | CCAGGCTTTATCGATACACC+AGG | - | chr7_2:28251963-28251982 | None:intergenic | 50.0% |
| ! | CCTGGTGTATCGATAAAGCC+TGG | + | chr7_2:28251960-28251979 | Msa1055050:CDS | 50.0% |
| CGTCGAAGAGGTTTATCCTC+TGG | + | chr7_2:28251989-28252008 | Msa1055050:CDS | 50.0% | |
| GCGGGAAAAATGCATACCAG+AGG | - | chr7_2:28252008-28252027 | None:intergenic | 50.0% | |
| TTCCCGCTCTTGTTCTCATC+TGG | + | chr7_2:28252021-28252040 | Msa1055050:intron | 50.0% | |
| GACCAGATGAGAACAAGAGC+GGG | - | chr7_2:28252026-28252045 | None:intergenic | 50.0% | |
| GACTCAAGATACTCGGTCAC+AGG | - | chr7_2:28252087-28252106 | None:intergenic | 50.0% | |
| CACAAAGGGAATGGGTGAGA+AGG | - | chr7_2:28252172-28252191 | None:intergenic | 50.0% | |
| ACCCATTCCCTTTGTGTGTG+TGG | + | chr7_2:28252176-28252195 | Msa1055050:intron | 50.0% | |
| CAAACCAGGTCCGGATACTA+AGG | + | chr7_2:28252422-28252441 | Msa1055050:intron | 50.0% | |
| TCTTCCTTAGTATCCGGACC+TGG | - | chr7_2:28252429-28252448 | None:intergenic | 50.0% | |
| !! | GGTACTTGTGTACCGGTTTG+TGG | + | chr7_2:28252584-28252603 | Msa1055050:intron | 50.0% |
| AGCTACGGATGCAGCTTACA+AGG | - | chr7_2:28255016-28255035 | None:intergenic | 50.0% | |
| ! | AGCAGTGCTACTGGTTACAC+TGG | + | chr7_2:28252992-28253011 | Msa1055050:intron | 50.0% |
| ! | CTACTGGTTACACTGGCTGT+TGG | + | chr7_2:28252999-28253018 | Msa1055050:intron | 50.0% |
| AAGTGAGAAATCTCCGGCGT+TGG | - | chr7_2:28254635-28254654 | None:intergenic | 50.0% | |
| ! | CCCCACCACTACTGTTGATT+AGG | - | chr7_2:28253135-28253154 | None:intergenic | 50.0% |
| AGTGTGGGAACAAAGAGGCA+GGG | - | chr7_2:28253294-28253313 | None:intergenic | 50.0% | |
| AAGTGTGGGAACAAAGAGGC+AGG | - | chr7_2:28253295-28253314 | None:intergenic | 50.0% | |
| ATGCGTCAGTGCAAACGAGA+TGG | - | chr7_2:28253319-28253338 | None:intergenic | 50.0% | |
| ! | ATCTCGTTTGCACTGACGCA+TGG | + | chr7_2:28253318-28253337 | Msa1055050:intron | 50.0% |
| GCGAAGACATGAGCGACAAT+AGG | - | chr7_2:28253365-28253384 | None:intergenic | 50.0% | |
| GTCTGAGTCAAGTTCGTCGT+TGG | + | chr7_2:28253527-28253546 | Msa1055050:intron | 50.0% | |
| ! | ACCCATTGTGGTCTTAGAGG+CGG | + | chr7_2:28253570-28253589 | Msa1055050:intron | 50.0% |
| AGCCGATGTGATTCTGGATC+AGG | - | chr7_2:28254065-28254084 | None:intergenic | 50.0% | |
| CCTAGAGAAGCCAAGGATGA+AGG | - | chr7_2:28254101-28254120 | None:intergenic | 50.0% | |
| CCTTCATCCTTGGCTTCTCT+AGG | + | chr7_2:28254098-28254117 | Msa1055050:intron | 50.0% | |
| ! | TGGTCTTAGATGCGGGACAT+TGG | - | chr7_2:28254148-28254167 | None:intergenic | 50.0% |
| ! | TCCCGCATCTAAGACCACAA+TGG | + | chr7_2:28254151-28254170 | Msa1055050:intron | 50.0% |
| ! | CCCATTGTGGTCTTAGATGC+GGG | - | chr7_2:28254155-28254174 | None:intergenic | 50.0% |
| ! | CCCGCATCTAAGACCACAAT+GGG | + | chr7_2:28254152-28254171 | Msa1055050:intron | 50.0% |
| ! | CCCCATTGTGGTCTTAGATG+CGG | - | chr7_2:28254156-28254175 | None:intergenic | 50.0% |
| ! | CCGCATCTAAGACCACAATG+GGG | + | chr7_2:28254153-28254172 | Msa1055050:intron | 50.0% |
| ACCACAATGGGGATATGGTG+CGG | + | chr7_2:28254164-28254183 | Msa1055050:intron | 50.0% | |
| ! | CAATCAACACTAGTGGTGGG+GGG | - | chr7_2:28254595-28254614 | None:intergenic | 50.0% |
| CCAATCAACACTAGTGGTGG+GGG | - | chr7_2:28254596-28254615 | None:intergenic | 50.0% | |
| CCCAATCAACACTAGTGGTG+GGG | - | chr7_2:28254597-28254616 | None:intergenic | 50.0% | |
| !! | CCCCACCACTAGTGTTGATT+GGG | + | chr7_2:28254594-28254613 | Msa1055050:intron | 50.0% |
| GTCCCAATCAACACTAGTGG+TGG | - | chr7_2:28254599-28254618 | None:intergenic | 50.0% | |
| GGAGTCCCAATCAACACTAG+TGG | - | chr7_2:28254602-28254621 | None:intergenic | 50.0% | |
| AAGTGAGAAATCTCCGGCGT+TGG | + | chr7_2:28254635-28254654 | Msa1055050:intron | 50.0% | |
| ACCCATGATAGCAGTGCTAC+TGG | - | chr7_2:28254738-28254757 | None:intergenic | 50.0% | |
| AGCTACGGATGCAGCTTACA+AGG | + | chr7_2:28255016-28255035 | Msa1055050:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | - | chr7_2:28255392-28255411 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | - | chr7_2:28255391-28255410 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr7_2:28255273-28255292 | None:intergenic | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr7_2:28255331-28255350 | Msa1055050:intron | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr7_2:28255337-28255356 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | + | chr7_2:28255391-28255410 | Msa1055050:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | + | chr7_2:28255392-28255411 | Msa1055050:intron | 50.0% | |
| !! | TTGCAGGTTGATGGGGGTTT+AGG | + | chr7_2:28255544-28255563 | Msa1055050:intron | 50.0% |
| !! | TGCAGGTTGATGGGGGTTTA+GGG | + | chr7_2:28255545-28255564 | Msa1055050:intron | 50.0% |
| AGGGCCTTCAACCATAGATG+TGG | + | chr7_2:28255564-28255583 | Msa1055050:CDS | 50.0% | |
| GCAGCCACATCTATGGTTGA+AGG | - | chr7_2:28255571-28255590 | None:intergenic | 50.0% | |
| CATAGATGTGGCTGCATCAG+CGG | + | chr7_2:28255576-28255595 | Msa1055050:CDS | 50.0% | |
| ATAGATGTGGCTGCATCAGC+GGG | + | chr7_2:28255577-28255596 | Msa1055050:CDS | 50.0% | |
| GGAGCGAATTGCATTGTTGC+TGG | + | chr7_2:28255598-28255617 | Msa1055050:CDS | 50.0% | |
| CATGTGAAGCCAATCAGCGC+CGG | - | chr7_2:28248802-28248821 | None:intergenic | 55.0% | |
| !! | TTCGAGCGTTGGCGGTACAT+AGG | + | chr7_2:28249204-28249223 | Msa1055050:intron | 55.0% |
| ACCTCTTCGACGGATGTTCC+AGG | - | chr7_2:28251981-28252000 | None:intergenic | 55.0% | |
| ! | CGCCCTTTTCAAACCAGGTC+CGG | + | chr7_2:28252413-28252432 | Msa1055050:intron | 55.0% |
| ATCTCGAGCCTCGTCAGCTA+CGG | - | chr7_2:28252732-28252751 | None:intergenic | 55.0% | |
| TTATACCTGCCATCCGCCGT+CGG | + | chr7_2:28253066-28253085 | Msa1055050:intron | 55.0% | |
| GGGCTCACATGCACATACCA+AGG | + | chr7_2:28253154-28253173 | Msa1055050:intron | 55.0% | |
| !! | CCCGCCTCTAAGACCACAAT+GGG | - | chr7_2:28253574-28253593 | None:intergenic | 55.0% |
| ! | CCCATTGTGGTCTTAGAGGC+GGG | + | chr7_2:28253571-28253590 | Msa1055050:intron | 55.0% |
| !! | TCCCGCCTCTAAGACCACAA+TGG | - | chr7_2:28253575-28253594 | None:intergenic | 55.0% |
| ! | TGGTCTTAGAGGCGGGACAT+CGG | + | chr7_2:28253578-28253597 | Msa1055050:intron | 55.0% |
| AGCCGATGTGATCGTGGAGT+AGG | + | chr7_2:28253661-28253680 | Msa1055050:intron | 55.0% | |
| TCGGTTCCCTAGAGAAGCCA+AGG | - | chr7_2:28254108-28254127 | None:intergenic | 55.0% | |
| CCACAATGGGGATATGGTGC+GGG | + | chr7_2:28254165-28254184 | Msa1055050:intron | 55.0% | |
| GTCATGATTGGAAGGAGGGG+CGG | + | chr7_2:28254290-28254309 | Msa1055050:intron | 55.0% | |
| GGCTCACATGCACATACCAC+GGG | - | chr7_2:28254574-28254593 | None:intergenic | 55.0% | |
| GGGCTCACATGCACATACCA+CGG | - | chr7_2:28253154-28253173 | None:intergenic | 55.0% | |
| !! | CCCCCACCACTAGTGTTGAT+TGG | + | chr7_2:28254593-28254612 | Msa1055050:intron | 55.0% |
| TTATACCTGCCATCCGCCGT+CGG | - | chr7_2:28253066-28253085 | None:intergenic | 55.0% | |
| CGCTGATGCAGCCACATCTA+TGG | - | chr7_2:28255578-28255597 | None:intergenic | 55.0% | |
| !! | CGGCGCTGATTGGCTTCACA+TGG | + | chr7_2:28248800-28248819 | Msa1055050:CDS | 60.0% |
| TTTCTTGGACGGGGGGAGAG+TGG | + | chr7_2:28250049-28250068 | Msa1055050:intron | 60.0% | |
| AAGTCACACGGCATGAGGCC+TGG | + | chr7_2:28251942-28251961 | Msa1055050:CDS | 60.0% | |
| GCCTGGAACATCCGTCGAAG+AGG | + | chr7_2:28251977-28251996 | Msa1055050:CDS | 60.0% | |
| AGCTGCATCCGTAGCTGACG+AGG | + | chr7_2:28252721-28252740 | Msa1055050:intron | 60.0% | |
| GACGGCGGATGGCAGGTATA+AGG | - | chr7_2:28254662-28254681 | None:intergenic | 60.0% | |
| ! | ATCTCCGGCGTTGGAACCGA+CGG | - | chr7_2:28253085-28253104 | None:intergenic | 60.0% |
| ! | GGTCATGATGGAAGGAGGGG+TGG | - | chr7_2:28253438-28253457 | None:intergenic | 60.0% |
| !! | AGAGGCGGGACATCGGTTTC+TGG | + | chr7_2:28253585-28253604 | Msa1055050:intron | 60.0% |
| CCCGCACCATATCCCCATTG+TGG | - | chr7_2:28254168-28254187 | None:intergenic | 60.0% | |
| CAATGGGGATATGGTGCGGG+AGG | + | chr7_2:28254168-28254187 | Msa1055050:intron | 60.0% | |
| TAGCTGACGAGGCTCGACGA+AGG | - | chr7_2:28255001-28255020 | None:intergenic | 60.0% | |
| TCGTCGAGCCTCGTCAGCTA+CGG | + | chr7_2:28255001-28255020 | Msa1055050:intron | 60.0% | |
| AGCTGCATCCGTAGCTGACG+AGG | - | chr7_2:28252721-28252740 | None:intergenic | 60.0% | |
| ! | ATCTCCGGCGTTGGAGCCGA+CGG | + | chr7_2:28254644-28254663 | Msa1055050:intron | 65.0% |
| TGGAACCGACGGCGGATGGC+AGG | - | chr7_2:28253074-28253093 | None:intergenic | 70.0% | |
| GCGTTGGAACCGACGGCGGA+TGG | - | chr7_2:28253078-28253097 | None:intergenic | 70.0% | |
| !! | TCCGCCGTCGGTTCCAACGC+CGG | + | chr7_2:28253078-28253097 | Msa1055050:intron | 70.0% |
| ! | TCCGGCGTTGGAACCGACGG+CGG | - | chr7_2:28253082-28253101 | None:intergenic | 70.0% |
| ! | TCCGGCGTTGGAGCCGACGG+CGG | + | chr7_2:28254647-28254666 | Msa1055050:intron | 75.0% |
| !! | TCCGCCGTCGGCTCCAACGC+CGG | - | chr7_2:28254651-28254670 | None:intergenic | 75.0% |
| GCGTTGGAGCCGACGGCGGA+TGG | + | chr7_2:28254651-28254670 | Msa1055050:intron | 75.0% | |
| TGGAGCCGACGGCGGATGGC+AGG | + | chr7_2:28254655-28254674 | Msa1055050:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 28248566 | 28256002 | 28248566 | ID=Msa1055050;Name=Msa1055050 |
| chr7_2 | mRNA | 28248566 | 28256002 | 28248566 | ID=Msa1055050-mRNA-1;Parent=Msa1055050;Name=Msa1055050-mRNA-1;_AED=0.27;_eAED=0.27;_QI=148|0.71|0.75|1|0.71|0.87|8|306|224 |
| chr7_2 | exon | 28248566 | 28248830 | 28248566 | ID=Msa1055050-mRNA-1:exon:5905;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28251438 | 28251445 | 28251438 | ID=Msa1055050-mRNA-1:exon:5906;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28251508 | 28251570 | 28251508 | ID=Msa1055050-mRNA-1:exon:5907;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28251679 | 28251785 | 28251679 | ID=Msa1055050-mRNA-1:exon:5908;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28251913 | 28252010 | 28251913 | ID=Msa1055050-mRNA-1:exon:5909;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28252223 | 28252315 | 28252223 | ID=Msa1055050-mRNA-1:exon:5910;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28252430 | 28252471 | 28252430 | ID=Msa1055050-mRNA-1:exon:5911;Parent=Msa1055050-mRNA-1 |
| chr7_2 | exon | 28255550 | 28256002 | 28255550 | ID=Msa1055050-mRNA-1:exon:5912;Parent=Msa1055050-mRNA-1 |
| chr7_2 | five_prime_UTR | 28248566 | 28248713 | 28248566 | ID=Msa1055050-mRNA-1:five_prime_utr;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28248714 | 28248830 | 28248714 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28251438 | 28251445 | 28251438 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28251508 | 28251570 | 28251508 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28251679 | 28251785 | 28251679 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28251913 | 28252010 | 28251913 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28252223 | 28252315 | 28252223 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28252430 | 28252471 | 28252430 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | CDS | 28255550 | 28255696 | 28255550 | ID=Msa1055050-mRNA-1:cds;Parent=Msa1055050-mRNA-1 |
| chr7_2 | three_prime_UTR | 28255697 | 28256002 | 28255697 | ID=Msa1055050-mRNA-1:three_prime_utr;Parent=Msa1055050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
