Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1056110 | XP_013442712.1 | 98.030 | 203 | 4 | 0 | 1 | 203 | 1 | 203 | 4.88e-136 | 399 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1056110 | sp|Q94JU2|WTR18_ARATH | 60.099 | 203 | 78 | 1 | 1 | 203 | 1 | 200 | 1.42e-71 | 227 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1056110 | A0A072TH55 | 98.030 | 203 | 4 | 0 | 1 | 203 | 1 | 203 | 2.33e-136 | 399 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1056110 | Msa1056240 | 0.811277 | 7.585999e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1056110 | MtrunA17_Chr7g0227921 | 98.030 | 203 | 4 | 0 | 1 | 203 | 1 | 203 | 4.49e-140 | 399 |
Msa1056110 | MtrunA17_Chr6g0451261 | 54.656 | 247 | 95 | 5 | 1 | 233 | 1 | 244 | 1.93e-71 | 236 |
Msa1056110 | MtrunA17_Chr6g0451251 | 54.955 | 222 | 87 | 5 | 1 | 213 | 1 | 218 | 7.49e-70 | 220 |
Msa1056110 | MtrunA17_Chr6g0451171 | 57.073 | 205 | 81 | 3 | 1 | 202 | 1 | 201 | 8.88e-70 | 219 |
Msa1056110 | MtrunA17_Chr6g0451201 | 55.204 | 221 | 85 | 5 | 1 | 213 | 1 | 215 | 2.64e-67 | 213 |
Msa1056110 | MtrunA17_Chr6g0451211 | 54.808 | 208 | 84 | 5 | 1 | 202 | 1 | 204 | 1.43e-64 | 206 |
Msa1056110 | MtrunA17_Chr1g0150151 | 50.467 | 214 | 100 | 4 | 1 | 209 | 1 | 213 | 8.46e-61 | 196 |
Msa1056110 | MtrunA17_Chr4g0059311 | 46.860 | 207 | 104 | 5 | 1 | 203 | 1 | 205 | 1.71e-47 | 162 |
Msa1056110 | MtrunA17_Chr6g0451181 | 63.636 | 121 | 44 | 0 | 4 | 124 | 5 | 125 | 2.56e-45 | 149 |
Msa1056110 | MtrunA17_Chr5g0413961 | 46.939 | 196 | 99 | 4 | 9 | 203 | 12 | 203 | 8.68e-45 | 154 |
Msa1056110 | MtrunA17_Chr3g0126101 | 44.949 | 198 | 107 | 2 | 8 | 205 | 3 | 198 | 9.94e-44 | 152 |
Msa1056110 | MtrunA17_Chr5g0413921 | 44.845 | 194 | 96 | 3 | 16 | 203 | 12 | 200 | 9.76e-40 | 141 |
Msa1056110 | MtrunA17_Chr5g0413941 | 37.551 | 245 | 126 | 6 | 16 | 242 | 12 | 247 | 1.03e-39 | 141 |
Msa1056110 | MtrunA17_Chr5g0413951 | 42.328 | 189 | 108 | 1 | 16 | 203 | 12 | 200 | 3.42e-39 | 140 |
Msa1056110 | MtrunA17_Chr5g0413931 | 39.908 | 218 | 113 | 5 | 15 | 224 | 10 | 217 | 1.11e-38 | 139 |
Msa1056110 | MtrunA17_Chr7g0255561 | 34.409 | 186 | 111 | 4 | 12 | 189 | 15 | 197 | 2.73e-30 | 117 |
Msa1056110 | MtrunA17_Chr7g0255581 | 34.409 | 186 | 111 | 4 | 12 | 189 | 15 | 197 | 2.73e-30 | 117 |
Msa1056110 | MtrunA17_Chr8g0354121 | 33.514 | 185 | 116 | 4 | 7 | 185 | 9 | 192 | 2.77e-27 | 109 |
Msa1056110 | MtrunA17_Chr3g0081421 | 33.023 | 215 | 134 | 4 | 3 | 208 | 6 | 219 | 1.06e-26 | 107 |
Msa1056110 | MtrunA17_Chr3g0114731 | 36.923 | 195 | 116 | 6 | 12 | 203 | 19 | 209 | 2.09e-26 | 106 |
Msa1056110 | MtrunA17_Chr1g0182291 | 38.554 | 166 | 99 | 3 | 26 | 190 | 30 | 193 | 4.74e-26 | 105 |
Msa1056110 | MtrunA17_Chr1g0160181 | 33.333 | 201 | 129 | 4 | 7 | 203 | 14 | 213 | 5.40e-26 | 105 |
Msa1056110 | MtrunA17_Chr8g0334761 | 34.848 | 198 | 121 | 3 | 11 | 203 | 10 | 204 | 8.30e-26 | 104 |
Msa1056110 | MtrunA17_Chr1g0177221 | 29.952 | 207 | 139 | 4 | 6 | 209 | 13 | 216 | 2.15e-25 | 101 |
Msa1056110 | MtrunA17_Chr3g0126091 | 33.654 | 208 | 128 | 5 | 9 | 209 | 9 | 213 | 2.28e-25 | 103 |
Msa1056110 | MtrunA17_Chr3g0081511 | 35.233 | 193 | 116 | 5 | 4 | 189 | 7 | 197 | 2.38e-25 | 103 |
Msa1056110 | MtrunA17_Chr6g0463971 | 33.816 | 207 | 121 | 6 | 12 | 206 | 17 | 219 | 8.39e-24 | 99.0 |
Msa1056110 | MtrunA17_Chr7g0271561 | 31.707 | 205 | 126 | 5 | 10 | 203 | 6 | 207 | 1.14e-23 | 99.0 |
Msa1056110 | MtrunA17_Chr1g0160171 | 32.065 | 184 | 122 | 3 | 8 | 189 | 13 | 195 | 1.61e-23 | 98.6 |
Msa1056110 | MtrunA17_Chr2g0284261 | 33.333 | 198 | 127 | 4 | 8 | 203 | 5 | 199 | 7.09e-23 | 96.7 |
Msa1056110 | MtrunA17_Chr8g0334711 | 32.474 | 194 | 130 | 1 | 11 | 203 | 10 | 203 | 8.58e-23 | 93.6 |
Msa1056110 | MtrunA17_Chr1g0211801 | 32.057 | 209 | 122 | 6 | 6 | 204 | 6 | 204 | 1.22e-22 | 94.4 |
Msa1056110 | MtrunA17_Chr3g0129571 | 30.542 | 203 | 132 | 4 | 9 | 203 | 5 | 206 | 1.58e-22 | 95.5 |
Msa1056110 | MtrunA17_Chr1g0164831 | 33.508 | 191 | 114 | 6 | 22 | 204 | 11 | 196 | 2.44e-22 | 94.7 |
Msa1056110 | MtrunA17_Chr7g0263101 | 35.948 | 153 | 96 | 2 | 7 | 158 | 9 | 160 | 1.47e-21 | 93.2 |
Msa1056110 | MtrunA17_Chr6g0483401 | 38.509 | 161 | 90 | 5 | 58 | 212 | 58 | 215 | 4.52e-21 | 91.7 |
Msa1056110 | MtrunA17_Chr3g0114691 | 34.177 | 158 | 97 | 4 | 37 | 189 | 46 | 201 | 5.40e-21 | 91.7 |
Msa1056110 | MtrunA17_Chr5g0408001 | 36.054 | 147 | 92 | 2 | 16 | 161 | 15 | 160 | 8.67e-21 | 90.9 |
Msa1056110 | MtrunA17_Chr1g0155761 | 30.364 | 247 | 137 | 6 | 16 | 230 | 26 | 269 | 1.49e-20 | 90.5 |
Msa1056110 | MtrunA17_Chr4g0073241 | 33.333 | 186 | 117 | 5 | 31 | 212 | 28 | 210 | 1.64e-20 | 90.1 |
Msa1056110 | MtrunA17_Chr1g0160111 | 34.409 | 186 | 113 | 5 | 26 | 203 | 22 | 206 | 2.18e-20 | 89.7 |
Msa1056110 | MtrunA17_Chr3g0114711 | 34.659 | 176 | 102 | 4 | 37 | 205 | 40 | 209 | 2.19e-20 | 90.1 |
Msa1056110 | MtrunA17_Chr5g0408031 | 36.054 | 147 | 92 | 2 | 16 | 161 | 15 | 160 | 2.76e-20 | 89.7 |
Msa1056110 | MtrunA17_Chr3g0129601 | 31.343 | 201 | 132 | 4 | 8 | 203 | 26 | 225 | 4.41e-20 | 89.0 |
Msa1056110 | MtrunA17_Chr2g0310441 | 32.877 | 219 | 138 | 5 | 11 | 222 | 10 | 226 | 6.63e-20 | 88.2 |
Msa1056110 | MtrunA17_Chr5g0408041 | 34.694 | 147 | 94 | 2 | 16 | 161 | 16 | 161 | 8.16e-20 | 88.2 |
Msa1056110 | MtrunA17_Chr3g0129591 | 29.703 | 202 | 135 | 3 | 9 | 203 | 3 | 204 | 1.23e-19 | 87.4 |
Msa1056110 | MtrunA17_Chr6g0451231 | 55.000 | 80 | 30 | 2 | 125 | 202 | 1 | 76 | 2.03e-19 | 80.9 |
Msa1056110 | MtrunA17_Chr1g0184221 | 30.317 | 221 | 117 | 6 | 7 | 203 | 12 | 219 | 3.00e-19 | 86.7 |
Msa1056110 | MtrunA17_Chr5g0407971 | 32.022 | 178 | 114 | 4 | 16 | 188 | 16 | 191 | 3.14e-19 | 86.7 |
Msa1056110 | MtrunA17_Chr2g0278561 | 30.952 | 210 | 133 | 4 | 8 | 209 | 12 | 217 | 3.34e-19 | 86.7 |
Msa1056110 | MtrunA17_Chr3g0114701 | 30.500 | 200 | 134 | 3 | 8 | 203 | 6 | 204 | 8.64e-19 | 85.5 |
Msa1056110 | MtrunA17_Chr8g0334771 | 35.714 | 196 | 122 | 3 | 11 | 203 | 10 | 204 | 1.12e-18 | 84.7 |
Msa1056110 | MtrunA17_Chr5g0407991 | 34.694 | 147 | 94 | 2 | 16 | 161 | 14 | 159 | 1.38e-18 | 84.7 |
Msa1056110 | MtrunA17_Chr6g0451191 | 48.958 | 96 | 38 | 3 | 125 | 213 | 1 | 92 | 2.99e-18 | 81.6 |
Msa1056110 | MtrunA17_Chr1g0186641 | 29.412 | 204 | 139 | 4 | 8 | 209 | 10 | 210 | 3.38e-18 | 83.2 |
Msa1056110 | MtrunA17_Chr2g0278541 | 31.707 | 205 | 127 | 5 | 10 | 203 | 11 | 213 | 1.09e-17 | 82.4 |
Msa1056110 | MtrunA17_Chr3g0129581 | 31.364 | 220 | 140 | 6 | 9 | 220 | 3 | 219 | 1.21e-17 | 81.6 |
Msa1056110 | MtrunA17_Chr1g0186561 | 27.184 | 206 | 148 | 2 | 5 | 209 | 10 | 214 | 2.20e-17 | 80.9 |
Msa1056110 | MtrunA17_Chr4g0050941 | 32.927 | 164 | 109 | 1 | 10 | 172 | 11 | 174 | 2.25e-17 | 81.3 |
Msa1056110 | MtrunA17_Chr1g0186601 | 29.756 | 205 | 139 | 4 | 7 | 209 | 12 | 213 | 2.29e-17 | 80.9 |
Msa1056110 | MtrunA17_Chr1g0186611 | 28.431 | 204 | 143 | 3 | 7 | 209 | 12 | 213 | 3.27e-17 | 80.5 |
Msa1056110 | MtrunA17_Chr3g0142131 | 30.392 | 204 | 124 | 4 | 16 | 203 | 25 | 226 | 3.37e-17 | 80.9 |
Msa1056110 | MtrunA17_Chr2g0332001 | 31.818 | 198 | 129 | 5 | 15 | 209 | 42 | 236 | 4.25e-17 | 80.5 |
Msa1056110 | MtrunA17_Chr1g0171301 | 28.780 | 205 | 143 | 3 | 7 | 209 | 12 | 215 | 4.77e-17 | 80.1 |
Msa1056110 | MtrunA17_Chr4g0051001 | 31.863 | 204 | 131 | 5 | 12 | 209 | 32 | 233 | 1.70e-16 | 78.2 |
Msa1056110 | MtrunA17_Chr2g0278551 | 30.244 | 205 | 138 | 3 | 3 | 203 | 4 | 207 | 2.59e-16 | 78.2 |
Msa1056110 | MtrunA17_Chr8g0334751 | 38.961 | 154 | 92 | 2 | 31 | 182 | 31 | 184 | 2.62e-16 | 78.2 |
Msa1056110 | MtrunA17_Chr4g0050891 | 33.333 | 165 | 108 | 2 | 8 | 171 | 10 | 173 | 2.93e-16 | 77.8 |
Msa1056110 | MtrunA17_Chr2g0290611 | 31.553 | 206 | 134 | 4 | 3 | 203 | 4 | 207 | 5.25e-16 | 77.0 |
Msa1056110 | MtrunA17_Chr4g0050881 | 35.762 | 151 | 94 | 2 | 8 | 157 | 6 | 154 | 1.40e-15 | 75.9 |
Msa1056110 | MtrunA17_Chr1g0150651 | 49.398 | 83 | 37 | 3 | 125 | 203 | 1 | 82 | 3.00e-15 | 69.7 |
Msa1056110 | MtrunA17_Chr8g0369841 | 33.333 | 147 | 96 | 2 | 16 | 161 | 14 | 159 | 3.22e-15 | 75.1 |
Msa1056110 | MtrunA17_Chr1g0186571 | 32.022 | 178 | 112 | 5 | 36 | 209 | 38 | 210 | 5.07e-15 | 74.3 |
Msa1056110 | MtrunA17_Chr4g0051021 | 27.830 | 212 | 137 | 5 | 12 | 214 | 15 | 219 | 2.96e-14 | 72.0 |
Msa1056110 | MtrunA17_Chr1g0150641 | 50.000 | 58 | 29 | 0 | 75 | 132 | 3 | 60 | 4.30e-14 | 65.9 |
Msa1056110 | MtrunA17_Chr8g0383731 | 31.683 | 202 | 125 | 5 | 12 | 203 | 6 | 204 | 6.57e-14 | 70.9 |
Msa1056110 | MtrunA17_Chr8g0334731 | 36.975 | 119 | 68 | 3 | 90 | 203 | 71 | 187 | 1.66e-13 | 67.8 |
Msa1056110 | MtrunA17_Chr6g0451221 | 66.667 | 45 | 15 | 0 | 81 | 125 | 6 | 50 | 6.84e-13 | 62.0 |
Msa1056110 | MtrunA17_Chr4g0050911 | 33.898 | 118 | 68 | 2 | 96 | 203 | 16 | 133 | 1.61e-12 | 64.3 |
Msa1056110 | MtrunA17_Chr5g0441761 | 34.848 | 132 | 82 | 3 | 42 | 171 | 43 | 172 | 2.01e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1056110 | AT3G28050.1 | 60.099 | 203 | 78 | 1 | 1 | 203 | 1 | 200 | 1.45e-72 | 227 |
Msa1056110 | AT5G40240.1 | 51.643 | 213 | 97 | 2 | 1 | 208 | 9 | 220 | 1.57e-66 | 212 |
Msa1056110 | AT5G40240.3 | 51.643 | 213 | 97 | 2 | 1 | 208 | 9 | 220 | 1.57e-66 | 212 |
Msa1056110 | AT5G40240.2 | 51.643 | 213 | 97 | 2 | 1 | 208 | 23 | 234 | 2.13e-66 | 212 |
Msa1056110 | AT5G40230.1 | 52.582 | 213 | 95 | 2 | 1 | 208 | 10 | 221 | 3.01e-65 | 208 |
Msa1056110 | AT5G40210.1 | 51.500 | 200 | 82 | 1 | 4 | 203 | 5 | 189 | 2.53e-56 | 184 |
Msa1056110 | AT4G15540.1 | 48.077 | 208 | 99 | 1 | 1 | 208 | 6 | 204 | 1.17e-49 | 167 |
Msa1056110 | AT4G15540.2 | 48.077 | 208 | 99 | 1 | 1 | 208 | 6 | 204 | 1.17e-49 | 167 |
Msa1056110 | AT3G28130.6 | 52.239 | 201 | 89 | 2 | 8 | 203 | 9 | 207 | 1.83e-47 | 158 |
Msa1056110 | AT3G28100.2 | 51.269 | 197 | 89 | 2 | 16 | 207 | 18 | 212 | 2.07e-46 | 156 |
Msa1056110 | AT3G28130.4 | 52.239 | 201 | 89 | 2 | 8 | 203 | 9 | 207 | 2.16e-46 | 157 |
Msa1056110 | AT3G28100.3 | 51.813 | 193 | 86 | 2 | 16 | 203 | 18 | 208 | 5.70e-46 | 155 |
Msa1056110 | AT3G28130.2 | 52.239 | 201 | 89 | 2 | 8 | 203 | 9 | 207 | 3.91e-45 | 156 |
Msa1056110 | AT3G28100.1 | 51.813 | 193 | 86 | 2 | 16 | 203 | 18 | 208 | 5.96e-45 | 155 |
Msa1056110 | AT3G28080.3 | 50.259 | 193 | 89 | 2 | 16 | 203 | 18 | 208 | 3.33e-42 | 147 |
Msa1056110 | AT3G28080.1 | 50.259 | 193 | 89 | 2 | 16 | 203 | 18 | 208 | 1.42e-41 | 147 |
Msa1056110 | AT3G28070.3 | 45.217 | 230 | 107 | 3 | 16 | 229 | 21 | 247 | 3.36e-39 | 139 |
Msa1056110 | AT3G28070.1 | 45.217 | 230 | 107 | 3 | 16 | 229 | 21 | 247 | 7.85e-39 | 139 |
Msa1056110 | AT3G28080.2 | 46.632 | 193 | 88 | 3 | 16 | 203 | 18 | 200 | 2.32e-33 | 125 |
Msa1056110 | AT3G30340.2 | 36.735 | 196 | 107 | 6 | 19 | 203 | 15 | 204 | 9.27e-29 | 111 |
Msa1056110 | AT5G07050.1 | 37.888 | 161 | 96 | 3 | 12 | 171 | 18 | 175 | 1.79e-28 | 112 |
Msa1056110 | AT3G30340.1 | 36.735 | 196 | 107 | 6 | 19 | 203 | 15 | 204 | 8.26e-28 | 110 |
Msa1056110 | AT1G60050.1 | 35.885 | 209 | 121 | 5 | 7 | 203 | 8 | 215 | 5.20e-27 | 108 |
Msa1056110 | AT2G37460.1 | 37.433 | 187 | 113 | 3 | 4 | 189 | 7 | 190 | 7.17e-27 | 108 |
Msa1056110 | AT1G70260.1 | 35.981 | 214 | 124 | 4 | 1 | 203 | 1 | 212 | 7.66e-27 | 108 |
Msa1056110 | AT2G39510.1 | 37.349 | 166 | 102 | 2 | 8 | 172 | 4 | 168 | 8.12e-27 | 107 |
Msa1056110 | AT3G28070.2 | 43.871 | 155 | 68 | 3 | 91 | 229 | 4 | 155 | 1.13e-26 | 105 |
Msa1056110 | AT4G08290.2 | 36.022 | 186 | 114 | 3 | 8 | 189 | 9 | 193 | 3.06e-26 | 104 |
Msa1056110 | AT4G08290.1 | 34.848 | 198 | 124 | 3 | 10 | 203 | 11 | 207 | 2.52e-25 | 103 |
Msa1056110 | AT1G21890.1 | 37.821 | 156 | 95 | 2 | 4 | 158 | 3 | 157 | 4.87e-25 | 103 |
Msa1056110 | AT1G21890.2 | 37.821 | 156 | 95 | 2 | 4 | 158 | 3 | 157 | 5.57e-25 | 102 |
Msa1056110 | AT1G11460.1 | 32.727 | 220 | 135 | 6 | 12 | 226 | 16 | 227 | 1.17e-24 | 101 |
Msa1056110 | AT1G11450.4 | 32.444 | 225 | 128 | 7 | 12 | 226 | 16 | 226 | 2.30e-24 | 100 |
Msa1056110 | AT3G28080.4 | 50.000 | 118 | 52 | 2 | 91 | 203 | 4 | 119 | 2.44e-24 | 97.8 |
Msa1056110 | AT1G11450.3 | 32.444 | 225 | 128 | 7 | 12 | 226 | 16 | 226 | 3.48e-24 | 100 |
Msa1056110 | AT3G56620.1 | 36.686 | 169 | 104 | 3 | 12 | 179 | 11 | 177 | 4.58e-24 | 100 |
Msa1056110 | AT1G09380.1 | 32.338 | 201 | 129 | 3 | 9 | 203 | 5 | 204 | 8.48e-24 | 99.8 |
Msa1056110 | AT3G28080.5 | 50.000 | 118 | 52 | 2 | 91 | 203 | 4 | 119 | 9.01e-24 | 97.8 |
Msa1056110 | AT3G28080.7 | 50.000 | 118 | 52 | 2 | 91 | 203 | 4 | 119 | 9.01e-24 | 97.8 |
Msa1056110 | AT3G28080.8 | 50.000 | 118 | 52 | 2 | 91 | 203 | 4 | 119 | 9.01e-24 | 97.8 |
Msa1056110 | AT3G28080.6 | 50.000 | 118 | 52 | 2 | 91 | 203 | 4 | 119 | 9.01e-24 | 97.8 |
Msa1056110 | AT3G28130.5 | 51.639 | 122 | 52 | 2 | 87 | 203 | 2 | 121 | 1.36e-23 | 97.4 |
Msa1056110 | AT3G28130.1 | 51.639 | 122 | 52 | 2 | 87 | 203 | 2 | 121 | 1.36e-23 | 97.4 |
Msa1056110 | AT1G01070.1 | 34.184 | 196 | 121 | 5 | 17 | 205 | 18 | 212 | 5.50e-23 | 97.4 |
Msa1056110 | AT4G08300.1 | 36.538 | 156 | 93 | 3 | 37 | 187 | 36 | 190 | 6.50e-23 | 97.1 |
Msa1056110 | AT2G40900.1 | 38.000 | 150 | 91 | 2 | 12 | 160 | 11 | 159 | 6.71e-23 | 97.4 |
Msa1056110 | AT3G53210.3 | 34.579 | 214 | 128 | 7 | 16 | 223 | 14 | 221 | 2.15e-22 | 94.0 |
Msa1056110 | AT4G01440.4 | 32.243 | 214 | 132 | 7 | 3 | 209 | 1 | 208 | 2.21e-22 | 94.0 |
Msa1056110 | AT4G01430.2 | 34.239 | 184 | 115 | 5 | 25 | 203 | 22 | 204 | 4.17e-22 | 94.0 |
Msa1056110 | AT1G44800.1 | 36.184 | 152 | 94 | 3 | 36 | 185 | 35 | 185 | 4.99e-22 | 94.7 |
Msa1056110 | AT4G01430.1 | 34.239 | 184 | 115 | 5 | 25 | 203 | 22 | 204 | 5.89e-22 | 94.4 |
Msa1056110 | AT5G13670.1 | 34.595 | 185 | 115 | 3 | 12 | 191 | 8 | 191 | 9.70e-22 | 94.0 |
Msa1056110 | AT4G01440.3 | 32.243 | 214 | 132 | 7 | 3 | 209 | 1 | 208 | 1.04e-21 | 93.2 |
Msa1056110 | AT4G01440.1 | 32.243 | 214 | 132 | 7 | 3 | 209 | 1 | 208 | 1.34e-21 | 93.6 |
Msa1056110 | AT3G53210.1 | 34.579 | 214 | 128 | 7 | 16 | 223 | 14 | 221 | 1.81e-21 | 93.2 |
Msa1056110 | AT1G11450.5 | 33.508 | 191 | 103 | 7 | 46 | 226 | 6 | 182 | 9.23e-21 | 90.1 |
Msa1056110 | AT1G11450.2 | 33.511 | 188 | 101 | 7 | 49 | 226 | 2 | 175 | 3.56e-20 | 88.6 |
Msa1056110 | AT3G28070.4 | 55.963 | 109 | 48 | 0 | 16 | 124 | 21 | 129 | 4.37e-20 | 86.7 |
Msa1056110 | AT4G28040.1 | 32.984 | 191 | 114 | 4 | 15 | 203 | 13 | 191 | 5.57e-19 | 85.9 |
Msa1056110 | AT4G28040.5 | 32.984 | 191 | 114 | 4 | 15 | 203 | 13 | 191 | 5.57e-19 | 85.9 |
Msa1056110 | AT4G28040.3 | 32.984 | 191 | 114 | 4 | 15 | 203 | 13 | 191 | 5.57e-19 | 85.9 |
Msa1056110 | AT4G28040.4 | 32.984 | 191 | 114 | 4 | 15 | 203 | 13 | 191 | 5.57e-19 | 85.9 |
Msa1056110 | AT4G28040.2 | 32.984 | 191 | 114 | 4 | 15 | 203 | 13 | 191 | 5.57e-19 | 85.9 |
Msa1056110 | AT1G75500.1 | 30.435 | 207 | 131 | 5 | 16 | 212 | 24 | 227 | 6.50e-19 | 86.3 |
Msa1056110 | AT1G75500.2 | 30.435 | 207 | 131 | 5 | 16 | 212 | 24 | 227 | 6.50e-19 | 86.3 |
Msa1056110 | AT5G45370.2 | 32.524 | 206 | 119 | 5 | 16 | 203 | 24 | 227 | 7.46e-19 | 85.9 |
Msa1056110 | AT5G45370.4 | 32.524 | 206 | 119 | 5 | 16 | 203 | 24 | 227 | 7.46e-19 | 85.9 |
Msa1056110 | AT5G45370.1 | 32.275 | 189 | 118 | 4 | 16 | 203 | 24 | 203 | 1.17e-18 | 85.1 |
Msa1056110 | AT4G01450.4 | 28.571 | 196 | 129 | 4 | 12 | 203 | 10 | 198 | 2.14e-18 | 82.8 |
Msa1056110 | AT4G01450.3 | 28.571 | 196 | 129 | 4 | 12 | 203 | 10 | 198 | 3.07e-18 | 82.4 |
Msa1056110 | AT4G01450.1 | 28.571 | 196 | 129 | 4 | 12 | 203 | 10 | 198 | 4.25e-18 | 83.2 |
Msa1056110 | AT4G01450.2 | 28.571 | 196 | 129 | 4 | 12 | 203 | 10 | 198 | 5.19e-18 | 83.2 |
Msa1056110 | AT3G18200.2 | 30.612 | 196 | 131 | 4 | 16 | 209 | 39 | 231 | 8.86e-18 | 82.8 |
Msa1056110 | AT1G01070.2 | 33.133 | 166 | 105 | 4 | 44 | 205 | 2 | 165 | 1.03e-17 | 82.0 |
Msa1056110 | AT4G24980.1 | 30.899 | 178 | 100 | 3 | 31 | 208 | 6 | 160 | 1.99e-17 | 80.5 |
Msa1056110 | AT3G53210.2 | 37.879 | 132 | 74 | 4 | 96 | 223 | 37 | 164 | 4.79e-17 | 80.1 |
Msa1056110 | AT4G30420.1 | 33.152 | 184 | 112 | 6 | 28 | 203 | 14 | 194 | 9.42e-17 | 79.7 |
Msa1056110 | AT4G30420.2 | 33.152 | 184 | 112 | 6 | 28 | 203 | 24 | 204 | 1.01e-16 | 79.7 |
Msa1056110 | AT5G64700.2 | 32.353 | 204 | 122 | 4 | 12 | 203 | 8 | 207 | 3.47e-16 | 77.0 |
Msa1056110 | AT1G11450.1 | 37.143 | 140 | 66 | 5 | 96 | 226 | 8 | 134 | 5.36e-16 | 76.3 |
Msa1056110 | AT5G64700.1 | 34.804 | 204 | 112 | 6 | 15 | 203 | 10 | 207 | 8.99e-16 | 77.0 |
Msa1056110 | AT1G68170.2 | 30.435 | 207 | 136 | 4 | 4 | 203 | 3 | 208 | 4.12e-15 | 75.1 |
Msa1056110 | AT1G68170.1 | 31.606 | 193 | 126 | 3 | 16 | 203 | 7 | 198 | 2.88e-14 | 72.4 |
Msa1056110 | AT3G45870.9 | 32.867 | 143 | 94 | 2 | 16 | 157 | 16 | 157 | 3.94e-14 | 71.2 |
Msa1056110 | AT3G45870.8 | 32.867 | 143 | 94 | 2 | 16 | 157 | 16 | 157 | 9.01e-14 | 70.9 |
Msa1056110 | AT3G45870.1 | 32.867 | 143 | 94 | 2 | 16 | 157 | 16 | 157 | 9.63e-14 | 71.2 |
Msa1056110 | AT2G37450.2 | 31.250 | 176 | 100 | 2 | 6 | 181 | 3 | 157 | 4.52e-13 | 68.9 |
Msa1056110 | AT1G43650.2 | 31.282 | 195 | 130 | 3 | 16 | 209 | 11 | 202 | 1.88e-12 | 66.2 |
Msa1056110 | AT1G43650.1 | 32.275 | 189 | 124 | 3 | 16 | 203 | 11 | 196 | 3.69e-12 | 66.2 |
Msa1056110 | AT1G25270.1 | 28.125 | 192 | 133 | 4 | 16 | 203 | 7 | 197 | 7.49e-12 | 65.5 |
Msa1056110 | AT4G19185.1 | 27.119 | 177 | 124 | 3 | 16 | 188 | 25 | 200 | 2.71e-11 | 63.9 |
Msa1056110 | AT5G45370.6 | 36.905 | 84 | 53 | 0 | 96 | 179 | 2 | 85 | 5.62e-11 | 62.4 |
Msa1056110 | AT5G45370.5 | 36.905 | 84 | 53 | 0 | 96 | 179 | 2 | 85 | 5.62e-11 | 62.4 |
Find 51 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTATGCAAAATTGGTCTTCT+TGG | 0.222542 | 7_2:+32750361 | Msa1056110:CDS |
TACAAGGATTTGGTTCCTTT+TGG | 0.276744 | 7_2:+32749992 | Msa1056110:CDS |
AAGATATTGTTACAAGGATT+TGG | 0.289371 | 7_2:+32749982 | Msa1056110:CDS |
AAACCAATACTATGCAAAAT+TGG | 0.339357 | 7_2:+32750352 | Msa1056110:CDS |
AGTATATATTAGTTCCCTTA+TGG | 0.340842 | 7_2:+32752421 | Msa1056110:CDS |
CAGAAGTTCATCTCAAATCA+TGG | 0.348039 | 7_2:+32750490 | Msa1056110:intron |
TATGCAAAATTGGTCTTCTT+GGG | 0.365472 | 7_2:+32750362 | Msa1056110:CDS |
TGCTCCTGATATAGATACTA+TGG | 0.377453 | 7_2:-32752271 | None:intergenic |
TTGGTCTTCTTGGGTTGATC+GGG | 0.412468 | 7_2:+32750371 | Msa1056110:CDS |
TCTCAAATCATGGGTTATAC+AGG | 0.430929 | 7_2:+32750500 | Msa1056110:CDS |
CATAGTATTGGTTTACTAAG+AGG | 0.434696 | 7_2:-32750343 | None:intergenic |
GGTACCATAGTATCTATATC+AGG | 0.442799 | 7_2:+32752267 | Msa1056110:CDS |
ATTGGTCTTCTTGGGTTGAT+CGG | 0.449307 | 7_2:+32750370 | Msa1056110:CDS |
TACTAACCTTGTGGAGATGA+AGG | 0.451898 | 7_2:-32750149 | None:intergenic |
AATCATCATCAGATCAAAGC+TGG | 0.457498 | 7_2:+32752370 | Msa1056110:CDS |
TTCCTCAGCCATCAGCAACT+TGG | 0.458083 | 7_2:+32750547 | Msa1056110:CDS |
TACCTGTACAATGTACCATA+AGG | 0.465976 | 7_2:-32752436 | None:intergenic |
TTCAAAGCTGCTACCGTGAA+AGG | 0.466886 | 7_2:+32750061 | Msa1056110:CDS |
AGTGGAAGGGTTTGTTCAAA+TGG | 0.474370 | 7_2:-32752745 | None:intergenic |
TCCCTTATGGTACATTGTAC+AGG | 0.496069 | 7_2:+32752434 | Msa1056110:CDS |
AAAATATCGCTGCATGTCGT+TGG | 0.497257 | 7_2:+32752850 | Msa1056110:CDS |
GATCTAAGAGCAATGATGAT+TGG | 0.500241 | 7_2:-32752321 | None:intergenic |
AAGAAGAAACCTGAAAATGA+TGG | 0.507022 | 7_2:-32750594 | None:intergenic |
ATGGTAACTCATTCCTTTCA+CGG | 0.511389 | 7_2:-32750074 | None:intergenic |
ACCTGTACAATGTACCATAA+GGG | 0.513397 | 7_2:-32752435 | None:intergenic |
TCAGATCAAAGCTGGGCCAT+TGG | 0.519930 | 7_2:+32752378 | Msa1056110:CDS |
ATGGTAACCATCAAACCAAA+AGG | 0.520460 | 7_2:-32750007 | None:intergenic |
GATCAAAGCTGGGCCATTGG+TGG | 0.533016 | 7_2:+32752381 | Msa1056110:CDS |
CACCAAGTTGCTGATGGCTG+AGG | 0.534009 | 7_2:-32750549 | None:intergenic |
AAGTAGTCAAGCCAAGGTGG+TGG | 0.543714 | 7_2:+32752245 | Msa1056110:CDS |
AGAAGTTCATCTCAAATCAT+GGG | 0.564341 | 7_2:+32750491 | Msa1056110:intron |
CTTGTGGAGATGAAGGGTGC+TGG | 0.565297 | 7_2:-32750142 | None:intergenic |
GCAAGCAAGAAGGTAAAAGC+TGG | 0.569611 | 7_2:-32750572 | None:intergenic |
GAAAATGATGGCAAGCAAGA+AGG | 0.569755 | 7_2:-32750582 | None:intergenic |
ACTAACCTTGTGGAGATGAA+GGG | 0.578351 | 7_2:-32750148 | None:intergenic |
GGCACTAAGATATTGTTACA+AGG | 0.582034 | 7_2:+32749976 | Msa1056110:CDS |
TACTATGGTACCCACCACCT+TGG | 0.588212 | 7_2:-32752256 | None:intergenic |
AGCTGGCACCAAGTTGCTGA+TGG | 0.594486 | 7_2:-32750555 | None:intergenic |
ATCATCATCAGATCAAAGCT+GGG | 0.596636 | 7_2:+32752371 | Msa1056110:CDS |
AGCAACGTTGATGCATTCCA+TGG | 0.599026 | 7_2:-32750026 | None:intergenic |
CTAAGAGCAATGATGATTGG+TGG | 0.604707 | 7_2:-32752318 | None:intergenic |
AGTATTGGTTTACTAAGAGG+AGG | 0.609608 | 7_2:-32750340 | None:intergenic |
TTTATAGTGACACTATACAT+AGG | 0.612426 | 7_2:+32752294 | Msa1056110:CDS |
AAGTTTAAGTAGTCAAGCCA+AGG | 0.623683 | 7_2:+32752239 | Msa1056110:CDS |
TGTAAGTAGAAGACCACCAA+TGG | 0.628504 | 7_2:-32752394 | None:intergenic |
CAGCACCCTTCATCTCCACA+AGG | 0.628610 | 7_2:+32750143 | Msa1056110:CDS |
AGTAGTCAAGCCAAGGTGGT+GGG | 0.631238 | 7_2:+32752246 | Msa1056110:CDS |
TGGAGATGAAGGGTGCTGGA+AGG | 0.648947 | 7_2:-32750138 | None:intergenic |
CTGATGGCTGAGGAAAGAGT+AGG | 0.662492 | 7_2:-32750539 | None:intergenic |
TTTAAGTAGTCAAGCCAAGG+TGG | 0.670840 | 7_2:+32752242 | Msa1056110:CDS |
AAGCATAAACAACAAAGACA+TGG | 0.700920 | 7_2:-32750093 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTTTTTAATTTTTT+AGG | - | chr7_2:32750785-32750804 | None:intergenic | 0.0% |
!!! | TTTATTTTGCAATTTTAATG+TGG | + | chr7_2:32750447-32750466 | Msa1056110:intron | 15.0% |
!!! | TTAATTGTCATTTTCAATAT+TGG | + | chr7_2:32750759-32750778 | Msa1056110:intron | 15.0% |
!!! | TAATTTTCATTTTACTTTTG+TGG | + | chr7_2:32751006-32751025 | Msa1056110:intron | 15.0% |
!! | CAAATTAACTACTTAAATAA+TGG | - | chr7_2:32751045-32751064 | None:intergenic | 15.0% |
!! | CATTATTTAAGTAGTTAATT+TGG | + | chr7_2:32751043-32751062 | Msa1056110:intron | 15.0% |
!!! | TAAATTTTACCAAACAATAT+AGG | - | chr7_2:32751136-32751155 | None:intergenic | 15.0% |
!!! | TATATTTTTATGTTCGAAAT+TGG | + | chr7_2:32751154-32751173 | Msa1056110:intron | 15.0% |
!!! | ATATTTTTATGTTCGAAATT+GGG | + | chr7_2:32751155-32751174 | Msa1056110:intron | 15.0% |
!! | AAACAAACATATATAAAGAA+CGG | - | chr7_2:32751708-32751727 | None:intergenic | 15.0% |
!! | TTTATATATGTTTGTTTAGA+TGG | + | chr7_2:32751711-32751730 | Msa1056110:intron | 15.0% |
!! | TTAAAAAGAATATATGGAAA+AGG | - | chr7_2:32751966-32751985 | None:intergenic | 15.0% |
!!! | TTTTCTAAGACAATTTTTAA+AGG | + | chr7_2:32752043-32752062 | Msa1056110:intron | 15.0% |
!!! | TTTTCAATTTGGAAATGTTT+TGG | - | chr7_2:32751218-32751237 | None:intergenic | 20.0% |
!! | AACAAACATATATAAAGAAC+GGG | - | chr7_2:32751707-32751726 | None:intergenic | 20.0% |
!! | CTTATGACAAAAATAAGAAT+CGG | + | chr7_2:32752010-32752029 | Msa1056110:intron | 20.0% |
!! | AAATTAAATTGTCCTTGAAA+AGG | + | chr7_2:32752101-32752120 | Msa1056110:intron | 20.0% |
!!! | TCATATTTCATTTTTTCTGT+TGG | + | chr7_2:32752185-32752204 | Msa1056110:intron | 20.0% |
!!! | TTTTTCTGTTGGTTTAATTA+AGG | + | chr7_2:32752196-32752215 | Msa1056110:intron | 20.0% |
! | AAGATATTGTTACAAGGATT+TGG | + | chr7_2:32749982-32750001 | Msa1056110:CDS | 25.0% |
! | AAACCAATACTATGCAAAAT+TGG | + | chr7_2:32750352-32750371 | Msa1056110:CDS | 25.0% |
!!! | CATGATTTCCTTTGTTTTTT+AGG | - | chr7_2:32750686-32750705 | None:intergenic | 25.0% |
! | ATATAATGCATTGTACTTAC+CGG | - | chr7_2:32750855-32750874 | None:intergenic | 25.0% |
! | TACAATGCATTATATATGCA+AGG | + | chr7_2:32750860-32750879 | Msa1056110:intron | 25.0% |
!!! | AATTACCTTTTTTTTTGTGG+TGG | - | chr7_2:32750905-32750924 | None:intergenic | 25.0% |
!!! | GACAATTACCTTTTTTTTTG+TGG | - | chr7_2:32750908-32750927 | None:intergenic | 25.0% |
! | ATAACATAGTTCCGTAAAAA+TGG | - | chr7_2:32751098-32751117 | None:intergenic | 25.0% |
!! | TTTTACCAAACAATATAGGT+AGG | - | chr7_2:32751132-32751151 | None:intergenic | 25.0% |
! | TGGTTAATTCACAAATTCAA+GGG | - | chr7_2:32751198-32751217 | None:intergenic | 25.0% |
! | TTGGTTAATTCACAAATTCA+AGG | - | chr7_2:32751199-32751218 | None:intergenic | 25.0% |
!! | TTGATCAACGATTTTCAATT+TGG | - | chr7_2:32751229-32751248 | None:intergenic | 25.0% |
! | AAAAACTTAGGCAAAATTGT+TGG | - | chr7_2:32751373-32751392 | None:intergenic | 25.0% |
!! | GACAATTTAATTTCTTGTGT+GGG | - | chr7_2:32752094-32752113 | None:intergenic | 25.0% |
! | TTAATTAAGGATGGAAAAAG+TGG | + | chr7_2:32752209-32752228 | Msa1056110:intron | 25.0% |
! | TTTATAGTGACACTATACAT+AGG | + | chr7_2:32752294-32752313 | Msa1056110:CDS | 25.0% |
! | AGTATATATTAGTTCCCTTA+TGG | + | chr7_2:32752421-32752440 | Msa1056110:CDS | 25.0% |
!!! | TACAAACTCATTTTAGTTCT+TGG | + | chr7_2:32752511-32752530 | Msa1056110:intron | 25.0% |
! | ATCAATTTCATGAATATGGA+AGG | - | chr7_2:32752717-32752736 | None:intergenic | 25.0% |
! | TGCTATCAATTTCATGAATA+TGG | - | chr7_2:32752721-32752740 | None:intergenic | 25.0% |
!!! | AAAAACCTTTTTTCTTGTAG+TGG | - | chr7_2:32752766-32752785 | None:intergenic | 25.0% |
AAGCATAAACAACAAAGACA+TGG | - | chr7_2:32750096-32750115 | None:intergenic | 30.0% | |
!!! | TTTTTTCTCTACTAACCTTG+TGG | - | chr7_2:32750161-32750180 | None:intergenic | 30.0% |
GAGACGATGTAAAAAGTTTA+GGG | - | chr7_2:32750224-32750243 | None:intergenic | 30.0% | |
TGAGACGATGTAAAAAGTTT+AGG | - | chr7_2:32750225-32750244 | None:intergenic | 30.0% | |
!! | CATAGTATTGGTTTACTAAG+AGG | - | chr7_2:32750346-32750365 | None:intergenic | 30.0% |
! | AGACCAATTTTGCATAGTAT+TGG | - | chr7_2:32750358-32750377 | None:intergenic | 30.0% |
!! | TATGCAAAATTGGTCTTCTT+GGG | + | chr7_2:32750362-32750381 | Msa1056110:CDS | 30.0% |
AGAAGTTCATCTCAAATCAT+GGG | + | chr7_2:32750491-32750510 | Msa1056110:intron | 30.0% | |
AAGAAGAAACCTGAAAATGA+TGG | - | chr7_2:32750597-32750616 | None:intergenic | 30.0% | |
TAGTATGTGTAATGTTTGCT+TGG | - | chr7_2:32750737-32750756 | None:intergenic | 30.0% | |
!! | TCCATCTATGACCATTTTTA+CGG | + | chr7_2:32751084-32751103 | Msa1056110:intron | 30.0% |
TTCAACCTACCTATATTGTT+TGG | + | chr7_2:32751124-32751143 | Msa1056110:intron | 30.0% | |
GGTTAATTCACAAATTCAAG+GGG | - | chr7_2:32751197-32751216 | None:intergenic | 30.0% | |
AGTATAAGACCCTTGAATTT+GGG | - | chr7_2:32751309-32751328 | None:intergenic | 30.0% | |
TAGTATAAGACCCTTGAATT+TGG | - | chr7_2:32751310-32751329 | None:intergenic | 30.0% | |
ATGCTAAGAACACTAGTTAT+GGG | - | chr7_2:32751682-32751701 | None:intergenic | 30.0% | |
!! | GTTTGTTTAGATGGATTGAT+AGG | + | chr7_2:32751720-32751739 | Msa1056110:intron | 30.0% |
!! | CAGACATTTTAATCAGTGTA+TGG | + | chr7_2:32751752-32751771 | Msa1056110:intron | 30.0% |
! | CTTTTATTAGGATCTACATG+TGG | - | chr7_2:32751840-32751859 | None:intergenic | 30.0% |
!! | GATCCTAATAAAAGCATCAA+TGG | + | chr7_2:32751846-32751865 | Msa1056110:intron | 30.0% |
! | ACACCATTGATGCTTTTATT+AGG | - | chr7_2:32751852-32751871 | None:intergenic | 30.0% |
CTATGACAATTCAATGAGTT+TGG | + | chr7_2:32751883-32751902 | Msa1056110:intron | 30.0% | |
! | GGACAATTTAATTTCTTGTG+TGG | - | chr7_2:32752095-32752114 | None:intergenic | 30.0% |
! | TTCTTATAGCTACCTTTTCA+AGG | - | chr7_2:32752116-32752135 | None:intergenic | 30.0% |
!! | TCTGTTGGTTTAATTAAGGA+TGG | + | chr7_2:32752200-32752219 | Msa1056110:intron | 30.0% |
TTGTACAGGTACAAATTTGT+TGG | + | chr7_2:32752448-32752467 | Msa1056110:intron | 30.0% | |
GGCACTAAGATATTGTTACA+AGG | + | chr7_2:32749976-32749995 | Msa1056110:CDS | 35.0% | |
!! | TACAAGGATTTGGTTCCTTT+TGG | + | chr7_2:32749992-32750011 | Msa1056110:CDS | 35.0% |
!!! | TTTGGTTCCTTTTGGTTTGA+TGG | + | chr7_2:32750000-32750019 | Msa1056110:CDS | 35.0% |
ATGGTAACCATCAAACCAAA+AGG | - | chr7_2:32750010-32750029 | None:intergenic | 35.0% | |
!!! | TTTTGGTTTGATGGTTACCA+TGG | + | chr7_2:32750009-32750028 | Msa1056110:CDS | 35.0% |
ATGGTAACTCATTCCTTTCA+CGG | - | chr7_2:32750077-32750096 | None:intergenic | 35.0% | |
!! | AGTATTGGTTTACTAAGAGG+AGG | - | chr7_2:32750343-32750362 | None:intergenic | 35.0% |
!! | CTATGCAAAATTGGTCTTCT+TGG | + | chr7_2:32750361-32750380 | Msa1056110:CDS | 35.0% |
CAGAAGTTCATCTCAAATCA+TGG | + | chr7_2:32750490-32750509 | Msa1056110:intron | 35.0% | |
! | TCTCAAATCATGGGTTATAC+AGG | + | chr7_2:32750500-32750519 | Msa1056110:CDS | 35.0% |
GAGTTCAGCCTAAAAAACAA+AGG | + | chr7_2:32750675-32750694 | Msa1056110:intron | 35.0% | |
TGCATTATATATGCAAGGTC+CGG | + | chr7_2:32750865-32750884 | Msa1056110:intron | 35.0% | |
TCCGTAAAAATGGTCATAGA+TGG | - | chr7_2:32751088-32751107 | None:intergenic | 35.0% | |
AAATTGGGAATATCCGTCAA+AGG | + | chr7_2:32751170-32751189 | Msa1056110:intron | 35.0% | |
CAAAATCCAAATAATGTGGC+TGG | - | chr7_2:32751275-32751294 | None:intergenic | 35.0% | |
! | CAGCCACATTATTTGGATTT+TGG | + | chr7_2:32751273-32751292 | Msa1056110:intron | 35.0% |
GGTCCAAAATCCAAATAATG+TGG | - | chr7_2:32751279-32751298 | None:intergenic | 35.0% | |
!! | ACCATTTTTGCCCAAATTCA+AGG | + | chr7_2:32751296-32751315 | Msa1056110:intron | 35.0% |
!! | CCATTTTTGCCCAAATTCAA+GGG | + | chr7_2:32751297-32751316 | Msa1056110:intron | 35.0% |
GCAAAATTGTTGGAGTAATG+TGG | - | chr7_2:32751363-32751382 | None:intergenic | 35.0% | |
CATGCTAAGAACACTAGTTA+TGG | - | chr7_2:32751683-32751702 | None:intergenic | 35.0% | |
AATATCTTGCGATAAAGCTG+AGG | - | chr7_2:32751810-32751829 | None:intergenic | 35.0% | |
! | GCATCAATGGTGTTAGAATA+AGG | + | chr7_2:32751859-32751878 | Msa1056110:intron | 35.0% |
AAGTTTAAGTAGTCAAGCCA+AGG | + | chr7_2:32752239-32752258 | Msa1056110:CDS | 35.0% | |
GGTACCATAGTATCTATATC+AGG | + | chr7_2:32752267-32752286 | Msa1056110:CDS | 35.0% | |
TGCTCCTGATATAGATACTA+TGG | - | chr7_2:32752274-32752293 | None:intergenic | 35.0% | |
GATCTAAGAGCAATGATGAT+TGG | - | chr7_2:32752324-32752343 | None:intergenic | 35.0% | |
AATCATCATCAGATCAAAGC+TGG | + | chr7_2:32752370-32752389 | Msa1056110:CDS | 35.0% | |
ATCATCATCAGATCAAAGCT+GGG | + | chr7_2:32752371-32752390 | Msa1056110:CDS | 35.0% | |
ACCTGTACAATGTACCATAA+GGG | - | chr7_2:32752438-32752457 | None:intergenic | 35.0% | |
TACCTGTACAATGTACCATA+AGG | - | chr7_2:32752439-32752458 | None:intergenic | 35.0% | |
!!! | AGGAAACCATTGTTTTTGCA+GGG | - | chr7_2:32752697-32752716 | None:intergenic | 35.0% |
!!! | AAGGAAACCATTGTTTTTGC+AGG | - | chr7_2:32752698-32752717 | None:intergenic | 35.0% |
!!! | CCTTTTTTCTTGTAGTGGAA+GGG | - | chr7_2:32752761-32752780 | None:intergenic | 35.0% |
!!! | ACCTTTTTTCTTGTAGTGGA+AGG | - | chr7_2:32752762-32752781 | None:intergenic | 35.0% |
ACTAACCTTGTGGAGATGAA+GGG | - | chr7_2:32750151-32750170 | None:intergenic | 40.0% | |
TACTAACCTTGTGGAGATGA+AGG | - | chr7_2:32750152-32750171 | None:intergenic | 40.0% | |
ATACCACTGGACTACACTTT+CGG | + | chr7_2:32750249-32750268 | Msa1056110:intron | 40.0% | |
!! | ATTGGTCTTCTTGGGTTGAT+CGG | + | chr7_2:32750370-32750389 | Msa1056110:CDS | 40.0% |
GAAAATGATGGCAAGCAAGA+AGG | - | chr7_2:32750585-32750604 | None:intergenic | 40.0% | |
! | TCTTGCTTGCCATCATTTTC+AGG | + | chr7_2:32750585-32750604 | Msa1056110:CDS | 40.0% |
GCATTATATATGCAAGGTCC+GGG | + | chr7_2:32750866-32750885 | Msa1056110:intron | 40.0% | |
CATTATATATGCAAGGTCCG+GGG | + | chr7_2:32750867-32750886 | Msa1056110:intron | 40.0% | |
!!! | CCTTTTTTTTTGTGGTGGCT+AGG | - | chr7_2:32750900-32750919 | None:intergenic | 40.0% |
CCTAGCCACCACAAAAAAAA+AGG | + | chr7_2:32750897-32750916 | Msa1056110:intron | 40.0% | |
AAATTCAAGGGGTCCTTTGA+CGG | - | chr7_2:32751186-32751205 | None:intergenic | 40.0% | |
CCCTTGAATTTGGGCAAAAA+TGG | - | chr7_2:32751300-32751319 | None:intergenic | 40.0% | |
AATTGTTGGAGTAATGTGGC+TGG | - | chr7_2:32751359-32751378 | None:intergenic | 40.0% | |
AATTCAATGAGTTTGGCCTC+TGG | + | chr7_2:32751890-32751909 | Msa1056110:intron | 40.0% | |
TTTAAGTAGTCAAGCCAAGG+TGG | + | chr7_2:32752242-32752261 | Msa1056110:CDS | 40.0% | |
CTAAGAGCAATGATGATTGG+TGG | - | chr7_2:32752321-32752340 | None:intergenic | 40.0% | |
TGTAAGTAGAAGACCACCAA+TGG | - | chr7_2:32752397-32752416 | None:intergenic | 40.0% | |
TCCCTTATGGTACATTGTAC+AGG | + | chr7_2:32752434-32752453 | Msa1056110:CDS | 40.0% | |
! | AGTGGAAGGGTTTGTTCAAA+TGG | - | chr7_2:32752748-32752767 | None:intergenic | 40.0% |
CCCTTCCACTACAAGAAAAA+AGG | + | chr7_2:32752758-32752777 | Msa1056110:CDS | 40.0% | |
!!! | GCAGCGATATTTTTTTCGCT+GGG | - | chr7_2:32752843-32752862 | None:intergenic | 40.0% |
!!! | TGCAGCGATATTTTTTTCGC+TGG | - | chr7_2:32752844-32752863 | None:intergenic | 40.0% |
AAAATATCGCTGCATGTCGT+TGG | + | chr7_2:32752850-32752869 | Msa1056110:CDS | 40.0% | |
!! | TTAGTTTTCACAGCGACATC+AGG | - | chr7_2:32752910-32752929 | None:intergenic | 40.0% |
AGCAACGTTGATGCATTCCA+TGG | - | chr7_2:32750029-32750048 | None:intergenic | 45.0% | |
TTCAAAGCTGCTACCGTGAA+AGG | + | chr7_2:32750061-32750080 | Msa1056110:CDS | 45.0% | |
ATCGTCTCAACTCATACCAC+TGG | + | chr7_2:32750236-32750255 | Msa1056110:intron | 45.0% | |
!! | TTGGTCTTCTTGGGTTGATC+GGG | + | chr7_2:32750371-32750390 | Msa1056110:CDS | 45.0% |
GCAAGCAAGAAGGTAAAAGC+TGG | - | chr7_2:32750575-32750594 | None:intergenic | 45.0% | |
TGATAGAGCCGTGAACTAGA+CGG | - | chr7_2:32751918-32751937 | None:intergenic | 45.0% | |
CGTTCTCCCTGCAAAAACAA+TGG | + | chr7_2:32752688-32752707 | Msa1056110:intron | 45.0% | |
!! | AAAAAAAAAAAAAAAAACTT+AGG | - | chr7_2:32751385-32751404 | None:intergenic | 5.0% |
!! | ATTTATTTAAAAAGAATATA+TGG | - | chr7_2:32751972-32751991 | None:intergenic | 5.0% |
! | AGTCCGAAAGTGTAGTCCAG+TGG | - | chr7_2:32750255-32750274 | None:intergenic | 50.0% |
CTGATGGCTGAGGAAAGAGT+AGG | - | chr7_2:32750542-32750561 | None:intergenic | 50.0% | |
TTCCTCAGCCATCAGCAACT+TGG | + | chr7_2:32750547-32750566 | Msa1056110:CDS | 50.0% | |
CCAACACATGCTTGCACATG+AGG | - | chr7_2:32750656-32750675 | None:intergenic | 50.0% | |
CCTCATGTGCAAGCATGTGT+TGG | + | chr7_2:32750653-32750672 | Msa1056110:intron | 50.0% | |
CGGTTGAGCTAAACTCACGA+GGG | - | chr7_2:32750835-32750854 | None:intergenic | 50.0% | |
! | CCTCGTGAGTTTAGCTCAAC+CGG | + | chr7_2:32750833-32750852 | Msa1056110:intron | 50.0% |
CGTGTGCCAGCCACATTATT+TGG | + | chr7_2:32751266-32751285 | Msa1056110:intron | 50.0% | |
GATAGAGCCGTGAACTAGAC+GGG | - | chr7_2:32751917-32751936 | None:intergenic | 50.0% | |
AAGTAGTCAAGCCAAGGTGG+TGG | + | chr7_2:32752245-32752264 | Msa1056110:CDS | 50.0% | |
AGTAGTCAAGCCAAGGTGGT+GGG | + | chr7_2:32752246-32752265 | Msa1056110:CDS | 50.0% | |
TACTATGGTACCCACCACCT+TGG | - | chr7_2:32752259-32752278 | None:intergenic | 50.0% | |
TCAGATCAAAGCTGGGCCAT+TGG | + | chr7_2:32752378-32752397 | Msa1056110:CDS | 50.0% | |
!! | TGGAGATGAAGGGTGCTGGA+AGG | - | chr7_2:32750141-32750160 | None:intergenic | 55.0% |
! | CTTGTGGAGATGAAGGGTGC+TGG | - | chr7_2:32750145-32750164 | None:intergenic | 55.0% |
CAGCACCCTTCATCTCCACA+AGG | + | chr7_2:32750143-32750162 | Msa1056110:CDS | 55.0% | |
CACCAAGTTGCTGATGGCTG+AGG | - | chr7_2:32750552-32750571 | None:intergenic | 55.0% | |
AGCTGGCACCAAGTTGCTGA+TGG | - | chr7_2:32750558-32750577 | None:intergenic | 55.0% | |
CCGGTTGAGCTAAACTCACG+AGG | - | chr7_2:32750836-32750855 | None:intergenic | 55.0% | |
GGTGGCTAGGATTTGAACCC+CGG | - | chr7_2:32750887-32750906 | None:intergenic | 55.0% | |
TAATGTGGCTGGCACACGCA+AGG | - | chr7_2:32751264-32751283 | None:intergenic | 55.0% | |
TAATGTGGCTGGCACACGCA+AGG | - | chr7_2:32751264-32751283 | None:intergenic | 55.0% | |
! | CTCTGGACCCGTCTAGTTCA+CGG | + | chr7_2:32751907-32751926 | Msa1056110:intron | 55.0% |
GATCAAAGCTGGGCCATTGG+TGG | + | chr7_2:32752381-32752400 | Msa1056110:CDS | 55.0% | |
CGTGAACTAGACGGGTCCAG+AGG | - | chr7_2:32751909-32751928 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 32749974 | 32752978 | 32749974 | ID=Msa1056110;Name=Msa1056110 |
chr7_2 | mRNA | 32749974 | 32752978 | 32749974 | ID=Msa1056110-mRNA-1;Parent=Msa1056110;Name=Msa1056110-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.25|0|1|1|1|5|0|282 |
chr7_2 | exon | 32749974 | 32750164 | 32749974 | ID=Msa1056110-mRNA-1:exon:6524;Parent=Msa1056110-mRNA-1 |
chr7_2 | exon | 32750327 | 32750392 | 32750327 | ID=Msa1056110-mRNA-1:exon:6525;Parent=Msa1056110-mRNA-1 |
chr7_2 | exon | 32750493 | 32750606 | 32750493 | ID=Msa1056110-mRNA-1:exon:6526;Parent=Msa1056110-mRNA-1 |
chr7_2 | exon | 32752218 | 32752455 | 32752218 | ID=Msa1056110-mRNA-1:exon:6527;Parent=Msa1056110-mRNA-1 |
chr7_2 | exon | 32752739 | 32752978 | 32752739 | ID=Msa1056110-mRNA-1:exon:6528;Parent=Msa1056110-mRNA-1 |
chr7_2 | CDS | 32749974 | 32750164 | 32749974 | ID=Msa1056110-mRNA-1:cds;Parent=Msa1056110-mRNA-1 |
chr7_2 | CDS | 32750327 | 32750392 | 32750327 | ID=Msa1056110-mRNA-1:cds;Parent=Msa1056110-mRNA-1 |
chr7_2 | CDS | 32750493 | 32750606 | 32750493 | ID=Msa1056110-mRNA-1:cds;Parent=Msa1056110-mRNA-1 |
chr7_2 | CDS | 32752218 | 32752455 | 32752218 | ID=Msa1056110-mRNA-1:cds;Parent=Msa1056110-mRNA-1 |
chr7_2 | CDS | 32752739 | 32752978 | 32752739 | ID=Msa1056110-mRNA-1:cds;Parent=Msa1056110-mRNA-1 |
Gene Sequence |
Protein sequence |