Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056240 | XP_013442712.1 | 97.802 | 273 | 6 | 0 | 1 | 273 | 92 | 364 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056240 | sp|Q94JU2|WTR18_ARATH | 56.679 | 277 | 104 | 5 | 1 | 264 | 92 | 365 | 4.61e-100 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056240 | A0A072TH55 | 97.802 | 273 | 6 | 0 | 1 | 273 | 92 | 364 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008210 | Msa1056240 | 0.801969 | 7.005112e-49 | -8.615850e-47 |
| Msa0036140 | Msa1056240 | 0.841398 | 4.868842e-58 | -8.615850e-47 |
| Msa0079070 | Msa1056240 | 0.808765 | 2.636616e-50 | -8.615850e-47 |
| Msa0084080 | Msa1056240 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa0768530 | Msa1056240 | 0.804533 | 2.064254e-49 | -8.615850e-47 |
| Msa0464120 | Msa1056240 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
| Msa1056110 | Msa1056240 | 0.811277 | 7.585999e-51 | -8.615850e-47 |
| Msa1056240 | Msa1110120 | 0.818292 | 2.115284e-52 | -8.615850e-47 |
| Msa1056240 | Msa1129550 | 0.802381 | 5.763500e-49 | -8.615850e-47 |
| Msa1056240 | Msa1225130 | 0.803613 | 3.206749e-49 | -8.615850e-47 |
| Msa1056240 | Msa1331000 | 0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa1056240 | Msa1419960 | 0.804090 | 2.552108e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056240 | MtrunA17_Chr7g0227921 | 97.802 | 273 | 6 | 0 | 1 | 273 | 92 | 364 | 0.0 | 538 |
| Msa1056240 | MtrunA17_Chr6g0451201 | 57.455 | 275 | 111 | 2 | 1 | 273 | 91 | 361 | 3.65e-101 | 299 |
| Msa1056240 | MtrunA17_Chr6g0451211 | 55.072 | 276 | 117 | 3 | 1 | 273 | 95 | 366 | 5.63e-98 | 291 |
| Msa1056240 | MtrunA17_Chr6g0451171 | 55.273 | 275 | 117 | 2 | 1 | 273 | 93 | 363 | 7.02e-98 | 291 |
| Msa1056240 | MtrunA17_Chr6g0451251 | 56.884 | 276 | 112 | 3 | 1 | 273 | 94 | 365 | 4.57e-96 | 286 |
| Msa1056240 | MtrunA17_Chr1g0150151 | 49.621 | 264 | 126 | 4 | 1 | 258 | 93 | 355 | 1.33e-85 | 259 |
| Msa1056240 | MtrunA17_Chr6g0451191 | 52.500 | 240 | 108 | 2 | 34 | 271 | 1 | 236 | 1.76e-85 | 255 |
| Msa1056240 | MtrunA17_Chr6g0451261 | 60.811 | 222 | 80 | 2 | 1 | 218 | 92 | 310 | 6.11e-83 | 266 |
| Msa1056240 | MtrunA17_Chr4g0059311 | 45.946 | 259 | 137 | 2 | 3 | 259 | 95 | 352 | 3.56e-71 | 223 |
| Msa1056240 | MtrunA17_Chr3g0126101 | 45.660 | 265 | 139 | 2 | 1 | 265 | 86 | 345 | 6.80e-71 | 221 |
| Msa1056240 | MtrunA17_Chr5g0413961 | 45.385 | 260 | 138 | 4 | 1 | 259 | 94 | 350 | 3.55e-67 | 212 |
| Msa1056240 | MtrunA17_Chr5g0413951 | 49.153 | 236 | 119 | 1 | 4 | 238 | 91 | 326 | 4.59e-67 | 212 |
| Msa1056240 | MtrunA17_Chr5g0413931 | 43.542 | 271 | 132 | 5 | 4 | 264 | 90 | 349 | 7.29e-66 | 209 |
| Msa1056240 | MtrunA17_Chr5g0413941 | 47.917 | 240 | 116 | 2 | 4 | 238 | 91 | 326 | 4.40e-65 | 207 |
| Msa1056240 | MtrunA17_Chr5g0413921 | 45.076 | 264 | 123 | 6 | 4 | 259 | 91 | 340 | 7.19e-65 | 206 |
| Msa1056240 | MtrunA17_Chr3g0114731 | 37.354 | 257 | 157 | 2 | 3 | 256 | 101 | 356 | 2.50e-49 | 167 |
| Msa1056240 | MtrunA17_Chr1g0160171 | 38.462 | 247 | 150 | 2 | 5 | 249 | 101 | 347 | 1.99e-47 | 162 |
| Msa1056240 | MtrunA17_Chr3g0126091 | 33.969 | 262 | 165 | 3 | 3 | 259 | 97 | 355 | 4.42e-47 | 160 |
| Msa1056240 | MtrunA17_Chr7g0255561 | 35.802 | 243 | 147 | 2 | 3 | 238 | 97 | 337 | 8.21e-46 | 158 |
| Msa1056240 | MtrunA17_Chr7g0255581 | 35.802 | 243 | 147 | 2 | 3 | 238 | 97 | 337 | 8.21e-46 | 158 |
| Msa1056240 | MtrunA17_Chr3g0114691 | 35.458 | 251 | 155 | 3 | 5 | 249 | 105 | 354 | 1.24e-44 | 155 |
| Msa1056240 | MtrunA17_Chr6g0483401 | 35.338 | 266 | 160 | 4 | 5 | 265 | 95 | 353 | 2.61e-44 | 153 |
| Msa1056240 | MtrunA17_Chr3g0081421 | 33.865 | 251 | 160 | 2 | 3 | 247 | 100 | 350 | 5.46e-44 | 153 |
| Msa1056240 | MtrunA17_Chr8g0354121 | 35.317 | 252 | 151 | 6 | 3 | 245 | 96 | 344 | 1.14e-43 | 152 |
| Msa1056240 | MtrunA17_Chr3g0081511 | 35.484 | 248 | 157 | 2 | 3 | 247 | 100 | 347 | 2.95e-43 | 151 |
| Msa1056240 | MtrunA17_Chr1g0160181 | 32.971 | 276 | 173 | 5 | 3 | 266 | 101 | 376 | 8.58e-43 | 150 |
| Msa1056240 | MtrunA17_Chr8g0334761 | 34.749 | 259 | 156 | 4 | 3 | 252 | 94 | 348 | 1.77e-42 | 149 |
| Msa1056240 | MtrunA17_Chr2g0310441 | 32.714 | 269 | 176 | 3 | 5 | 270 | 97 | 363 | 8.13e-41 | 144 |
| Msa1056240 | MtrunA17_Chr6g0451241 | 58.879 | 107 | 44 | 0 | 167 | 273 | 9 | 115 | 3.33e-40 | 135 |
| Msa1056240 | MtrunA17_Chr1g0182291 | 35.169 | 236 | 151 | 2 | 3 | 237 | 98 | 332 | 6.62e-40 | 142 |
| Msa1056240 | MtrunA17_Chr3g0129591 | 29.889 | 271 | 175 | 2 | 5 | 270 | 92 | 352 | 1.26e-39 | 141 |
| Msa1056240 | MtrunA17_Chr4g0073241 | 32.482 | 274 | 161 | 7 | 3 | 270 | 94 | 349 | 4.46e-39 | 140 |
| Msa1056240 | MtrunA17_Chr3g0129571 | 30.579 | 242 | 163 | 1 | 8 | 244 | 97 | 338 | 7.75e-39 | 139 |
| Msa1056240 | MtrunA17_Chr1g0164831 | 32.400 | 250 | 165 | 2 | 5 | 252 | 86 | 333 | 1.09e-38 | 138 |
| Msa1056240 | MtrunA17_Chr7g0263101 | 30.882 | 272 | 172 | 4 | 3 | 267 | 96 | 358 | 5.59e-38 | 137 |
| Msa1056240 | MtrunA17_Chr3g0114711 | 30.333 | 300 | 165 | 6 | 3 | 259 | 97 | 395 | 6.29e-37 | 135 |
| Msa1056240 | MtrunA17_Chr1g0186641 | 31.907 | 257 | 167 | 4 | 3 | 255 | 96 | 348 | 1.16e-36 | 133 |
| Msa1056240 | MtrunA17_Chr3g0142131 | 30.526 | 285 | 168 | 2 | 5 | 259 | 105 | 389 | 2.61e-36 | 133 |
| Msa1056240 | MtrunA17_Chr7g0271561 | 31.373 | 255 | 160 | 4 | 3 | 244 | 90 | 342 | 3.68e-36 | 132 |
| Msa1056240 | MtrunA17_Chr1g0186611 | 30.588 | 255 | 174 | 3 | 3 | 256 | 99 | 351 | 5.29e-36 | 131 |
| Msa1056240 | MtrunA17_Chr8g0334771 | 34.866 | 261 | 162 | 3 | 3 | 261 | 94 | 348 | 1.07e-35 | 131 |
| Msa1056240 | MtrunA17_Chr6g0463971 | 31.873 | 251 | 163 | 3 | 3 | 247 | 98 | 346 | 1.12e-35 | 130 |
| Msa1056240 | MtrunA17_Chr4g0050881 | 33.195 | 241 | 153 | 2 | 3 | 237 | 91 | 329 | 1.85e-35 | 130 |
| Msa1056240 | MtrunA17_Chr3g0129581 | 29.151 | 271 | 177 | 2 | 5 | 270 | 92 | 352 | 7.53e-35 | 128 |
| Msa1056240 | MtrunA17_Chr1g0160111 | 31.136 | 273 | 178 | 5 | 3 | 268 | 90 | 359 | 7.73e-35 | 129 |
| Msa1056240 | MtrunA17_Chr1g0171301 | 31.970 | 269 | 172 | 3 | 1 | 267 | 97 | 356 | 9.15e-35 | 128 |
| Msa1056240 | MtrunA17_Chr2g0278561 | 29.044 | 272 | 176 | 4 | 5 | 264 | 100 | 366 | 1.32e-34 | 128 |
| Msa1056240 | MtrunA17_Chr8g0334751 | 32.932 | 249 | 162 | 3 | 19 | 262 | 111 | 359 | 3.25e-34 | 127 |
| Msa1056240 | MtrunA17_Chr1g0155761 | 31.225 | 253 | 155 | 1 | 5 | 238 | 106 | 358 | 4.71e-34 | 127 |
| Msa1056240 | MtrunA17_Chr2g0332001 | 33.603 | 247 | 159 | 4 | 12 | 256 | 130 | 373 | 5.28e-34 | 127 |
| Msa1056240 | MtrunA17_Chr2g0278551 | 33.865 | 251 | 159 | 3 | 10 | 254 | 102 | 351 | 5.94e-34 | 127 |
| Msa1056240 | MtrunA17_Chr2g0278541 | 28.082 | 292 | 187 | 6 | 3 | 272 | 95 | 385 | 6.89e-34 | 126 |
| Msa1056240 | MtrunA17_Chr3g0129601 | 29.482 | 251 | 173 | 2 | 5 | 251 | 114 | 364 | 7.51e-34 | 126 |
| Msa1056240 | MtrunA17_Chr1g0184221 | 30.078 | 256 | 157 | 3 | 1 | 248 | 111 | 352 | 1.65e-33 | 125 |
| Msa1056240 | MtrunA17_Chr1g0186601 | 31.765 | 255 | 167 | 4 | 3 | 255 | 99 | 348 | 2.18e-33 | 124 |
| Msa1056240 | MtrunA17_Chr1g0186571 | 32.510 | 243 | 156 | 4 | 3 | 241 | 96 | 334 | 8.33e-33 | 123 |
| Msa1056240 | MtrunA17_Chr2g0284261 | 29.921 | 254 | 168 | 2 | 5 | 249 | 93 | 345 | 1.31e-32 | 122 |
| Msa1056240 | MtrunA17_Chr1g0186561 | 32.083 | 240 | 162 | 1 | 3 | 241 | 99 | 338 | 7.77e-32 | 120 |
| Msa1056240 | MtrunA17_Chr2g0290611 | 33.190 | 232 | 150 | 2 | 10 | 237 | 102 | 332 | 4.25e-31 | 118 |
| Msa1056240 | MtrunA17_Chr5g0441761 | 29.787 | 235 | 161 | 2 | 3 | 237 | 97 | 327 | 5.02e-30 | 115 |
| Msa1056240 | MtrunA17_Chr4g0051021 | 29.661 | 236 | 153 | 2 | 10 | 237 | 104 | 334 | 2.02e-29 | 114 |
| Msa1056240 | MtrunA17_Chr8g0383731 | 28.509 | 228 | 156 | 2 | 19 | 239 | 104 | 331 | 4.01e-29 | 113 |
| Msa1056240 | MtrunA17_Chr3g0084091 | 29.752 | 242 | 158 | 3 | 3 | 237 | 13 | 249 | 4.43e-29 | 112 |
| Msa1056240 | MtrunA17_Chr3g0114701 | 30.802 | 237 | 160 | 2 | 5 | 237 | 94 | 330 | 1.91e-28 | 112 |
| Msa1056240 | MtrunA17_Chr5g0408001 | 29.434 | 265 | 169 | 4 | 5 | 252 | 95 | 358 | 2.49e-28 | 111 |
| Msa1056240 | MtrunA17_Chr5g0429001 | 29.046 | 241 | 165 | 1 | 3 | 237 | 34 | 274 | 3.04e-28 | 110 |
| Msa1056240 | MtrunA17_Chr5g0428881 | 28.049 | 246 | 159 | 2 | 3 | 237 | 101 | 339 | 1.74e-27 | 109 |
| Msa1056240 | MtrunA17_Chr5g0407971 | 28.685 | 251 | 160 | 4 | 5 | 238 | 96 | 344 | 2.51e-27 | 108 |
| Msa1056240 | MtrunA17_Chr5g0408041 | 27.915 | 283 | 179 | 6 | 5 | 265 | 96 | 375 | 8.06e-27 | 107 |
| Msa1056240 | MtrunA17_Chr5g0408031 | 27.240 | 279 | 183 | 4 | 5 | 264 | 95 | 372 | 3.83e-26 | 105 |
| Msa1056240 | MtrunA17_Chr4g0050891 | 28.571 | 238 | 156 | 2 | 5 | 232 | 98 | 331 | 5.64e-26 | 104 |
| Msa1056240 | MtrunA17_Chr5g0407991 | 26.429 | 280 | 186 | 5 | 5 | 267 | 94 | 370 | 1.06e-25 | 104 |
| Msa1056240 | MtrunA17_Chr4g0050941 | 28.629 | 248 | 155 | 4 | 5 | 237 | 98 | 338 | 2.08e-25 | 103 |
| Msa1056240 | MtrunA17_Chr4g0050931 | 29.018 | 224 | 147 | 3 | 24 | 237 | 77 | 298 | 1.70e-23 | 97.4 |
| Msa1056240 | MtrunA17_Chr8g0369841 | 27.778 | 252 | 161 | 5 | 5 | 238 | 94 | 342 | 8.31e-23 | 96.3 |
| Msa1056240 | MtrunA17_Chr5g0404811 | 27.885 | 208 | 147 | 1 | 33 | 237 | 6 | 213 | 4.93e-22 | 92.0 |
| Msa1056240 | MtrunA17_Chr1g0177221 | 30.000 | 160 | 107 | 3 | 3 | 159 | 101 | 258 | 7.85e-22 | 92.0 |
| Msa1056240 | MtrunA17_Chr1g0211801 | 34.194 | 155 | 92 | 2 | 5 | 153 | 94 | 244 | 3.84e-20 | 87.4 |
| Msa1056240 | MtrunA17_Chr8g0334721 | 32.653 | 147 | 88 | 3 | 131 | 266 | 1 | 147 | 1.59e-19 | 83.2 |
| Msa1056240 | MtrunA17_Chr4g0051001 | 29.048 | 210 | 145 | 2 | 10 | 215 | 121 | 330 | 1.82e-19 | 86.3 |
| Msa1056240 | MtrunA17_Chr6g0451231 | 54.878 | 82 | 31 | 2 | 34 | 113 | 1 | 78 | 2.11e-19 | 80.9 |
| Msa1056240 | MtrunA17_Chr2g0278021 | 27.801 | 241 | 157 | 3 | 34 | 266 | 1 | 232 | 5.41e-19 | 84.3 |
| Msa1056240 | MtrunA17_Chr5g0399281 | 25.468 | 267 | 174 | 5 | 5 | 257 | 93 | 348 | 1.28e-18 | 84.3 |
| Msa1056240 | MtrunA17_Chr4g0056081 | 26.616 | 263 | 172 | 8 | 5 | 254 | 100 | 354 | 7.21e-17 | 79.3 |
| Msa1056240 | MtrunA17_Chr1g0177231 | 36.559 | 93 | 57 | 1 | 165 | 257 | 28 | 118 | 1.48e-16 | 74.3 |
| Msa1056240 | MtrunA17_Chr8g0334711 | 37.500 | 112 | 69 | 1 | 3 | 113 | 93 | 204 | 3.25e-16 | 75.5 |
| Msa1056240 | MtrunA17_Chr1g0150651 | 50.000 | 84 | 37 | 3 | 34 | 113 | 1 | 83 | 1.02e-15 | 70.9 |
| Msa1056240 | MtrunA17_Chr1g0172891 | 36.585 | 82 | 50 | 1 | 176 | 257 | 17 | 96 | 2.21e-15 | 70.9 |
| Msa1056240 | MtrunA17_Chr8g0334731 | 37.931 | 116 | 65 | 3 | 3 | 113 | 75 | 188 | 4.12e-14 | 69.3 |
| Msa1056240 | MtrunA17_Chr4g0050911 | 30.986 | 142 | 81 | 3 | 5 | 136 | 16 | 150 | 2.57e-13 | 66.2 |
| Msa1056240 | MtrunA17_Chr1g0182261 | 32.593 | 135 | 87 | 4 | 107 | 238 | 78 | 211 | 4.54e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1056240 | AT3G28050.1 | 56.679 | 277 | 104 | 5 | 1 | 264 | 92 | 365 | 4.69e-101 | 300 |
| Msa1056240 | AT5G40240.1 | 51.793 | 251 | 115 | 2 | 2 | 247 | 101 | 350 | 8.88e-89 | 268 |
| Msa1056240 | AT5G40240.3 | 51.793 | 251 | 115 | 2 | 2 | 247 | 101 | 350 | 8.88e-89 | 268 |
| Msa1056240 | AT5G40240.2 | 51.793 | 251 | 115 | 2 | 2 | 247 | 115 | 364 | 2.09e-88 | 268 |
| Msa1056240 | AT5G40230.1 | 50.186 | 269 | 123 | 3 | 1 | 264 | 101 | 363 | 1.41e-86 | 263 |
| Msa1056240 | AT4G15540.1 | 52.033 | 246 | 109 | 1 | 2 | 247 | 98 | 334 | 1.34e-76 | 236 |
| Msa1056240 | AT4G15540.2 | 52.033 | 246 | 109 | 1 | 2 | 247 | 98 | 334 | 1.34e-76 | 236 |
| Msa1056240 | AT3G28070.2 | 47.232 | 271 | 128 | 6 | 2 | 265 | 6 | 268 | 9.75e-74 | 226 |
| Msa1056240 | AT3G28130.5 | 47.970 | 271 | 125 | 6 | 2 | 265 | 8 | 269 | 6.04e-73 | 224 |
| Msa1056240 | AT3G28130.1 | 47.970 | 271 | 125 | 6 | 2 | 265 | 8 | 269 | 6.04e-73 | 224 |
| Msa1056240 | AT3G28070.1 | 47.232 | 271 | 128 | 6 | 2 | 265 | 98 | 360 | 1.49e-72 | 226 |
| Msa1056240 | AT3G28130.2 | 47.985 | 273 | 122 | 7 | 2 | 265 | 94 | 355 | 5.32e-72 | 225 |
| Msa1056240 | AT5G40210.1 | 43.346 | 263 | 132 | 3 | 1 | 262 | 93 | 339 | 1.58e-69 | 218 |
| Msa1056240 | AT3G28080.5 | 46.296 | 270 | 133 | 5 | 2 | 265 | 6 | 269 | 2.13e-69 | 216 |
| Msa1056240 | AT3G28080.7 | 46.296 | 270 | 133 | 5 | 2 | 265 | 6 | 269 | 2.13e-69 | 216 |
| Msa1056240 | AT3G28080.8 | 46.296 | 270 | 133 | 5 | 2 | 265 | 6 | 269 | 2.13e-69 | 216 |
| Msa1056240 | AT3G28080.6 | 46.296 | 270 | 133 | 5 | 2 | 265 | 6 | 269 | 2.13e-69 | 216 |
| Msa1056240 | AT3G28080.2 | 46.296 | 270 | 133 | 5 | 2 | 265 | 87 | 350 | 1.26e-68 | 216 |
| Msa1056240 | AT3G28080.1 | 46.296 | 270 | 133 | 5 | 2 | 265 | 95 | 358 | 1.68e-68 | 216 |
| Msa1056240 | AT3G28100.1 | 49.590 | 244 | 112 | 4 | 2 | 238 | 95 | 334 | 1.09e-66 | 211 |
| Msa1056240 | AT3G28070.3 | 47.511 | 221 | 105 | 4 | 2 | 215 | 98 | 314 | 3.56e-57 | 186 |
| Msa1056240 | AT3G28130.3 | 44.770 | 239 | 116 | 6 | 34 | 265 | 1 | 230 | 2.15e-55 | 178 |
| Msa1056240 | AT3G28070.5 | 43.515 | 239 | 120 | 6 | 34 | 265 | 1 | 231 | 4.28e-55 | 177 |
| Msa1056240 | AT3G28080.9 | 43.277 | 238 | 123 | 5 | 34 | 265 | 1 | 232 | 9.01e-53 | 172 |
| Msa1056240 | AT4G08300.1 | 35.271 | 258 | 160 | 2 | 3 | 253 | 93 | 350 | 1.22e-48 | 165 |
| Msa1056240 | AT1G21890.1 | 38.247 | 251 | 143 | 2 | 3 | 242 | 93 | 342 | 4.28e-48 | 164 |
| Msa1056240 | AT3G28080.4 | 39.405 | 269 | 99 | 5 | 2 | 265 | 6 | 215 | 1.61e-47 | 158 |
| Msa1056240 | AT2G39510.1 | 34.191 | 272 | 175 | 3 | 3 | 272 | 90 | 359 | 2.70e-47 | 162 |
| Msa1056240 | AT1G44800.1 | 36.134 | 238 | 151 | 1 | 3 | 239 | 93 | 330 | 7.04e-47 | 160 |
| Msa1056240 | AT3G28080.3 | 39.405 | 269 | 99 | 5 | 2 | 265 | 95 | 304 | 1.03e-46 | 158 |
| Msa1056240 | AT1G70260.1 | 34.733 | 262 | 161 | 2 | 1 | 254 | 95 | 354 | 5.72e-46 | 158 |
| Msa1056240 | AT4G08290.1 | 32.331 | 266 | 177 | 1 | 2 | 264 | 94 | 359 | 8.99e-45 | 155 |
| Msa1056240 | AT1G60050.1 | 33.210 | 271 | 166 | 5 | 1 | 257 | 96 | 365 | 1.44e-44 | 155 |
| Msa1056240 | AT3G30340.1 | 35.833 | 240 | 144 | 2 | 5 | 238 | 95 | 330 | 1.25e-42 | 149 |
| Msa1056240 | AT5G07050.1 | 35.458 | 251 | 145 | 4 | 3 | 240 | 100 | 346 | 1.03e-41 | 148 |
| Msa1056240 | AT2G37460.1 | 32.463 | 268 | 177 | 3 | 3 | 268 | 97 | 362 | 6.73e-39 | 140 |
| Msa1056240 | AT3G28130.4 | 48.810 | 168 | 78 | 3 | 2 | 163 | 94 | 259 | 1.37e-38 | 136 |
| Msa1056240 | AT3G28100.3 | 47.929 | 169 | 78 | 3 | 2 | 163 | 95 | 260 | 7.32e-38 | 134 |
| Msa1056240 | AT1G21890.2 | 37.553 | 237 | 135 | 3 | 3 | 227 | 93 | 328 | 1.79e-37 | 135 |
| Msa1056240 | AT4G30420.1 | 30.224 | 268 | 185 | 2 | 5 | 270 | 86 | 353 | 3.87e-37 | 135 |
| Msa1056240 | AT4G30420.2 | 30.224 | 268 | 185 | 2 | 5 | 270 | 96 | 363 | 5.17e-37 | 135 |
| Msa1056240 | AT3G53210.2 | 34.167 | 240 | 148 | 4 | 5 | 238 | 37 | 272 | 2.57e-36 | 131 |
| Msa1056240 | AT3G18200.2 | 32.157 | 255 | 172 | 1 | 5 | 259 | 119 | 372 | 3.24e-36 | 133 |
| Msa1056240 | AT3G53210.1 | 34.167 | 240 | 148 | 4 | 5 | 238 | 94 | 329 | 1.29e-35 | 131 |
| Msa1056240 | AT1G09380.1 | 32.489 | 237 | 155 | 1 | 3 | 234 | 90 | 326 | 2.01e-35 | 130 |
| Msa1056240 | AT3G56620.1 | 33.621 | 232 | 151 | 3 | 3 | 234 | 93 | 321 | 1.14e-34 | 129 |
| Msa1056240 | AT2G37450.2 | 32.443 | 262 | 164 | 3 | 5 | 254 | 72 | 332 | 2.08e-34 | 127 |
| Msa1056240 | AT2G37450.3 | 34.764 | 233 | 150 | 2 | 6 | 237 | 1 | 232 | 2.51e-34 | 125 |
| Msa1056240 | AT1G75500.1 | 29.412 | 255 | 172 | 1 | 5 | 251 | 104 | 358 | 9.43e-34 | 126 |
| Msa1056240 | AT1G75500.2 | 29.412 | 255 | 172 | 1 | 5 | 251 | 104 | 358 | 9.43e-34 | 126 |
| Msa1056240 | AT5G64700.1 | 31.967 | 244 | 152 | 2 | 6 | 238 | 93 | 333 | 5.72e-33 | 124 |
| Msa1056240 | AT1G68170.1 | 31.102 | 254 | 171 | 1 | 4 | 253 | 86 | 339 | 1.20e-32 | 123 |
| Msa1056240 | AT1G68170.2 | 31.102 | 254 | 171 | 1 | 4 | 253 | 96 | 349 | 1.50e-32 | 123 |
| Msa1056240 | AT2G40900.1 | 32.258 | 248 | 161 | 4 | 3 | 249 | 93 | 334 | 2.40e-32 | 123 |
| Msa1056240 | AT4G28040.1 | 31.907 | 257 | 152 | 5 | 3 | 251 | 92 | 333 | 3.90e-32 | 121 |
| Msa1056240 | AT4G28040.5 | 31.907 | 257 | 152 | 5 | 3 | 251 | 92 | 333 | 3.90e-32 | 121 |
| Msa1056240 | AT4G28040.3 | 31.907 | 257 | 152 | 5 | 3 | 251 | 92 | 333 | 3.90e-32 | 121 |
| Msa1056240 | AT4G28040.4 | 31.907 | 257 | 152 | 5 | 3 | 251 | 92 | 333 | 3.90e-32 | 121 |
| Msa1056240 | AT4G28040.2 | 31.907 | 257 | 152 | 5 | 3 | 251 | 92 | 333 | 3.90e-32 | 121 |
| Msa1056240 | AT3G18200.1 | 31.276 | 243 | 166 | 1 | 17 | 259 | 1 | 242 | 7.37e-32 | 118 |
| Msa1056240 | AT5G13670.1 | 31.535 | 241 | 159 | 3 | 3 | 238 | 90 | 329 | 2.97e-31 | 119 |
| Msa1056240 | AT5G45370.6 | 30.877 | 285 | 165 | 9 | 5 | 264 | 2 | 279 | 1.45e-30 | 115 |
| Msa1056240 | AT5G45370.5 | 30.877 | 285 | 165 | 9 | 5 | 264 | 2 | 279 | 1.45e-30 | 115 |
| Msa1056240 | AT1G01070.2 | 30.085 | 236 | 162 | 2 | 5 | 237 | 53 | 288 | 1.85e-30 | 116 |
| Msa1056240 | AT4G01430.1 | 28.832 | 274 | 187 | 5 | 5 | 273 | 93 | 363 | 5.29e-30 | 116 |
| Msa1056240 | AT1G01070.1 | 30.085 | 236 | 162 | 2 | 5 | 237 | 100 | 335 | 5.40e-30 | 116 |
| Msa1056240 | AT5G45370.2 | 30.877 | 285 | 165 | 9 | 5 | 264 | 104 | 381 | 1.04e-29 | 115 |
| Msa1056240 | AT5G45370.4 | 30.877 | 285 | 165 | 9 | 5 | 264 | 104 | 381 | 1.04e-29 | 115 |
| Msa1056240 | AT5G45370.1 | 30.597 | 268 | 164 | 8 | 5 | 264 | 104 | 357 | 1.30e-29 | 115 |
| Msa1056240 | AT1G43650.1 | 29.694 | 229 | 159 | 1 | 21 | 249 | 107 | 333 | 1.43e-29 | 114 |
| Msa1056240 | AT1G11450.1 | 30.268 | 261 | 163 | 5 | 5 | 254 | 8 | 260 | 6.70e-29 | 110 |
| Msa1056240 | AT1G11460.1 | 30.802 | 237 | 158 | 3 | 5 | 237 | 100 | 334 | 1.29e-28 | 112 |
| Msa1056240 | AT1G11450.2 | 30.268 | 261 | 163 | 5 | 5 | 254 | 49 | 301 | 1.90e-28 | 110 |
| Msa1056240 | AT1G11450.5 | 30.268 | 261 | 163 | 5 | 5 | 254 | 56 | 308 | 2.60e-28 | 110 |
| Msa1056240 | AT1G11450.3 | 30.268 | 261 | 163 | 5 | 5 | 254 | 100 | 352 | 3.85e-28 | 110 |
| Msa1056240 | AT3G28100.2 | 51.181 | 127 | 53 | 2 | 2 | 122 | 95 | 218 | 1.12e-27 | 107 |
| Msa1056240 | AT1G25270.1 | 29.688 | 256 | 169 | 3 | 5 | 253 | 87 | 338 | 2.20e-27 | 108 |
| Msa1056240 | AT4G01440.1 | 25.806 | 248 | 176 | 4 | 5 | 246 | 94 | 339 | 3.83e-27 | 108 |
| Msa1056240 | AT3G28130.6 | 52.101 | 119 | 50 | 2 | 2 | 115 | 94 | 210 | 9.74e-26 | 101 |
| Msa1056240 | AT4G19185.2 | 25.263 | 285 | 186 | 6 | 5 | 267 | 27 | 306 | 2.64e-25 | 102 |
| Msa1056240 | AT4G19185.1 | 25.263 | 285 | 186 | 6 | 5 | 267 | 105 | 384 | 6.94e-25 | 102 |
| Msa1056240 | AT3G28060.1 | 42.623 | 122 | 68 | 2 | 95 | 215 | 34 | 154 | 9.08e-25 | 97.1 |
| Msa1056240 | AT3G30340.2 | 37.255 | 153 | 86 | 2 | 5 | 151 | 95 | 243 | 1.12e-24 | 100 |
| Msa1056240 | AT2G37450.1 | 33.010 | 206 | 136 | 2 | 33 | 237 | 61 | 265 | 6.35e-24 | 98.6 |
| Msa1056240 | AT4G08290.2 | 34.783 | 161 | 102 | 1 | 2 | 159 | 94 | 254 | 6.83e-24 | 98.2 |
| Msa1056240 | AT4G01440.5 | 25.000 | 220 | 160 | 3 | 20 | 236 | 1 | 218 | 3.57e-23 | 95.5 |
| Msa1056240 | AT4G01440.2 | 25.000 | 220 | 160 | 3 | 20 | 236 | 1 | 218 | 3.57e-23 | 95.5 |
| Msa1056240 | AT4G01440.3 | 25.806 | 217 | 156 | 3 | 5 | 218 | 94 | 308 | 1.79e-22 | 95.1 |
| Msa1056240 | AT4G01430.2 | 30.275 | 218 | 147 | 4 | 5 | 217 | 93 | 310 | 3.39e-22 | 94.4 |
| Msa1056240 | AT4G24980.1 | 28.870 | 239 | 120 | 6 | 3 | 238 | 48 | 239 | 6.39e-22 | 92.4 |
| Msa1056240 | AT3G45870.1 | 25.000 | 240 | 167 | 2 | 5 | 232 | 96 | 334 | 1.84e-21 | 93.2 |
| Msa1056240 | AT1G11450.4 | 29.545 | 220 | 138 | 4 | 5 | 215 | 100 | 311 | 1.46e-20 | 89.7 |
| Msa1056240 | AT3G53210.3 | 34.839 | 155 | 91 | 4 | 5 | 153 | 94 | 244 | 2.63e-20 | 88.2 |
| Msa1056240 | AT5G45370.3 | 29.020 | 255 | 149 | 9 | 35 | 264 | 74 | 321 | 1.34e-19 | 87.0 |
| Msa1056240 | AT5G47470.2 | 25.651 | 269 | 164 | 6 | 5 | 257 | 143 | 391 | 1.96e-19 | 87.4 |
| Msa1056240 | AT5G47470.1 | 25.651 | 269 | 164 | 6 | 5 | 257 | 115 | 363 | 2.35e-19 | 87.0 |
| Msa1056240 | AT4G01430.3 | 25.328 | 229 | 164 | 4 | 49 | 273 | 1 | 226 | 2.57e-18 | 82.0 |
| Msa1056240 | AT5G64700.2 | 32.353 | 170 | 101 | 2 | 5 | 163 | 92 | 258 | 6.52e-18 | 81.6 |
| Msa1056240 | AT4G01440.4 | 30.667 | 150 | 99 | 3 | 5 | 151 | 94 | 241 | 8.21e-18 | 81.3 |
| Msa1056240 | AT5G47470.3 | 25.287 | 261 | 159 | 6 | 5 | 249 | 143 | 383 | 1.37e-17 | 82.0 |
| Msa1056240 | AT3G45870.8 | 23.556 | 225 | 159 | 2 | 5 | 217 | 96 | 319 | 1.57e-16 | 78.6 |
| Msa1056240 | AT4G16620.1 | 23.221 | 267 | 171 | 6 | 5 | 254 | 97 | 346 | 8.06e-15 | 73.9 |
| Msa1056240 | AT4G16620.4 | 24.111 | 253 | 159 | 5 | 6 | 241 | 1 | 237 | 1.15e-14 | 72.4 |
| Msa1056240 | AT4G16620.2 | 24.111 | 253 | 159 | 5 | 6 | 241 | 1 | 237 | 1.15e-14 | 72.4 |
| Msa1056240 | AT4G01450.2 | 24.096 | 249 | 180 | 2 | 5 | 250 | 94 | 336 | 1.16e-14 | 73.6 |
| Msa1056240 | AT4G01450.3 | 32.773 | 119 | 71 | 2 | 5 | 120 | 94 | 206 | 1.24e-13 | 69.3 |
| Msa1056240 | AT4G01450.1 | 23.364 | 214 | 155 | 2 | 5 | 215 | 94 | 301 | 1.56e-13 | 70.1 |
| Msa1056240 | AT4G01450.4 | 32.773 | 119 | 71 | 2 | 5 | 120 | 94 | 206 | 1.72e-13 | 68.9 |
| Msa1056240 | AT3G45870.5 | 22.642 | 212 | 151 | 2 | 33 | 232 | 49 | 259 | 3.51e-13 | 68.9 |
| Msa1056240 | AT1G43650.2 | 31.690 | 142 | 95 | 1 | 21 | 162 | 107 | 246 | 7.98e-13 | 67.4 |
| Msa1056240 | AT3G45870.9 | 27.206 | 136 | 87 | 1 | 5 | 128 | 96 | 231 | 3.32e-12 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGATGCAAATGTATAAA+AGG | 0.206882 | 7_2:+33234556 | Msa1056240:exon |
| CTATGCAAAATTGGTCTTCT+TGG | 0.222542 | 7_2:+33231116 | Msa1056240:five_prime_UTR |
| AAGATCACTGTTAGTTCATT+TGG | 0.241737 | 7_2:-33233415 | None:intergenic |
| TTACTAACTACTCACTTTAG+AGG | 0.241945 | 7_2:-33234588 | None:intergenic |
| TGCATATGTGCTACGTATAA+AGG | 0.248399 | 7_2:+33233669 | Msa1056240:CDS |
| ACCGTTGATAAATAGATTAA+TGG | 0.261225 | 7_2:-33234678 | None:intergenic |
| GTAAAGTTTGATTGAGGTTA+AGG | 0.267281 | 7_2:-33230705 | None:intergenic |
| GTCTATTGTACAAAGGCATT+TGG | 0.270595 | 7_2:+33234944 | Msa1056240:three_prime_UTR |
| TACAAGGATTTGGTTCCTTT+TGG | 0.276744 | 7_2:+33230759 | Msa1056240:five_prime_UTR |
| TTGTAGTGGAAGTGTGAATA+AGG | 0.279863 | 7_2:-33230668 | None:intergenic |
| AAGATATTGTTACAAGGATT+TGG | 0.289371 | 7_2:+33230749 | Msa1056240:five_prime_UTR |
| AGATGAGCCTTGTCCGTATC+AGG | 0.289726 | 7_2:+33234717 | Msa1056240:three_prime_UTR |
| CTATGGGAGTTGTGTTCCTT+GGG | 0.307563 | 7_2:+33233743 | Msa1056240:CDS |
| ATAGTCACACATGTGTATAT+TGG | 0.317744 | 7_2:-33234898 | None:intergenic |
| TGATAGAGTACAAAAGAAAA+TGG | 0.322163 | 7_2:+33234538 | Msa1056240:CDS |
| AAACCAATACTATGCAAAAT+TGG | 0.339357 | 7_2:+33231107 | Msa1056240:five_prime_UTR |
| GCTATGGGAGTTGTGTTCCT+TGG | 0.340738 | 7_2:+33233742 | Msa1056240:CDS |
| AGTATATATTAGTTCCCTTA+TGG | 0.340842 | 7_2:+33233254 | Msa1056240:CDS |
| GGAGCCACAATAATATCAAT+TGG | 0.341846 | 7_2:+33234407 | Msa1056240:CDS |
| GCTAGCAACTTCTGCAAGTT+GGG | 0.348074 | 7_2:+33234871 | Msa1056240:three_prime_UTR |
| AATGCAAGTGCATGGAAAAT+AGG | 0.350999 | 7_2:+33233496 | Msa1056240:CDS |
| TATGCAAAATTGGTCTTCTT+GGG | 0.365472 | 7_2:+33231117 | Msa1056240:five_prime_UTR |
| CAGAAGTTCATCTCAGATCA+TGG | 0.367144 | 7_2:+33231246 | Msa1056240:exon |
| GCAAATGTATAAAAGGGATT+TGG | 0.374996 | 7_2:+33234563 | Msa1056240:exon |
| AATTGTCATTGCTGTGGCTA+TGG | 0.375954 | 7_2:+33233726 | Msa1056240:CDS |
| TGCTCCTGATATAGATACTA+TGG | 0.377453 | 7_2:-33233104 | None:intergenic |
| ATACACATGTGTGACTATAA+AGG | 0.382430 | 7_2:+33234903 | Msa1056240:three_prime_UTR |
| ATGTTCCCCTAGTCCCTAGA+TGG | 0.387952 | 7_2:-33234751 | None:intergenic |
| GCATATGTGCTACGTATAAA+GGG | 0.394947 | 7_2:+33233670 | Msa1056240:CDS |
| AGGAGAGTTTCTACCCATCT+AGG | 0.402465 | 7_2:+33234737 | Msa1056240:three_prime_UTR |
| TTGGTCTTCTTGGGTTGATC+GGG | 0.412468 | 7_2:+33231126 | Msa1056240:five_prime_UTR |
| TCTATTGTACAAAGGCATTT+GGG | 0.422992 | 7_2:+33234945 | Msa1056240:three_prime_UTR |
| TCTCAGATCATGGGTTATAC+AGG | 0.434580 | 7_2:+33231256 | Msa1056240:exon |
| CATAGTATTGGTTTACTAAG+AGG | 0.434696 | 7_2:-33231098 | None:intergenic |
| GGTACCATAGTATCTATATC+AGG | 0.442799 | 7_2:+33233100 | Msa1056240:CDS |
| AGCTAGCAACTTCTGCAAGT+TGG | 0.442946 | 7_2:+33234870 | Msa1056240:three_prime_UTR |
| ATTGGTCTTCTTGGGTTGAT+CGG | 0.449307 | 7_2:+33231125 | Msa1056240:five_prime_UTR |
| TACTAACCTTGTGGAGATGA+AGG | 0.451898 | 7_2:-33230916 | None:intergenic |
| AATCATCATCAGATCAAAGC+TGG | 0.457498 | 7_2:+33233203 | Msa1056240:CDS |
| ATTGTCATTGCTGTGGCTAT+GGG | 0.457527 | 7_2:+33233727 | Msa1056240:CDS |
| ATGGATGCAAATGTATAAAA+GGG | 0.459442 | 7_2:+33234557 | Msa1056240:exon |
| GAGCCACAATAATATCAATT+GGG | 0.460525 | 7_2:+33234408 | Msa1056240:CDS |
| TCTGTGTAGTTTGTGTTTCG+TGG | 0.460635 | 7_2:-33234487 | None:intergenic |
| TTCCTCAGCAATCAGCAACT+TGG | 0.463341 | 7_2:+33231303 | Msa1056240:CDS |
| TACCTGTACAATGTACCATA+AGG | 0.465976 | 7_2:-33233269 | None:intergenic |
| TTCAAAGCTGCTACCGTGAA+AGG | 0.466886 | 7_2:+33230828 | Msa1056240:five_prime_UTR |
| CATCATAACAACATCATCAT+TGG | 0.467097 | 7_2:-33234640 | None:intergenic |
| TTAGTAAAATGACAAAATCA+AGG | 0.480080 | 7_2:+33234604 | Msa1056240:three_prime_UTR |
| TTTCTACCCATCTAGGGACT+AGG | 0.491754 | 7_2:+33234744 | Msa1056240:three_prime_UTR |
| TCCCTTATGGTACATTGTAC+AGG | 0.496069 | 7_2:+33233267 | Msa1056240:CDS |
| GATCTAAGAGCAATGATGAT+TGG | 0.500241 | 7_2:-33233154 | None:intergenic |
| AAGAAGAAACCTGAAAATGA+TGG | 0.507022 | 7_2:-33231350 | None:intergenic |
| AATTTGTGTTGTTTGCTACA+TGG | 0.508836 | 7_2:-33234827 | None:intergenic |
| ATGGTAACTCATTCCTTTCA+CGG | 0.511389 | 7_2:-33230841 | None:intergenic |
| GTTTCATAGCTTTGCAAGAG+AGG | 0.511744 | 7_2:-33234515 | None:intergenic |
| ACCTGTACAATGTACCATAA+GGG | 0.513397 | 7_2:-33233268 | None:intergenic |
| AGCATTATAGCTGGAATTGT+AGG | 0.513970 | 7_2:+33233457 | Msa1056240:CDS |
| TCAGATCAAAGCTGGGCCAT+TGG | 0.519930 | 7_2:+33233211 | Msa1056240:CDS |
| ATGGTAACCATCAAACCAAA+AGG | 0.520460 | 7_2:-33230774 | None:intergenic |
| GGGATACTCTCCACCTTGGA+AGG | 0.520551 | 7_2:+33233764 | Msa1056240:CDS |
| TTCTACCCATCTAGGGACTA+GGG | 0.523782 | 7_2:+33234745 | Msa1056240:three_prime_UTR |
| ACTTGCTTCCATCCTTTGCT+CGG | 0.525985 | 7_2:+33233531 | Msa1056240:CDS |
| ACCATTAATCTATTTATCAA+CGG | 0.528940 | 7_2:+33234677 | Msa1056240:three_prime_UTR |
| TGAAGAGTAAAGTTTGATTG+AGG | 0.532569 | 7_2:-33230711 | None:intergenic |
| GATCAAAGCTGGGCCATTGG+TGG | 0.533016 | 7_2:+33233214 | Msa1056240:CDS |
| AACAATTCAAATGAATGAGA+AGG | 0.533867 | 7_2:+33234793 | Msa1056240:three_prime_UTR |
| AAGTAGTCAAGCCAAGGTGG+TGG | 0.543714 | 7_2:+33233078 | Msa1056240:CDS |
| AAACCCAATTGATATTATTG+TGG | 0.543749 | 7_2:-33234411 | None:intergenic |
| TCTACAGGTTCAAATTATGA+AGG | 0.549298 | 7_2:+33233387 | Msa1056240:intron |
| CAGCTATAATGCTTACACAT+AGG | 0.549528 | 7_2:-33233447 | None:intergenic |
| CTATGTGTAAGCATTATAGC+TGG | 0.553567 | 7_2:+33233448 | Msa1056240:CDS |
| CTTGGGGATACTCTCCACCT+TGG | 0.559205 | 7_2:+33233760 | Msa1056240:CDS |
| CTAGCAACTTCTGCAAGTTG+GGG | 0.562566 | 7_2:+33234872 | Msa1056240:three_prime_UTR |
| AGAAGTTCATCTCAGATCAT+GGG | 0.564341 | 7_2:+33231247 | Msa1056240:exon |
| TAGCCATTGTTGTCTAGTTG+CGG | 0.564580 | 7_2:+33230622 | Msa1056240:five_prime_UTR |
| CTTGTGGAGATGAAGGGTGC+TGG | 0.565297 | 7_2:-33230909 | None:intergenic |
| GGGTAGAAACTCTCCTGATA+CGG | 0.565416 | 7_2:-33234730 | None:intergenic |
| GCAAGCAAGAAGGTAAAAGC+TGG | 0.569611 | 7_2:-33231328 | None:intergenic |
| GAAAATGATGGCAAGCAAGA+AGG | 0.569755 | 7_2:-33231338 | None:intergenic |
| GGAGAGTTTCTACCCATCTA+GGG | 0.573204 | 7_2:+33234738 | Msa1056240:three_prime_UTR |
| TCATCCTACCGAGCAAAGGA+TGG | 0.574014 | 7_2:-33233539 | None:intergenic |
| GTAAATCATAGTACCTTCCA+AGG | 0.577444 | 7_2:-33233777 | None:intergenic |
| ACAATTCAAATGAATGAGAA+GGG | 0.577856 | 7_2:+33234794 | Msa1056240:three_prime_UTR |
| ACTAACCTTGTGGAGATGAA+GGG | 0.578351 | 7_2:-33230915 | None:intergenic |
| GTGAGCCAAATGCAAGTGCA+TGG | 0.578354 | 7_2:+33233488 | Msa1056240:CDS |
| TAGTAAAATGACAAAATCAA+GGG | 0.578516 | 7_2:+33234605 | Msa1056240:three_prime_UTR |
| GGCACTAAGATATTGTTACA+AGG | 0.582034 | 7_2:+33230743 | Msa1056240:five_prime_UTR |
| CTGATTGCTGAGGAAAGAGT+AGG | 0.587131 | 7_2:-33231295 | None:intergenic |
| TACTATGGTACCCACCACCT+TGG | 0.588212 | 7_2:-33233089 | None:intergenic |
| ATGTTCATCCTACCGAGCAA+AGG | 0.592131 | 7_2:-33233543 | None:intergenic |
| ATCATCATCAGATCAAAGCT+GGG | 0.596636 | 7_2:+33233204 | Msa1056240:CDS |
| AGCAACGTTGATGCATTCCA+TGG | 0.599026 | 7_2:-33230793 | None:intergenic |
| CTAAGAGCAATGATGATTGG+TGG | 0.604707 | 7_2:-33233151 | None:intergenic |
| TATGGGAGTTGTGTTCCTTG+GGG | 0.604835 | 7_2:+33233744 | Msa1056240:CDS |
| AGTATTGGTTTACTAAGAGG+AGG | 0.609608 | 7_2:-33231095 | None:intergenic |
| CATTATTGTCTATTGTACAA+AGG | 0.610060 | 7_2:+33234937 | Msa1056240:three_prime_UTR |
| TTTATAGTGACACTATACAT+AGG | 0.612426 | 7_2:+33233127 | Msa1056240:CDS |
| CATGTGTGACTATAAAGGCA+AGG | 0.617617 | 7_2:+33234908 | Msa1056240:three_prime_UTR |
| TGTTCCCCTAGTCCCTAGAT+GGG | 0.620037 | 7_2:-33234750 | None:intergenic |
| AAGTTTAAGTAGTCAAGCCA+AGG | 0.623683 | 7_2:+33233072 | Msa1056240:CDS |
| TGTAAGTAGAAGACCACCAA+TGG | 0.628504 | 7_2:-33233227 | None:intergenic |
| CAGCACCCTTCATCTCCACA+AGG | 0.628610 | 7_2:+33230910 | Msa1056240:five_prime_UTR |
| AGTAGTCAAGCCAAGGTGGT+GGG | 0.631238 | 7_2:+33233079 | Msa1056240:CDS |
| CACCAAGTTGCTGATTGCTG+AGG | 0.637146 | 7_2:-33231305 | None:intergenic |
| CATATGTGCTACGTATAAAG+GGG | 0.638887 | 7_2:+33233671 | Msa1056240:CDS |
| ATGTGTGACTATAAAGGCAA+GGG | 0.640086 | 7_2:+33234909 | Msa1056240:three_prime_UTR |
| GGGTAAAGCACAAGAAGAGG+TGG | 0.640164 | 7_2:+33234448 | Msa1056240:CDS |
| TGGAGATGAAGGGTGCTGGA+AGG | 0.648947 | 7_2:-33230905 | None:intergenic |
| AAACTCTCCTGATACGGACA+AGG | 0.651139 | 7_2:-33234724 | None:intergenic |
| TCTACCCATCTAGGGACTAG+GGG | 0.659790 | 7_2:+33234746 | Msa1056240:three_prime_UTR |
| GTGGGGTAAAGCACAAGAAG+AGG | 0.661836 | 7_2:+33234445 | Msa1056240:CDS |
| ACTCTCAATTGTCATTGCTG+TGG | 0.661857 | 7_2:+33233720 | Msa1056240:CDS |
| TTTAAGTAGTCAAGCCAAGG+TGG | 0.670840 | 7_2:+33233075 | Msa1056240:CDS |
| TAGCAACTTCTGCAAGTTGG+GGG | 0.674177 | 7_2:+33234873 | Msa1056240:three_prime_UTR |
| ACAGCAATGACAATTGAGAG+TGG | 0.674965 | 7_2:-33233718 | None:intergenic |
| CAATGGCTAGTAGTAGAGTG+TGG | 0.687403 | 7_2:-33230608 | None:intergenic |
| AATCATAGTACCTTCCAAGG+TGG | 0.690246 | 7_2:-33233774 | None:intergenic |
| CAAGGTGGAGAGTATCCCCA+AGG | 0.691065 | 7_2:-33233759 | None:intergenic |
| AAGCATAAACAACAAAGACA+TGG | 0.700920 | 7_2:-33230860 | None:intergenic |
| ATATGTGCTACGTATAAAGG+GGG | 0.701724 | 7_2:+33233672 | Msa1056240:CDS |
| GCACCGCAACTAGACAACAA+TGG | 0.720381 | 7_2:-33230625 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAAATATTTTTT+AGG | - | chr7_2:33231589-33231608 | None:intergenic | 0.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | - | chr7_2:33232037-33232056 | None:intergenic | 10.0% |
| !!! | TTTTCTAAAACAATTTTTAA+AGG | + | chr7_2:33232876-33232895 | Msa1056240:intron | 10.0% |
| !!! | TTTAATTTTTGTAGAATTTT+GGG | - | chr7_2:33235033-33235052 | None:intergenic | 10.0% |
| !!! | TAATTTACTTATTTTTGTAG+TGG | - | chr7_2:33230685-33230704 | None:intergenic | 15.0% |
| !! | TTGAAAATGATAATTAACAT+AGG | - | chr7_2:33231560-33231579 | None:intergenic | 15.0% |
| !! | AAAATGAAAAGTAATAACAT+AGG | - | chr7_2:33231701-33231720 | None:intergenic | 15.0% |
| !! | TTAAGAATTACCATTATTTA+TGG | + | chr7_2:33231733-33231752 | Msa1056240:intron | 15.0% |
| !! | TTTATATATGTTTGTTTAGA+TGG | + | chr7_2:33232545-33232564 | Msa1056240:intron | 15.0% |
| !! | TTAAAAAGAATATATGGAAA+AGG | - | chr7_2:33232799-33232818 | None:intergenic | 15.0% |
| !!! | AAATTTTCTTTATAATCTAC+AGG | + | chr7_2:33233372-33233391 | Msa1056240:intron | 15.0% |
| !! | TTTATACAATTCATATGATT+AGG | + | chr7_2:33233612-33233631 | Msa1056240:intron | 15.0% |
| !! | TTATACAATTCATATGATTA+GGG | + | chr7_2:33233613-33233632 | Msa1056240:intron | 15.0% |
| !!! | TTCAATTGATTAATGATTTT+CGG | + | chr7_2:33233898-33233917 | Msa1056240:intron | 15.0% |
| !!! | GTTTAATTTTTGTAGAATTT+TGG | - | chr7_2:33235034-33235053 | None:intergenic | 15.0% |
| !!! | TTTATTTTGCAATTTTAGTG+TGG | + | chr7_2:33231203-33231222 | Msa1056240:five_prime_UTR | 20.0% |
| !!! | TTTTGTCAACTTAGTAAAAA+TGG | + | chr7_2:33231469-33231488 | Msa1056240:intron | 20.0% |
| !! | CAAATTAACTCCATAAATAA+TGG | - | chr7_2:33231746-33231765 | None:intergenic | 20.0% |
| !! | CATTATTTATGGAGTTAATT+TGG | + | chr7_2:33231744-33231763 | Msa1056240:intron | 20.0% |
| !! | TTGGTTAATTCACAAATTTA+AGG | - | chr7_2:33231852-33231871 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTGGAAATGTTT+TGG | - | chr7_2:33231871-33231890 | None:intergenic | 20.0% |
| !! | AAACATATATAAAGAAGAAC+GGG | - | chr7_2:33232538-33232557 | None:intergenic | 20.0% |
| !! | CAAACATATATAAAGAAGAA+CGG | - | chr7_2:33232539-33232558 | None:intergenic | 20.0% |
| !! | CTTATGACAAAAATAAGAAT+CGG | + | chr7_2:33232843-33232862 | Msa1056240:intron | 20.0% |
| !! | AAATTAAATTGTCCTTGAAA+AGG | + | chr7_2:33232934-33232953 | Msa1056240:intron | 20.0% |
| !!! | TCATATTTCATTTTTTCTGT+TGG | + | chr7_2:33233018-33233037 | Msa1056240:intron | 20.0% |
| !!! | TTTTTCTGTTGGTTTAATTA+AGG | + | chr7_2:33233029-33233048 | Msa1056240:intron | 20.0% |
| !!! | TTGTTGGTTACTAATATATA+TGG | + | chr7_2:33233297-33233316 | Msa1056240:intron | 20.0% |
| !!! | CAATTGAGAATTGAATATTT+TGG | - | chr7_2:33233802-33233821 | None:intergenic | 20.0% |
| !! | ACCAAAAATTAATATTTGAC+TGG | + | chr7_2:33234128-33234147 | Msa1056240:intron | 20.0% |
| !!! | TCCAGTCAAATATTAATTTT+TGG | - | chr7_2:33234132-33234151 | None:intergenic | 20.0% |
| !! | TTAGTAAAATGACAAAATCA+AGG | + | chr7_2:33234604-33234623 | Msa1056240:three_prime_UTR | 20.0% |
| !! | TAGTAAAATGACAAAATCAA+GGG | + | chr7_2:33234605-33234624 | Msa1056240:three_prime_UTR | 20.0% |
| !! | ACCATTAATCTATTTATCAA+CGG | + | chr7_2:33234677-33234696 | Msa1056240:three_prime_UTR | 20.0% |
| !! | GGAACAATTTTATGACAAAT+GGG | - | chr7_2:33230650-33230669 | None:intergenic | 25.0% |
| !! | AGGAACAATTTTATGACAAA+TGG | - | chr7_2:33230651-33230670 | None:intergenic | 25.0% |
| ! | CTTTACTCTTCAAGAAAAAA+TGG | + | chr7_2:33230722-33230741 | Msa1056240:five_prime_UTR | 25.0% |
| ! | AAGATATTGTTACAAGGATT+TGG | + | chr7_2:33230749-33230768 | Msa1056240:five_prime_UTR | 25.0% |
| ! | AAACCAATACTATGCAAAAT+TGG | + | chr7_2:33231107-33231126 | Msa1056240:five_prime_UTR | 25.0% |
| !!! | CATGATTTCCTTTGTTTTTT+AGG | - | chr7_2:33231442-33231461 | None:intergenic | 25.0% |
| !! | TTCCATCTAAGAAATTTTTG+TGG | + | chr7_2:33231784-33231803 | Msa1056240:intron | 25.0% |
| !! | TTGATCAACGATTTTCAATT+TGG | - | chr7_2:33231882-33231901 | None:intergenic | 25.0% |
| ! | AAAAACTTAGGCAAAATTGT+TGG | - | chr7_2:33232025-33232044 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr7_2:33232153-33232172 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr7_2:33232166-33232185 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr7_2:33232165-33232184 | Msa1056240:intron | 25.0% |
| ! | TCAACAAAGTTGTTATCAAA+TGG | + | chr7_2:33232191-33232210 | Msa1056240:intron | 25.0% |
| !! | ACATCATTGATGCTTTTATT+AGG | - | chr7_2:33232685-33232704 | None:intergenic | 25.0% |
| !! | GACAATTTAATTTCTTGTGT+GGG | - | chr7_2:33232927-33232946 | None:intergenic | 25.0% |
| ! | TTAATTAAGGATGGAAAAAG+TGG | + | chr7_2:33233042-33233061 | Msa1056240:intron | 25.0% |
| ! | TTTATAGTGACACTATACAT+AGG | + | chr7_2:33233127-33233146 | Msa1056240:CDS | 25.0% |
| ! | AGTATATATTAGTTCCCTTA+TGG | + | chr7_2:33233254-33233273 | Msa1056240:CDS | 25.0% |
| !!! | TACAAACTCATTTTAGTTCT+TGG | + | chr7_2:33233344-33233363 | Msa1056240:intron | 25.0% |
| !! | TCATATGATTAGGGAATTTT+TGG | + | chr7_2:33233622-33233641 | Msa1056240:intron | 25.0% |
| !!! | CTCTTAACTTTTTGATTCAT+CGG | - | chr7_2:33234219-33234238 | None:intergenic | 25.0% |
| ! | TTTATGCACTAATTGATAGA+TGG | - | chr7_2:33234303-33234322 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTTGCAGTTTAAT+TGG | + | chr7_2:33234386-33234405 | Msa1056240:intron | 25.0% |
| ! | AAACCCAATTGATATTATTG+TGG | - | chr7_2:33234414-33234433 | None:intergenic | 25.0% |
| ! | TGATAGAGTACAAAAGAAAA+TGG | + | chr7_2:33234538-33234557 | Msa1056240:CDS | 25.0% |
| ! | AATGGATGCAAATGTATAAA+AGG | + | chr7_2:33234556-33234575 | Msa1056240:exon | 25.0% |
| ! | ATGGATGCAAATGTATAAAA+GGG | + | chr7_2:33234557-33234576 | Msa1056240:exon | 25.0% |
| !! | ACCGTTGATAAATAGATTAA+TGG | - | chr7_2:33234681-33234700 | None:intergenic | 25.0% |
| ! | AACAATTCAAATGAATGAGA+AGG | + | chr7_2:33234793-33234812 | Msa1056240:three_prime_UTR | 25.0% |
| ! | ACAATTCAAATGAATGAGAA+GGG | + | chr7_2:33234794-33234813 | Msa1056240:three_prime_UTR | 25.0% |
| ! | CATTATTGTCTATTGTACAA+AGG | + | chr7_2:33234937-33234956 | Msa1056240:three_prime_UTR | 25.0% |
| GTAAAGTTTGATTGAGGTTA+AGG | - | chr7_2:33230708-33230727 | None:intergenic | 30.0% | |
| TGAAGAGTAAAGTTTGATTG+AGG | - | chr7_2:33230714-33230733 | None:intergenic | 30.0% | |
| AAGCATAAACAACAAAGACA+TGG | - | chr7_2:33230863-33230882 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTCTACTAACCTTG+TGG | - | chr7_2:33230928-33230947 | None:intergenic | 30.0% |
| GAGACGATGTAAAAAGTTTA+GGG | - | chr7_2:33230974-33230993 | None:intergenic | 30.0% | |
| TGAGACGATGTAAAAAGTTT+AGG | - | chr7_2:33230975-33230994 | None:intergenic | 30.0% | |
| !! | CATAGTATTGGTTTACTAAG+AGG | - | chr7_2:33231101-33231120 | None:intergenic | 30.0% |
| ! | AGACCAATTTTGCATAGTAT+TGG | - | chr7_2:33231113-33231132 | None:intergenic | 30.0% |
| !! | TATGCAAAATTGGTCTTCTT+GGG | + | chr7_2:33231117-33231136 | Msa1056240:five_prime_UTR | 30.0% |
| AAGAAGAAACCTGAAAATGA+TGG | - | chr7_2:33231353-33231372 | None:intergenic | 30.0% | |
| CTCCACAAAAATTTCTTAGA+TGG | - | chr7_2:33231789-33231808 | None:intergenic | 30.0% | |
| TTTCAACCTATATCCATCAA+AGG | + | chr7_2:33231823-33231842 | Msa1056240:intron | 30.0% | |
| AAATTTAAGGAGTCCTTTGA+TGG | - | chr7_2:33231839-33231858 | None:intergenic | 30.0% | |
| AGTATAAGACCCTTGAATTT+GGG | - | chr7_2:33231960-33231979 | None:intergenic | 30.0% | |
| TAGTATAAGACCCTTGAATT+TGG | - | chr7_2:33231961-33231980 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr7_2:33232068-33232087 | Msa1056240:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr7_2:33232140-33232159 | None:intergenic | 30.0% | |
| !! | GTTTGTTTAGATGGATTGAT+AGG | + | chr7_2:33232554-33232573 | Msa1056240:intron | 30.0% |
| !! | CAGACATTTTAATCAGTGTA+TGG | + | chr7_2:33232586-33232605 | Msa1056240:intron | 30.0% |
| ! | AATATCTTGCTATAAAGCTG+AGG | - | chr7_2:33232643-33232662 | None:intergenic | 30.0% |
| ! | CTTTTATTAGGATCTACATG+TGG | - | chr7_2:33232673-33232692 | None:intergenic | 30.0% |
| GCATCAATGATGTTAGAATA+AGG | + | chr7_2:33232692-33232711 | Msa1056240:intron | 30.0% | |
| CTATGACAATTCAATGAGTT+TGG | + | chr7_2:33232716-33232735 | Msa1056240:intron | 30.0% | |
| ! | GGACAATTTAATTTCTTGTG+TGG | - | chr7_2:33232928-33232947 | None:intergenic | 30.0% |
| ! | TTCTTATAGCTACCTTTTCA+AGG | - | chr7_2:33232949-33232968 | None:intergenic | 30.0% |
| !! | TCTGTTGGTTTAATTAAGGA+TGG | + | chr7_2:33233033-33233052 | Msa1056240:intron | 30.0% |
| TTGTACAGGTACAAATTTGT+TGG | + | chr7_2:33233281-33233300 | Msa1056240:intron | 30.0% | |
| TCTACAGGTTCAAATTATGA+AGG | + | chr7_2:33233387-33233406 | Msa1056240:intron | 30.0% | |
| AAGATCACTGTTAGTTCATT+TGG | - | chr7_2:33233418-33233437 | None:intergenic | 30.0% | |
| GGATGAACATGAAATAATAC+AGG | + | chr7_2:33233556-33233575 | Msa1056240:intron | 30.0% | |
| CTACGTTGAATACAAATGTT+TGG | + | chr7_2:33233875-33233894 | Msa1056240:intron | 30.0% | |
| CATTAATCACATGAGTTCAA+CGG | - | chr7_2:33234076-33234095 | None:intergenic | 30.0% | |
| ATGTAATTTGACCTTAGTTG+AGG | - | chr7_2:33234101-33234120 | None:intergenic | 30.0% | |
| !! | TTAACTTTTTGATTCATCGG+AGG | - | chr7_2:33234216-33234235 | None:intergenic | 30.0% |
| CTGAATAACTAACTCTTGAA+GGG | - | chr7_2:33234275-33234294 | None:intergenic | 30.0% | |
| ACTGAATAACTAACTCTTGA+AGG | - | chr7_2:33234276-33234295 | None:intergenic | 30.0% | |
| GAGCCACAATAATATCAATT+GGG | + | chr7_2:33234408-33234427 | Msa1056240:CDS | 30.0% | |
| !! | TTGGGTTTTATACTGTAATG+TGG | + | chr7_2:33234426-33234445 | Msa1056240:CDS | 30.0% |
| !! | TGGGTTTTATACTGTAATGT+GGG | + | chr7_2:33234427-33234446 | Msa1056240:CDS | 30.0% |
| GCAAATGTATAAAAGGGATT+TGG | + | chr7_2:33234563-33234582 | Msa1056240:exon | 30.0% | |
| TTACTAACTACTCACTTTAG+AGG | - | chr7_2:33234591-33234610 | None:intergenic | 30.0% | |
| CATCATAACAACATCATCAT+TGG | - | chr7_2:33234643-33234662 | None:intergenic | 30.0% | |
| !! | AATTTGTGTTGTTTGCTACA+TGG | - | chr7_2:33234830-33234849 | None:intergenic | 30.0% |
| ATAGTCACACATGTGTATAT+TGG | - | chr7_2:33234901-33234920 | None:intergenic | 30.0% | |
| ATACACATGTGTGACTATAA+AGG | + | chr7_2:33234903-33234922 | Msa1056240:three_prime_UTR | 30.0% | |
| !! | TCTATTGTACAAAGGCATTT+GGG | + | chr7_2:33234945-33234964 | Msa1056240:three_prime_UTR | 30.0% |
| ! | TTGTAGTGGAAGTGTGAATA+AGG | - | chr7_2:33230671-33230690 | None:intergenic | 35.0% |
| GGCACTAAGATATTGTTACA+AGG | + | chr7_2:33230743-33230762 | Msa1056240:five_prime_UTR | 35.0% | |
| !! | TACAAGGATTTGGTTCCTTT+TGG | + | chr7_2:33230759-33230778 | Msa1056240:five_prime_UTR | 35.0% |
| !!! | TTTGGTTCCTTTTGGTTTGA+TGG | + | chr7_2:33230767-33230786 | Msa1056240:five_prime_UTR | 35.0% |
| ATGGTAACCATCAAACCAAA+AGG | - | chr7_2:33230777-33230796 | None:intergenic | 35.0% | |
| !!! | TTTTGGTTTGATGGTTACCA+TGG | + | chr7_2:33230776-33230795 | Msa1056240:five_prime_UTR | 35.0% |
| ATGGTAACTCATTCCTTTCA+CGG | - | chr7_2:33230844-33230863 | None:intergenic | 35.0% | |
| !! | AGTATTGGTTTACTAAGAGG+AGG | - | chr7_2:33231098-33231117 | None:intergenic | 35.0% |
| !! | CTATGCAAAATTGGTCTTCT+TGG | + | chr7_2:33231116-33231135 | Msa1056240:five_prime_UTR | 35.0% |
| AGAAGTTCATCTCAGATCAT+GGG | + | chr7_2:33231247-33231266 | Msa1056240:exon | 35.0% | |
| GAGTTCAGCCTAAAAAACAA+AGG | + | chr7_2:33231431-33231450 | Msa1056240:intron | 35.0% | |
| !! | ACCATTTTTGCCCAAATTCA+AGG | + | chr7_2:33231947-33231966 | Msa1056240:intron | 35.0% |
| !! | CCATTTTTGCCCAAATTCAA+GGG | + | chr7_2:33231948-33231967 | Msa1056240:intron | 35.0% |
| GCAAAATTGTTGGAGTAATG+TGG | - | chr7_2:33232015-33232034 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr7_2:33232073-33232092 | None:intergenic | 35.0% | |
| AAGTTTAAGTAGTCAAGCCA+AGG | + | chr7_2:33233072-33233091 | Msa1056240:CDS | 35.0% | |
| GGTACCATAGTATCTATATC+AGG | + | chr7_2:33233100-33233119 | Msa1056240:CDS | 35.0% | |
| TGCTCCTGATATAGATACTA+TGG | - | chr7_2:33233107-33233126 | None:intergenic | 35.0% | |
| GATCTAAGAGCAATGATGAT+TGG | - | chr7_2:33233157-33233176 | None:intergenic | 35.0% | |
| AATCATCATCAGATCAAAGC+TGG | + | chr7_2:33233203-33233222 | Msa1056240:CDS | 35.0% | |
| ATCATCATCAGATCAAAGCT+GGG | + | chr7_2:33233204-33233223 | Msa1056240:CDS | 35.0% | |
| ACCTGTACAATGTACCATAA+GGG | - | chr7_2:33233271-33233290 | None:intergenic | 35.0% | |
| TACCTGTACAATGTACCATA+AGG | - | chr7_2:33233272-33233291 | None:intergenic | 35.0% | |
| CAGCTATAATGCTTACACAT+AGG | - | chr7_2:33233450-33233469 | None:intergenic | 35.0% | |
| CTATGTGTAAGCATTATAGC+TGG | + | chr7_2:33233448-33233467 | Msa1056240:CDS | 35.0% | |
| AGCATTATAGCTGGAATTGT+AGG | + | chr7_2:33233457-33233476 | Msa1056240:CDS | 35.0% | |
| ! | ATTTTCCATGCACTTGCATT+TGG | - | chr7_2:33233496-33233515 | None:intergenic | 35.0% |
| AATGCAAGTGCATGGAAAAT+AGG | + | chr7_2:33233496-33233515 | Msa1056240:CDS | 35.0% | |
| TGCATATGTGCTACGTATAA+AGG | + | chr7_2:33233669-33233688 | Msa1056240:CDS | 35.0% | |
| GCATATGTGCTACGTATAAA+GGG | + | chr7_2:33233670-33233689 | Msa1056240:CDS | 35.0% | |
| CATATGTGCTACGTATAAAG+GGG | + | chr7_2:33233671-33233690 | Msa1056240:CDS | 35.0% | |
| ATATGTGCTACGTATAAAGG+GGG | + | chr7_2:33233672-33233691 | Msa1056240:CDS | 35.0% | |
| GTAAATCATAGTACCTTCCA+AGG | - | chr7_2:33233780-33233799 | None:intergenic | 35.0% | |
| TCGGAGATTGTTGAATCAAT+AGG | + | chr7_2:33233917-33233936 | Msa1056240:intron | 35.0% | |
| CGGAGATTGTTGAATCAATA+GGG | + | chr7_2:33233918-33233937 | Msa1056240:intron | 35.0% | |
| AGTCTGGTAAATGATTGTTC+TGG | - | chr7_2:33233966-33233985 | None:intergenic | 35.0% | |
| !! | AAACGGTTTTGATAATCCAG+GGG | - | chr7_2:33234008-33234027 | None:intergenic | 35.0% |
| !! | GAAACGGTTTTGATAATCCA+GGG | - | chr7_2:33234009-33234028 | None:intergenic | 35.0% |
| !! | AGAAACGGTTTTGATAATCC+AGG | - | chr7_2:33234010-33234029 | None:intergenic | 35.0% |
| AAAACCGTTTCTCATGAGAA+CGG | + | chr7_2:33234018-33234037 | Msa1056240:intron | 35.0% | |
| TGATTAATGAGCCTCAACTA+AGG | + | chr7_2:33234087-33234106 | Msa1056240:intron | 35.0% | |
| TAATATAGAGTACGATCGAG+AGG | - | chr7_2:33234179-33234198 | None:intergenic | 35.0% | |
| GGAGCCACAATAATATCAAT+TGG | + | chr7_2:33234407-33234426 | Msa1056240:CDS | 35.0% | |
| !! | GGGTTTTATACTGTAATGTG+GGG | + | chr7_2:33234428-33234447 | Msa1056240:CDS | 35.0% |
| ATGTGTGACTATAAAGGCAA+GGG | + | chr7_2:33234909-33234928 | Msa1056240:three_prime_UTR | 35.0% | |
| !! | GTCTATTGTACAAAGGCATT+TGG | + | chr7_2:33234944-33234963 | Msa1056240:three_prime_UTR | 35.0% |
| !! | TTTGTTGTCTTTTCTGCATG+TGG | - | chr7_2:33234994-33235013 | None:intergenic | 35.0% |
| TAGCCATTGTTGTCTAGTTG+CGG | + | chr7_2:33230622-33230641 | Msa1056240:five_prime_UTR | 40.0% | |
| ACTAACCTTGTGGAGATGAA+GGG | - | chr7_2:33230918-33230937 | None:intergenic | 40.0% | |
| TACTAACCTTGTGGAGATGA+AGG | - | chr7_2:33230919-33230938 | None:intergenic | 40.0% | |
| !! | ATTGGTCTTCTTGGGTTGAT+CGG | + | chr7_2:33231125-33231144 | Msa1056240:five_prime_UTR | 40.0% |
| CAGAAGTTCATCTCAGATCA+TGG | + | chr7_2:33231246-33231265 | Msa1056240:exon | 40.0% | |
| ! | TCTCAGATCATGGGTTATAC+AGG | + | chr7_2:33231256-33231275 | Msa1056240:exon | 40.0% |
| GAAAATGATGGCAAGCAAGA+AGG | - | chr7_2:33231341-33231360 | None:intergenic | 40.0% | |
| ! | TCTTGCTTGCCATCATTTTC+AGG | + | chr7_2:33231341-33231360 | Msa1056240:CDS | 40.0% |
| ! | AGGAGTCCTTTGATGGATAT+AGG | - | chr7_2:33231832-33231851 | None:intergenic | 40.0% |
| CAAACTCCAAATAATGTGGC+TGG | - | chr7_2:33231926-33231945 | None:intergenic | 40.0% | |
| ! | CAGCCACATTATTTGGAGTT+TGG | + | chr7_2:33231924-33231943 | Msa1056240:intron | 40.0% |
| GGTCCAAACTCCAAATAATG+TGG | - | chr7_2:33231930-33231949 | None:intergenic | 40.0% | |
| CCCTTGAATTTGGGCAAAAA+TGG | - | chr7_2:33231951-33231970 | None:intergenic | 40.0% | |
| AATTGTTGGAGTAATGTGGC+TGG | - | chr7_2:33232011-33232030 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr7_2:33232130-33232149 | None:intergenic | 40.0% | |
| AATTCAATGAGTTTGGCCTC+TGG | + | chr7_2:33232723-33232742 | Msa1056240:intron | 40.0% | |
| TTTAAGTAGTCAAGCCAAGG+TGG | + | chr7_2:33233075-33233094 | Msa1056240:CDS | 40.0% | |
| CTAAGAGCAATGATGATTGG+TGG | - | chr7_2:33233154-33233173 | None:intergenic | 40.0% | |
| TGTAAGTAGAAGACCACCAA+TGG | - | chr7_2:33233230-33233249 | None:intergenic | 40.0% | |
| TCCCTTATGGTACATTGTAC+AGG | + | chr7_2:33233267-33233286 | Msa1056240:CDS | 40.0% | |
| ACAGCAATGACAATTGAGAG+TGG | - | chr7_2:33233721-33233740 | None:intergenic | 40.0% | |
| ACTCTCAATTGTCATTGCTG+TGG | + | chr7_2:33233720-33233739 | Msa1056240:CDS | 40.0% | |
| AATTGTCATTGCTGTGGCTA+TGG | + | chr7_2:33233726-33233745 | Msa1056240:CDS | 40.0% | |
| ATTGTCATTGCTGTGGCTAT+GGG | + | chr7_2:33233727-33233746 | Msa1056240:CDS | 40.0% | |
| AATCATAGTACCTTCCAAGG+TGG | - | chr7_2:33233777-33233796 | None:intergenic | 40.0% | |
| ! | GGTAAATGATTGTTCTGGCT+AGG | - | chr7_2:33233961-33233980 | None:intergenic | 40.0% |
| ! | TCTGTGTAGTTTGTGTTTCG+TGG | - | chr7_2:33234490-33234509 | None:intergenic | 40.0% |
| ! | GTTTCATAGCTTTGCAAGAG+AGG | - | chr7_2:33234518-33234537 | None:intergenic | 40.0% |
| CATGTGTGACTATAAAGGCA+AGG | + | chr7_2:33234908-33234927 | Msa1056240:three_prime_UTR | 40.0% | |
| CAATGGCTAGTAGTAGAGTG+TGG | - | chr7_2:33230611-33230630 | None:intergenic | 45.0% | |
| AGCAACGTTGATGCATTCCA+TGG | - | chr7_2:33230796-33230815 | None:intergenic | 45.0% | |
| TTCAAAGCTGCTACCGTGAA+AGG | + | chr7_2:33230828-33230847 | Msa1056240:five_prime_UTR | 45.0% | |
| ATCGTCTCAACTCATACCAC+TGG | + | chr7_2:33230986-33231005 | Msa1056240:intron | 45.0% | |
| ! | ACTGGACTGGACTACACTTT+CGG | + | chr7_2:33231004-33231023 | Msa1056240:intron | 45.0% |
| !! | TTGGTCTTCTTGGGTTGATC+GGG | + | chr7_2:33231126-33231145 | Msa1056240:five_prime_UTR | 45.0% |
| CTGATTGCTGAGGAAAGAGT+AGG | - | chr7_2:33231298-33231317 | None:intergenic | 45.0% | |
| TTCCTCAGCAATCAGCAACT+TGG | + | chr7_2:33231303-33231322 | Msa1056240:CDS | 45.0% | |
| GCAAGCAAGAAGGTAAAAGC+TGG | - | chr7_2:33231331-33231350 | None:intergenic | 45.0% | |
| TGATAGAGCCGTGAACTAGA+CGG | - | chr7_2:33232751-33232770 | None:intergenic | 45.0% | |
| ACTTGCTTCCATCCTTTGCT+CGG | + | chr7_2:33233531-33233550 | Msa1056240:CDS | 45.0% | |
| ATGTTCATCCTACCGAGCAA+AGG | - | chr7_2:33233546-33233565 | None:intergenic | 45.0% | |
| CTATGGGAGTTGTGTTCCTT+GGG | + | chr7_2:33233743-33233762 | Msa1056240:CDS | 45.0% | |
| TATGGGAGTTGTGTTCCTTG+GGG | + | chr7_2:33233744-33233763 | Msa1056240:CDS | 45.0% | |
| GTCACAAGGCAAGTAAAGTC+TGG | - | chr7_2:33233982-33234001 | None:intergenic | 45.0% | |
| !! | GGTTTTGATAATCCAGGGGT+CGG | - | chr7_2:33234004-33234023 | None:intergenic | 45.0% |
| AAACTCTCCTGATACGGACA+AGG | - | chr7_2:33234727-33234746 | None:intergenic | 45.0% | |
| GGGTAGAAACTCTCCTGATA+CGG | - | chr7_2:33234733-33234752 | None:intergenic | 45.0% | |
| AGGAGAGTTTCTACCCATCT+AGG | + | chr7_2:33234737-33234756 | Msa1056240:three_prime_UTR | 45.0% | |
| GGAGAGTTTCTACCCATCTA+GGG | + | chr7_2:33234738-33234757 | Msa1056240:three_prime_UTR | 45.0% | |
| TTTCTACCCATCTAGGGACT+AGG | + | chr7_2:33234744-33234763 | Msa1056240:three_prime_UTR | 45.0% | |
| TTCTACCCATCTAGGGACTA+GGG | + | chr7_2:33234745-33234764 | Msa1056240:three_prime_UTR | 45.0% | |
| AGCTAGCAACTTCTGCAAGT+TGG | + | chr7_2:33234870-33234889 | Msa1056240:three_prime_UTR | 45.0% | |
| GCTAGCAACTTCTGCAAGTT+GGG | + | chr7_2:33234871-33234890 | Msa1056240:three_prime_UTR | 45.0% | |
| CTAGCAACTTCTGCAAGTTG+GGG | + | chr7_2:33234872-33234891 | Msa1056240:three_prime_UTR | 45.0% | |
| ! | TAGCAACTTCTGCAAGTTGG+GGG | + | chr7_2:33234873-33234892 | Msa1056240:three_prime_UTR | 45.0% |
| !! | ATTTATTTAAAAAGAATATA+TGG | - | chr7_2:33232805-33232824 | None:intergenic | 5.0% |
| GCACCGCAACTAGACAACAA+TGG | - | chr7_2:33230628-33230647 | None:intergenic | 50.0% | |
| CTCAACTCATACCACTGGAC+TGG | + | chr7_2:33230991-33231010 | Msa1056240:intron | 50.0% | |
| ! | GAAAGTGTAGTCCAGTCCAG+TGG | - | chr7_2:33231005-33231024 | None:intergenic | 50.0% |
| ! | CACCAAGTTGCTGATTGCTG+AGG | - | chr7_2:33231308-33231327 | None:intergenic | 50.0% |
| CCAACACATGCTTGCACATG+AGG | - | chr7_2:33231412-33231431 | None:intergenic | 50.0% | |
| CCTCATGTGCAAGCATGTGT+TGG | + | chr7_2:33231409-33231428 | Msa1056240:intron | 50.0% | |
| CGTGTGCCAGCCACATTATT+TGG | + | chr7_2:33231917-33231936 | Msa1056240:intron | 50.0% | |
| GATAGAGCCGTGAACTAGAC+GGG | - | chr7_2:33232750-33232769 | None:intergenic | 50.0% | |
| AAGTAGTCAAGCCAAGGTGG+TGG | + | chr7_2:33233078-33233097 | Msa1056240:CDS | 50.0% | |
| AGTAGTCAAGCCAAGGTGGT+GGG | + | chr7_2:33233079-33233098 | Msa1056240:CDS | 50.0% | |
| TACTATGGTACCCACCACCT+TGG | - | chr7_2:33233092-33233111 | None:intergenic | 50.0% | |
| TCAGATCAAAGCTGGGCCAT+TGG | + | chr7_2:33233211-33233230 | Msa1056240:CDS | 50.0% | |
| GTGAGCCAAATGCAAGTGCA+TGG | + | chr7_2:33233488-33233507 | Msa1056240:CDS | 50.0% | |
| TCATCCTACCGAGCAAAGGA+TGG | - | chr7_2:33233542-33233561 | None:intergenic | 50.0% | |
| GCTATGGGAGTTGTGTTCCT+TGG | + | chr7_2:33233742-33233761 | Msa1056240:CDS | 50.0% | |
| ACCGTTTCTCATGAGAACGG+AGG | + | chr7_2:33234021-33234040 | Msa1056240:intron | 50.0% | |
| CCCTCCGTTCTCATGAGAAA+CGG | - | chr7_2:33234025-33234044 | None:intergenic | 50.0% | |
| CCGTTTCTCATGAGAACGGA+GGG | + | chr7_2:33234022-33234041 | Msa1056240:intron | 50.0% | |
| GTGGGGTAAAGCACAAGAAG+AGG | + | chr7_2:33234445-33234464 | Msa1056240:CDS | 50.0% | |
| GGGTAAAGCACAAGAAGAGG+TGG | + | chr7_2:33234448-33234467 | Msa1056240:CDS | 50.0% | |
| ! | AGATGAGCCTTGTCCGTATC+AGG | + | chr7_2:33234717-33234736 | Msa1056240:three_prime_UTR | 50.0% |
| TCTACCCATCTAGGGACTAG+GGG | + | chr7_2:33234746-33234765 | Msa1056240:three_prime_UTR | 50.0% | |
| TGTTCCCCTAGTCCCTAGAT+GGG | - | chr7_2:33234753-33234772 | None:intergenic | 50.0% | |
| ATGTTCCCCTAGTCCCTAGA+TGG | - | chr7_2:33234754-33234773 | None:intergenic | 50.0% | |
| !! | TGGAGATGAAGGGTGCTGGA+AGG | - | chr7_2:33230908-33230927 | None:intergenic | 55.0% |
| ! | CTTGTGGAGATGAAGGGTGC+TGG | - | chr7_2:33230912-33230931 | None:intergenic | 55.0% |
| CAGCACCCTTCATCTCCACA+AGG | + | chr7_2:33230910-33230929 | Msa1056240:five_prime_UTR | 55.0% | |
| AATGTGGCTGGCACACGCAA+AGG | - | chr7_2:33231999-33232018 | None:intergenic | 55.0% | |
| ! | CTCTGGACCCGTCTAGTTCA+CGG | + | chr7_2:33232740-33232759 | Msa1056240:intron | 55.0% |
| GATCAAAGCTGGGCCATTGG+TGG | + | chr7_2:33233214-33233233 | Msa1056240:CDS | 55.0% | |
| GCTTCCATCCTTTGCTCGGT+AGG | + | chr7_2:33233535-33233554 | Msa1056240:intron | 55.0% | |
| !! | CAAGGTGGAGAGTATCCCCA+AGG | - | chr7_2:33233762-33233781 | None:intergenic | 55.0% |
| CTTGGGGATACTCTCCACCT+TGG | + | chr7_2:33233760-33233779 | Msa1056240:CDS | 55.0% | |
| GGGATACTCTCCACCTTGGA+AGG | + | chr7_2:33233764-33233783 | Msa1056240:CDS | 55.0% | |
| TAATCCAGGGGTCGGTCACA+AGG | - | chr7_2:33233996-33234015 | None:intergenic | 55.0% | |
| TAATGTGGCTGGCACACGCG+AGG | - | chr7_2:33231915-33231934 | None:intergenic | 60.0% | |
| CGTGAACTAGACGGGTCCAG+AGG | - | chr7_2:33232742-33232761 | None:intergenic | 60.0% | |
| CTTGCCTTGTGACCGACCCC+TGG | + | chr7_2:33233989-33234008 | Msa1056240:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 33230608 | 33235067 | 33230608 | ID=Msa1056240;Name=Msa1056240 |
| chr7_2 | mRNA | 33230608 | 33235067 | 33230608 | ID=Msa1056240-mRNA-1;Parent=Msa1056240;Name=Msa1056240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=507|1|1|1|1|0.83|6|493|273 |
| chr7_2 | exon | 33230608 | 33230931 | 33230608 | ID=Msa1056240-mRNA-1:exon:6580;Parent=Msa1056240-mRNA-1 |
| chr7_2 | exon | 33231082 | 33231362 | 33231082 | ID=Msa1056240-mRNA-1:exon:6581;Parent=Msa1056240-mRNA-1 |
| chr7_2 | exon | 33233051 | 33233288 | 33233051 | ID=Msa1056240-mRNA-1:exon:6582;Parent=Msa1056240-mRNA-1 |
| chr7_2 | exon | 33233394 | 33233552 | 33233394 | ID=Msa1056240-mRNA-1:exon:6583;Parent=Msa1056240-mRNA-1 |
| chr7_2 | exon | 33233634 | 33233785 | 33233634 | ID=Msa1056240-mRNA-1:exon:6584;Parent=Msa1056240-mRNA-1 |
| chr7_2 | exon | 33234400 | 33235067 | 33234400 | ID=Msa1056240-mRNA-1:exon:6585;Parent=Msa1056240-mRNA-1 |
| chr7_2 | five_prime_UTR | 33230608 | 33230931 | 33230608 | ID=Msa1056240-mRNA-1:five_prime_utr;Parent=Msa1056240-mRNA-1 |
| chr7_2 | five_prime_UTR | 33231082 | 33231264 | 33231082 | ID=Msa1056240-mRNA-1:five_prime_utr;Parent=Msa1056240-mRNA-1 |
| chr7_2 | CDS | 33231265 | 33231362 | 33231265 | ID=Msa1056240-mRNA-1:cds;Parent=Msa1056240-mRNA-1 |
| chr7_2 | CDS | 33233051 | 33233288 | 33233051 | ID=Msa1056240-mRNA-1:cds;Parent=Msa1056240-mRNA-1 |
| chr7_2 | CDS | 33233394 | 33233552 | 33233394 | ID=Msa1056240-mRNA-1:cds;Parent=Msa1056240-mRNA-1 |
| chr7_2 | CDS | 33233634 | 33233785 | 33233634 | ID=Msa1056240-mRNA-1:cds;Parent=Msa1056240-mRNA-1 |
| chr7_2 | CDS | 33234400 | 33234574 | 33234400 | ID=Msa1056240-mRNA-1:cds;Parent=Msa1056240-mRNA-1 |
| chr7_2 | three_prime_UTR | 33234575 | 33235067 | 33234575 | ID=Msa1056240-mRNA-1:three_prime_utr;Parent=Msa1056240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
