Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058600 | XP_003624182.1 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058600 | sp|Q5ZL42|5MP1_CHICK | 31.807 | 415 | 274 | 4 | 1 | 410 | 1 | 411 | 3.40e-74 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058600 | G7KRJ1 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 833 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1058600 | Msa1156050 | 0.982612 | 1.528249e-155 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058600 | MtrunA17_Chr7g0249391 | 97.450 | 353 | 9 | 0 | 59 | 411 | 2 | 354 | 0.0 | 698 |
| Msa1058600 | MtrunA17_Chr7g0249381 | 100.000 | 68 | 0 | 0 | 1 | 68 | 1 | 68 | 2.34e-41 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1058600 | AT5G36230.1 | 81.931 | 404 | 73 | 0 | 1 | 404 | 1 | 404 | 0.0 | 712 |
| Msa1058600 | AT5G36230.2 | 81.886 | 403 | 73 | 0 | 2 | 404 | 15 | 417 | 0.0 | 709 |
| Msa1058600 | AT1G65220.1 | 79.950 | 404 | 81 | 0 | 1 | 404 | 1 | 404 | 0.0 | 696 |
Find 125 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTATAACCGACTTCTTTA+AGG | 0.164759 | 7_2:-43576711 | Msa1058600:CDS |
| CACTTGAACCCTTTGTTAAT+TGG | 0.169893 | 7_2:-43574669 | Msa1058600:CDS |
| AGTCTTTCTCTGAGCATTTC+AGG | 0.235027 | 7_2:-43576583 | Msa1058600:intron |
| ATCCGCACAATCTCGGTTTC+AGG | 0.251126 | 7_2:+43575532 | None:intergenic |
| CTTTGGGGTTTGTTCCTTTA+CGG | 0.268125 | 7_2:+43574844 | None:intergenic |
| TGTTGCCTCATACTCTATTA+TGG | 0.300396 | 7_2:+43576985 | None:intergenic |
| TCATCGGGCTTGGTAGTTCC+AGG | 0.307660 | 7_2:+43577028 | None:intergenic |
| AAAACTGCTTACCTTCCTTT+GGG | 0.325625 | 7_2:+43574828 | None:intergenic |
| AAAAGTTGAAGATAATCTTT+TGG | 0.333496 | 7_2:-43576636 | Msa1058600:CDS |
| CTTGGATAATGCTGGTGATT+TGG | 0.342588 | 7_2:-43577869 | Msa1058600:intron |
| CGCCGCGATGTTCCGTTTGC+GGG | 0.349627 | 7_2:+43577936 | None:intergenic |
| CTCTACTCGGTGATGATTGT+TGG | 0.355536 | 7_2:+43578960 | None:intergenic |
| CCTCATAAACCAAGACGAAT+TGG | 0.356220 | 7_2:+43578918 | None:intergenic |
| CCAATTCGTCTTGGTTTATG+AGG | 0.364479 | 7_2:-43578918 | Msa1058600:intron |
| TCTTATTGCAATTCTGAAAC+GGG | 0.365699 | 7_2:-43576660 | Msa1058600:CDS |
| CAGCATTATCCAAGTAAATC+TGG | 0.369100 | 7_2:+43577878 | None:intergenic |
| CTGAAGATACCATTCTTCAT+TGG | 0.370219 | 7_2:-43574869 | Msa1058600:CDS |
| TCTACTCGGTGATGATTGTT+GGG | 0.370975 | 7_2:+43578961 | None:intergenic |
| ATGGATGCTGTTCAGTGGTC+AGG | 0.372899 | 7_2:-43575493 | Msa1058600:CDS |
| CGAGATTGTGCGGATCTTAT+GGG | 0.373009 | 7_2:-43575524 | Msa1058600:CDS |
| GCTTTCTCTCAGAAGCTATC+TGG | 0.375172 | 7_2:-43576803 | Msa1058600:CDS |
| TATTGAGACTGTGAAGCTTC+GGG | 0.375344 | 7_2:-43575572 | Msa1058600:CDS |
| CCCGAGAGTGGGTTTCTCCT+TGG | 0.381454 | 7_2:+43578421 | None:intergenic |
| TATTAGATCTCTTTATGAAC+AGG | 0.384592 | 7_2:-43574901 | Msa1058600:CDS |
| TTATTGAGACTGTGAAGCTT+CGG | 0.397554 | 7_2:-43575573 | Msa1058600:CDS |
| ATCTTATTGCAATTCTGAAA+CGG | 0.407398 | 7_2:-43576661 | Msa1058600:CDS |
| CGAAGGACTGACCGCCTTAG+TGG | 0.415766 | 7_2:-43575689 | Msa1058600:CDS |
| CATATAATCTCTCATGTGTA+TGG | 0.418987 | 7_2:+43574427 | None:intergenic |
| TAAAGAGATCTAATAATCTC+AGG | 0.432817 | 7_2:+43574909 | None:intergenic |
| ACAGTAAAGAGCCATTATAA+AGG | 0.435840 | 7_2:+43574366 | None:intergenic |
| TGAACCCTTTGTTAATTGGC+TGG | 0.438818 | 7_2:-43574665 | Msa1058600:CDS |
| TTCTAAAAGTTACCTTGCGC+AGG | 0.440169 | 7_2:+43575440 | None:intergenic |
| TTATAATGGCTCTTTACTGT+TGG | 0.449581 | 7_2:-43574363 | Msa1058600:three_prime_UTR |
| CAATATCAAAGAAAGAGAAC+CGG | 0.453965 | 7_2:+43574559 | None:intergenic |
| TTACTCCATAATAGAGTATG+AGG | 0.462138 | 7_2:-43576990 | Msa1058600:CDS |
| TGCAGTGGTCCAGATTTACT+TGG | 0.462561 | 7_2:-43577887 | Msa1058600:CDS |
| CTTTCGATCCCAATTCGTCT+TGG | 0.463552 | 7_2:-43578927 | Msa1058600:five_prime_UTR |
| CGAATTGGGATCGAAAGATC+GGG | 0.466148 | 7_2:+43578933 | None:intergenic |
| CTTTGTTAATTGGCTGGAGG+AGG | 0.471043 | 7_2:-43574659 | Msa1058600:CDS |
| GCGAAGATTCCTCCAGTCCT+TGG | 0.473428 | 7_2:-43576876 | Msa1058600:CDS |
| TCAAGGTTCTTGATGAGAAA+CGG | 0.475661 | 7_2:+43576908 | None:intergenic |
| CTCATAAACCAAGACGAATT+GGG | 0.475794 | 7_2:+43578919 | None:intergenic |
| CACCAGTGGAAAACTTGAGC+TGG | 0.479827 | 7_2:-43574991 | Msa1058600:CDS |
| CAGATTTACTTGGATAATGC+TGG | 0.481155 | 7_2:-43577877 | Msa1058600:CDS |
| GGAAAATGAGAGGAAGAAGT+TGG | 0.488658 | 7_2:-43576843 | Msa1058600:CDS |
| ACGAATTGGGATCGAAAGAT+CGG | 0.493650 | 7_2:+43578932 | None:intergenic |
| AAATGTCAGAACTAGCCCTT+TGG | 0.495437 | 7_2:+43576730 | None:intergenic |
| TTTACGGAACCAATGAAGAA+TGG | 0.495521 | 7_2:+43574860 | None:intergenic |
| TCCAAGGAGAAACCCACTCT+CGG | 0.497510 | 7_2:-43578422 | Msa1058600:CDS |
| TCATACTCTATTATGGAGTA+AGG | 0.497993 | 7_2:+43576992 | None:intergenic |
| AGTGGTTGGAACACAGTCTC+CGG | 0.501491 | 7_2:+43576773 | None:intergenic |
| TCTTTATGAACAGGATGTGC+TGG | 0.504838 | 7_2:-43574892 | Msa1058600:CDS |
| ACTGCATCAGCAAATGCTGC+AGG | 0.510392 | 7_2:+43577904 | None:intergenic |
| ATTCTTCATTGGTTCCGTAA+AGG | 0.516452 | 7_2:-43574858 | Msa1058600:CDS |
| CCAAGGAGAAACCCACTCTC+GGG | 0.525442 | 7_2:-43578421 | Msa1058600:intron |
| GGTTATCTTTAAGAAGTGGT+TGG | 0.526466 | 7_2:+43576759 | None:intergenic |
| CAAATACTCCTTAAAGAAGT+CGG | 0.527140 | 7_2:+43576703 | None:intergenic |
| TAATGAAAAGAAGATATTTG+AGG | 0.528032 | 7_2:-43575662 | Msa1058600:CDS |
| CCATAAGATCCGCACAATCT+CGG | 0.529098 | 7_2:+43575525 | None:intergenic |
| TTGTGTTTCTTGCAGCTCCA+AGG | 0.530041 | 7_2:-43578438 | Msa1058600:intron |
| AAGATAACCTTGTGGCCAAA+GGG | 0.531045 | 7_2:-43576745 | Msa1058600:CDS |
| TGCAAATGCAGCCCTGCGCA+AGG | 0.531308 | 7_2:-43575452 | Msa1058600:intron |
| GACCTCAACTTCTCAAGATA+CGG | 0.533157 | 7_2:-43577704 | Msa1058600:CDS |
| GAACTAGCCCTTTGGCCACA+AGG | 0.538546 | 7_2:+43576738 | None:intergenic |
| TCCTCCAGCCAATTAACAAA+GGG | 0.539906 | 7_2:+43574661 | None:intergenic |
| TCTCATGAATTTGATGTGCC+TGG | 0.540781 | 7_2:-43574528 | Msa1058600:three_prime_UTR |
| AAAGATAACCTTGTGGCCAA+AGG | 0.542559 | 7_2:-43576746 | Msa1058600:CDS |
| ACAAGGTTATCTTTAAGAAG+TGG | 0.544733 | 7_2:+43576755 | None:intergenic |
| CGAAATAGATTATTAGTACC+AGG | 0.552432 | 7_2:+43574510 | None:intergenic |
| TGGATGCTGTTCAGTGGTCA+GGG | 0.553502 | 7_2:-43575492 | Msa1058600:CDS |
| TTGGCTGGAGGAGGCTGAAG+AGG | 0.559602 | 7_2:-43574650 | Msa1058600:CDS |
| CACCGTATCTTGAGAAGTTG+AGG | 0.561957 | 7_2:+43577702 | None:intergenic |
| CGCGGATTAAGACCCGCAAA+CGG | 0.562108 | 7_2:-43577948 | Msa1058600:CDS |
| TCATTAATTTGTCTTACGAT+CGG | 0.568345 | 7_2:-43574151 | Msa1058600:three_prime_UTR |
| GGAACTACCAAGCCCGATGA+GGG | 0.569765 | 7_2:-43577025 | Msa1058600:CDS |
| TGCAAGCACCACGGTACATG+AGG | 0.577827 | 7_2:+43574456 | None:intergenic |
| TTGAATACTTTCTGCACCAG+TGG | 0.578411 | 7_2:-43575005 | Msa1058600:CDS |
| TTTATTAGCTGTCTAACGCA+AGG | 0.580911 | 7_2:-43574307 | Msa1058600:three_prime_UTR |
| TGCAGCATTTGCTGATGCAG+TGG | 0.583776 | 7_2:-43577902 | Msa1058600:CDS |
| TGGTAGTTCCAGGTTGTGTG+CGG | 0.583923 | 7_2:+43577038 | None:intergenic |
| AATATCAAAGAAAGAGAACC+GGG | 0.584559 | 7_2:+43574560 | None:intergenic |
| AAAGAGATCTAATAATCTCA+GGG | 0.586643 | 7_2:+43574910 | None:intergenic |
| CTACTCGGTGATGATTGTTG+GGG | 0.587083 | 7_2:+43578962 | None:intergenic |
| GCAAATGCTGCAGGGTCCAG+AGG | 0.587237 | 7_2:+43577913 | None:intergenic |
| TTCTGTATGTAGATCACAGA+TGG | 0.589103 | 7_2:+43576947 | None:intergenic |
| GCTGGAGGAGGCTGAAGAGG+AGG | 0.590216 | 7_2:-43574647 | Msa1058600:CDS |
| AAACTGCTTACCTTCCTTTG+GGG | 0.590607 | 7_2:+43574829 | None:intergenic |
| ATGCTCAGAGAAAGACTCGT+TGG | 0.591713 | 7_2:+43576589 | None:intergenic |
| AGTACAGATGCAATGCTATG+AGG | 0.592013 | 7_2:-43574955 | Msa1058600:CDS |
| CTCCTCCAGCCAATTAACAA+AGG | 0.595041 | 7_2:+43574660 | None:intergenic |
| CTTATTGCAATTCTGAAACG+GGG | 0.596539 | 7_2:-43576659 | Msa1058600:CDS |
| ACTCTATTATGGAGTAAGGA+TGG | 0.598666 | 7_2:+43576996 | None:intergenic |
| GATATTTGAGGTGACACTCA+AGG | 0.598773 | 7_2:-43575650 | Msa1058600:CDS |
| GAAGCTATCTGGTCTCCCAC+CGG | 0.602610 | 7_2:-43576792 | Msa1058600:CDS |
| GGTTGGAACACAGTCTCCGG+TGG | 0.605569 | 7_2:+43576776 | None:intergenic |
| TCTAAAAGTTACCTTGCGCA+GGG | 0.606161 | 7_2:+43575441 | None:intergenic |
| ACCCTTTGTTAATTGGCTGG+AGG | 0.606550 | 7_2:-43574662 | Msa1058600:CDS |
| ATGAGAGATTATATGCTACA+TGG | 0.610280 | 7_2:-43574419 | Msa1058600:three_prime_UTR |
| AAGGAACAAACCCCAAAGGA+AGG | 0.612722 | 7_2:-43574839 | Msa1058600:intron |
| TTACGATAAAGGTGAAAACA+TGG | 0.615139 | 7_2:-43575037 | Msa1058600:intron |
| TGCCTGAAACCGAGATTGTG+CGG | 0.618084 | 7_2:-43575534 | Msa1058600:CDS |
| TTCATTATACTCCACTAAGG+CGG | 0.628716 | 7_2:+43575678 | None:intergenic |
| TACTCGGTGATGATTGTTGG+GGG | 0.632957 | 7_2:+43578963 | None:intergenic |
| AAGATCGGGGAGTCTCTACT+CGG | 0.637025 | 7_2:+43578947 | None:intergenic |
| TGGAACTACCAAGCCCGATG+AGG | 0.639429 | 7_2:-43577026 | Msa1058600:CDS |
| GGGTTCAAGTGCCTTCACAA+AGG | 0.639968 | 7_2:+43574681 | None:intergenic |
| CTGCATCAGCAAATGCTGCA+GGG | 0.640670 | 7_2:+43577905 | None:intergenic |
| GTACAGGCAAACCTTTGTGA+AGG | 0.645045 | 7_2:-43574692 | Msa1058600:intron |
| TCTTAATCACCAGTGGCACG+CGG | 0.645729 | 7_2:-43577966 | Msa1058600:intron |
| ATCTGTGATCTACATACAGA+AGG | 0.646244 | 7_2:-43576945 | Msa1058600:CDS |
| TACGATAAAGGTGAAAACAT+GGG | 0.653706 | 7_2:-43575036 | Msa1058600:intron |
| AGGAGGAATGAATGTAGCGG+AGG | 0.657184 | 7_2:-43574630 | Msa1058600:exon |
| GAACTACCAAGCCCGATGAG+GGG | 0.657803 | 7_2:-43577024 | Msa1058600:CDS |
| GCAAGCACCACGGTACATGA+GGG | 0.661713 | 7_2:+43574457 | None:intergenic |
| GTTGGAACACAGTCTCCGGT+GGG | 0.671828 | 7_2:+43576777 | None:intergenic |
| CGTAAAGGAACAAACCCCAA+AGG | 0.672014 | 7_2:-43574843 | Msa1058600:CDS |
| AACAACACAGATAACAGAGG+AGG | 0.672429 | 7_2:-43575611 | Msa1058600:CDS |
| AAGAGGAGGAATGAATGTAG+CGG | 0.684370 | 7_2:-43574633 | Msa1058600:exon |
| GAATTGCAATAAGATCATCA+AGG | 0.697178 | 7_2:+43576669 | None:intergenic |
| GAATTGGGATCGAAAGATCG+GGG | 0.699765 | 7_2:+43578934 | None:intergenic |
| TTTAACAACACAGATAACAG+AGG | 0.703724 | 7_2:-43575614 | Msa1058600:CDS |
| TGGAAAACATGCAAGCACCA+CGG | 0.715493 | 7_2:+43574447 | None:intergenic |
| CACGGTACATGAGGGCACGG+CGG | 0.717138 | 7_2:+43574465 | None:intergenic |
| ACTTCTTAAAGATAACCTTG+TGG | 0.720062 | 7_2:-43576753 | Msa1058600:CDS |
| GACCCGCAAACGGAACATCG+CGG | 0.725384 | 7_2:-43577938 | Msa1058600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTGATTATTTTCAGTTA+TGG | - | chr7_2:43574430-43574449 | Msa1058600:three_prime_UTR | 15.0% |
| !!! | TTTTGATTATTTTCAGTTAT+GGG | - | chr7_2:43574431-43574450 | Msa1058600:three_prime_UTR | 15.0% |
| !!! | TATAAATAATTTGTCATGAT+TGG | - | chr7_2:43574562-43574581 | Msa1058600:three_prime_UTR | 15.0% |
| !! | AGAGAATAAATTAATTAAGT+GGG | + | chr7_2:43574957-43574976 | None:intergenic | 15.0% |
| !! | ATTGAATGATTTATGTTTAT+AGG | - | chr7_2:43575428-43575447 | Msa1058600:intron | 15.0% |
| !!! | TTCAAAATGTTTTATATATC+AGG | - | chr7_2:43576670-43576689 | Msa1058600:CDS | 15.0% |
| !!! | AAGTGAAATATTCTTTTAAA+AGG | - | chr7_2:43576862-43576881 | Msa1058600:CDS | 15.0% |
| !!! | AGTGAAATATTCTTTTAAAA+GGG | - | chr7_2:43576863-43576882 | Msa1058600:CDS | 15.0% |
| !!! | GTGATATTATTATTTTTGAA+TGG | - | chr7_2:43577349-43577368 | Msa1058600:intron | 15.0% |
| !!! | ATGTTTTTTTTCCTTTATAA+TGG | - | chr7_2:43578807-43578826 | Msa1058600:intron | 15.0% |
| !! | TCAAACAATAATCAACAAAA+AGG | + | chr7_2:43574695-43574714 | None:intergenic | 20.0% |
| !! | TCAATTATTTCACTAACATA+GGG | - | chr7_2:43574929-43574948 | Msa1058600:CDS | 20.0% |
| !! | CAGAGAATAAATTAATTAAG+TGG | + | chr7_2:43574958-43574977 | None:intergenic | 20.0% |
| !! | AATTAATTTATTCTCTGTGA+AGG | - | chr7_2:43574961-43574980 | Msa1058600:CDS | 20.0% |
| !! | ATTAATTTATTCTCTGTGAA+GGG | - | chr7_2:43574962-43574981 | Msa1058600:CDS | 20.0% |
| !! | TTCAAAACTTGAGTATTTAA+AGG | + | chr7_2:43575890-43575909 | None:intergenic | 20.0% |
| !!! | AAATCTGAAACTATAATCAT+TGG | + | chr7_2:43575938-43575957 | None:intergenic | 20.0% |
| !!! | ATGATTATAGTTTCAGATTT+TGG | - | chr7_2:43575938-43575957 | Msa1058600:intron | 20.0% |
| !!! | TTTCAGATTTTGGTAAAAAT+AGG | - | chr7_2:43575948-43575967 | Msa1058600:intron | 20.0% |
| !! | TCTTACAAATCATTTAATGT+AGG | - | chr7_2:43576107-43576126 | Msa1058600:intron | 20.0% |
| !!! | AAAAGTTGAAGATAATCTTT+TGG | - | chr7_2:43576548-43576567 | Msa1058600:intron | 20.0% |
| !! | AAATAAAATAGAAGAACCAT+TGG | + | chr7_2:43576716-43576735 | None:intergenic | 20.0% |
| !!! | CTTCTATTTTATTTTGCTTT+TGG | - | chr7_2:43576722-43576741 | Msa1058600:CDS | 20.0% |
| !! | TATGAATGATTTATTATTGC+AGG | - | chr7_2:43576774-43576793 | Msa1058600:CDS | 20.0% |
| !!! | GAATTAAAACATTTGCTAAT+TGG | - | chr7_2:43577123-43577142 | Msa1058600:intron | 20.0% |
| !!! | GAGCAATATATTTTTTTGAA+CGG | - | chr7_2:43577198-43577217 | Msa1058600:intron | 20.0% |
| !! | TAATGAAAAGAAGATATTTG+AGG | - | chr7_2:43577522-43577541 | Msa1058600:intron | 20.0% |
| !!! | TTATACATGATTATGCTTTT+AGG | - | chr7_2:43578026-43578045 | Msa1058600:intron | 20.0% |
| !!! | TATACATGATTATGCTTTTA+GGG | - | chr7_2:43578027-43578046 | Msa1058600:intron | 20.0% |
| ! | GGAAAAAGAAGAAAGAAAAA+AGG | + | chr7_2:43574169-43574188 | None:intergenic | 25.0% |
| ! | TGTTAGTGAAATAATTGAGT+TGG | + | chr7_2:43574927-43574946 | None:intergenic | 25.0% |
| ! | CTCAATTATTTCACTAACAT+AGG | - | chr7_2:43574928-43574947 | Msa1058600:CDS | 25.0% |
| ! | CATCTACAATTTGCATAAAA+TGG | + | chr7_2:43575036-43575055 | None:intergenic | 25.0% |
| !! | TGTTCATATAATCTGTTTTG+AGG | - | chr7_2:43575178-43575197 | Msa1058600:intron | 25.0% |
| ! | ATACTACAACTATTGTAGTT+TGG | - | chr7_2:43575677-43575696 | Msa1058600:CDS | 25.0% |
| !!! | TAATCATTGGTCTATTTTAC+AGG | + | chr7_2:43575925-43575944 | None:intergenic | 25.0% |
| ! | AATGGCGTAAGAAAATTAAA+TGG | + | chr7_2:43575986-43576005 | None:intergenic | 25.0% |
| !! | TAGATACTAAAGCATCAATT+AGG | - | chr7_2:43576009-43576028 | Msa1058600:intron | 25.0% |
| !! | ATGATTTGTAAGACAATTGT+AGG | + | chr7_2:43576100-43576119 | None:intergenic | 25.0% |
| !!! | TTAATGTAGGTTATTTTCAC+TGG | - | chr7_2:43576120-43576139 | Msa1058600:intron | 25.0% |
| !!! | TAATGTAGGTTATTTTCACT+GGG | - | chr7_2:43576121-43576140 | Msa1058600:intron | 25.0% |
| !! | ATTTATAACCGACTTCTTTA+AGG | - | chr7_2:43576473-43576492 | Msa1058600:intron | 25.0% |
| !! | ATCTTATTGCAATTCTGAAA+CGG | - | chr7_2:43576523-43576542 | Msa1058600:intron | 25.0% |
| ! | TCATTAAAATTAGGCTCAAA+AGG | + | chr7_2:43576809-43576828 | None:intergenic | 25.0% |
| !!! | AAATATTCTTTTAAAAGGGC+AGG | - | chr7_2:43576867-43576886 | Msa1058600:CDS | 25.0% |
| ! | TCAAATCTAAATTAGTGTTC+TGG | - | chr7_2:43576893-43576912 | Msa1058600:CDS | 25.0% |
| ! | CAAATCTAAATTAGTGTTCT+GGG | - | chr7_2:43576894-43576913 | Msa1058600:CDS | 25.0% |
| ! | AAATCTAAATTAGTGTTCTG+GGG | - | chr7_2:43576895-43576914 | Msa1058600:CDS | 25.0% |
| ! | ATAAAATGCATTAATGCTAG+TGG | - | chr7_2:43577032-43577051 | Msa1058600:CDS | 25.0% |
| ! | TTCATATAATTCCAAACTGT+AGG | + | chr7_2:43577079-43577098 | None:intergenic | 25.0% |
| ! | AAGCAAATAATATGAAACAG+TGG | + | chr7_2:43577103-43577122 | None:intergenic | 25.0% |
| !! | TCTATCTGTTTGAAATATCT+TGG | - | chr7_2:43577176-43577195 | Msa1058600:intron | 25.0% |
| !! | TTCTATCTGTTTGAAATATC+TGG | - | chr7_2:43577175-43577194 | Msa1058600:intron | 25.0% |
| !! | TCTATCTGTTTGAAATATCT+GGG | - | chr7_2:43577176-43577195 | Msa1058600:intron | 25.0% |
| !! | TACTTTGTTATACTGTACAT+TGG | - | chr7_2:43577789-43577808 | Msa1058600:intron | 25.0% |
| ! | AAAGAGATCTAATAATCTCA+GGG | + | chr7_2:43578277-43578296 | None:intergenic | 25.0% |
| ! | TAAAGAGATCTAATAATCTC+AGG | + | chr7_2:43578278-43578297 | None:intergenic | 25.0% |
| ! | TATTAGATCTCTTTATGAAC+AGG | - | chr7_2:43578283-43578302 | Msa1058600:intron | 25.0% |
| ! | TACAGTTGCTTATTTATAAC+TGG | - | chr7_2:43578470-43578489 | Msa1058600:intron | 25.0% |
| !! | AATCGTTTCTTCAATTTTGA+TGG | - | chr7_2:43578850-43578869 | Msa1058600:intron | 25.0% |
| !! | AAGGATTATAATGCATTTTG+TGG | - | chr7_2:43578896-43578915 | Msa1058600:intron | 25.0% |
| !!! | AACACATTTCACTGTTTTAA+TGG | + | chr7_2:43578963-43578982 | None:intergenic | 25.0% |
| !!! | TCATTAATTTGTCTTACGAT+CGG | - | chr7_2:43579033-43579052 | Msa1058600:five_prime_UTR | 25.0% |
| CTGAAAGATTTGCATAAACA+TGG | + | chr7_2:43574378-43574397 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCGCAAAATCGAAT+GGG | + | chr7_2:43574406-43574425 | None:intergenic | 30.0% |
| ATCTTAGATCTAGAGAGTTA+TGG | - | chr7_2:43574455-43574474 | Msa1058600:three_prime_UTR | 30.0% | |
| AGAAAACCTAATGAACGAAA+GGG | + | chr7_2:43574512-43574531 | None:intergenic | 30.0% | |
| AAGAAAACCTAATGAACGAA+AGG | + | chr7_2:43574513-43574532 | None:intergenic | 30.0% | |
| ATAAAAAGAACAGTCAATGG+AGG | + | chr7_2:43574809-43574828 | None:intergenic | 30.0% | |
| GACATAAAAAGAACAGTCAA+TGG | + | chr7_2:43574812-43574831 | None:intergenic | 30.0% | |
| !! | TTGTTTTTCTTAATCACCAG+TGG | - | chr7_2:43575211-43575230 | Msa1058600:intron | 30.0% |
| ATGTTTACACACAAAGATTC+AGG | + | chr7_2:43575733-43575752 | None:intergenic | 30.0% | |
| AGAATGGTATACAAAGAGTA+GGG | + | chr7_2:43575814-43575833 | None:intergenic | 30.0% | |
| ATGCTTTAGTATCTAGTCAA+TGG | + | chr7_2:43576004-43576023 | None:intergenic | 30.0% | |
| TTTGTAAGACAATTGTAGGT+TGG | + | chr7_2:43576096-43576115 | None:intergenic | 30.0% | |
| !! | AATGTAGGTTATTTTCACTG+GGG | - | chr7_2:43576122-43576141 | Msa1058600:intron | 30.0% |
| TCATACTCTATTATGGAGTA+AGG | + | chr7_2:43576195-43576214 | None:intergenic | 30.0% | |
| TTACTCCATAATAGAGTATG+AGG | - | chr7_2:43576194-43576213 | Msa1058600:intron | 30.0% | |
| ! | ACAAGGTTATCTTTAAGAAG+TGG | + | chr7_2:43576432-43576451 | None:intergenic | 30.0% |
| ACTTCTTAAAGATAACCTTG+TGG | - | chr7_2:43576431-43576450 | Msa1058600:intron | 30.0% | |
| CAAATACTCCTTAAAGAAGT+CGG | + | chr7_2:43576484-43576503 | None:intergenic | 30.0% | |
| GAATTGCAATAAGATCATCA+AGG | + | chr7_2:43576518-43576537 | None:intergenic | 30.0% | |
| !! | TCTTATTGCAATTCTGAAAC+GGG | - | chr7_2:43576524-43576543 | Msa1058600:intron | 30.0% |
| !! | ATTTTATTTGTCTGAGCCAA+TGG | - | chr7_2:43576697-43576716 | Msa1058600:CDS | 30.0% |
| TTCATAGAATGAGATCATCA+AGG | + | chr7_2:43576760-43576779 | None:intergenic | 30.0% | |
| ! | AAAATTTTGTGATGCAGTTC+AGG | + | chr7_2:43577010-43577029 | None:intergenic | 30.0% |
| ! | CTTTTCATTATACTCCACTA+AGG | + | chr7_2:43577512-43577531 | None:intergenic | 30.0% |
| TTTAACAACACAGATAACAG+AGG | - | chr7_2:43577570-43577589 | Msa1058600:intron | 30.0% | |
| !! | GATCTTATGGGATGTTTTAA+TGG | - | chr7_2:43577672-43577691 | Msa1058600:intron | 30.0% |
| !!! | GTAACTTTTAGAATCTTGCT+TGG | - | chr7_2:43577754-43577773 | Msa1058600:intron | 30.0% |
| !! | ACATTGGTTTCCTATTGAAT+AGG | - | chr7_2:43577805-43577824 | Msa1058600:intron | 30.0% |
| TACATCAGTTCCTATTCAAT+AGG | + | chr7_2:43577818-43577837 | None:intergenic | 30.0% | |
| CAATGAACATATTACAGTCA+AGG | + | chr7_2:43577896-43577915 | None:intergenic | 30.0% | |
| CTTGACTGTAATATGTTCAT+TGG | - | chr7_2:43577894-43577913 | Msa1058600:CDS | 30.0% | |
| !! | ATGATTATGCTTTTAGGGAA+TGG | - | chr7_2:43578032-43578051 | Msa1058600:intron | 30.0% |
| TTTCTCAATAAGCAATCAGA+TGG | + | chr7_2:43578063-43578082 | None:intergenic | 30.0% | |
| TTACGATAAAGGTGAAAACA+TGG | - | chr7_2:43578147-43578166 | Msa1058600:intron | 30.0% | |
| TACGATAAAGGTGAAAACAT+GGG | - | chr7_2:43578148-43578167 | Msa1058600:intron | 30.0% | |
| TGCTTATTTATAACTGGTAC+AGG | - | chr7_2:43578476-43578495 | Msa1058600:intron | 30.0% | |
| AATATCAAAGAAAGAGAACC+GGG | + | chr7_2:43578627-43578646 | None:intergenic | 30.0% | |
| CAATATCAAAGAAAGAGAAC+CGG | + | chr7_2:43578628-43578647 | None:intergenic | 30.0% | |
| CGAAATAGATTATTAGTACC+AGG | + | chr7_2:43578677-43578696 | None:intergenic | 30.0% | |
| CATATAATCTCTCATGTGTA+TGG | + | chr7_2:43578760-43578779 | None:intergenic | 30.0% | |
| ATGAGAGATTATATGCTACA+TGG | - | chr7_2:43578765-43578784 | Msa1058600:intron | 30.0% | |
| ACAGTAAAGAGCCATTATAA+AGG | + | chr7_2:43578821-43578840 | None:intergenic | 30.0% | |
| TTATAATGGCTCTTTACTGT+TGG | - | chr7_2:43578821-43578840 | Msa1058600:intron | 30.0% | |
| ! | TCTAATTTTCAGACAACTCT+TGG | - | chr7_2:43579000-43579019 | Msa1058600:five_prime_UTR | 30.0% |
| AAAAAGGACAGAACTGAGTT+CGG | + | chr7_2:43574153-43574172 | None:intergenic | 35.0% | |
| CTCATAAACCAAGACGAATT+GGG | + | chr7_2:43574268-43574287 | None:intergenic | 35.0% | |
| !!! | CGTTTTTTCGCAAAATCGAA+TGG | + | chr7_2:43574407-43574426 | None:intergenic | 35.0% |
| CTAGAGAGTTATGGCTAATT+AGG | - | chr7_2:43574464-43574483 | Msa1058600:three_prime_UTR | 35.0% | |
| AAAACCTAATGAACGAAAGG+GGG | + | chr7_2:43574510-43574529 | None:intergenic | 35.0% | |
| GAAAACCTAATGAACGAAAG+GGG | + | chr7_2:43574511-43574530 | None:intergenic | 35.0% | |
| TAAAAATCTTACCCGAGAGT+GGG | + | chr7_2:43574777-43574796 | None:intergenic | 35.0% | |
| CAGCATTATCCAAGTAAATC+TGG | + | chr7_2:43575309-43575328 | None:intergenic | 35.0% | |
| CAGATTTACTTGGATAATGC+TGG | - | chr7_2:43575307-43575326 | Msa1058600:intron | 35.0% | |
| TAGTAAGCTTGCCTCAAAAA+AGG | + | chr7_2:43575511-43575530 | None:intergenic | 35.0% | |
| ! | AGAGACAACAAATTTTCTGC+TGG | + | chr7_2:43575536-43575555 | None:intergenic | 35.0% |
| TCCTATTTCGATATGACTGT+AGG | - | chr7_2:43575587-43575606 | Msa1058600:CDS | 35.0% | |
| TCCTACAGTCATATCGAAAT+AGG | + | chr7_2:43575591-43575610 | None:intergenic | 35.0% | |
| ! | GGGAGATACTATTCTTTTTC+AGG | + | chr7_2:43575794-43575813 | None:intergenic | 35.0% |
| GAGAATGGTATACAAAGAGT+AGG | + | chr7_2:43575815-43575834 | None:intergenic | 35.0% | |
| ATACTGAATAATGTGGAGAC+TGG | + | chr7_2:43575853-43575872 | None:intergenic | 35.0% | |
| GTCTACGATACTGAATAATG+TGG | + | chr7_2:43575860-43575879 | None:intergenic | 35.0% | |
| TCAATGTTCTCAATGCTTTG+TGG | - | chr7_2:43576045-43576064 | Msa1058600:intron | 35.0% | |
| !! | ATGTAGGTTATTTTCACTGG+GGG | - | chr7_2:43576123-43576142 | Msa1058600:intron | 35.0% |
| ACTCTATTATGGAGTAAGGA+TGG | + | chr7_2:43576191-43576210 | None:intergenic | 35.0% | |
| TGTTGCCTCATACTCTATTA+TGG | + | chr7_2:43576202-43576221 | None:intergenic | 35.0% | |
| TTCTGTATGTAGATCACAGA+TGG | + | chr7_2:43576240-43576259 | None:intergenic | 35.0% | |
| ATCTGTGATCTACATACAGA+AGG | - | chr7_2:43576239-43576258 | Msa1058600:intron | 35.0% | |
| ! | TCTACATACAGAAGGTTTTG+CGG | - | chr7_2:43576247-43576266 | Msa1058600:intron | 35.0% |
| TCAAGGTTCTTGATGAGAAA+CGG | + | chr7_2:43576279-43576298 | None:intergenic | 35.0% | |
| ! | ATTTTCCTCAAAAAGCTCCA+AGG | + | chr7_2:43576328-43576347 | None:intergenic | 35.0% |
| !! | AGCTTTTTGAGGAAAATGAG+AGG | - | chr7_2:43576331-43576350 | Msa1058600:intron | 35.0% |
| ! | GGTTATCTTTAAGAAGTGGT+TGG | + | chr7_2:43576428-43576447 | None:intergenic | 35.0% |
| !! | CTTATTGCAATTCTGAAACG+GGG | - | chr7_2:43576525-43576544 | Msa1058600:intron | 35.0% |
| ! | TAAAGATGCATCCTTTTCAC+TGG | + | chr7_2:43576640-43576659 | None:intergenic | 35.0% |
| TCCAAACTGTAGGTATCATA+CGG | + | chr7_2:43577069-43577088 | None:intergenic | 35.0% | |
| AACCATTGTGTCCAATTATC+TGG | - | chr7_2:43577236-43577255 | Msa1058600:intron | 35.0% | |
| ACCATTGTGTCCAATTATCT+GGG | - | chr7_2:43577237-43577256 | Msa1058600:intron | 35.0% | |
| ATCAATCACTCCCAGATAAT+TGG | + | chr7_2:43577250-43577269 | None:intergenic | 35.0% | |
| !! | TGTCAACTTTTTAGCAACGA+AGG | - | chr7_2:43577478-43577497 | Msa1058600:intron | 35.0% |
| TTCATTATACTCCACTAAGG+CGG | + | chr7_2:43577509-43577528 | None:intergenic | 35.0% | |
| TTATTGAGACTGTGAAGCTT+CGG | - | chr7_2:43577611-43577630 | Msa1058600:intron | 35.0% | |
| !! | TTTTAATGGATGCTGTTCAG+TGG | - | chr7_2:43577686-43577705 | Msa1058600:intron | 35.0% |
| CAGTCAAGGACATTGTATTA+CGG | + | chr7_2:43577882-43577901 | None:intergenic | 35.0% | |
| GATGCTGTTAATACACAGTT+TGG | - | chr7_2:43578002-43578021 | Msa1058600:intron | 35.0% | |
| ATATCAGCATGAATACTGAC+TGG | + | chr7_2:43578087-43578106 | None:intergenic | 35.0% | |
| CATCACTCTGTTTACGATAA+AGG | - | chr7_2:43578136-43578155 | Msa1058600:intron | 35.0% | |
| CTGAAGATACCATTCTTCAT+TGG | - | chr7_2:43578315-43578334 | Msa1058600:intron | 35.0% | |
| TTTACGGAACCAATGAAGAA+TGG | + | chr7_2:43578327-43578346 | None:intergenic | 35.0% | |
| !! | ATTCTTCATTGGTTCCGTAA+AGG | - | chr7_2:43578326-43578345 | Msa1058600:intron | 35.0% |
| AAAACTGCTTACCTTCCTTT+GGG | + | chr7_2:43578359-43578378 | None:intergenic | 35.0% | |
| AAAAACTGCTTACCTTCCTT+TGG | + | chr7_2:43578360-43578379 | None:intergenic | 35.0% | |
| CACTTGAACCCTTTGTTAAT+TGG | - | chr7_2:43578515-43578534 | Msa1058600:intron | 35.0% | |
| ! | AGCTCTTTTGTATCATTACC+CGG | - | chr7_2:43578606-43578625 | Msa1058600:intron | 35.0% |
| TTTATTAGCTGTCTAACGCA+AGG | - | chr7_2:43578877-43578896 | Msa1058600:intron | 35.0% | |
| ! | TCTACTCGGTGATGATTGTT+GGG | + | chr7_2:43574226-43574245 | None:intergenic | 40.0% |
| ACGAATTGGGATCGAAAGAT+CGG | + | chr7_2:43574255-43574274 | None:intergenic | 40.0% | |
| CCTCATAAACCAAGACGAAT+TGG | + | chr7_2:43574269-43574288 | None:intergenic | 40.0% | |
| CCAATTCGTCTTGGTTTATG+AGG | - | chr7_2:43574266-43574285 | Msa1058600:three_prime_UTR | 40.0% | |
| GTAAAAATCTTACCCGAGAG+TGG | + | chr7_2:43574778-43574797 | None:intergenic | 40.0% | |
| CTTGGATAATGCTGGTGATT+TGG | - | chr7_2:43575315-43575334 | Msa1058600:intron | 40.0% | |
| !! | CACACACTGTCATGTTTTGA+TGG | - | chr7_2:43575392-43575411 | Msa1058600:intron | 40.0% |
| GACCTCAACTTCTCAAGATA+CGG | - | chr7_2:43575480-43575499 | Msa1058600:CDS | 40.0% | |
| !!! | ATACGGTGACACCTTTTTTG+AGG | - | chr7_2:43575497-43575516 | Msa1058600:CDS | 40.0% |
| TCTTTGTATACCATTCTCCC+AGG | - | chr7_2:43575817-43575836 | Msa1058600:intron | 40.0% | |
| CTTTGTATACCATTCTCCCA+GGG | - | chr7_2:43575818-43575837 | Msa1058600:intron | 40.0% | |
| TTTGTATACCATTCTCCCAG+GGG | - | chr7_2:43575819-43575838 | Msa1058600:intron | 40.0% | |
| ! | ATCTTCGCGTGACATTTTCA+AGG | + | chr7_2:43576296-43576315 | None:intergenic | 40.0% |
| GGAAAATGAGAGGAAGAAGT+TGG | - | chr7_2:43576341-43576360 | Msa1058600:intron | 40.0% | |
| AAAGATAACCTTGTGGCCAA+AGG | - | chr7_2:43576438-43576457 | Msa1058600:intron | 40.0% | |
| AAGATAACCTTGTGGCCAAA+GGG | - | chr7_2:43576439-43576458 | Msa1058600:intron | 40.0% | |
| AAATGTCAGAACTAGCCCTT+TGG | + | chr7_2:43576457-43576476 | None:intergenic | 40.0% | |
| !!! | ACTCGTTGGTTCTTTTTGCA+GGG | + | chr7_2:43576584-43576603 | None:intergenic | 40.0% |
| AGTCTTTCTCTGAGCATTTC+AGG | - | chr7_2:43576601-43576620 | Msa1058600:CDS | 40.0% | |
| !! | TTGAGCATTGGCAGAAAAGA+GGG | + | chr7_2:43576959-43576978 | None:intergenic | 40.0% |
| AACTGTAGGTATCATACGGT+TGG | + | chr7_2:43577065-43577084 | None:intergenic | 40.0% | |
| ACCGTATGATACCTACAGTT+TGG | - | chr7_2:43577065-43577084 | Msa1058600:intron | 40.0% | |
| TCCCAGATAATTGGACACAA+TGG | + | chr7_2:43577241-43577260 | None:intergenic | 40.0% | |
| ! | AAGCACTGTATCCAGTTATC+TGG | - | chr7_2:43577387-43577406 | Msa1058600:intron | 40.0% |
| AGCACTGTATCCAGTTATCT+GGG | - | chr7_2:43577388-43577407 | Msa1058600:intron | 40.0% | |
| ATCAATCACTCCCAGATAAC+TGG | + | chr7_2:43577401-43577420 | None:intergenic | 40.0% | |
| ! | GATATTTGAGGTGACACTCA+AGG | - | chr7_2:43577534-43577553 | Msa1058600:intron | 40.0% |
| AACAACACAGATAACAGAGG+AGG | - | chr7_2:43577573-43577592 | Msa1058600:intron | 40.0% | |
| TATTGAGACTGTGAAGCTTC+GGG | - | chr7_2:43577612-43577631 | Msa1058600:intron | 40.0% | |
| TCTAAAAGTTACCTTGCGCA+GGG | + | chr7_2:43577746-43577765 | None:intergenic | 40.0% | |
| ! | TTCTAAAAGTTACCTTGCGC+AGG | + | chr7_2:43577747-43577766 | None:intergenic | 40.0% |
| AGGACATTGTATTACGGTCA+GGG | + | chr7_2:43577876-43577895 | None:intergenic | 40.0% | |
| AAGGACATTGTATTACGGTC+AGG | + | chr7_2:43577877-43577896 | None:intergenic | 40.0% | |
| TGTTCTGTGCGTTATTGTTG+AGG | - | chr7_2:43577938-43577957 | Msa1058600:CDS | 40.0% | |
| GTTCTGTGCGTTATTGTTGA+GGG | - | chr7_2:43577939-43577958 | Msa1058600:CDS | 40.0% | |
| TTCTGTGCGTTATTGTTGAG+GGG | - | chr7_2:43577940-43577959 | Msa1058600:CDS | 40.0% | |
| TTGAATACTTTCTGCACCAG+TGG | - | chr7_2:43578179-43578198 | Msa1058600:intron | 40.0% | |
| AGTACAGATGCAATGCTATG+AGG | - | chr7_2:43578229-43578248 | Msa1058600:intron | 40.0% | |
| TCTTTATGAACAGGATGTGC+TGG | - | chr7_2:43578292-43578311 | Msa1058600:intron | 40.0% | |
| !! | CTTTGGGGTTTGTTCCTTTA+CGG | + | chr7_2:43578343-43578362 | None:intergenic | 40.0% |
| AAACTGCTTACCTTCCTTTG+GGG | + | chr7_2:43578358-43578377 | None:intergenic | 40.0% | |
| TTATGACAGACTTCGTAAGG+AGG | + | chr7_2:43578423-43578442 | None:intergenic | 40.0% | |
| GTGTTATGACAGACTTCGTA+AGG | + | chr7_2:43578426-43578445 | None:intergenic | 40.0% | |
| GTAAGTAACAAGTGTGGTAG+TGG | + | chr7_2:43578453-43578472 | None:intergenic | 40.0% | |
| GCAACTGTAAGTAACAAGTG+TGG | + | chr7_2:43578459-43578478 | None:intergenic | 40.0% | |
| TGAACCCTTTGTTAATTGGC+TGG | - | chr7_2:43578519-43578538 | Msa1058600:intron | 40.0% | |
| TCCTCCAGCCAATTAACAAA+GGG | + | chr7_2:43578526-43578545 | None:intergenic | 40.0% | |
| AAGAGGAGGAATGAATGTAG+CGG | - | chr7_2:43578551-43578570 | Msa1058600:intron | 40.0% | |
| TCTCATGAATTTGATGTGCC+TGG | - | chr7_2:43578656-43578675 | Msa1058600:intron | 40.0% | |
| ! | ATGCATTTTGTGGCTGTACA+AGG | - | chr7_2:43578906-43578925 | Msa1058600:intron | 40.0% |
| ! | TGCATTTTGTGGCTGTACAA+GGG | - | chr7_2:43578907-43578926 | Msa1058600:intron | 40.0% |
| TAGAGAGAGAGAGAGAGAGA+TGG | + | chr7_2:43574190-43574209 | None:intergenic | 45.0% | |
| ! | TACTCGGTGATGATTGTTGG+GGG | + | chr7_2:43574224-43574243 | None:intergenic | 45.0% |
| ! | CTACTCGGTGATGATTGTTG+GGG | + | chr7_2:43574225-43574244 | None:intergenic | 45.0% |
| ! | CTCTACTCGGTGATGATTGT+TGG | + | chr7_2:43574227-43574246 | None:intergenic | 45.0% |
| GAATTGGGATCGAAAGATCG+GGG | + | chr7_2:43574253-43574272 | None:intergenic | 45.0% | |
| CGAATTGGGATCGAAAGATC+GGG | + | chr7_2:43574254-43574273 | None:intergenic | 45.0% | |
| CTTTCGATCCCAATTCGTCT+TGG | - | chr7_2:43574257-43574276 | Msa1058600:three_prime_UTR | 45.0% | |
| ! | TGAACGAAAGGGGGCAATTT+TGG | + | chr7_2:43574501-43574520 | None:intergenic | 45.0% |
| ATTGCCCCCTTTCGTTCATT+AGG | - | chr7_2:43574503-43574522 | Msa1058600:three_prime_UTR | 45.0% | |
| TTGTGTTTCTTGCAGCTCCA+AGG | - | chr7_2:43574746-43574765 | Msa1058600:intron | 45.0% | |
| GAACAGTCAATGGAGGACAA+TGG | + | chr7_2:43574802-43574821 | None:intergenic | 45.0% | |
| TGCAGTGGTCCAGATTTACT+TGG | - | chr7_2:43575297-43575316 | Msa1058600:intron | 45.0% | |
| CACCGTATCTTGAGAAGTTG+AGG | + | chr7_2:43575485-43575504 | None:intergenic | 45.0% | |
| !! | AGGTTATAGAAGTGCCTAGC+AGG | + | chr7_2:43575774-43575793 | None:intergenic | 45.0% |
| ! | TACAGAAGGTTTTGCGGAGA+AGG | - | chr7_2:43576253-43576272 | Msa1058600:intron | 45.0% |
| GCTTTCTCTCAGAAGCTATC+TGG | - | chr7_2:43576381-43576400 | Msa1058600:intron | 45.0% | |
| !!! | TCGTTGGTTCTTTTTGCAGG+GGG | + | chr7_2:43576582-43576601 | None:intergenic | 45.0% |
| !!! | CTCGTTGGTTCTTTTTGCAG+GGG | + | chr7_2:43576583-43576602 | None:intergenic | 45.0% |
| !!! | GACTCGTTGGTTCTTTTTGC+AGG | + | chr7_2:43576585-43576604 | None:intergenic | 45.0% |
| ATGCTCAGAGAAAGACTCGT+TGG | + | chr7_2:43576598-43576617 | None:intergenic | 45.0% | |
| ATTCTCACCTGCCAGTGAAA+AGG | - | chr7_2:43576626-43576645 | Msa1058600:CDS | 45.0% | |
| ! | GGGGGAAATGGTTCTATTCA+AGG | + | chr7_2:43576938-43576957 | None:intergenic | 45.0% |
| !! | TGAGCATTGGCAGAAAAGAG+GGG | + | chr7_2:43576958-43576977 | None:intergenic | 45.0% |
| !! | CTTGAGCATTGGCAGAAAAG+AGG | + | chr7_2:43576960-43576979 | None:intergenic | 45.0% |
| TTCTGCCAATGCTCAAGAAG+CGG | - | chr7_2:43576963-43576982 | Msa1058600:CDS | 45.0% | |
| CCATAAGATCCGCACAATCT+CGG | + | chr7_2:43577662-43577681 | None:intergenic | 45.0% | |
| CGAGATTGTGCGGATCTTAT+GGG | - | chr7_2:43577660-43577679 | Msa1058600:intron | 45.0% | |
| GGGCTTAGCTTAGCATGTTA+TGG | - | chr7_2:43577960-43577979 | Msa1058600:intron | 45.0% | |
| GCTTAGCATGTTATGGTGTG+TGG | - | chr7_2:43577967-43577986 | Msa1058600:intron | 45.0% | |
| CGTAAAGGAACAAACCCCAA+AGG | - | chr7_2:43578341-43578360 | Msa1058600:intron | 45.0% | |
| AAGGAACAAACCCCAAAGGA+AGG | - | chr7_2:43578345-43578364 | Msa1058600:intron | 45.0% | |
| !! | TAACAAGTGTGGTAGTGGCA+AGG | + | chr7_2:43578448-43578467 | None:intergenic | 45.0% |
| GTACAGGCAAACCTTTGTGA+AGG | - | chr7_2:43578492-43578511 | Msa1058600:intron | 45.0% | |
| ACCCTTTGTTAATTGGCTGG+AGG | - | chr7_2:43578522-43578541 | Msa1058600:intron | 45.0% | |
| CTCCTCCAGCCAATTAACAA+AGG | + | chr7_2:43578527-43578546 | None:intergenic | 45.0% | |
| CTTTGTTAATTGGCTGGAGG+AGG | - | chr7_2:43578525-43578544 | Msa1058600:intron | 45.0% | |
| TGGAAAACATGCAAGCACCA+CGG | + | chr7_2:43578740-43578759 | None:intergenic | 45.0% | |
| !! | AAATATATTTCATTAAAATT+AGG | + | chr7_2:43576818-43576837 | None:intergenic | 5.0% |
| !!! | TAATTTTAATGAAATATATT+TGG | - | chr7_2:43576817-43576836 | Msa1058600:CDS | 5.0% |
| !!! | AATTTTAATGAAATATATTT+GGG | - | chr7_2:43576818-43576837 | Msa1058600:CDS | 5.0% |
| AAGATCGGGGAGTCTCTACT+CGG | + | chr7_2:43574240-43574259 | None:intergenic | 50.0% | |
| TCCAAGGAGAAACCCACTCT+CGG | - | chr7_2:43574762-43574781 | Msa1058600:intron | 50.0% | |
| TCTTAATCACCAGTGGCACG+CGG | - | chr7_2:43575218-43575237 | Msa1058600:intron | 50.0% | |
| CTGCATCAGCAAATGCTGCA+GGG | + | chr7_2:43575282-43575301 | None:intergenic | 50.0% | |
| ACTGCATCAGCAAATGCTGC+AGG | + | chr7_2:43575283-43575302 | None:intergenic | 50.0% | |
| ! | TGCAGCATTTGCTGATGCAG+TGG | - | chr7_2:43575282-43575301 | Msa1058600:intron | 50.0% |
| CACCTGTTATAGCACCTGCT+AGG | - | chr7_2:43575757-43575776 | Msa1058600:intron | 50.0% | |
| ! | TGCCTAGCAGGTGCTATAAC+AGG | + | chr7_2:43575762-43575781 | None:intergenic | 50.0% |
| TGGTAGTTCCAGGTTGTGTG+CGG | + | chr7_2:43576149-43576168 | None:intergenic | 50.0% | |
| CAAAAAGCTCCAAGGACTGG+AGG | + | chr7_2:43576320-43576339 | None:intergenic | 50.0% | |
| CCTCAAAAAGCTCCAAGGAC+TGG | + | chr7_2:43576323-43576342 | None:intergenic | 50.0% | |
| ! | CCAGTCCTTGGAGCTTTTTG+AGG | - | chr7_2:43576320-43576339 | Msa1058600:intron | 50.0% |
| AGTGGTTGGAACACAGTCTC+CGG | + | chr7_2:43576414-43576433 | None:intergenic | 50.0% | |
| !!! | CGTTGGTTCTTTTTGCAGGG+GGG | + | chr7_2:43576581-43576600 | None:intergenic | 50.0% |
| ! | GATGCATCCTTTTCACTGGC+AGG | + | chr7_2:43576636-43576655 | None:intergenic | 50.0% |
| !! | AGCATTGGCAGAAAAGAGGG+GGG | + | chr7_2:43576956-43576975 | None:intergenic | 50.0% |
| !! | GAGCATTGGCAGAAAAGAGG+GGG | + | chr7_2:43576957-43576976 | None:intergenic | 50.0% |
| CAGTTCCGCTTCTTGAGCAT+TGG | + | chr7_2:43576971-43576990 | None:intergenic | 50.0% | |
| GGACACAATGGTTAGCGTGA+TGG | + | chr7_2:43577229-43577248 | None:intergenic | 50.0% | |
| GGATACAGTGCTTAGCGTGA+TGG | + | chr7_2:43577380-43577399 | None:intergenic | 50.0% | |
| TGCCTGAAACCGAGATTGTG+CGG | - | chr7_2:43577650-43577669 | Msa1058600:intron | 50.0% | |
| ATCCGCACAATCTCGGTTTC+AGG | + | chr7_2:43577655-43577674 | None:intergenic | 50.0% | |
| CCGAGATTGTGCGGATCTTA+TGG | - | chr7_2:43577659-43577678 | Msa1058600:intron | 50.0% | |
| ATGGATGCTGTTCAGTGGTC+AGG | - | chr7_2:43577691-43577710 | Msa1058600:CDS | 50.0% | |
| TGGATGCTGTTCAGTGGTCA+GGG | - | chr7_2:43577692-43577711 | Msa1058600:CDS | 50.0% | |
| CACCAGTGGAAAACTTGAGC+TGG | - | chr7_2:43578193-43578212 | Msa1058600:intron | 50.0% | |
| ! | CTCCAGCTCAAGTTTTCCAC+TGG | + | chr7_2:43578198-43578217 | None:intergenic | 50.0% |
| GGGTTCAAGTGCCTTCACAA+AGG | + | chr7_2:43578506-43578525 | None:intergenic | 50.0% | |
| AGGAGGAATGAATGTAGCGG+AGG | - | chr7_2:43578554-43578573 | Msa1058600:intron | 50.0% | |
| CCAAGGAGAAACCCACTCTC+GGG | - | chr7_2:43574763-43574782 | Msa1058600:intron | 55.0% | |
| ! | CGCGGATTAAGACCCGCAAA+CGG | - | chr7_2:43575236-43575255 | Msa1058600:intron | 55.0% |
| CTTCAGATCCCCTGGGAGAA+TGG | + | chr7_2:43575830-43575849 | None:intergenic | 55.0% | |
| !! | AGACTGGCTTCAGATCCCCT+GGG | + | chr7_2:43575837-43575856 | None:intergenic | 55.0% |
| ! | TCATCGGGCTTGGTAGTTCC+AGG | + | chr7_2:43576159-43576178 | None:intergenic | 55.0% |
| TGGAACTACCAAGCCCGATG+AGG | - | chr7_2:43576158-43576177 | Msa1058600:intron | 55.0% | |
| GGAACTACCAAGCCCGATGA+GGG | - | chr7_2:43576159-43576178 | Msa1058600:intron | 55.0% | |
| GAACTACCAAGCCCGATGAG+GGG | - | chr7_2:43576160-43576179 | Msa1058600:intron | 55.0% | |
| AACTACCAAGCCCGATGAGG+GGG | - | chr7_2:43576161-43576180 | Msa1058600:intron | 55.0% | |
| GCGAAGATTCCTCCAGTCCT+TGG | - | chr7_2:43576308-43576327 | Msa1058600:intron | 55.0% | |
| GAAGCTATCTGGTCTCCCAC+CGG | - | chr7_2:43576392-43576411 | Msa1058600:intron | 55.0% | |
| GTTGGAACACAGTCTCCGGT+GGG | + | chr7_2:43576410-43576429 | None:intergenic | 55.0% | |
| GAACTAGCCCTTTGGCCACA+AGG | + | chr7_2:43576449-43576468 | None:intergenic | 55.0% | |
| GGCAGAAAAGAGGGGGGAAA+TGG | + | chr7_2:43576950-43576969 | None:intergenic | 55.0% | |
| GCAAGCACCACGGTACATGA+GGG | + | chr7_2:43578730-43578749 | None:intergenic | 55.0% | |
| TGCAAGCACCACGGTACATG+AGG | + | chr7_2:43578731-43578750 | None:intergenic | 55.0% | |
| ! | CCCGAGAGTGGGTTTCTCCT+TGG | + | chr7_2:43574766-43574785 | None:intergenic | 60.0% |
| GGTCTTAATCCGCGTGCCAC+TGG | + | chr7_2:43575230-43575249 | None:intergenic | 60.0% | |
| GACCCGCAAACGGAACATCG+CGG | - | chr7_2:43575246-43575265 | Msa1058600:intron | 60.0% | |
| GCAAATGCTGCAGGGTCCAG+AGG | + | chr7_2:43575274-43575293 | None:intergenic | 60.0% | |
| !! | GAGACTGGCTTCAGATCCCC+TGG | + | chr7_2:43575838-43575857 | None:intergenic | 60.0% |
| AGGATGGCGTTCCCCCTCAT+CGG | + | chr7_2:43576175-43576194 | None:intergenic | 60.0% | |
| GGTTGGAACACAGTCTCCGG+TGG | + | chr7_2:43576411-43576430 | None:intergenic | 60.0% | |
| CGAAGGACTGACCGCCTTAG+TGG | - | chr7_2:43577495-43577514 | Msa1058600:intron | 60.0% | |
| TGCAAATGCAGCCCTGCGCA+AGG | - | chr7_2:43577732-43577751 | Msa1058600:CDS | 60.0% | |
| TTGGCTGGAGGAGGCTGAAG+AGG | - | chr7_2:43578534-43578553 | Msa1058600:intron | 60.0% | |
| CACCACGGTACATGAGGGCA+CGG | + | chr7_2:43578725-43578744 | None:intergenic | 60.0% | |
| CGCCGCGATGTTCCGTTTGC+GGG | + | chr7_2:43575251-43575270 | None:intergenic | 65.0% | |
| GCGCCGCGATGTTCCGTTTG+CGG | + | chr7_2:43575252-43575271 | None:intergenic | 65.0% | |
| GGATGGCGTTCCCCCTCATC+GGG | + | chr7_2:43576174-43576193 | None:intergenic | 65.0% | |
| GCTGGAGGAGGCTGAAGAGG+AGG | - | chr7_2:43578537-43578556 | Msa1058600:intron | 65.0% | |
| ! | CACGGTACATGAGGGCACGG+CGG | + | chr7_2:43578722-43578741 | None:intergenic | 65.0% |
| ACGGAACATCGCGGCGCCTC+TGG | - | chr7_2:43575255-43575274 | Msa1058600:intron | 70.0% | |
| ACTGGGGGCCGCACACAACC+TGG | - | chr7_2:43576138-43576157 | Msa1058600:intron | 70.0% | |
| GCGTTCCCCCTCATCGGGCT+TGG | + | chr7_2:43576169-43576188 | None:intergenic | 70.0% | |
| CGCCGTGCCCTCATGTACCG+TGG | - | chr7_2:43578720-43578739 | Msa1058600:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 43574138 | 43579068 | 43574138 | ID=Msa1058600;Name=Msa1058600 |
| chr7_2 | mRNA | 43574138 | 43579068 | 43574138 | ID=Msa1058600-mRNA-1;Parent=Msa1058600;Name=Msa1058600-mRNA-1;_AED=0.00;_eAED=0.00;_QI=145|1|1|1|0.85|1|8|504|411 |
| chr7_2 | exon | 43574138 | 43574708 | 43574138 | ID=Msa1058600-mRNA-1:exon:7829;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43574840 | 43575048 | 43574840 | ID=Msa1058600-mRNA-1:exon:7828;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43575453 | 43575714 | 43575453 | ID=Msa1058600-mRNA-1:exon:7827;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43576584 | 43577077 | 43576584 | ID=Msa1058600-mRNA-1:exon:7826;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43577688 | 43577756 | 43577688 | ID=Msa1058600-mRNA-1:exon:7825;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43577870 | 43577975 | 43577870 | ID=Msa1058600-mRNA-1:exon:7824;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43578422 | 43578445 | 43578422 | ID=Msa1058600-mRNA-1:exon:7823;Parent=Msa1058600-mRNA-1 |
| chr7_2 | exon | 43578919 | 43579068 | 43578919 | ID=Msa1058600-mRNA-1:exon:7822;Parent=Msa1058600-mRNA-1 |
| chr7_2 | five_prime_UTR | 43578924 | 43579068 | 43578924 | ID=Msa1058600-mRNA-1:five_prime_utr;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43578919 | 43578923 | 43578919 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43578422 | 43578445 | 43578422 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43577870 | 43577975 | 43577870 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43577688 | 43577756 | 43577688 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43576584 | 43577077 | 43576584 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43575453 | 43575714 | 43575453 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43574840 | 43575048 | 43574840 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | CDS | 43574642 | 43574708 | 43574642 | ID=Msa1058600-mRNA-1:cds;Parent=Msa1058600-mRNA-1 |
| chr7_2 | three_prime_UTR | 43574138 | 43574641 | 43574138 | ID=Msa1058600-mRNA-1:three_prime_utr;Parent=Msa1058600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
