Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061120 | XP_013448863.1 | 97.609 | 460 | 11 | 0 | 1 | 460 | 1 | 460 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061120 | sp|Q9LZM1|ORP3A_ARATH | 77.440 | 461 | 94 | 3 | 1 | 459 | 1 | 453 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061120 | A0A072UAQ5 | 97.609 | 460 | 11 | 0 | 1 | 460 | 1 | 460 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1061120 | Msa1323870 | 0.859660 | 3.546925e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061120 | MtrunA17_Chr7g0238731 | 97.609 | 460 | 11 | 0 | 1 | 460 | 1 | 460 | 0.0 | 939 |
| Msa1061120 | MtrunA17_Chr4g0031691 | 74.664 | 446 | 110 | 2 | 18 | 460 | 12 | 457 | 0.0 | 728 |
| Msa1061120 | MtrunA17_Chr3g0115081 | 35.185 | 378 | 219 | 13 | 73 | 439 | 403 | 765 | 2.42e-52 | 188 |
| Msa1061120 | MtrunA17_Chr3g0131011 | 35.326 | 368 | 214 | 12 | 73 | 431 | 383 | 735 | 1.77e-50 | 182 |
| Msa1061120 | MtrunA17_Chr5g0424281 | 34.037 | 379 | 222 | 13 | 73 | 439 | 397 | 759 | 5.71e-48 | 176 |
| Msa1061120 | MtrunA17_Chr4g0056441 | 33.600 | 375 | 227 | 10 | 73 | 439 | 391 | 751 | 9.24e-47 | 172 |
| Msa1061120 | MtrunA17_Chr3g0123351 | 33.696 | 368 | 217 | 12 | 75 | 431 | 437 | 788 | 1.18e-45 | 169 |
| Msa1061120 | MtrunA17_Chr4g0071891 | 26.190 | 336 | 201 | 12 | 92 | 408 | 8 | 315 | 1.80e-16 | 80.5 |
| Msa1061120 | MtrunA17_Chr2g0298561 | 26.923 | 338 | 211 | 13 | 83 | 408 | 46 | 359 | 2.31e-15 | 77.4 |
| Msa1061120 | MtrunA17_Chr2g0298571 | 25.882 | 340 | 205 | 14 | 83 | 404 | 47 | 357 | 1.75e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061120 | AT5G02100.1 | 77.440 | 461 | 94 | 3 | 1 | 459 | 1 | 453 | 0.0 | 759 |
| Msa1061120 | AT3G09300.1 | 77.124 | 459 | 100 | 3 | 1 | 457 | 1 | 456 | 0.0 | 754 |
| Msa1061120 | AT5G59420.1 | 77.852 | 447 | 95 | 2 | 18 | 460 | 11 | 457 | 0.0 | 743 |
| Msa1061120 | AT5G02100.3 | 80.336 | 417 | 81 | 1 | 43 | 459 | 11 | 426 | 0.0 | 723 |
| Msa1061120 | AT5G02100.2 | 79.817 | 327 | 57 | 2 | 1 | 325 | 1 | 320 | 0.0 | 559 |
| Msa1061120 | AT4G12460.3 | 33.422 | 374 | 224 | 11 | 73 | 439 | 135 | 490 | 1.29e-52 | 185 |
| Msa1061120 | AT4G12460.4 | 33.422 | 374 | 224 | 11 | 73 | 439 | 135 | 490 | 1.29e-52 | 185 |
| Msa1061120 | AT4G12460.9 | 33.422 | 374 | 224 | 11 | 73 | 439 | 135 | 490 | 1.29e-52 | 185 |
| Msa1061120 | AT4G12460.7 | 33.422 | 374 | 224 | 11 | 73 | 439 | 324 | 679 | 2.83e-51 | 184 |
| Msa1061120 | AT4G12460.8 | 33.422 | 374 | 224 | 11 | 73 | 439 | 323 | 678 | 3.35e-51 | 184 |
| Msa1061120 | AT4G12460.1 | 33.422 | 374 | 224 | 11 | 73 | 439 | 323 | 678 | 3.35e-51 | 184 |
| Msa1061120 | AT4G12460.2 | 33.062 | 369 | 222 | 11 | 77 | 439 | 1 | 350 | 5.06e-51 | 177 |
| Msa1061120 | AT1G13170.1 | 35.389 | 373 | 212 | 13 | 75 | 435 | 435 | 790 | 5.03e-50 | 182 |
| Msa1061120 | AT4G22540.2 | 32.361 | 377 | 231 | 11 | 73 | 439 | 133 | 495 | 2.09e-49 | 176 |
| Msa1061120 | AT4G22540.3 | 32.361 | 377 | 231 | 11 | 73 | 439 | 133 | 495 | 2.09e-49 | 176 |
| Msa1061120 | AT4G22540.6 | 32.361 | 377 | 231 | 11 | 73 | 439 | 133 | 495 | 2.09e-49 | 176 |
| Msa1061120 | AT4G22540.4 | 32.361 | 377 | 231 | 11 | 73 | 439 | 133 | 495 | 2.09e-49 | 176 |
| Msa1061120 | AT4G08180.2 | 34.115 | 384 | 223 | 14 | 69 | 439 | 432 | 798 | 3.69e-49 | 180 |
| Msa1061120 | AT4G08180.1 | 34.115 | 384 | 223 | 14 | 69 | 439 | 433 | 799 | 3.86e-49 | 180 |
| Msa1061120 | AT4G08180.4 | 34.115 | 384 | 223 | 14 | 69 | 439 | 433 | 799 | 3.86e-49 | 180 |
| Msa1061120 | AT2G31030.1 | 34.031 | 382 | 219 | 15 | 69 | 439 | 122 | 481 | 1.04e-48 | 174 |
| Msa1061120 | AT4G08180.3 | 34.115 | 384 | 223 | 14 | 69 | 439 | 432 | 798 | 3.97e-48 | 177 |
| Msa1061120 | AT4G22540.5 | 32.368 | 380 | 227 | 12 | 73 | 439 | 344 | 706 | 4.12e-48 | 176 |
| Msa1061120 | AT4G22540.1 | 32.368 | 380 | 227 | 12 | 73 | 439 | 344 | 706 | 4.12e-48 | 176 |
| Msa1061120 | AT2G31020.1 | 34.474 | 380 | 220 | 15 | 69 | 439 | 407 | 766 | 5.50e-48 | 176 |
| Msa1061120 | AT1G13170.2 | 33.503 | 394 | 212 | 13 | 75 | 435 | 435 | 811 | 6.26e-47 | 174 |
| Msa1061120 | AT4G12460.5 | 31.560 | 282 | 174 | 9 | 73 | 345 | 323 | 594 | 3.38e-33 | 132 |
| Msa1061120 | AT4G12460.6 | 31.560 | 282 | 174 | 9 | 73 | 345 | 324 | 595 | 3.50e-33 | 132 |
| Msa1061120 | AT5G57240.4 | 24.576 | 354 | 225 | 14 | 83 | 407 | 40 | 380 | 4.80e-16 | 80.1 |
| Msa1061120 | AT5G57240.3 | 24.576 | 354 | 225 | 14 | 83 | 407 | 40 | 380 | 4.80e-16 | 80.1 |
| Msa1061120 | AT5G57240.2 | 23.988 | 346 | 212 | 13 | 83 | 407 | 40 | 355 | 1.00e-14 | 75.9 |
| Msa1061120 | AT5G57240.5 | 23.988 | 346 | 212 | 13 | 83 | 407 | 40 | 355 | 1.00e-14 | 75.9 |
| Msa1061120 | AT5G57240.1 | 23.988 | 346 | 212 | 13 | 83 | 407 | 40 | 355 | 1.00e-14 | 75.9 |
| Msa1061120 | AT4G25850.1 | 24.633 | 341 | 220 | 11 | 83 | 409 | 45 | 362 | 3.71e-12 | 68.2 |
| Msa1061120 | AT4G25850.3 | 35.915 | 142 | 82 | 5 | 83 | 218 | 45 | 183 | 4.79e-12 | 66.6 |
| Msa1061120 | AT4G25850.2 | 35.211 | 142 | 83 | 5 | 83 | 218 | 147 | 285 | 5.24e-12 | 68.2 |
| Msa1061120 | AT4G25860.1 | 32.468 | 154 | 95 | 5 | 83 | 230 | 46 | 196 | 6.87e-12 | 67.4 |
| Msa1061120 | AT4G25860.2 | 32.468 | 154 | 95 | 5 | 83 | 230 | 40 | 190 | 8.29e-12 | 67.0 |
Find 134 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGGCAATTTGATAATT+TGG | 0.085476 | 7_2:+50138793 | Msa1061120:CDS |
| GCTTCAACTTTCTCCAATTT+TGG | 0.123553 | 7_2:+50133637 | Msa1061120:CDS |
| GCATCTTCAGTTCCTCCTTC+TGG | 0.209164 | 7_2:-50134371 | None:intergenic |
| AGCCGAGTTGCCAAGAAATT+TGG | 0.211425 | 7_2:-50136193 | None:intergenic |
| TGAAATTTGATCTTGTTTCT+TGG | 0.217996 | 7_2:+50138908 | Msa1061120:three_prime_UTR |
| TTGAATTCTGGTCTACTTTC+AGG | 0.223797 | 7_2:-50138770 | None:intergenic |
| CTGTATATTTACCGTTATAT+TGG | 0.237011 | 7_2:-50138706 | None:intergenic |
| GAATTTGGATCTAAAGTTTA+AGG | 0.242044 | 7_2:-50133481 | None:intergenic |
| CCTGGAAGTGGTTCTCCTTC+AGG | 0.245926 | 7_2:-50137338 | None:intergenic |
| GAAATTTGATCTTGTTTCTT+GGG | 0.259933 | 7_2:+50138909 | Msa1061120:three_prime_UTR |
| TCTGTTTCTAAATCCGTTAC+TGG | 0.261884 | 7_2:+50133664 | Msa1061120:CDS |
| AGAAACAGAAGTGCCAAAAT+TGG | 0.272406 | 7_2:-50133650 | None:intergenic |
| TACCATTTATCCATGCAAAA+TGG | 0.282943 | 7_2:-50138989 | None:intergenic |
| AAAGTGAAAACCAAATTTCT+TGG | 0.290605 | 7_2:+50136183 | Msa1061120:CDS |
| CTAGAAGCAGTAGTTTGTTT+AGG | 0.290686 | 7_2:-50133583 | None:intergenic |
| AAATTCTAATAACTGGAAAA+TGG | 0.294958 | 7_2:+50137285 | Msa1061120:CDS |
| TTTCAACCGTGTGGCTGGTT+TGG | 0.299374 | 7_2:+50136869 | Msa1061120:CDS |
| TTCAACCGTGTGGCTGGTTT+GGG | 0.306787 | 7_2:+50136870 | Msa1061120:CDS |
| AATTGCCAAGGATTGAATTC+TGG | 0.309835 | 7_2:-50138782 | None:intergenic |
| GTCTGATGGCAACAACTTCT+TGG | 0.311470 | 7_2:-50138369 | None:intergenic |
| TTCAACACCTTGGGGTGAAT+TGG | 0.318364 | 7_2:+50138676 | Msa1061120:CDS |
| AAACCATTCAATCCAATTCT+TGG | 0.319529 | 7_2:+50135839 | Msa1061120:CDS |
| TGGTTTCCATGTTCGTTGAT+AGG | 0.324794 | 7_2:-50135822 | None:intergenic |
| TGATAATTTGGAGGCTGAAT+AGG | 0.326474 | 7_2:+50138805 | Msa1061120:CDS |
| TGCTCAAGGGCCATTCTATC+AGG | 0.333635 | 7_2:-50138404 | None:intergenic |
| TGTTAAGCTTGTGCGCAAAA+TGG | 0.342311 | 7_2:-50138331 | None:intergenic |
| CCTGAAGGAGAACCACTTCC+AGG | 0.345218 | 7_2:+50137338 | Msa1061120:CDS |
| AGTTGCTGAAACTCCTAAAA+AGG | 0.350695 | 7_2:+50138292 | Msa1061120:CDS |
| ACCATCTAGGAGTGAACTTC+TGG | 0.351260 | 7_2:-50138631 | None:intergenic |
| TACAGGAACGGGATAGTTAC+TGG | 0.352770 | 7_2:+50135186 | Msa1061120:intron |
| TTACCTGCTCTTCTCGTTGC+CGG | 0.355589 | 7_2:-50138444 | None:intergenic |
| TCATAAGTCTCGCCAAGAAT+TGG | 0.364216 | 7_2:-50135851 | None:intergenic |
| TCTCATCCGCCATATCTAAT+AGG | 0.371242 | 7_2:-50135448 | None:intergenic |
| CTGGAAGTGGTTCTCCTTCA+GGG | 0.390296 | 7_2:-50137337 | None:intergenic |
| ATTCTTTGTAGCATCGTCAT+TGG | 0.391137 | 7_2:-50135278 | None:intergenic |
| ATAATAATAACAATAACTTT+AGG | 0.402575 | 7_2:-50133400 | None:intergenic |
| TCCATTGGTGCCATGGAAAT+CGG | 0.411063 | 7_2:-50133559 | None:intergenic |
| ACTTCTGGTTCTTCGCCTCT+CGG | 0.421507 | 7_2:-50138616 | None:intergenic |
| GAGAACAGCGAAGAAAAGTT+AGG | 0.422193 | 7_2:-50133340 | None:intergenic |
| AAATTTGATCTTGTTTCTTG+GGG | 0.422553 | 7_2:+50138910 | Msa1061120:three_prime_UTR |
| ACGAACTTGGATTGATTCAC+CGG | 0.427585 | 7_2:+50136796 | Msa1061120:CDS |
| ACCAGAAGTTCACTCCTAGA+TGG | 0.427680 | 7_2:+50138630 | Msa1061120:CDS |
| TCAGCATGCCCGGCACTCAT+TGG | 0.428818 | 7_2:-50136129 | None:intergenic |
| GGAAGTAACTTCAACACCTT+GGG | 0.430491 | 7_2:+50138667 | Msa1061120:CDS |
| TCGCCAAGAATTGGATTGAA+TGG | 0.437574 | 7_2:-50135842 | None:intergenic |
| TTGAGCTCAGTGCCTGGAAG+TGG | 0.441386 | 7_2:-50137350 | None:intergenic |
| TTTGAGAAACACGCGCTTAG+TGG | 0.441528 | 7_2:-50133233 | None:intergenic |
| CTTATATCTGAAAATAACTC+AGG | 0.443592 | 7_2:-50139128 | None:intergenic |
| AGATGGTGTGACGCTTGATT+TGG | 0.443745 | 7_2:+50136736 | Msa1061120:CDS |
| TGATAGAATGGCCCTTGAGC+AGG | 0.445077 | 7_2:+50138406 | Msa1061120:CDS |
| TCTTGGCGAGACTTATGAAA+TGG | 0.446172 | 7_2:+50135856 | Msa1061120:CDS |
| TGCTGAAGAGGAAGCTAAGA+AGG | 0.456916 | 7_2:+50134391 | Msa1061120:CDS |
| ACCTCTTTGAGCTCAGTGCC+TGG | 0.457360 | 7_2:-50137356 | None:intergenic |
| CTAAAGTTTAAGGATCCAAA+TGG | 0.458796 | 7_2:-50133471 | None:intergenic |
| GTACTCTTACCTATTAGATA+TGG | 0.460527 | 7_2:+50135439 | Msa1061120:CDS |
| AACCAAATTTCTTGGCAACT+CGG | 0.462206 | 7_2:+50136191 | Msa1061120:CDS |
| GTCCTGACAAATTTGACTAC+GGG | 0.464111 | 7_2:+50136827 | Msa1061120:CDS |
| ACCGATTTCCATGGCACCAA+TGG | 0.467780 | 7_2:+50133558 | Msa1061120:exon |
| TCTGATGGCAACAACTTCTT+GGG | 0.469985 | 7_2:-50138368 | None:intergenic |
| TTGGAAGTTTACCAATATAA+CGG | 0.476790 | 7_2:+50138695 | Msa1061120:CDS |
| CTTTGCTAATGTATATTGTA+CGG | 0.479718 | 7_2:+50139033 | Msa1061120:three_prime_UTR |
| CAGGGTGACCTATCCGTGTC+CGG | 0.480998 | 7_2:+50138425 | Msa1061120:CDS |
| GTTAAGCTTGTGCGCAAAAT+GGG | 0.484686 | 7_2:-50138330 | None:intergenic |
| TTGGCAATTTGATAATTTGG+AGG | 0.489898 | 7_2:+50138796 | Msa1061120:CDS |
| GTAGTTTGTTTAGGATCCAT+TGG | 0.490818 | 7_2:-50133574 | None:intergenic |
| TTTAGGATCCATTGGTGCCA+TGG | 0.491784 | 7_2:-50133566 | None:intergenic |
| CAACGAGACTACCTTCCAAC+AGG | 0.493456 | 7_2:-50136225 | None:intergenic |
| GCATGCCCGGCACTCATTGG+AGG | 0.493510 | 7_2:-50136126 | None:intergenic |
| TCGGCTGATTTATATCCTGT+TGG | 0.501055 | 7_2:+50136210 | Msa1061120:CDS |
| GCATATACAAGTCTCATGTA+TGG | 0.502072 | 7_2:-50135479 | None:intergenic |
| CATATCCATCCACTTCATAT+CGG | 0.502430 | 7_2:-50137238 | None:intergenic |
| GCTTCTAGTAGTAGTGGTGG+TGG | 0.508922 | 7_2:+50133598 | Msa1061120:CDS |
| TGTGCGCAAAATGGGTGTAT+TGG | 0.508928 | 7_2:-50138322 | None:intergenic |
| CATGTCATTTATAGCAGAGC+AGG | 0.509505 | 7_2:+50135892 | Msa1061120:CDS |
| CGAACTTGGATTGATTCACC+GGG | 0.510339 | 7_2:+50136797 | Msa1061120:CDS |
| CTGTTTCTAAATCCGTTACT+GGG | 0.511359 | 7_2:+50133665 | Msa1061120:CDS |
| ATCACCCTCCAATGAGTGCC+GGG | 0.517943 | 7_2:+50136121 | Msa1061120:CDS |
| CATCACCCTCCAATGAGTGC+CGG | 0.526096 | 7_2:+50136120 | Msa1061120:CDS |
| GCAAAGAATATAGCTCTAGT+TGG | 0.531468 | 7_2:-50139016 | None:intergenic |
| GTAGACCAGAATTCAATCCT+TGG | 0.532768 | 7_2:+50138777 | Msa1061120:CDS |
| TCGTCTTCGTCCTGATAGAA+TGG | 0.535385 | 7_2:+50138394 | Msa1061120:CDS |
| TCTCGTTGCCGGACACGGAT+AGG | 0.536153 | 7_2:-50138433 | None:intergenic |
| GGTCCTGACAAATTTGACTA+CGG | 0.538233 | 7_2:+50136826 | Msa1061120:CDS |
| TTTACAACTTCCAATCCCTC+AGG | 0.540317 | 7_2:-50134347 | None:intergenic |
| GCTCTTCTCGTTGCCGGACA+CGG | 0.540689 | 7_2:-50138438 | None:intergenic |
| TAAAGTTTAAGGATCCAAAT+GGG | 0.544971 | 7_2:-50133470 | None:intergenic |
| AGGAAGTAACTTCAACACCT+TGG | 0.547809 | 7_2:+50138666 | Msa1061120:CDS |
| CATGCCCGGCACTCATTGGA+GGG | 0.549295 | 7_2:-50136125 | None:intergenic |
| AATGACGATGCTACAAAGAA+TGG | 0.549944 | 7_2:+50135280 | Msa1061120:CDS |
| AGGAACTGAAGATGCTGAAG+AGG | 0.553903 | 7_2:+50134379 | Msa1061120:CDS |
| CTGATTTATATCCTGTTGGA+AGG | 0.554946 | 7_2:+50136214 | Msa1061120:CDS |
| TGTCCGGCAACGAGAAGAGC+AGG | 0.556678 | 7_2:+50138441 | Msa1061120:CDS |
| TCTGTCAGATCAAACCATCT+AGG | 0.561419 | 7_2:-50138644 | None:intergenic |
| TCCAAATTATCAAATTGCCA+AGG | 0.578229 | 7_2:-50138794 | None:intergenic |
| GATAGAATGGCCCTTGAGCA+GGG | 0.578871 | 7_2:+50138407 | Msa1061120:CDS |
| TTATATCTGAAAATAACTCA+GGG | 0.582795 | 7_2:-50139127 | None:intergenic |
| CGGATAGGTCACCCTGCTCA+AGG | 0.585127 | 7_2:-50138418 | None:intergenic |
| GCTGGCCGATATGAAGTGGA+TGG | 0.593394 | 7_2:+50137233 | Msa1061120:CDS |
| AATTTGATCTTGTTTCTTGG+GGG | 0.593464 | 7_2:+50138911 | Msa1061120:three_prime_UTR |
| TATCAAGTTTGTGACCCTGA+AGG | 0.595390 | 7_2:+50137323 | Msa1061120:CDS |
| TGGCTCTGATATCACATCAA+TGG | 0.599652 | 7_2:+50135229 | Msa1061120:CDS |
| ACTATGCCTATCAACGAACA+TGG | 0.602963 | 7_2:+50135816 | Msa1061120:CDS |
| CTCTTACCTATTAGATATGG+CGG | 0.604056 | 7_2:+50135442 | Msa1061120:CDS |
| AGGCTGAATAGGCATTCTTG+TGG | 0.605046 | 7_2:+50138816 | Msa1061120:exon |
| GGACGAAGACGAGAGTCTGA+TGG | 0.607644 | 7_2:-50138383 | None:intergenic |
| GGATAGGTCACCCTGCTCAA+GGG | 0.609499 | 7_2:-50138417 | None:intergenic |
| GATGCTACAAAGAATGGCCG+AGG | 0.612017 | 7_2:+50135286 | Msa1061120:CDS |
| ACTACTGCTTCTAGTAGTAG+TGG | 0.614539 | 7_2:+50133592 | Msa1061120:CDS |
| AAAATGATGCAAAAGTATGT+TGG | 0.618288 | 7_2:+50135209 | Msa1061120:CDS |
| CGTGTTACACTCAAAAGAGA+TGG | 0.622793 | 7_2:+50136719 | Msa1061120:CDS |
| TAAACTTCCAATTCACCCCA+AGG | 0.625431 | 7_2:-50138683 | None:intergenic |
| GCTGAAGAGGAAGCTAAGAA+GGG | 0.629950 | 7_2:+50134392 | Msa1061120:CDS |
| CAGAGCTGGCCGATATGAAG+TGG | 0.634968 | 7_2:+50137229 | Msa1061120:intron |
| TTGGAAGTTGTAAATCCAGA+AGG | 0.636875 | 7_2:+50134356 | Msa1061120:CDS |
| TTTGTCAGGACCATATCCCC+CGG | 0.638714 | 7_2:-50136815 | None:intergenic |
| TCCAGGCACTGAGCTCAAAG+AGG | 0.639649 | 7_2:+50137355 | Msa1061120:CDS |
| ATAAGAAACATACCCAGTAA+CGG | 0.644588 | 7_2:-50133677 | None:intergenic |
| AGGAAGCTAAGAAGGGACGA+TGG | 0.645802 | 7_2:+50134399 | Msa1061120:CDS |
| GAAGGGACGATGGAAAGATG+AGG | 0.648742 | 7_2:+50134409 | Msa1061120:CDS |
| GAAGTTGTAAATCCAGAAGG+AGG | 0.655707 | 7_2:+50134359 | Msa1061120:CDS |
| ACTGCTTCTAGTAGTAGTGG+TGG | 0.656420 | 7_2:+50133595 | Msa1061120:CDS |
| TCCTGACAAATTTGACTACG+GGG | 0.660297 | 7_2:+50136828 | Msa1061120:CDS |
| AACTTGGATTGATTCACCGG+GGG | 0.663951 | 7_2:+50136799 | Msa1061120:CDS |
| TATCTGAAAATAACTCAGGG+TGG | 0.680261 | 7_2:-50139124 | None:intergenic |
| TCATACCCAAACCAGCCACA+CGG | 0.689650 | 7_2:-50136875 | None:intergenic |
| CCTGACAAATTTGACTACGG+GGG | 0.691506 | 7_2:+50136829 | Msa1061120:CDS |
| TAGATGGTTTGATCTGACAG+AGG | 0.699389 | 7_2:+50138646 | Msa1061120:CDS |
| CTATAAATGACATGCCACCG+TGG | 0.712560 | 7_2:-50135883 | None:intergenic |
| AGCTGAGAAGAGAAACCGAG+AGG | 0.718676 | 7_2:+50138601 | Msa1061120:CDS |
| GAACTTGGATTGATTCACCG+GGG | 0.721206 | 7_2:+50136798 | Msa1061120:CDS |
| ACTTATGAAATGGCTAACCA+CGG | 0.724007 | 7_2:+50135866 | Msa1061120:CDS |
| GAAGTAACTTCAACACCTTG+GGG | 0.735829 | 7_2:+50138668 | Msa1061120:CDS |
| TATGAAATGGCTAACCACGG+TGG | 0.752131 | 7_2:+50135869 | Msa1061120:CDS |
| CAGAACTATCTACAGCAGCG+CGG | 0.791276 | 7_2:-50138733 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAACAATAACTTT+AGG | - | chr7_2:50133403-50133422 | None:intergenic | 10.0% |
| !!! | AAAAATTCTATTTTTTCAAT+TGG | + | chr7_2:50133511-50133530 | Msa1061120:five_prime_UTR | 10.0% |
| !!! | AAAATTCTATTTTTTCAATT+GGG | + | chr7_2:50133512-50133531 | Msa1061120:five_prime_UTR | 10.0% |
| !!! | TTATATTTTTTTTGTAATGT+TGG | + | chr7_2:50136606-50136625 | Msa1061120:intron | 10.0% |
| !! | AAAATGATTACATTATATTA+GGG | - | chr7_2:50137112-50137131 | None:intergenic | 10.0% |
| !!! | ATGTAAATTGTATAATTTTA+AGG | + | chr7_2:50138169-50138188 | Msa1061120:intron | 10.0% |
| !!! | GAATTTTTTTTTGATGAATT+TGG | - | chr7_2:50133499-50133518 | None:intergenic | 15.0% |
| !!! | TTTTGCAATTTTTATTTTTG+TGG | + | chr7_2:50133743-50133762 | Msa1061120:intron | 15.0% |
| !!! | TTTGCAATTTTTATTTTTGT+GGG | + | chr7_2:50133744-50133763 | Msa1061120:intron | 15.0% |
| !! | TAATATTTGTGTTGTATTTA+TGG | + | chr7_2:50134588-50134607 | Msa1061120:intron | 15.0% |
| !! | TATTATAGAGACAAAAAAAT+TGG | + | chr7_2:50134722-50134741 | Msa1061120:intron | 15.0% |
| !! | AGTTAAGATTATTATATGAA+AGG | - | chr7_2:50136339-50136358 | None:intergenic | 15.0% |
| !!! | ATTTTAAACTGTGTATTATA+TGG | + | chr7_2:50136537-50136556 | Msa1061120:intron | 15.0% |
| !! | TTAAATTGAAGTAAAACATA+AGG | - | chr7_2:50136574-50136593 | None:intergenic | 15.0% |
| !!! | ATGTTTTACTTCAATTTAAT+CGG | + | chr7_2:50136575-50136594 | Msa1061120:intron | 15.0% |
| !! | CAAAATGATTACATTATATT+AGG | - | chr7_2:50137113-50137132 | None:intergenic | 15.0% |
| !!! | AAGAATTAATTGATTCAATT+TGG | - | chr7_2:50137660-50137679 | None:intergenic | 15.0% |
| !! | TTAGAATATATACTATACAA+AGG | + | chr7_2:50137732-50137751 | Msa1061120:intron | 15.0% |
| !! | TAGAATATATACTATACAAA+GGG | + | chr7_2:50137733-50137752 | Msa1061120:intron | 15.0% |
| !!! | TGTTTTTATCGTAAAAAAAA+TGG | + | chr7_2:50137840-50137859 | Msa1061120:intron | 15.0% |
| !! | AACTTATGAACAAATTATTT+GGG | - | chr7_2:50138050-50138069 | None:intergenic | 15.0% |
| !! | TAACTTATGAACAAATTATT+TGG | - | chr7_2:50138051-50138070 | None:intergenic | 15.0% |
| !! | AAAATGACAGTTAAAAAAAT+AGG | - | chr7_2:50138849-50138868 | None:intergenic | 15.0% |
| !!! | ATTGAACAAGTTTGAAATTA+TGG | - | chr7_2:50133707-50133726 | None:intergenic | 20.0% |
| !! | GATTATCATCTTTCAAAATT+GGG | + | chr7_2:50133815-50133834 | Msa1061120:intron | 20.0% |
| !!! | TTTTAGTGTTATTAATACTC+TGG | + | chr7_2:50133873-50133892 | Msa1061120:intron | 20.0% |
| !!! | TTTTGATGTTTAAGTATTAG+TGG | + | chr7_2:50134222-50134241 | Msa1061120:intron | 20.0% |
| !! | GAAATAATGCATTGTAATTA+TGG | - | chr7_2:50135133-50135152 | None:intergenic | 20.0% |
| !! | ATATATCACTTCAAAAATAG+CGG | + | chr7_2:50135600-50135619 | Msa1061120:intron | 20.0% |
| !!! | CATTTTCTTTAAAATAACTG+AGG | - | chr7_2:50135946-50135965 | None:intergenic | 20.0% |
| !! | TTATAAAAACAAATTGCTAC+AGG | + | chr7_2:50136092-50136111 | Msa1061120:intron | 20.0% |
| !! | TCAAAAGTAACAAAATGTAT+TGG | - | chr7_2:50136298-50136317 | None:intergenic | 20.0% |
| !!! | TTTCATCTGTTATTTAAGTT+TGG | + | chr7_2:50136462-50136481 | Msa1061120:intron | 20.0% |
| !!! | TTCATCTGTTATTTAAGTTT+GGG | + | chr7_2:50136463-50136482 | Msa1061120:intron | 20.0% |
| !! | AAAAAAAGATTAATTGCCAA+TGG | + | chr7_2:50136514-50136533 | Msa1061120:intron | 20.0% |
| !!! | AAAATTAGCAACTTGATTTT+TGG | + | chr7_2:50136773-50136792 | Msa1061120:CDS | 20.0% |
| !!! | TTTCCAGTTATTAGAATTTT+TGG | - | chr7_2:50137284-50137303 | None:intergenic | 20.0% |
| !! | AAATTCTAATAACTGGAAAA+TGG | + | chr7_2:50137285-50137304 | Msa1061120:CDS | 20.0% |
| !!! | TAGCTTTGGAATTAAATTTT+AGG | + | chr7_2:50137516-50137535 | Msa1061120:intron | 20.0% |
| !! | TTAAATTGGGATTATATAAC+AGG | + | chr7_2:50137593-50137612 | Msa1061120:intron | 20.0% |
| !!! | ACTAAACCTGTTATATTTTT+TGG | - | chr7_2:50137629-50137648 | None:intergenic | 20.0% |
| !! | TTTGTTTGAATTCTTAGTTA+TGG | + | chr7_2:50137706-50137725 | Msa1061120:intron | 20.0% |
| !!! | CTTAAACTTATTTTTCAGTT+TGG | + | chr7_2:50138565-50138584 | Msa1061120:intron | 20.0% |
| ! | AGACGTTAGAAAAATCAAAA+GGG | - | chr7_2:50133265-50133284 | None:intergenic | 25.0% |
| ! | AAGACGTTAGAAAAATCAAA+AGG | - | chr7_2:50133266-50133285 | None:intergenic | 25.0% |
| ! | TAAAGTTTAAGGATCCAAAT+GGG | - | chr7_2:50133473-50133492 | None:intergenic | 25.0% |
| !! | GAATTTGGATCTAAAGTTTA+AGG | - | chr7_2:50133484-50133503 | None:intergenic | 25.0% |
| !! | ATTGGGTTTCTATTTTCATA+AGG | + | chr7_2:50133529-50133548 | Msa1061120:five_prime_UTR | 25.0% |
| ! | GGATTATCATCTTTCAAAAT+TGG | + | chr7_2:50133814-50133833 | Msa1061120:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr7_2:50133991-50134010 | None:intergenic | 25.0% |
| !!! | TTGGTATTTGAGTTATTTCT+TGG | + | chr7_2:50134254-50134273 | Msa1061120:intron | 25.0% |
| !!! | TTATTTCTTGGAGTTTTTGT+TGG | + | chr7_2:50134266-50134285 | Msa1061120:intron | 25.0% |
| ! | GTAAATTATGCTGATCAATA+AGG | + | chr7_2:50134643-50134662 | Msa1061120:intron | 25.0% |
| !!! | TCTATTTTTGTTGTTAGAGA+TGG | + | chr7_2:50134747-50134766 | Msa1061120:intron | 25.0% |
| !!! | CTATTTTTGTTGTTAGAGAT+GGG | + | chr7_2:50134748-50134767 | Msa1061120:intron | 25.0% |
| !! | TAAAACAGTTTTCTCAATTG+CGG | + | chr7_2:50134841-50134860 | Msa1061120:intron | 25.0% |
| ! | GAACACATTTATTTATCTCA+TGG | + | chr7_2:50135076-50135095 | Msa1061120:intron | 25.0% |
| !! | AAAATGATGCAAAAGTATGT+TGG | + | chr7_2:50135209-50135228 | Msa1061120:CDS | 25.0% |
| ! | TCTATATGTTAGAAACTCAT+TGG | + | chr7_2:50135389-50135408 | Msa1061120:intron | 25.0% |
| ! | CTATATGTTAGAAACTCATT+GGG | + | chr7_2:50135390-50135409 | Msa1061120:intron | 25.0% |
| ! | TGCTAAGTATTATCAAATTC+TGG | - | chr7_2:50135658-50135677 | None:intergenic | 25.0% |
| ! | AAAAAATAGATGACAAAGAG+AGG | - | chr7_2:50135991-50136010 | None:intergenic | 25.0% |
| !!! | TATTTTTTTTACAATGCCTC+TGG | + | chr7_2:50136003-50136022 | Msa1061120:intron | 25.0% |
| ! | AAAGTGAAAACCAAATTTCT+TGG | + | chr7_2:50136183-50136202 | Msa1061120:CDS | 25.0% |
| !! | TCATCTGTTATTTAAGTTTG+GGG | + | chr7_2:50136464-50136483 | Msa1061120:intron | 25.0% |
| !! | ATACACAGTTTAAAATCCAT+TGG | - | chr7_2:50136533-50136552 | None:intergenic | 25.0% |
| ! | AACTGTGTATTATATGGATA+AGG | + | chr7_2:50136543-50136562 | Msa1061120:intron | 25.0% |
| !!! | ATCAAGTTGCTAATTTTTGT+AGG | - | chr7_2:50136770-50136789 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGCGATAATTT+AGG | - | chr7_2:50136910-50136929 | None:intergenic | 25.0% |
| ! | ATGCATAAATAAGAAGTTAC+TGG | - | chr7_2:50137004-50137023 | None:intergenic | 25.0% |
| !!! | CATTTCTTTTAGTTTACTTG+TGG | + | chr7_2:50137026-50137045 | Msa1061120:intron | 25.0% |
| ! | TGAAACTAAAAGTTCACATA+TGG | - | chr7_2:50137167-50137186 | None:intergenic | 25.0% |
| ! | GAACCAAAAATTCTAATAAC+TGG | + | chr7_2:50137278-50137297 | Msa1061120:CDS | 25.0% |
| ! | AATTTAATTCCAAAGCTATC+AGG | - | chr7_2:50137514-50137533 | None:intergenic | 25.0% |
| ! | GTGTAACCAAAAAATATAAC+AGG | + | chr7_2:50137620-50137639 | Msa1061120:intron | 25.0% |
| !! | TAATTGATTCAATTTGGCTA+CGG | - | chr7_2:50137654-50137673 | None:intergenic | 25.0% |
| !! | ATCAAGTTAAATTTGACTTC+AGG | - | chr7_2:50137683-50137702 | None:intergenic | 25.0% |
| ! | ATTAAGATGTTAATCCAAAC+AGG | - | chr7_2:50137759-50137778 | None:intergenic | 25.0% |
| ! | CATCTTAATTAAGCACTTAT+AGG | + | chr7_2:50137770-50137789 | Msa1061120:intron | 25.0% |
| ! | TATTTAAGTGTAAGCTGTTT+CGG | + | chr7_2:50137813-50137832 | Msa1061120:intron | 25.0% |
| ! | AACTGTTTCATATGAACAAT+AGG | + | chr7_2:50137899-50137918 | Msa1061120:intron | 25.0% |
| !! | TATTGGAATTTGTCCTTTTT+AGG | - | chr7_2:50138308-50138327 | None:intergenic | 25.0% |
| !!! | AAACTTATTTTTCAGTTTGG+AGG | + | chr7_2:50138568-50138587 | Msa1061120:intron | 25.0% |
| ! | TTGGAAGTTTACCAATATAA+CGG | + | chr7_2:50138695-50138714 | Msa1061120:CDS | 25.0% |
| ! | CTGTATATTTACCGTTATAT+TGG | - | chr7_2:50138709-50138728 | None:intergenic | 25.0% |
| !! | TGAAATTTGATCTTGTTTCT+TGG | + | chr7_2:50138908-50138927 | Msa1061120:three_prime_UTR | 25.0% |
| !! | GAAATTTGATCTTGTTTCTT+GGG | + | chr7_2:50138909-50138928 | Msa1061120:three_prime_UTR | 25.0% |
| !! | AAATTTGATCTTGTTTCTTG+GGG | + | chr7_2:50138910-50138929 | Msa1061120:three_prime_UTR | 25.0% |
| ! | CTTTGCTAATGTATATTGTA+CGG | + | chr7_2:50139033-50139052 | Msa1061120:three_prime_UTR | 25.0% |
| TTAGAAAAATCAAAAGGGGT+GGG | - | chr7_2:50133260-50133279 | None:intergenic | 30.0% | |
| GACGTTAGAAAAATCAAAAG+GGG | - | chr7_2:50133264-50133283 | None:intergenic | 30.0% | |
| !!! | GAAAAGTTAGGATTTTTGGT+TGG | - | chr7_2:50133331-50133350 | None:intergenic | 30.0% |
| ! | CGAAGAAAAGTTAGGATTTT+TGG | - | chr7_2:50133335-50133354 | None:intergenic | 30.0% |
| !!! | CGCATATTTTAATACCCATT+TGG | + | chr7_2:50133456-50133475 | Msa1061120:five_prime_UTR | 30.0% |
| CTAAAGTTTAAGGATCCAAA+TGG | - | chr7_2:50133474-50133493 | None:intergenic | 30.0% | |
| ATAAGAAACATACCCAGTAA+CGG | - | chr7_2:50133680-50133699 | None:intergenic | 30.0% | |
| TCGTATCAGTAAGTAAAGTA+TGG | + | chr7_2:50133931-50133950 | Msa1061120:intron | 30.0% | |
| !! | GTATTAGTGGATTTGTAGTT+TGG | + | chr7_2:50134235-50134254 | Msa1061120:intron | 30.0% |
| !!! | TTGATTTTTAGTACTCCTGA+GGG | + | chr7_2:50134332-50134351 | Msa1061120:intron | 30.0% |
| ATCAGCATAATTTACATGAG+TGG | - | chr7_2:50134638-50134657 | None:intergenic | 30.0% | |
| !! | ACCAAGTTTTGTCAAATTGT+GGG | - | chr7_2:50134928-50134947 | None:intergenic | 30.0% |
| !! | TACCAAGTTTTGTCAAATTG+TGG | - | chr7_2:50134929-50134948 | None:intergenic | 30.0% |
| CACATTTATTTATCTCATGG+TGG | + | chr7_2:50135079-50135098 | Msa1061120:intron | 30.0% | |
| ATGTACAAAAGAACACTTGA+GGG | - | chr7_2:50135166-50135185 | None:intergenic | 30.0% | |
| AATGTACAAAAGAACACTTG+AGG | - | chr7_2:50135167-50135186 | None:intergenic | 30.0% | |
| ! | AGTGTTCTTTTGTACATTAC+AGG | + | chr7_2:50135169-50135188 | Msa1061120:intron | 30.0% |
| ! | TCTTTTGTACATTACAGGAA+CGG | + | chr7_2:50135174-50135193 | Msa1061120:intron | 30.0% |
| ATGTGATATAACACAAACCT+CGG | - | chr7_2:50135306-50135325 | None:intergenic | 30.0% | |
| TTATCTAATTTCACAGCTCA+TGG | + | chr7_2:50135415-50135434 | Msa1061120:intron | 30.0% | |
| GTACTCTTACCTATTAGATA+TGG | + | chr7_2:50135439-50135458 | Msa1061120:CDS | 30.0% | |
| TATCTCACATACACAACATT+TGG | + | chr7_2:50135729-50135748 | Msa1061120:intron | 30.0% | |
| ATCTCACATACACAACATTT+GGG | + | chr7_2:50135730-50135749 | Msa1061120:intron | 30.0% | |
| AAACCATTCAATCCAATTCT+TGG | + | chr7_2:50135839-50135858 | Msa1061120:CDS | 30.0% | |
| ACTGAGGAAAGAAAATAAAC+AGG | - | chr7_2:50135930-50135949 | None:intergenic | 30.0% | |
| GACAAAACAACAGTTAAAAG+AGG | + | chr7_2:50136412-50136431 | Msa1061120:intron | 30.0% | |
| TGTGTATTATATGGATAAGG+AGG | + | chr7_2:50136546-50136565 | Msa1061120:intron | 30.0% | |
| ! | AGTTGCTAATTTTTGTAGGT+GGG | - | chr7_2:50136766-50136785 | None:intergenic | 30.0% |
| ! | AAGTTGCTAATTTTTGTAGG+TGG | - | chr7_2:50136767-50136786 | None:intergenic | 30.0% |
| !!! | TAGAATTTTTGGTTCTTCAG+AGG | - | chr7_2:50137273-50137292 | None:intergenic | 30.0% |
| TATGCTTTGCAAACAAACTT+CGG | - | chr7_2:50137556-50137575 | None:intergenic | 30.0% | |
| !! | TGCTTTGGAGATGATTAAAT+TGG | + | chr7_2:50137579-50137598 | Msa1061120:intron | 30.0% |
| !! | GCTTTGGAGATGATTAAATT+GGG | + | chr7_2:50137580-50137599 | Msa1061120:intron | 30.0% |
| ! | AATTGATTCAATTTGGCTAC+GGG | - | chr7_2:50137653-50137672 | None:intergenic | 30.0% |
| CTGTAGTCAAAGAGAAAATA+TGG | + | chr7_2:50137873-50137892 | Msa1061120:intron | 30.0% | |
| TACAAACCAAAGATGTCAAA+AGG | + | chr7_2:50138504-50138523 | Msa1061120:intron | 30.0% | |
| ACAAACCAAAGATGTCAAAA+GGG | + | chr7_2:50138505-50138524 | Msa1061120:intron | 30.0% | |
| ! | TCCTTGGCAATTTGATAATT+TGG | + | chr7_2:50138793-50138812 | Msa1061120:CDS | 30.0% |
| TCCAAATTATCAAATTGCCA+AGG | - | chr7_2:50138797-50138816 | None:intergenic | 30.0% | |
| ! | TTGGCAATTTGATAATTTGG+AGG | + | chr7_2:50138796-50138815 | Msa1061120:CDS | 30.0% |
| ! | AATTTGATCTTGTTTCTTGG+GGG | + | chr7_2:50138911-50138930 | Msa1061120:three_prime_UTR | 30.0% |
| ! | TTAGTTCAATCCATTTTGCA+TGG | + | chr7_2:50138979-50138998 | Msa1061120:three_prime_UTR | 30.0% |
| ! | ATCCATTTTGCATGGATAAA+TGG | + | chr7_2:50138987-50139006 | Msa1061120:three_prime_UTR | 30.0% |
| TACCATTTATCCATGCAAAA+TGG | - | chr7_2:50138992-50139011 | None:intergenic | 30.0% | |
| TAGAAAAATCAAAAGGGGTG+GGG | - | chr7_2:50133259-50133278 | None:intergenic | 35.0% | |
| GTTAGAAAAATCAAAAGGGG+TGG | - | chr7_2:50133261-50133280 | None:intergenic | 35.0% | |
| !!! | AAGTTAGGATTTTTGGTTGG+CGG | - | chr7_2:50133328-50133347 | None:intergenic | 35.0% |
| !! | GTAGTTTGTTTAGGATCCAT+TGG | - | chr7_2:50133577-50133596 | None:intergenic | 35.0% |
| !! | CTAGAAGCAGTAGTTTGTTT+AGG | - | chr7_2:50133586-50133605 | None:intergenic | 35.0% |
| ! | GCTTCAACTTTCTCCAATTT+TGG | + | chr7_2:50133637-50133656 | Msa1061120:CDS | 35.0% |
| !! | AGAAACAGAAGTGCCAAAAT+TGG | - | chr7_2:50133653-50133672 | None:intergenic | 35.0% |
| !! | TCTGTTTCTAAATCCGTTAC+TGG | + | chr7_2:50133664-50133683 | Msa1061120:CDS | 35.0% |
| !! | CTGTTTCTAAATCCGTTACT+GGG | + | chr7_2:50133665-50133684 | Msa1061120:CDS | 35.0% |
| ACTTCCATGATCTAGCAAAA+GGG | - | chr7_2:50133792-50133811 | None:intergenic | 35.0% | |
| AACTTCCATGATCTAGCAAA+AGG | - | chr7_2:50133793-50133812 | None:intergenic | 35.0% | |
| TTTGCTAGATCATGGAAGTT+TGG | + | chr7_2:50133793-50133812 | Msa1061120:intron | 35.0% | |
| TGTTAATAATTGTTCCACCC+AGG | + | chr7_2:50134046-50134065 | Msa1061120:intron | 35.0% | |
| CGAATCCAAATTCAATTCCT+GGG | - | chr7_2:50134066-50134085 | None:intergenic | 35.0% | |
| ACGAATCCAAATTCAATTCC+TGG | - | chr7_2:50134067-50134086 | None:intergenic | 35.0% | |
| ACATCAGCAACTAAGTAGTT+GGG | - | chr7_2:50134131-50134150 | None:intergenic | 35.0% | |
| TACATCAGCAACTAAGTAGT+TGG | - | chr7_2:50134132-50134151 | None:intergenic | 35.0% | |
| !! | TCTTGGAGTTTTTGTTGGTT+TGG | + | chr7_2:50134271-50134290 | Msa1061120:intron | 35.0% |
| !!! | GTTGATTTTTAGTACTCCTG+AGG | + | chr7_2:50134331-50134350 | Msa1061120:intron | 35.0% |
| TTGGAAGTTGTAAATCCAGA+AGG | + | chr7_2:50134356-50134375 | Msa1061120:CDS | 35.0% | |
| ! | ACACCTTCAATCTGAAATGT+TGG | + | chr7_2:50134548-50134567 | Msa1061120:intron | 35.0% |
| GAATCTGTTAAGTTACACTG+TGG | + | chr7_2:50134677-50134696 | Msa1061120:intron | 35.0% | |
| GGAATGTGCATATTGAAACA+TGG | + | chr7_2:50134769-50134788 | Msa1061120:intron | 35.0% | |
| ACCCACAATTTGACAAAACT+TGG | + | chr7_2:50134924-50134943 | Msa1061120:intron | 35.0% | |
| TGGTATGAAACAGTGTATTG+CGG | + | chr7_2:50134944-50134963 | Msa1061120:intron | 35.0% | |
| TAGAATGTCATGCAAACCAA+TGG | + | chr7_2:50135038-50135057 | Msa1061120:intron | 35.0% | |
| !! | TATTTATCTCATGGTGGACT+TGG | + | chr7_2:50135085-50135104 | Msa1061120:intron | 35.0% |
| !! | ATTTATCTCATGGTGGACTT+GGG | + | chr7_2:50135086-50135105 | Msa1061120:intron | 35.0% |
| ! | CTTTTGTACATTACAGGAAC+GGG | + | chr7_2:50135175-50135194 | Msa1061120:intron | 35.0% |
| ! | ATTGGCTCAAAAACGATAAC+TGG | - | chr7_2:50135263-50135282 | None:intergenic | 35.0% |
| ATTCTTTGTAGCATCGTCAT+TGG | - | chr7_2:50135281-50135300 | None:intergenic | 35.0% | |
| AATGACGATGCTACAAAGAA+TGG | + | chr7_2:50135280-50135299 | Msa1061120:CDS | 35.0% | |
| CTCTTACCTATTAGATATGG+CGG | + | chr7_2:50135442-50135461 | Msa1061120:CDS | 35.0% | |
| GCATATACAAGTCTCATGTA+TGG | - | chr7_2:50135482-50135501 | None:intergenic | 35.0% | |
| ! | GATACAGTATAGCGGAATTT+AGG | - | chr7_2:50135713-50135732 | None:intergenic | 35.0% |
| GTATGTGAGATACAGTATAG+CGG | - | chr7_2:50135721-50135740 | None:intergenic | 35.0% | |
| !! | TGCTGCAAAAAGCATCTATA+AGG | - | chr7_2:50135777-50135796 | None:intergenic | 35.0% |
| ACTTATGAAATGGCTAACCA+CGG | + | chr7_2:50135866-50135885 | Msa1061120:CDS | 35.0% | |
| ! | GCATGTAAACTTGGTGAAAT+CGG | - | chr7_2:50135969-50135988 | None:intergenic | 35.0% |
| AACCAAATTTCTTGGCAACT+CGG | + | chr7_2:50136191-50136210 | Msa1061120:CDS | 35.0% | |
| CTGATTTATATCCTGTTGGA+AGG | + | chr7_2:50136214-50136233 | Msa1061120:CDS | 35.0% | |
| CCTTCAAACGACAACTAAAA+AGG | - | chr7_2:50136253-50136272 | None:intergenic | 35.0% | |
| !!! | CCTTTTTAGTTGTCGTTTGA+AGG | + | chr7_2:50136250-50136269 | Msa1061120:intron | 35.0% |
| TCTCTGCAATAAGTTGTTCA+AGG | + | chr7_2:50136382-50136401 | Msa1061120:intron | 35.0% | |
| AACAGTTAAAAGAGGAACTG+AGG | + | chr7_2:50136420-50136439 | Msa1061120:intron | 35.0% | |
| ACAGTTAAAAGAGGAACTGA+GGG | + | chr7_2:50136421-50136440 | Msa1061120:intron | 35.0% | |
| TTAAGTTTGGGGATTGTTAG+TGG | + | chr7_2:50136475-50136494 | Msa1061120:intron | 35.0% | |
| ! | TTGCTAATTTTTGTAGGTGG+GGG | - | chr7_2:50136764-50136783 | None:intergenic | 35.0% |
| ! | GTTGCTAATTTTTGTAGGTG+GGG | - | chr7_2:50136765-50136784 | None:intergenic | 35.0% |
| !! | ACTTGATTTTTGGACGAACT+TGG | + | chr7_2:50136783-50136802 | Msa1061120:CDS | 35.0% |
| ATGGAGCAAGTAACTGAAAT+TGG | - | chr7_2:50137148-50137167 | None:intergenic | 35.0% | |
| ACATTTACATATTGCAGAGC+TGG | + | chr7_2:50137215-50137234 | Msa1061120:intron | 35.0% | |
| CATATCCATCCACTTCATAT+CGG | - | chr7_2:50137241-50137260 | None:intergenic | 35.0% | |
| CAACTCTTTCATCGATGTTA+TGG | + | chr7_2:50137387-50137406 | Msa1061120:intron | 35.0% | |
| ! | ATCTAAAAGAGTGTGCTGTT+AGG | - | chr7_2:50137435-50137454 | None:intergenic | 35.0% |
| TTGCAAAGCATATGATGCTT+TGG | + | chr7_2:50137564-50137583 | Msa1061120:intron | 35.0% | |
| TAATGCTGATACGCTTTCTA+AGG | - | chr7_2:50137941-50137960 | None:intergenic | 35.0% | |
| CTACTAACACAAGCATTTGA+CGG | - | chr7_2:50138022-50138041 | None:intergenic | 35.0% | |
| AGTTGCTGAAACTCCTAAAA+AGG | + | chr7_2:50138292-50138311 | Msa1061120:CDS | 35.0% | |
| !! | ACATCTTTGGTTTGTAGAGA+GGG | - | chr7_2:50138500-50138519 | None:intergenic | 35.0% |
| CAAACCAAAGATGTCAAAAG+GGG | + | chr7_2:50138506-50138525 | Msa1061120:intron | 35.0% | |
| AAACCAAAGATGTCAAAAGG+GGG | + | chr7_2:50138507-50138526 | Msa1061120:intron | 35.0% | |
| !! | TATTTTTCAGTTTGGAGGAG+AGG | + | chr7_2:50138573-50138592 | Msa1061120:intron | 35.0% |
| TTGAATTCTGGTCTACTTTC+AGG | - | chr7_2:50138773-50138792 | None:intergenic | 35.0% | |
| AATTGCCAAGGATTGAATTC+TGG | - | chr7_2:50138785-50138804 | None:intergenic | 35.0% | |
| TGATAATTTGGAGGCTGAAT+AGG | + | chr7_2:50138805-50138824 | Msa1061120:CDS | 35.0% | |
| !! | GCAAAGAATATAGCTCTAGT+TGG | - | chr7_2:50139019-50139038 | None:intergenic | 35.0% |
| GAGAACAGCGAAGAAAAGTT+AGG | - | chr7_2:50133343-50133362 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTCACCGATTTCCA+TGG | + | chr7_2:50133549-50133568 | Msa1061120:exon | 40.0% |
| ACTACTGCTTCTAGTAGTAG+TGG | + | chr7_2:50133592-50133611 | Msa1061120:CDS | 40.0% | |
| ! | TTTCCCCTTTTGCTAGATCA+TGG | + | chr7_2:50133785-50133804 | Msa1061120:intron | 40.0% |
| CTTCCATGATCTAGCAAAAG+GGG | - | chr7_2:50133791-50133810 | None:intergenic | 40.0% | |
| GTTATTAATACTCTGGCTGC+CGG | + | chr7_2:50133880-50133899 | Msa1061120:intron | 40.0% | |
| TTATTAATACTCTGGCTGCC+GGG | + | chr7_2:50133881-50133900 | Msa1061120:intron | 40.0% | |
| ! | GGACTTGGTAATTCAGAGTT+CGG | + | chr7_2:50133908-50133927 | Msa1061120:intron | 40.0% |
| GTATGGTCAACTATGAAGCA+CGG | + | chr7_2:50133948-50133967 | Msa1061120:intron | 40.0% | |
| TCAACTATGAAGCACGGATA+CGG | + | chr7_2:50133954-50133973 | Msa1061120:intron | 40.0% | |
| TTCCACCCAGGAATTGAATT+TGG | + | chr7_2:50134058-50134077 | Msa1061120:intron | 40.0% | |
| ATCCAAATTCAATTCCTGGG+TGG | - | chr7_2:50134063-50134082 | None:intergenic | 40.0% | |
| GTCCGAATGATTCATCCTAT+GGG | + | chr7_2:50134085-50134104 | Msa1061120:intron | 40.0% | |
| TCCGAATGATTCATCCTATG+GGG | + | chr7_2:50134086-50134105 | Msa1061120:intron | 40.0% | |
| TCCCCATAGGATGAATCATT+CGG | - | chr7_2:50134090-50134109 | None:intergenic | 40.0% | |
| GTAGTTAATTAGCTCCCCAT+AGG | - | chr7_2:50134103-50134122 | None:intergenic | 40.0% | |
| ! | TTTTAGTACTCCTGAGGGAT+TGG | + | chr7_2:50134337-50134356 | Msa1061120:intron | 40.0% |
| TTTACAACTTCCAATCCCTC+AGG | - | chr7_2:50134350-50134369 | None:intergenic | 40.0% | |
| GAAGTTGTAAATCCAGAAGG+AGG | + | chr7_2:50134359-50134378 | Msa1061120:CDS | 40.0% | |
| TGTTAGTGTCAGTGCTTCAT+AGG | - | chr7_2:50134452-50134471 | None:intergenic | 40.0% | |
| ! | TTTCAGATTGAAGGTGTGTC+AGG | - | chr7_2:50134545-50134564 | None:intergenic | 40.0% |
| GCACCAACATTTCAGATTGA+AGG | - | chr7_2:50134554-50134573 | None:intergenic | 40.0% | |
| AATGTCATGCAAACCAATGG+TGG | + | chr7_2:50135041-50135060 | Msa1061120:intron | 40.0% | |
| CAGATAATCAATGCCACCAT+TGG | - | chr7_2:50135057-50135076 | None:intergenic | 40.0% | |
| !! | TGGCTCTGATATCACATCAA+TGG | + | chr7_2:50135229-50135248 | Msa1061120:CDS | 40.0% |
| TCTCATCCGCCATATCTAAT+AGG | - | chr7_2:50135451-50135470 | None:intergenic | 40.0% | |
| GACTGTGAAATGATGCTTAC+AGG | - | chr7_2:50135504-50135523 | None:intergenic | 40.0% | |
| ACATTTGGGCATACATTGCA+TGG | + | chr7_2:50135744-50135763 | Msa1061120:intron | 40.0% | |
| ACTATGCCTATCAACGAACA+TGG | + | chr7_2:50135816-50135835 | Msa1061120:CDS | 40.0% | |
| TGGTTTCCATGTTCGTTGAT+AGG | - | chr7_2:50135825-50135844 | None:intergenic | 40.0% | |
| TCGCCAAGAATTGGATTGAA+TGG | - | chr7_2:50135845-50135864 | None:intergenic | 40.0% | |
| TCATAAGTCTCGCCAAGAAT+TGG | - | chr7_2:50135854-50135873 | None:intergenic | 40.0% | |
| TCTTGGCGAGACTTATGAAA+TGG | + | chr7_2:50135856-50135875 | Msa1061120:CDS | 40.0% | |
| ! | CATGTCATTTATAGCAGAGC+AGG | + | chr7_2:50135892-50135911 | Msa1061120:CDS | 40.0% |
| ! | CAAAGAGAGGCATGTAAACT+TGG | - | chr7_2:50135978-50135997 | None:intergenic | 40.0% |
| GAAAACTACGCATATTCCAG+AGG | - | chr7_2:50136022-50136041 | None:intergenic | 40.0% | |
| ! | ATGTTCATTTTCAGCATGCC+CGG | - | chr7_2:50136142-50136161 | None:intergenic | 40.0% |
| ! | TCGGCTGATTTATATCCTGT+TGG | + | chr7_2:50136210-50136229 | Msa1061120:CDS | 40.0% |
| ATTGCAGAGAGAGGAATATG+TGG | - | chr7_2:50136372-50136391 | None:intergenic | 40.0% | |
| GAACAACTTATTGCAGAGAG+AGG | - | chr7_2:50136381-50136400 | None:intergenic | 40.0% | |
| TAAACGCGCTACTACTTATC+TGG | + | chr7_2:50136686-50136705 | Msa1061120:intron | 40.0% | |
| CGTGTTACACTCAAAAGAGA+TGG | + | chr7_2:50136719-50136738 | Msa1061120:CDS | 40.0% | |
| ! | ACGAACTTGGATTGATTCAC+CGG | + | chr7_2:50136796-50136815 | Msa1061120:CDS | 40.0% |
| GGTCCTGACAAATTTGACTA+CGG | + | chr7_2:50136826-50136845 | Msa1061120:CDS | 40.0% | |
| GTCCTGACAAATTTGACTAC+GGG | + | chr7_2:50136827-50136846 | Msa1061120:CDS | 40.0% | |
| TCCTGACAAATTTGACTACG+GGG | + | chr7_2:50136828-50136847 | Msa1061120:CDS | 40.0% | |
| !!! | GTGCTTTATTTTCAACCGTG+TGG | + | chr7_2:50136860-50136879 | Msa1061120:CDS | 40.0% |
| !! | TTTATTTTCAACCGTGTGGC+TGG | + | chr7_2:50136864-50136883 | Msa1061120:CDS | 40.0% |
| GTGCATATACTGTAGGTTAC+AGG | - | chr7_2:50136950-50136969 | None:intergenic | 40.0% | |
| GTAACCTACAGTATATGCAC+TGG | + | chr7_2:50136950-50136969 | Msa1061120:intron | 40.0% | |
| TATCAAGTTTGTGACCCTGA+AGG | + | chr7_2:50137323-50137342 | Msa1061120:CDS | 40.0% | |
| CTCATTAAGCCTGATAGCTT+TGG | + | chr7_2:50137502-50137521 | Msa1061120:intron | 40.0% | |
| TACTATACAAAGGGCCTGTT+TGG | + | chr7_2:50137742-50137761 | Msa1061120:intron | 40.0% | |
| ACAAGCATTTGACGGTGTTT+GGG | - | chr7_2:50138014-50138033 | None:intergenic | 40.0% | |
| GAAGACACTCTTTCAGTGTT+TGG | - | chr7_2:50138076-50138095 | None:intergenic | 40.0% | |
| !! | AACACTGAAAGAGTGTCTTC+AGG | + | chr7_2:50138076-50138095 | Msa1061120:intron | 40.0% |
| ATGTATCGTGTATCCCTGTT+TGG | + | chr7_2:50138197-50138216 | Msa1061120:intron | 40.0% | |
| GCAGTAAATCACACCAAACA+GGG | - | chr7_2:50138213-50138232 | None:intergenic | 40.0% | |
| AGCAGTAAATCACACCAAAC+AGG | - | chr7_2:50138214-50138233 | None:intergenic | 40.0% | |
| ! | ATCAAGTTGTTCCATTCTGC+AGG | + | chr7_2:50138262-50138281 | Msa1061120:intron | 40.0% |
| GTTAAGCTTGTGCGCAAAAT+GGG | - | chr7_2:50138333-50138352 | None:intergenic | 40.0% | |
| TGTTAAGCTTGTGCGCAAAA+TGG | - | chr7_2:50138334-50138353 | None:intergenic | 40.0% | |
| TCTGATGGCAACAACTTCTT+GGG | - | chr7_2:50138371-50138390 | None:intergenic | 40.0% | |
| !! | GACATCTTTGGTTTGTAGAG+AGG | - | chr7_2:50138501-50138520 | None:intergenic | 40.0% |
| TCTGTCAGATCAAACCATCT+AGG | - | chr7_2:50138647-50138666 | None:intergenic | 40.0% | |
| TAGATGGTTTGATCTGACAG+AGG | + | chr7_2:50138646-50138665 | Msa1061120:CDS | 40.0% | |
| AGGAAGTAACTTCAACACCT+TGG | + | chr7_2:50138666-50138685 | Msa1061120:CDS | 40.0% | |
| GGAAGTAACTTCAACACCTT+GGG | + | chr7_2:50138667-50138686 | Msa1061120:CDS | 40.0% | |
| GAAGTAACTTCAACACCTTG+GGG | + | chr7_2:50138668-50138687 | Msa1061120:CDS | 40.0% | |
| TAAACTTCCAATTCACCCCA+AGG | - | chr7_2:50138686-50138705 | None:intergenic | 40.0% | |
| GTAGACCAGAATTCAATCCT+TGG | + | chr7_2:50138777-50138796 | Msa1061120:CDS | 40.0% | |
| !! | TCCATTGGTGCCATGGAAAT+CGG | - | chr7_2:50133562-50133581 | None:intergenic | 45.0% |
| !! | TTTAGGATCCATTGGTGCCA+TGG | - | chr7_2:50133569-50133588 | None:intergenic | 45.0% |
| ACTGCTTCTAGTAGTAGTGG+TGG | + | chr7_2:50133595-50133614 | Msa1061120:CDS | 45.0% | |
| TATTAATACTCTGGCTGCCG+GGG | + | chr7_2:50133882-50133901 | Msa1061120:intron | 45.0% | |
| CGTCCGAATGATTCATCCTA+TGG | + | chr7_2:50134084-50134103 | Msa1061120:intron | 45.0% | |
| AGGAACTGAAGATGCTGAAG+AGG | + | chr7_2:50134379-50134398 | Msa1061120:CDS | 45.0% | |
| TGCTGAAGAGGAAGCTAAGA+AGG | + | chr7_2:50134391-50134410 | Msa1061120:CDS | 45.0% | |
| GCTGAAGAGGAAGCTAAGAA+GGG | + | chr7_2:50134392-50134411 | Msa1061120:CDS | 45.0% | |
| ! | TAACACATACGCGTTGACAC+TGG | + | chr7_2:50134467-50134486 | Msa1061120:intron | 45.0% |
| ACATGCAGAGAAGAGCTCAT+AGG | - | chr7_2:50134821-50134840 | None:intergenic | 45.0% | |
| TTGTCAAATTGTGGGTGCAG+TGG | - | chr7_2:50134920-50134939 | None:intergenic | 45.0% | |
| AGTGTATTGCGGAACACTAG+TGG | + | chr7_2:50134955-50134974 | Msa1061120:intron | 45.0% | |
| ATTGCTTGCGGTCATATTGC+GGG | - | chr7_2:50135008-50135027 | None:intergenic | 45.0% | |
| CATTGCTTGCGGTCATATTG+CGG | - | chr7_2:50135009-50135028 | None:intergenic | 45.0% | |
| TACAGGAACGGGATAGTTAC+TGG | + | chr7_2:50135186-50135205 | Msa1061120:intron | 45.0% | |
| TAGCACTAAATCACGTACCG+CGG | + | chr7_2:50135673-50135692 | Msa1061120:intron | 45.0% | |
| !! | AGGTGAACAGCTATTTTCCG+CGG | - | chr7_2:50135693-50135712 | None:intergenic | 45.0% |
| TATGAAATGGCTAACCACGG+TGG | + | chr7_2:50135869-50135888 | Msa1061120:CDS | 45.0% | |
| CTATAAATGACATGCCACCG+TGG | - | chr7_2:50135886-50135905 | None:intergenic | 45.0% | |
| AGCCGAGTTGCCAAGAAATT+TGG | - | chr7_2:50136196-50136215 | None:intergenic | 45.0% | |
| GCTACTACTTATCTGGATGC+AGG | + | chr7_2:50136693-50136712 | Msa1061120:intron | 45.0% | |
| AGATGGTGTGACGCTTGATT+TGG | + | chr7_2:50136736-50136755 | Msa1061120:CDS | 45.0% | |
| ! | CGAACTTGGATTGATTCACC+GGG | + | chr7_2:50136797-50136816 | Msa1061120:CDS | 45.0% |
| ! | GAACTTGGATTGATTCACCG+GGG | + | chr7_2:50136798-50136817 | Msa1061120:CDS | 45.0% |
| ! | AACTTGGATTGATTCACCGG+GGG | + | chr7_2:50136799-50136818 | Msa1061120:CDS | 45.0% |
| CCTGACAAATTTGACTACGG+GGG | + | chr7_2:50136829-50136848 | Msa1061120:CDS | 45.0% | |
| CCATCCAGTGCATATACTGT+AGG | - | chr7_2:50136957-50136976 | None:intergenic | 45.0% | |
| CCTACAGTATATGCACTGGA+TGG | + | chr7_2:50136954-50136973 | Msa1061120:intron | 45.0% | |
| ! | AGTTACTGGCTGCTACAGTA+TGG | - | chr7_2:50136990-50137009 | None:intergenic | 45.0% |
| CATCGATGTTATGGCCATAG+AGG | + | chr7_2:50137396-50137415 | Msa1061120:intron | 45.0% | |
| GCGATAGCATATCACCTCTA+TGG | - | chr7_2:50137413-50137432 | None:intergenic | 45.0% | |
| CACAAGCATTTGACGGTGTT+TGG | - | chr7_2:50138015-50138034 | None:intergenic | 45.0% | |
| GTTGTTCCATTCTGCAGGTT+TGG | + | chr7_2:50138267-50138286 | Msa1061120:intron | 45.0% | |
| AACTCTCCAAACCTGCAGAA+TGG | - | chr7_2:50138276-50138295 | None:intergenic | 45.0% | |
| TGTGCGCAAAATGGGTGTAT+TGG | - | chr7_2:50138325-50138344 | None:intergenic | 45.0% | |
| GTCTGATGGCAACAACTTCT+TGG | - | chr7_2:50138372-50138391 | None:intergenic | 45.0% | |
| TCGTCTTCGTCCTGATAGAA+TGG | + | chr7_2:50138394-50138413 | Msa1061120:CDS | 45.0% | |
| ! | GAACCCCCTTTTGACATCTT+TGG | - | chr7_2:50138513-50138532 | None:intergenic | 45.0% |
| ACCAGAAGTTCACTCCTAGA+TGG | + | chr7_2:50138630-50138649 | Msa1061120:CDS | 45.0% | |
| ACCATCTAGGAGTGAACTTC+TGG | - | chr7_2:50138634-50138653 | None:intergenic | 45.0% | |
| TTCAACACCTTGGGGTGAAT+TGG | + | chr7_2:50138676-50138695 | Msa1061120:CDS | 45.0% | |
| AGGCTGAATAGGCATTCTTG+TGG | + | chr7_2:50138816-50138835 | Msa1061120:exon | 45.0% | |
| ! | ACCGATTTCCATGGCACCAA+TGG | + | chr7_2:50133558-50133577 | Msa1061120:exon | 50.0% |
| GCTTCTAGTAGTAGTGGTGG+TGG | + | chr7_2:50133598-50133617 | Msa1061120:CDS | 50.0% | |
| GAATTACCAAGTCCCTTCCC+CGG | - | chr7_2:50133902-50133921 | None:intergenic | 50.0% | |
| ! | TATTAGCTGTGTCGGCGTGT+CGG | - | chr7_2:50133983-50134002 | None:intergenic | 50.0% |
| GCATCTTCAGTTCCTCCTTC+TGG | - | chr7_2:50134374-50134393 | None:intergenic | 50.0% | |
| AGGAAGCTAAGAAGGGACGA+TGG | + | chr7_2:50134399-50134418 | Msa1061120:CDS | 50.0% | |
| GAAGGGACGATGGAAAGATG+AGG | + | chr7_2:50134409-50134428 | Msa1061120:CDS | 50.0% | |
| TTGCTTGCGGTCATATTGCG+GGG | - | chr7_2:50135007-50135026 | None:intergenic | 50.0% | |
| CGCAATATGACCGCAAGCAA+TGG | + | chr7_2:50135007-50135026 | Msa1061120:intron | 50.0% | |
| TATCCGCTTGCCATTGCTTG+CGG | - | chr7_2:50135020-50135039 | None:intergenic | 50.0% | |
| GATGCTACAAAGAATGGCCG+AGG | + | chr7_2:50135286-50135305 | Msa1061120:CDS | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr7_2:50135526-50135545 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_2:50135525-50135544 | None:intergenic | 50.0% | |
| CAACGAGACTACCTTCCAAC+AGG | - | chr7_2:50136228-50136247 | None:intergenic | 50.0% | |
| ! | GATTGATTCACCGGGGGATA+TGG | + | chr7_2:50136805-50136824 | Msa1061120:CDS | 50.0% |
| TTTGTCAGGACCATATCCCC+CGG | - | chr7_2:50136818-50136837 | None:intergenic | 50.0% | |
| CCCCCGTAGTCAAATTTGTC+AGG | - | chr7_2:50136832-50136851 | None:intergenic | 50.0% | |
| ! | TTTCAACCGTGTGGCTGGTT+TGG | + | chr7_2:50136869-50136888 | Msa1061120:CDS | 50.0% |
| !! | TTCAACCGTGTGGCTGGTTT+GGG | + | chr7_2:50136870-50136889 | Msa1061120:CDS | 50.0% |
| TCATACCCAAACCAGCCACA+CGG | - | chr7_2:50136878-50136897 | None:intergenic | 50.0% | |
| ! | GGCTGCTACAGTATGGACTA+TGG | - | chr7_2:50136983-50137002 | None:intergenic | 50.0% |
| CTGGAAGTGGTTCTCCTTCA+GGG | - | chr7_2:50137340-50137359 | None:intergenic | 50.0% | |
| ACGGTGTTTGGGAGAGCTTA+TGG | - | chr7_2:50138003-50138022 | None:intergenic | 50.0% | |
| TGCTCAAGGGCCATTCTATC+AGG | - | chr7_2:50138407-50138426 | None:intergenic | 50.0% | |
| TGATAGAATGGCCCTTGAGC+AGG | + | chr7_2:50138406-50138425 | Msa1061120:CDS | 50.0% | |
| GATAGAATGGCCCTTGAGCA+GGG | + | chr7_2:50138407-50138426 | Msa1061120:CDS | 50.0% | |
| TTACCTGCTCTTCTCGTTGC+CGG | - | chr7_2:50138447-50138466 | None:intergenic | 50.0% | |
| AGCTGAGAAGAGAAACCGAG+AGG | + | chr7_2:50138601-50138620 | Msa1061120:CDS | 50.0% | |
| !! | ACTTCTGGTTCTTCGCCTCT+CGG | - | chr7_2:50138619-50138638 | None:intergenic | 50.0% |
| CAGAACTATCTACAGCAGCG+CGG | - | chr7_2:50138736-50138755 | None:intergenic | 50.0% | |
| TGACCGCAAGCAATGGCAAG+CGG | + | chr7_2:50135014-50135033 | Msa1061120:intron | 55.0% | |
| CATCACCCTCCAATGAGTGC+CGG | + | chr7_2:50136120-50136139 | Msa1061120:CDS | 55.0% | |
| ATCACCCTCCAATGAGTGCC+GGG | + | chr7_2:50136121-50136140 | Msa1061120:CDS | 55.0% | |
| CAGAGCTGGCCGATATGAAG+TGG | + | chr7_2:50137229-50137248 | Msa1061120:intron | 55.0% | |
| GCTGGCCGATATGAAGTGGA+TGG | + | chr7_2:50137233-50137252 | Msa1061120:CDS | 55.0% | |
| CCTGGAAGTGGTTCTCCTTC+AGG | - | chr7_2:50137341-50137360 | None:intergenic | 55.0% | |
| CCTGAAGGAGAACCACTTCC+AGG | + | chr7_2:50137338-50137357 | Msa1061120:CDS | 55.0% | |
| TTGAGCTCAGTGCCTGGAAG+TGG | - | chr7_2:50137353-50137372 | None:intergenic | 55.0% | |
| !! | TCCAGGCACTGAGCTCAAAG+AGG | + | chr7_2:50137355-50137374 | Msa1061120:CDS | 55.0% |
| ACCTCTTTGAGCTCAGTGCC+TGG | - | chr7_2:50137359-50137378 | None:intergenic | 55.0% | |
| GGACGAAGACGAGAGTCTGA+TGG | - | chr7_2:50138386-50138405 | None:intergenic | 55.0% | |
| GGATAGGTCACCCTGCTCAA+GGG | - | chr7_2:50138420-50138439 | None:intergenic | 55.0% | |
| AATACTCTGGCTGCCGGGGA+AGG | + | chr7_2:50133886-50133905 | Msa1061120:intron | 60.0% | |
| ATACTCTGGCTGCCGGGGAA+GGG | + | chr7_2:50133887-50133906 | Msa1061120:intron | 60.0% | |
| ATTGCGGGGCTATGGCGTAG+CGG | - | chr7_2:50134993-50135012 | None:intergenic | 60.0% | |
| GCGGTCATATTGCGGGGCTA+TGG | - | chr7_2:50135001-50135020 | None:intergenic | 60.0% | |
| CATGCCCGGCACTCATTGGA+GGG | - | chr7_2:50136128-50136147 | None:intergenic | 60.0% | |
| TCAGCATGCCCGGCACTCAT+TGG | - | chr7_2:50136132-50136151 | None:intergenic | 60.0% | |
| CGGATAGGTCACCCTGCTCA+AGG | - | chr7_2:50138421-50138440 | None:intergenic | 60.0% | |
| CAGGGTGACCTATCCGTGTC+CGG | + | chr7_2:50138425-50138444 | Msa1061120:CDS | 60.0% | |
| TCTCGTTGCCGGACACGGAT+AGG | - | chr7_2:50138436-50138455 | None:intergenic | 60.0% | |
| GCTCTTCTCGTTGCCGGACA+CGG | - | chr7_2:50138441-50138460 | None:intergenic | 60.0% | |
| TGTCCGGCAACGAGAAGAGC+AGG | + | chr7_2:50138441-50138460 | Msa1061120:CDS | 60.0% | |
| GCATGCCCGGCACTCATTGG+AGG | - | chr7_2:50136129-50136148 | None:intergenic | 65.0% | |
| TGGCTGCCGGGGAAGGGACT+TGG | + | chr7_2:50133893-50133912 | Msa1061120:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 50133234 | 50139141 | 50133234 | ID=Msa1061120;Name=Msa1061120 |
| chr7_2 | mRNA | 50133234 | 50139141 | 50133234 | ID=Msa1061120-mRNA-1;Parent=Msa1061120;Name=Msa1061120-mRNA-1;_AED=0.09;_eAED=0.09;_QI=334|1|1|1|1|1|10|315|460 |
| chr7_2 | exon | 50133234 | 50133686 | 50133234 | ID=Msa1061120-mRNA-1:exon:9040;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50134343 | 50134430 | 50134343 | ID=Msa1061120-mRNA-1:exon:9041;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50135191 | 50135307 | 50135191 | ID=Msa1061120-mRNA-1:exon:9042;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50135431 | 50135503 | 50135431 | ID=Msa1061120-mRNA-1:exon:9043;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50135795 | 50135913 | 50135795 | ID=Msa1061120-mRNA-1:exon:9044;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50136114 | 50136235 | 50136114 | ID=Msa1061120-mRNA-1:exon:9045;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50136715 | 50136891 | 50136715 | ID=Msa1061120-mRNA-1:exon:9046;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50137232 | 50137376 | 50137232 | ID=Msa1061120-mRNA-1:exon:9047;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50138284 | 50138462 | 50138284 | ID=Msa1061120-mRNA-1:exon:9048;Parent=Msa1061120-mRNA-1 |
| chr7_2 | exon | 50138583 | 50139141 | 50138583 | ID=Msa1061120-mRNA-1:exon:9049;Parent=Msa1061120-mRNA-1 |
| chr7_2 | five_prime_UTR | 50133234 | 50133567 | 50133234 | ID=Msa1061120-mRNA-1:five_prime_utr;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50133568 | 50133686 | 50133568 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50134343 | 50134430 | 50134343 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50135191 | 50135307 | 50135191 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50135431 | 50135503 | 50135431 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50135795 | 50135913 | 50135795 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50136114 | 50136235 | 50136114 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50136715 | 50136891 | 50136715 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50137232 | 50137376 | 50137232 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50138284 | 50138462 | 50138284 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | CDS | 50138583 | 50138826 | 50138583 | ID=Msa1061120-mRNA-1:cds;Parent=Msa1061120-mRNA-1 |
| chr7_2 | three_prime_UTR | 50138827 | 50139141 | 50138827 | ID=Msa1061120-mRNA-1:three_prime_utr;Parent=Msa1061120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
