Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061380 | XP_013448908.1 | 94.226 | 433 | 18 | 2 | 1 | 431 | 1 | 428 | 0.0 | 830 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061380 | A0A072UAU5 | 94.226 | 433 | 18 | 2 | 1 | 431 | 1 | 428 | 0.0 | 830 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0648220 | Msa1061380 | 0.815328 | 9.778530e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061380 | MtrunA17_Chr7g0239151 | 94.226 | 433 | 18 | 2 | 1 | 431 | 1 | 428 | 0.0 | 830 |
| Msa1061380 | MtrunA17_Chr6g0471711 | 85.039 | 127 | 17 | 1 | 151 | 275 | 1 | 127 | 3.10e-72 | 223 |
| Msa1061380 | MtrunA17_Chr6g0471701 | 72.500 | 120 | 25 | 2 | 312 | 431 | 1 | 112 | 2.01e-53 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1061380 | AT5G02130.1 | 42.967 | 391 | 195 | 6 | 48 | 431 | 51 | 420 | 9.12e-96 | 294 |
Find 116 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATTATCCGACTCTTTA+TGG | 0.085192 | 7_2:+50727646 | Msa1061380:CDS |
| CCTTTGGAATTCTCATGTTT+TGG | 0.131328 | 7_2:-50723457 | None:intergenic |
| TTACCTTCAGGTTCAGTTTC+AGG | 0.173100 | 7_2:-50725864 | None:intergenic |
| AGCAGCAGATAAATTCTTTA+TGG | 0.220723 | 7_2:+50727964 | Msa1061380:three_prime_UTR |
| TTTAGGTGTGGCAAATTCTT+AGG | 0.269835 | 7_2:-50722784 | None:intergenic |
| TATCTTGCTGCTGAAGGTTT+AGG | 0.296343 | 7_2:+50727783 | Msa1061380:three_prime_UTR |
| TTGTCGATTGTCGTATTTGC+AGG | 0.302525 | 7_2:+50727730 | Msa1061380:CDS |
| GTTCGTGCTAGAGCGATTAA+AGG | 0.313151 | 7_2:+50724026 | Msa1061380:CDS |
| AAATTCAAAGTTTCAAAGTA+TGG | 0.317959 | 7_2:+50728060 | Msa1061380:three_prime_UTR |
| ATGCAAGCCATGTGCGCTTT+AGG | 0.320595 | 7_2:+50724441 | Msa1061380:CDS |
| AGTACTTTAATCAATGGATT+AGG | 0.322219 | 7_2:+50728016 | Msa1061380:three_prime_UTR |
| ATCGTATGGTATGGGTTATT+TGG | 0.325009 | 7_2:+50723390 | Msa1061380:CDS |
| GAGAGAAGAATGGTGGTGTT+AGG | 0.335998 | 7_2:-50722910 | None:intergenic |
| GGACAGCTTGAATCACATTT+GGG | 0.337115 | 7_2:+50724462 | Msa1061380:CDS |
| TCATGTACATAACATTTCTA+AGG | 0.339505 | 7_2:+50727916 | Msa1061380:three_prime_UTR |
| AGGACAGCTTGAATCACATT+TGG | 0.343595 | 7_2:+50724461 | Msa1061380:CDS |
| GGGTGCTGTCTTAACAAATA+TGG | 0.353609 | 7_2:+50724797 | Msa1061380:CDS |
| AGTAGTTCTGCCTAGTTTGT+TGG | 0.369662 | 7_2:-50724311 | None:intergenic |
| TGTTATGATGGCATATACTA+TGG | 0.379183 | 7_2:+50727884 | Msa1061380:three_prime_UTR |
| CAGATCATTCAACACTGGTT+TGG | 0.380149 | 7_2:+50723044 | Msa1061380:CDS |
| TATATTAGTACTTTAATCAA+TGG | 0.383590 | 7_2:+50728010 | Msa1061380:three_prime_UTR |
| TAAAGGGACTCAAAATAAAC+TGG | 0.392497 | 7_2:-50728090 | None:intergenic |
| TGGCTCCTACTAAAACATTC+TGG | 0.394099 | 7_2:-50724353 | None:intergenic |
| CATTGTTGGTTGAAGGATTG+AGG | 0.397265 | 7_2:-50722938 | None:intergenic |
| CAAATATGGCTCTTATGTAT+AGG | 0.397281 | 7_2:+50724811 | Msa1061380:CDS |
| ATGAGTTTGTTGCTTTGTTT+AGG | 0.397708 | 7_2:-50722801 | None:intergenic |
| TCAAAAGCTCCTCTGCATTA+CGG | 0.402619 | 7_2:-50724595 | None:intergenic |
| AGAATTGAGTAATTCTTACT+TGG | 0.403251 | 7_2:+50723664 | Msa1061380:CDS |
| TGCGAAACATTGTTGGTTGA+AGG | 0.406663 | 7_2:-50722945 | None:intergenic |
| ATTCAACACTGGTTTGGCCT+TGG | 0.423079 | 7_2:+50723050 | Msa1061380:CDS |
| AGTAAGCAAAGCAATTCCTT+TGG | 0.424288 | 7_2:-50723473 | None:intergenic |
| ACTAAGGCAGATCAGATCTA+TGG | 0.431786 | 7_2:+50724629 | Msa1061380:CDS |
| GCTGCTTATCTTGCTGCTGA+AGG | 0.433815 | 7_2:+50727777 | Msa1061380:three_prime_UTR |
| GTTGAATGATCTGAATGAAA+TGG | 0.438790 | 7_2:-50723034 | None:intergenic |
| GCAAGATAAGCAGCAGAAGA+TGG | 0.439086 | 7_2:-50727768 | None:intergenic |
| TTTGACAAAGGCACTGACTA+AGG | 0.439560 | 7_2:+50724613 | Msa1061380:CDS |
| GTGAGAGAAACAAGAGCTCT+TGG | 0.440566 | 7_2:-50722997 | None:intergenic |
| GACACGAAAAGTGGTGACTA+TGG | 0.441151 | 7_2:+50727938 | Msa1061380:three_prime_UTR |
| TCAGGTTCAGTTTCAGGTGG+TGG | 0.450580 | 7_2:-50725858 | None:intergenic |
| TTGTAGTTAAAATGTTATGA+TGG | 0.451053 | 7_2:+50727872 | Msa1061380:three_prime_UTR |
| GCCCCTCTCTTTAAGTTCAG+TGG | 0.457809 | 7_2:-50724373 | None:intergenic |
| CGGAGAGCTTTGTCAAAGAA+AGG | 0.457909 | 7_2:-50724176 | None:intergenic |
| GTTAAGACAGCACCCAGCTT+GGG | 0.458594 | 7_2:-50724789 | None:intergenic |
| CAAATACGACAATCGACAAC+TGG | 0.459425 | 7_2:-50727726 | None:intergenic |
| TGCTAGAGCGATTAAAGGGC+TGG | 0.467181 | 7_2:+50724031 | Msa1061380:CDS |
| TTGAATGATCTGAATGAAAT+GGG | 0.475461 | 7_2:-50723033 | None:intergenic |
| ATATCATTTCTCTTTACCGT+TGG | 0.484774 | 7_2:-50726735 | None:intergenic |
| GAAGCTATGCGAAACATTGT+TGG | 0.488528 | 7_2:-50722952 | None:intergenic |
| GAAGTAGTAATATCCATTGT+TGG | 0.491899 | 7_2:+50727986 | Msa1061380:three_prime_UTR |
| TGAGGGGTTTGAGAGAAGAA+TGG | 0.494383 | 7_2:-50722920 | None:intergenic |
| ATTGTTGGTTGAAGGATTGA+GGG | 0.496253 | 7_2:-50722937 | None:intergenic |
| ACTTCATCTAGAGTTGGAAC+AGG | 0.500884 | 7_2:+50723838 | Msa1061380:CDS |
| TTCGTGCTAGAGCGATTAAA+GGG | 0.502623 | 7_2:+50724027 | Msa1061380:CDS |
| TAGCTGTTGATGATGTTGTT+CGG | 0.509243 | 7_2:+50723082 | Msa1061380:CDS |
| GGTAAAGAGAAATGATATAG+TGG | 0.510956 | 7_2:+50726740 | Msa1061380:CDS |
| TTGAGATGGGTTTAGAGTGA+GGG | 0.515776 | 7_2:-50722875 | None:intergenic |
| GTGAAGGGAGATATTAAGTC+AGG | 0.517772 | 7_2:+50724062 | Msa1061380:CDS |
| TTTGAATCAATCCTAAACCT+AGG | 0.522863 | 7_2:+50722823 | Msa1061380:five_prime_UTR |
| GAAAATTAGTTCATAGTGAG+TGG | 0.525080 | 7_2:+50727846 | Msa1061380:three_prime_UTR |
| GAGAGGGGCAATGTATACTT+AGG | 0.528410 | 7_2:+50724387 | Msa1061380:CDS |
| TTGAATCAATCCTAAACCTA+GGG | 0.536426 | 7_2:+50722824 | Msa1061380:five_prime_UTR |
| AGTTGCTGCATATGAAGCTC+AGG | 0.538905 | 7_2:+50723811 | Msa1061380:intron |
| TGTTAAGACAGCACCCAGCT+TGG | 0.540231 | 7_2:-50724790 | None:intergenic |
| GAATGTGATGCGATTGAGAT+GGG | 0.541026 | 7_2:-50722888 | None:intergenic |
| CACTGCTGCTCTTTCGTATG+CGG | 0.543539 | 7_2:+50724284 | Msa1061380:CDS |
| AGGGCTGGTTGAACTTGTGA+AGG | 0.545076 | 7_2:+50724046 | Msa1061380:CDS |
| GGCAGGACTTCATCTAGAGT+TGG | 0.547158 | 7_2:+50723832 | Msa1061380:CDS |
| GAATTGAGTAATTCTTACTT+GGG | 0.548416 | 7_2:+50723665 | Msa1061380:CDS |
| AATAGTTGGATCGTATGGTA+TGG | 0.554819 | 7_2:+50723381 | Msa1061380:intron |
| ATGCGGAGTTCCAACAAACT+AGG | 0.559941 | 7_2:+50724301 | Msa1061380:CDS |
| GCTGCATATGAAGCTCAGGC+AGG | 0.564212 | 7_2:+50723815 | Msa1061380:CDS |
| CTTACAACTGAGTTAACTGA+AGG | 0.567513 | 7_2:+50723427 | Msa1061380:CDS |
| GTGTGAATAGTTGGATCGTA+TGG | 0.567965 | 7_2:+50723376 | Msa1061380:intron |
| CCTTCAGGTTCAGTTTCAGG+TGG | 0.569024 | 7_2:-50725861 | None:intergenic |
| TGTCTACATTGTTTAGTGAG+AGG | 0.571397 | 7_2:+50723497 | Msa1061380:CDS |
| ATTGAGATGGGTTTAGAGTG+AGG | 0.574092 | 7_2:-50722876 | None:intergenic |
| AGCCACTGAACTTAAAGAGA+GGG | 0.580306 | 7_2:+50724371 | Msa1061380:CDS |
| ATAGTTGGATCGTATGGTAT+GGG | 0.580683 | 7_2:+50723382 | Msa1061380:intron |
| GGTGGTAACATGAGCATGGA+GGG | 0.581053 | 7_2:+50724411 | Msa1061380:CDS |
| GGAATGTGATGCGATTGAGA+TGG | 0.585235 | 7_2:-50722889 | None:intergenic |
| TCATTCAGATCATTCAACAC+TGG | 0.585611 | 7_2:+50723039 | Msa1061380:CDS |
| AATTCTTACTTGGGAATCAG+AGG | 0.585999 | 7_2:+50723674 | Msa1061380:CDS |
| AAGCTGTCCTAAAGCGCACA+TGG | 0.586086 | 7_2:-50724448 | None:intergenic |
| GCAGAAGTCAAGTTCGCTTG+TGG | 0.586411 | 7_2:+50724848 | Msa1061380:CDS |
| TTTGTTGCTTTGTTTAGGTG+TGG | 0.587317 | 7_2:-50722796 | None:intergenic |
| TGCTGCTGCTGCTAAACCAA+CGG | 0.589485 | 7_2:+50726719 | Msa1061380:CDS |
| ATTTCTAAGGACACGAAAAG+TGG | 0.589517 | 7_2:+50727929 | Msa1061380:three_prime_UTR |
| AAATGTTATGTACATGACAA+TGG | 0.591609 | 7_2:-50727910 | None:intergenic |
| GGCAATGTATACTTAGGAGG+TGG | 0.594830 | 7_2:+50724393 | Msa1061380:CDS |
| CAAGAAAATCGACAGAGTGA+AGG | 0.596065 | 7_2:+50727612 | Msa1061380:CDS |
| TTGTTGGTTGAAGGATTGAG+GGG | 0.601881 | 7_2:-50722936 | None:intergenic |
| TGATCTGAATGAAATGGGAG+AGG | 0.601997 | 7_2:-50723028 | None:intergenic |
| TAGGAACTTCCGTAATGCAG+AGG | 0.603233 | 7_2:+50724586 | Msa1061380:intron |
| CCAAAACATGAGAATTCCAA+AGG | 0.603872 | 7_2:+50723457 | Msa1061380:CDS |
| AACTAGGCAGAACTACTCAA+TGG | 0.607232 | 7_2:+50724317 | Msa1061380:CDS |
| AAAGCTCTCCGCATATGCGA+TGG | 0.609043 | 7_2:+50724188 | Msa1061380:CDS |
| AAGTTCGCTTGTGGTTCAAG+AGG | 0.609123 | 7_2:+50724857 | Msa1061380:CDS |
| GATCTGAATGAAATGGGAGA+GGG | 0.610164 | 7_2:-50723027 | None:intergenic |
| GAAAGTTACCATCGCATATG+CGG | 0.613391 | 7_2:-50724196 | None:intergenic |
| AGGGGCAATGTATACTTAGG+AGG | 0.615375 | 7_2:+50724390 | Msa1061380:CDS |
| GGGCTGGTTGAACTTGTGAA+GGG | 0.616284 | 7_2:+50724047 | Msa1061380:CDS |
| AGTACTAATATATCCAACAA+TGG | 0.628655 | 7_2:-50727999 | None:intergenic |
| TGATAAATGTATCGAGCTTG+TGG | 0.631446 | 7_2:+50723968 | Msa1061380:CDS |
| AGGAGGTGGTAACATGAGCA+TGG | 0.632707 | 7_2:+50724407 | Msa1061380:CDS |
| ATAGGATGATATGGCATCTG+CGG | 0.644065 | 7_2:+50723941 | Msa1061380:intron |
| CCACCTGAAACTGAACCTGA+AGG | 0.644271 | 7_2:+50725861 | Msa1061380:CDS |
| AATATGCTTTGAGACAAGCT+AGG | 0.645363 | 7_2:+50723112 | Msa1061380:CDS |
| GCCACTGAACTTAAAGAGAG+GGG | 0.649295 | 7_2:+50724372 | Msa1061380:CDS |
| GGATGATATGGCATCTGCGG+TGG | 0.650619 | 7_2:+50723944 | Msa1061380:intron |
| GAGCCACTGAACTTAAAGAG+AGG | 0.655478 | 7_2:+50724370 | Msa1061380:CDS |
| GATATAGTGGCTCTTGCAAG+CGG | 0.656754 | 7_2:+50726753 | Msa1061380:CDS |
| GGGGTTTGAGAGAAGAATGG+TGG | 0.658387 | 7_2:-50722917 | None:intergenic |
| GACAGCTTGAATCACATTTG+GGG | 0.668342 | 7_2:+50724463 | Msa1061380:CDS |
| TGAATCAATCCTAAACCTAG+GGG | 0.672583 | 7_2:+50722825 | Msa1061380:five_prime_UTR |
| AGGTGGTAACATGAGCATGG+AGG | 0.690434 | 7_2:+50724410 | Msa1061380:CDS |
| GATGCAATTGAGCAGCTCAA+CGG | 0.696835 | 7_2:+50723635 | Msa1061380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAATAACTTTTGTTTT+AGG | + | chr7_2:50724567-50724586 | Msa1061380:intron | 10.0% |
| !!! | TTTTTTCATAAATATTAAAG+AGG | + | chr7_2:50724962-50724981 | Msa1061380:intron | 10.0% |
| !!! | TTTTTCATAAATATTAAAGA+GGG | + | chr7_2:50724963-50724982 | Msa1061380:intron | 10.0% |
| !!! | TAATTTTATTAGGAAAATAT+AGG | + | chr7_2:50725078-50725097 | Msa1061380:intron | 10.0% |
| !!! | ATATTTTTACATAAAACATA+AGG | + | chr7_2:50726330-50726349 | Msa1061380:intron | 10.0% |
| !!! | TATTTTAGATATATAATCTT+TGG | + | chr7_2:50726357-50726376 | Msa1061380:intron | 10.0% |
| !!! | AAGTTAACGTTTTTTTTTTT+TGG | + | chr7_2:50723283-50723302 | Msa1061380:intron | 15.0% |
| !!! | TTTTCATTTAATTTTGTTAG+AGG | + | chr7_2:50723602-50723621 | Msa1061380:intron | 15.0% |
| !!! | TACATATTTTTTTCAAACAT+AGG | + | chr7_2:50723923-50723942 | Msa1061380:intron | 15.0% |
| !! | AAAATCTATCATAAAACAAA+TGG | - | chr7_2:50724941-50724960 | None:intergenic | 15.0% |
| !! | TGAATTGCAATAAAAATTAT+AGG | - | chr7_2:50725770-50725789 | None:intergenic | 15.0% |
| !! | ATAGATAATACATAATAAGT+GGG | - | chr7_2:50725920-50725939 | None:intergenic | 15.0% |
| !! | TATAGATAATACATAATAAG+TGG | - | chr7_2:50725921-50725940 | None:intergenic | 15.0% |
| !! | AAATCTAAAAAAATAAGTGT+TGG | - | chr7_2:50726119-50726138 | None:intergenic | 15.0% |
| !!! | TTTTCAATTTAATGATCTTT+TGG | - | chr7_2:50727144-50727163 | None:intergenic | 15.0% |
| !!! | TTTTATTCAAGAAAATTTCA+GGG | - | chr7_2:50727207-50727226 | None:intergenic | 15.0% |
| !!! | ATTTTATTCAAGAAAATTTC+AGG | - | chr7_2:50727208-50727227 | None:intergenic | 15.0% |
| !!! | AACAAATTTTAAAATGTACA+AGG | - | chr7_2:50727255-50727274 | None:intergenic | 15.0% |
| !! | TATATTAGTACTTTAATCAA+TGG | + | chr7_2:50728010-50728029 | Msa1061380:three_prime_UTR | 15.0% |
| !!! | ATTTGATCATTTTTGTAATT+AGG | + | chr7_2:50728152-50728171 | Msa1061380:three_prime_UTR | 15.0% |
| !! | TTTGAACAAAACAAACAAAA+GGG | - | chr7_2:50723202-50723221 | None:intergenic | 20.0% |
| !! | ATTTGAACAAAACAAACAAA+AGG | - | chr7_2:50723203-50723222 | None:intergenic | 20.0% |
| !!! | GTTCAAATTTAACATCTTTT+TGG | + | chr7_2:50723215-50723234 | Msa1061380:intron | 20.0% |
| !!! | ATCTTTTTGGTTTTTTAATG+AGG | + | chr7_2:50723228-50723247 | Msa1061380:intron | 20.0% |
| !! | GCAATAAATTGAAAACAAAT+AGG | - | chr7_2:50724110-50724129 | None:intergenic | 20.0% |
| !!! | TGTTTTGTAAATTGTAATGT+AGG | + | chr7_2:50724261-50724280 | Msa1061380:intron | 20.0% |
| !! | TTATTTACTAACAAGTTGTT+AGG | + | chr7_2:50724987-50725006 | Msa1061380:intron | 20.0% |
| !! | GTAAAACCATTATAAATACA+AGG | + | chr7_2:50725331-50725350 | Msa1061380:intron | 20.0% |
| !! | TATAACATTAAAACTTCTCA+TGG | + | chr7_2:50725515-50725534 | Msa1061380:intron | 20.0% |
| !! | TTGCAATAAAAATTATAGGT+GGG | - | chr7_2:50725766-50725785 | None:intergenic | 20.0% |
| !! | ATTGCAATAAAAATTATAGG+TGG | - | chr7_2:50725767-50725786 | None:intergenic | 20.0% |
| !! | ATTCAATTAGTAATTGTAAC+TGG | + | chr7_2:50725785-50725804 | Msa1061380:intron | 20.0% |
| !!! | TTTTTTATGGGTCTATTATA+CGG | + | chr7_2:50726419-50726438 | Msa1061380:intron | 20.0% |
| !!! | TTTACCATTTTTTCTACAAT+TGG | + | chr7_2:50726614-50726633 | Msa1061380:intron | 20.0% |
| !!! | TCAGTACTGAAATAAATAAA+TGG | - | chr7_2:50726662-50726681 | None:intergenic | 20.0% |
| !! | TCTCTTTCATAAATATCAAA+TGG | + | chr7_2:50726891-50726910 | Msa1061380:intron | 20.0% |
| !! | GATATATATCTTACTGTATA+TGG | + | chr7_2:50726938-50726957 | Msa1061380:intron | 20.0% |
| !! | ATTTCAAAAACCAAATTGTT+CGG | - | chr7_2:50727111-50727130 | None:intergenic | 20.0% |
| !! | TATTTAGTCGCAAAATTATA+TGG | - | chr7_2:50727303-50727322 | None:intergenic | 20.0% |
| !! | CATAAATATAATCACTGTTA+TGG | - | chr7_2:50727466-50727485 | None:intergenic | 20.0% |
| !! | TTGTAGTTAAAATGTTATGA+TGG | + | chr7_2:50727872-50727891 | Msa1061380:three_prime_UTR | 20.0% |
| !! | AAATTCAAAGTTTCAAAGTA+TGG | + | chr7_2:50728060-50728079 | Msa1061380:three_prime_UTR | 20.0% |
| ! | TTGAATGATCTGAATGAAAT+GGG | - | chr7_2:50723036-50723055 | None:intergenic | 25.0% |
| ! | TTTGAACAAAACACACAAAT+GGG | - | chr7_2:50723265-50723284 | None:intergenic | 25.0% |
| !!! | GTTTAAAGCTAACATCTTTT+TGG | + | chr7_2:50723332-50723351 | Msa1061380:intron | 25.0% |
| !!! | CTAACATCTTTTTGGTTTTT+TGG | + | chr7_2:50723340-50723359 | Msa1061380:intron | 25.0% |
| !!! | CATTTTTGAGCTAAATTTTG+TGG | + | chr7_2:50723550-50723569 | Msa1061380:intron | 25.0% |
| ! | AGAATTGAGTAATTCTTACT+TGG | + | chr7_2:50723664-50723683 | Msa1061380:CDS | 25.0% |
| ! | GAATTGAGTAATTCTTACTT+GGG | + | chr7_2:50723665-50723684 | Msa1061380:CDS | 25.0% |
| !!! | GTGTTTTTTAAGTTGTATCT+TGG | + | chr7_2:50723777-50723796 | Msa1061380:intron | 25.0% |
| !! | GTTAGTTGATGTAAATTACT+TGG | + | chr7_2:50723870-50723889 | Msa1061380:intron | 25.0% |
| ! | ACAATTGTTCTGTAAAAAAG+CGG | - | chr7_2:50723896-50723915 | None:intergenic | 25.0% |
| !! | TTTTCAAACATAGGATGATA+TGG | + | chr7_2:50723932-50723951 | Msa1061380:intron | 25.0% |
| ! | ATTTACAAAACATCAATCCA+CGG | - | chr7_2:50724253-50724272 | None:intergenic | 25.0% |
| !!! | ATTTACCAGAATGTTTTAGT+AGG | + | chr7_2:50724348-50724367 | Msa1061380:CDS | 25.0% |
| ! | TTAAATACGAACATTTCGTA+AGG | - | chr7_2:50724515-50724534 | None:intergenic | 25.0% |
| !! | TGAACTTTTAAATTGAGTTC+AGG | - | chr7_2:50724688-50724707 | None:intergenic | 25.0% |
| !! | ACTGTGTGCATAATTTTATT+AGG | + | chr7_2:50725068-50725087 | Msa1061380:intron | 25.0% |
| ! | ATTAGGAAAATATAGGAATG+TGG | + | chr7_2:50725085-50725104 | Msa1061380:intron | 25.0% |
| ! | ATCTTTAGATATTCCTCTAA+TGG | + | chr7_2:50725222-50725241 | Msa1061380:intron | 25.0% |
| !! | CATAGTTTACATTCTTTTAC+AGG | + | chr7_2:50725386-50725405 | Msa1061380:intron | 25.0% |
| ! | TGCAATAAAAATTATAGGTG+GGG | - | chr7_2:50725765-50725784 | None:intergenic | 25.0% |
| !!! | ACTATGAGTGTCTTTAATTT+TGG | + | chr7_2:50726286-50726305 | Msa1061380:intron | 25.0% |
| !!! | CTATGAGTGTCTTTAATTTT+GGG | + | chr7_2:50726287-50726306 | Msa1061380:intron | 25.0% |
| ! | TGATACCATAATGTTTATCA+TGG | + | chr7_2:50726448-50726467 | Msa1061380:intron | 25.0% |
| ! | ATAGTCCATGATAAACATTA+TGG | - | chr7_2:50726456-50726475 | None:intergenic | 25.0% |
| ! | AACCAGAGAAACATATATAT+AGG | - | chr7_2:50726524-50726543 | None:intergenic | 25.0% |
| ! | GTACTGAAATAAATAAATGG+CGG | - | chr7_2:50726659-50726678 | None:intergenic | 25.0% |
| ! | ACAGTGATCATAGATTATAA+AGG | - | chr7_2:50726797-50726816 | None:intergenic | 25.0% |
| ! | AGATATATATCGAACTATAG+TGG | - | chr7_2:50726929-50726948 | None:intergenic | 25.0% |
| ! | TATCTTACTGTATATGGTAT+AGG | + | chr7_2:50726944-50726963 | Msa1061380:intron | 25.0% |
| ! | TGAAATTTCATAGACTAAAG+TGG | - | chr7_2:50727084-50727103 | None:intergenic | 25.0% |
| ! | ACTTTAGTCTATGAAATTTC+AGG | + | chr7_2:50727083-50727102 | Msa1061380:intron | 25.0% |
| ! | CTTTAGTCTATGAAATTTCA+GGG | + | chr7_2:50727084-50727103 | Msa1061380:intron | 25.0% |
| ! | TTTAGTCTATGAAATTTCAG+GGG | + | chr7_2:50727085-50727104 | Msa1061380:intron | 25.0% |
| ! | GATCATTAAATTGAAAATCC+TGG | + | chr7_2:50727147-50727166 | Msa1061380:intron | 25.0% |
| ! | TTTGATGTTGTATAATGAAC+TGG | + | chr7_2:50727402-50727421 | Msa1061380:intron | 25.0% |
| ! | AAATGTTATGTACATGACAA+TGG | - | chr7_2:50727913-50727932 | None:intergenic | 25.0% |
| ! | TCATGTACATAACATTTCTA+AGG | + | chr7_2:50727916-50727935 | Msa1061380:three_prime_UTR | 25.0% |
| ! | AGTACTAATATATCCAACAA+TGG | - | chr7_2:50728002-50728021 | None:intergenic | 25.0% |
| !! | AGTACTTTAATCAATGGATT+AGG | + | chr7_2:50728016-50728035 | Msa1061380:three_prime_UTR | 25.0% |
| !!! | ATCACTTGTTTTTGTCTAAA+GGG | - | chr7_2:50728109-50728128 | None:intergenic | 25.0% |
| !!! | AATCACTTGTTTTTGTCTAA+AGG | - | chr7_2:50728110-50728129 | None:intergenic | 25.0% |
| !!! | TGATCATTTTTGTAATTAGG+AGG | + | chr7_2:50728155-50728174 | Msa1061380:three_prime_UTR | 25.0% |
| !!! | GATCATTTTTGTAATTAGGA+GGG | + | chr7_2:50728156-50728175 | Msa1061380:three_prime_UTR | 25.0% |
| !! | ATGAGTTTGTTGCTTTGTTT+AGG | - | chr7_2:50722804-50722823 | None:intergenic | 30.0% |
| TTTGAATCAATCCTAAACCT+AGG | + | chr7_2:50722823-50722842 | Msa1061380:five_prime_UTR | 30.0% | |
| TTGAATCAATCCTAAACCTA+GGG | + | chr7_2:50722824-50722843 | Msa1061380:five_prime_UTR | 30.0% | |
| GTTGAATGATCTGAATGAAA+TGG | - | chr7_2:50723037-50723056 | None:intergenic | 30.0% | |
| CTTTGAACAAAACACACAAA+TGG | - | chr7_2:50723266-50723285 | None:intergenic | 30.0% | |
| CTTTAAACAAAACTCGCAAA+GGG | - | chr7_2:50723320-50723339 | None:intergenic | 30.0% | |
| TTTGTTCTTGTGTGAATAGT+TGG | + | chr7_2:50723367-50723386 | Msa1061380:intron | 30.0% | |
| !!! | CTTTGGAATTCTCATGTTTT+GGG | - | chr7_2:50723459-50723478 | None:intergenic | 30.0% |
| !! | AGAGGTTATTTCTTTGAGAT+TGG | + | chr7_2:50723515-50723534 | Msa1061380:intron | 30.0% |
| ! | TTTGAGCTAAATTTTGTGGT+TGG | + | chr7_2:50723554-50723573 | Msa1061380:intron | 30.0% |
| ATACAGAACAACAAGACATT+AGG | - | chr7_2:50724749-50724768 | None:intergenic | 30.0% | |
| CAAATATGGCTCTTATGTAT+AGG | + | chr7_2:50724811-50724830 | Msa1061380:CDS | 30.0% | |
| !!! | TGTGACTTGTTTTCGATATA+AGG | + | chr7_2:50725145-50725164 | Msa1061380:intron | 30.0% |
| !!! | GTGACTTGTTTTCGATATAA+GGG | + | chr7_2:50725146-50725165 | Msa1061380:intron | 30.0% |
| CACACACCTTGTATTTATAA+TGG | - | chr7_2:50725340-50725359 | None:intergenic | 30.0% | |
| GCAATTGCATTATATATGCA+AGG | + | chr7_2:50725594-50725613 | Msa1061380:intron | 30.0% | |
| ! | AGAAATTCACCTTTTTATGG+TGG | - | chr7_2:50725655-50725674 | None:intergenic | 30.0% |
| ! | GCTAGAAATTCACCTTTTTA+TGG | - | chr7_2:50725658-50725677 | None:intergenic | 30.0% |
| TAACTGGAAAATCATTGACA+GGG | + | chr7_2:50725801-50725820 | Msa1061380:intron | 30.0% | |
| ACATAATAAGTGGGCATATA+AGG | - | chr7_2:50725911-50725930 | None:intergenic | 30.0% | |
| TAGTCTAGAAAAACAGAACA+GGG | - | chr7_2:50726249-50726268 | None:intergenic | 30.0% | |
| TTAGTCTAGAAAAACAGAAC+AGG | - | chr7_2:50726250-50726269 | None:intergenic | 30.0% | |
| !! | TGTTCTGTTTTTCTAGACTA+AGG | + | chr7_2:50726249-50726268 | Msa1061380:intron | 30.0% |
| !!! | TCTCTCAATTGCGTTTTTTA+TGG | + | chr7_2:50726406-50726425 | Msa1061380:intron | 30.0% |
| !!! | CTCTCAATTGCGTTTTTTAT+GGG | + | chr7_2:50726407-50726426 | Msa1061380:intron | 30.0% |
| TTAGATCTCTCTTGTTAGTT+AGG | + | chr7_2:50726498-50726517 | Msa1061380:intron | 30.0% | |
| ATAGCATCTCTAACTATAAC+AGG | + | chr7_2:50726575-50726594 | Msa1061380:intron | 30.0% | |
| AGCTCCAATTGTAGAAAAAA+TGG | - | chr7_2:50726621-50726640 | None:intergenic | 30.0% | |
| AAACCTAACTTTCTTTGTGT+AGG | + | chr7_2:50726681-50726700 | Msa1061380:intron | 30.0% | |
| ATATCATTTCTCTTTACCGT+TGG | - | chr7_2:50726738-50726757 | None:intergenic | 30.0% | |
| GGTAAAGAGAAATGATATAG+TGG | + | chr7_2:50726740-50726759 | Msa1061380:CDS | 30.0% | |
| CATGCATAATTATCACTCAT+CGG | - | chr7_2:50726824-50726843 | None:intergenic | 30.0% | |
| CATAAAGACATGCTTTAGTA+AGG | + | chr7_2:50727020-50727039 | Msa1061380:intron | 30.0% | |
| AATTTCATAGACTAAAGTGG+TGG | - | chr7_2:50727081-50727100 | None:intergenic | 30.0% | |
| !! | TGGATCAAGTTAGTCATTTT+GGG | + | chr7_2:50727167-50727186 | Msa1061380:intron | 30.0% |
| AGTCGCAAAATTATATGGAT+CGG | - | chr7_2:50727298-50727317 | None:intergenic | 30.0% | |
| ATAAACTATTCACTCTTCTG+TGG | + | chr7_2:50727320-50727339 | Msa1061380:intron | 30.0% | |
| AGTACTTACCTAAAAATTCC+TGG | + | chr7_2:50727359-50727378 | Msa1061380:intron | 30.0% | |
| TTATGACGTGATCAATTCTA+AGG | + | chr7_2:50727481-50727500 | Msa1061380:intron | 30.0% | |
| AGAAATTATCCGACTCTTTA+TGG | + | chr7_2:50727646-50727665 | Msa1061380:CDS | 30.0% | |
| GAAAATTAGTTCATAGTGAG+TGG | + | chr7_2:50727846-50727865 | Msa1061380:three_prime_UTR | 30.0% | |
| TGTTATGATGGCATATACTA+TGG | + | chr7_2:50727884-50727903 | Msa1061380:three_prime_UTR | 30.0% | |
| AGCAGCAGATAAATTCTTTA+TGG | + | chr7_2:50727964-50727983 | Msa1061380:three_prime_UTR | 30.0% | |
| GAAGTAGTAATATCCATTGT+TGG | + | chr7_2:50727986-50728005 | Msa1061380:three_prime_UTR | 30.0% | |
| TAAAGGGACTCAAAATAAAC+TGG | - | chr7_2:50728093-50728112 | None:intergenic | 30.0% | |
| !! | TTTGTTGCTTTGTTTAGGTG+TGG | - | chr7_2:50722799-50722818 | None:intergenic | 35.0% |
| TGAATCAATCCTAAACCTAG+GGG | + | chr7_2:50722825-50722844 | Msa1061380:five_prime_UTR | 35.0% | |
| ! | ATTGTTGGTTGAAGGATTGA+GGG | - | chr7_2:50722940-50722959 | None:intergenic | 35.0% |
| TCATTCAGATCATTCAACAC+TGG | + | chr7_2:50723039-50723058 | Msa1061380:CDS | 35.0% | |
| ! | AACAGCTAAACTTTTGTCCA+AGG | - | chr7_2:50723070-50723089 | None:intergenic | 35.0% |
| !! | TAGCTGTTGATGATGTTGTT+CGG | + | chr7_2:50723082-50723101 | Msa1061380:CDS | 35.0% |
| !! | AATATGCTTTGAGACAAGCT+AGG | + | chr7_2:50723112-50723131 | Msa1061380:CDS | 35.0% |
| ! | GCTTTAAACAAAACTCGCAA+AGG | - | chr7_2:50723321-50723340 | None:intergenic | 35.0% |
| AATAGTTGGATCGTATGGTA+TGG | + | chr7_2:50723381-50723400 | Msa1061380:intron | 35.0% | |
| ATAGTTGGATCGTATGGTAT+GGG | + | chr7_2:50723382-50723401 | Msa1061380:intron | 35.0% | |
| ! | ATCGTATGGTATGGGTTATT+TGG | + | chr7_2:50723390-50723409 | Msa1061380:CDS | 35.0% |
| CTTACAACTGAGTTAACTGA+AGG | + | chr7_2:50723427-50723446 | Msa1061380:CDS | 35.0% | |
| !!! | CCTTTGGAATTCTCATGTTT+TGG | - | chr7_2:50723460-50723479 | None:intergenic | 35.0% |
| CCAAAACATGAGAATTCCAA+AGG | + | chr7_2:50723457-50723476 | Msa1061380:CDS | 35.0% | |
| AGTAAGCAAAGCAATTCCTT+TGG | - | chr7_2:50723476-50723495 | None:intergenic | 35.0% | |
| TGTCTACATTGTTTAGTGAG+AGG | + | chr7_2:50723497-50723516 | Msa1061380:CDS | 35.0% | |
| AATTCTTACTTGGGAATCAG+AGG | + | chr7_2:50723674-50723693 | Msa1061380:CDS | 35.0% | |
| TGATAAATGTATCGAGCTTG+TGG | + | chr7_2:50723968-50723987 | Msa1061380:CDS | 35.0% | |
| ! | TGTTGTTCTGTATTTGTTGC+AGG | + | chr7_2:50724756-50724775 | Msa1061380:intron | 35.0% |
| TAGGACTGAAAATGTGAATG+TGG | + | chr7_2:50725006-50725025 | Msa1061380:intron | 35.0% | |
| AGGACTGAAAATGTGAATGT+GGG | + | chr7_2:50725007-50725026 | Msa1061380:intron | 35.0% | |
| !! | TGCTGTACCATTTTTCCTTT+TGG | - | chr7_2:50725034-50725053 | None:intergenic | 35.0% |
| TTTCGATATAAGGGAATGTG+AGG | + | chr7_2:50725155-50725174 | Msa1061380:intron | 35.0% | |
| TTCGATATAAGGGAATGTGA+GGG | + | chr7_2:50725156-50725175 | Msa1061380:intron | 35.0% | |
| ! | ATCTAGAGTTGTACCATTAG+AGG | - | chr7_2:50725238-50725257 | None:intergenic | 35.0% |
| ! | ATTCTTTTACAGGAACCTTG+TGG | + | chr7_2:50725396-50725415 | Msa1061380:intron | 35.0% |
| ! | TTCTTTTACAGGAACCTTGT+GGG | + | chr7_2:50725397-50725416 | Msa1061380:intron | 35.0% |
| TGCATTATATATGCAAGGTC+CGG | + | chr7_2:50725599-50725618 | Msa1061380:intron | 35.0% | |
| ! | TTTATGGTGGCGAATAAGTA+AGG | - | chr7_2:50725642-50725661 | None:intergenic | 35.0% |
| ACTTATTCGCCACCATAAAA+AGG | + | chr7_2:50725643-50725662 | Msa1061380:intron | 35.0% | |
| !!! | TTTTTTGTCAAGTAGCCTAG+TGG | - | chr7_2:50725680-50725699 | None:intergenic | 35.0% |
| GTAACTGGAAAATCATTGAC+AGG | + | chr7_2:50725800-50725819 | Msa1061380:intron | 35.0% | |
| GGCACAATAATATTACCTTC+AGG | - | chr7_2:50725879-50725898 | None:intergenic | 35.0% | |
| TTTATAGCAGCAGTGCATTA+TGG | + | chr7_2:50725984-50726003 | Msa1061380:intron | 35.0% | |
| TACAAACTGAGATCTCTAAG+CGG | - | chr7_2:50726017-50726036 | None:intergenic | 35.0% | |
| TTTCATCATTCCCTGACATT+TGG | + | chr7_2:50726137-50726156 | Msa1061380:intron | 35.0% | |
| TTATCTGACACCAAATGTCA+GGG | - | chr7_2:50726150-50726169 | None:intergenic | 35.0% | |
| ATTATCTGACACCAAATGTC+AGG | - | chr7_2:50726151-50726170 | None:intergenic | 35.0% | |
| !! | GACATTTGGTGTCAGATAAT+TGG | + | chr7_2:50726151-50726170 | Msa1061380:intron | 35.0% |
| AGTCTAGAAAAACAGAACAG+GGG | - | chr7_2:50726248-50726267 | None:intergenic | 35.0% | |
| GGCCTATATATATGTTTCTC+TGG | + | chr7_2:50726519-50726538 | Msa1061380:intron | 35.0% | |
| ATGGTATAGGAGAAATGCTT+AGG | + | chr7_2:50726957-50726976 | Msa1061380:intron | 35.0% | |
| AAGCATGTCTTTATGCTTGT+AGG | - | chr7_2:50727015-50727034 | None:intergenic | 35.0% | |
| AAAGACATGCTTTAGTAAGG+TGG | + | chr7_2:50727023-50727042 | Msa1061380:intron | 35.0% | |
| CAAAATGACTAACTTGATCC+AGG | - | chr7_2:50727168-50727187 | None:intergenic | 35.0% | |
| ! | CTGGATCAAGTTAGTCATTT+TGG | + | chr7_2:50727166-50727185 | Msa1061380:intron | 35.0% |
| !! | TCAAGTTAGTCATTTTGGGT+TGG | + | chr7_2:50727171-50727190 | Msa1061380:intron | 35.0% |
| GTCGCAAAATTATATGGATC+GGG | - | chr7_2:50727297-50727316 | None:intergenic | 35.0% | |
| AGGTAAGTACTACCTAACAT+AGG | - | chr7_2:50727350-50727369 | None:intergenic | 35.0% | |
| ACTTACCTAAAAATTCCTGG+TGG | + | chr7_2:50727362-50727381 | Msa1061380:intron | 35.0% | |
| ! | TTAAGCCACCAGGAATTTTT+AGG | - | chr7_2:50727370-50727389 | None:intergenic | 35.0% |
| ! | GACTAGTTGCTCAATATCAT+AGG | + | chr7_2:50727564-50727583 | Msa1061380:intron | 35.0% |
| TAGTTGCTCAATATCATAGG+TGG | + | chr7_2:50727567-50727586 | Msa1061380:intron | 35.0% | |
| AGTTGCTCAATATCATAGGT+GGG | + | chr7_2:50727568-50727587 | Msa1061380:intron | 35.0% | |
| !!! | GCTGTTTTTCCATAAAGAGT+CGG | - | chr7_2:50727658-50727677 | None:intergenic | 35.0% |
| ACTCTTTATGGAAAAACAGC+AGG | + | chr7_2:50727658-50727677 | Msa1061380:CDS | 35.0% | |
| ! | ATGTCTCTGGATGATTTTCT+AGG | + | chr7_2:50727681-50727700 | Msa1061380:CDS | 35.0% |
| ! | ATTTCTAAGGACACGAAAAG+TGG | + | chr7_2:50727929-50727948 | Msa1061380:three_prime_UTR | 35.0% |
| ! | TCTTTTCATCCCCTAGGTTT+AGG | - | chr7_2:50722837-50722856 | None:intergenic | 40.0% |
| ! | TTGAGATGGGTTTAGAGTGA+GGG | - | chr7_2:50722878-50722897 | None:intergenic | 40.0% |
| ! | ATTGAGATGGGTTTAGAGTG+AGG | - | chr7_2:50722879-50722898 | None:intergenic | 40.0% |
| GAATGTGATGCGATTGAGAT+GGG | - | chr7_2:50722891-50722910 | None:intergenic | 40.0% | |
| ! | TTGTTGGTTGAAGGATTGAG+GGG | - | chr7_2:50722939-50722958 | None:intergenic | 40.0% |
| ! | CATTGTTGGTTGAAGGATTG+AGG | - | chr7_2:50722941-50722960 | None:intergenic | 40.0% |
| ! | TGCGAAACATTGTTGGTTGA+AGG | - | chr7_2:50722948-50722967 | None:intergenic | 40.0% |
| GAAGCTATGCGAAACATTGT+TGG | - | chr7_2:50722955-50722974 | None:intergenic | 40.0% | |
| GATCTGAATGAAATGGGAGA+GGG | - | chr7_2:50723030-50723049 | None:intergenic | 40.0% | |
| TGATCTGAATGAAATGGGAG+AGG | - | chr7_2:50723031-50723050 | None:intergenic | 40.0% | |
| ! | CAGATCATTCAACACTGGTT+TGG | + | chr7_2:50723044-50723063 | Msa1061380:CDS | 40.0% |
| CAAGCTAGGTCTGAAAAATC+AGG | + | chr7_2:50723126-50723145 | Msa1061380:CDS | 40.0% | |
| ACAAAACTCGCAAAGGGTAA+TGG | - | chr7_2:50723314-50723333 | None:intergenic | 40.0% | |
| GTGTGAATAGTTGGATCGTA+TGG | + | chr7_2:50723376-50723395 | Msa1061380:intron | 40.0% | |
| ! | ACTTCATCTAGAGTTGGAAC+AGG | + | chr7_2:50723838-50723857 | Msa1061380:CDS | 40.0% |
| ATAGGATGATATGGCATCTG+CGG | + | chr7_2:50723941-50723960 | Msa1061380:intron | 40.0% | |
| TTCGTGCTAGAGCGATTAAA+GGG | + | chr7_2:50724027-50724046 | Msa1061380:CDS | 40.0% | |
| GTGAAGGGAGATATTAAGTC+AGG | + | chr7_2:50724062-50724081 | Msa1061380:CDS | 40.0% | |
| GAAAGTTACCATCGCATATG+CGG | - | chr7_2:50724199-50724218 | None:intergenic | 40.0% | |
| CGATGGTAACTTTCTTTCTG+TGG | + | chr7_2:50724205-50724224 | Msa1061380:intron | 40.0% | |
| ! | AGTAGTTCTGCCTAGTTTGT+TGG | - | chr7_2:50724314-50724333 | None:intergenic | 40.0% |
| AACTAGGCAGAACTACTCAA+TGG | + | chr7_2:50724317-50724336 | Msa1061380:CDS | 40.0% | |
| TGGCTCCTACTAAAACATTC+TGG | - | chr7_2:50724356-50724375 | None:intergenic | 40.0% | |
| AGCCACTGAACTTAAAGAGA+GGG | + | chr7_2:50724371-50724390 | Msa1061380:CDS | 40.0% | |
| AGGACAGCTTGAATCACATT+TGG | + | chr7_2:50724461-50724480 | Msa1061380:CDS | 40.0% | |
| GGACAGCTTGAATCACATTT+GGG | + | chr7_2:50724462-50724481 | Msa1061380:CDS | 40.0% | |
| GACAGCTTGAATCACATTTG+GGG | + | chr7_2:50724463-50724482 | Msa1061380:CDS | 40.0% | |
| TCAAAAGCTCCTCTGCATTA+CGG | - | chr7_2:50724598-50724617 | None:intergenic | 40.0% | |
| !! | TTTGACAAAGGCACTGACTA+AGG | + | chr7_2:50724613-50724632 | Msa1061380:CDS | 40.0% |
| ACTAAGGCAGATCAGATCTA+TGG | + | chr7_2:50724629-50724648 | Msa1061380:CDS | 40.0% | |
| ! | GGGTGCTGTCTTAACAAATA+TGG | + | chr7_2:50724797-50724816 | Msa1061380:CDS | 40.0% |
| AATGTGAATGTGGGACCAAA+AGG | + | chr7_2:50725016-50725035 | Msa1061380:intron | 40.0% | |
| TGTGGGACCAAAAGGAAAAA+TGG | + | chr7_2:50725024-50725043 | Msa1061380:intron | 40.0% | |
| AAATATAGGAATGTGGAGCG+TGG | + | chr7_2:50725092-50725111 | Msa1061380:intron | 40.0% | |
| TAATGAGTAAACACCAGCCT+AGG | - | chr7_2:50725292-50725311 | None:intergenic | 40.0% | |
| GCATTATATATGCAAGGTCC+GGG | + | chr7_2:50725600-50725619 | Msa1061380:intron | 40.0% | |
| CATTATATATGCAAGGTCCG+GGG | + | chr7_2:50725601-50725620 | Msa1061380:intron | 40.0% | |
| !! | AAGGTGAATTTCTAGCCACT+AGG | + | chr7_2:50725662-50725681 | Msa1061380:intron | 40.0% |
| ! | TTACCTTCAGGTTCAGTTTC+AGG | - | chr7_2:50725867-50725886 | None:intergenic | 40.0% |
| ! | GGTAATATTATTGTGCCGCT+TGG | + | chr7_2:50725882-50725901 | Msa1061380:intron | 40.0% |
| GATATGTACGCAATGAGTCA+AGG | + | chr7_2:50725948-50725967 | Msa1061380:intron | 40.0% | |
| AGTCACAAAAGCGACACAAA+TGG | - | chr7_2:50726094-50726113 | None:intergenic | 40.0% | |
| AAACGCAATTGAGAGATAGC+AGG | - | chr7_2:50726402-50726421 | None:intergenic | 40.0% | |
| GCACCTACACAAAGAAAGTT+AGG | - | chr7_2:50726687-50726706 | None:intergenic | 40.0% | |
| AACTATTCACTCTTCTGTGG+AGG | + | chr7_2:50727323-50727342 | Msa1061380:intron | 40.0% | |
| ACTATTCACTCTTCTGTGGA+GGG | + | chr7_2:50727324-50727343 | Msa1061380:intron | 40.0% | |
| AAAGAACTGATTAAGCCACC+AGG | - | chr7_2:50727380-50727399 | None:intergenic | 40.0% | |
| !!! | CTTCACTCTGTCGATTTTCT+TGG | - | chr7_2:50727614-50727633 | None:intergenic | 40.0% |
| CAAGAAAATCGACAGAGTGA+AGG | + | chr7_2:50727612-50727631 | Msa1061380:CDS | 40.0% | |
| CAAATACGACAATCGACAAC+TGG | - | chr7_2:50727729-50727748 | None:intergenic | 40.0% | |
| ! | TTGTCGATTGTCGTATTTGC+AGG | + | chr7_2:50727730-50727749 | Msa1061380:CDS | 40.0% |
| TATCTTGCTGCTGAAGGTTT+AGG | + | chr7_2:50727783-50727802 | Msa1061380:three_prime_UTR | 40.0% | |
| ! | CGAGTTTCTTTTCATCCCCT+AGG | - | chr7_2:50722843-50722862 | None:intergenic | 45.0% |
| GGAATGTGATGCGATTGAGA+TGG | - | chr7_2:50722892-50722911 | None:intergenic | 45.0% | |
| ! | GAGAGAAGAATGGTGGTGTT+AGG | - | chr7_2:50722913-50722932 | None:intergenic | 45.0% |
| TGAGGGGTTTGAGAGAAGAA+TGG | - | chr7_2:50722923-50722942 | None:intergenic | 45.0% | |
| GTGAGAGAAACAAGAGCTCT+TGG | - | chr7_2:50723000-50723019 | None:intergenic | 45.0% | |
| !! | ATTCAACACTGGTTTGGCCT+TGG | + | chr7_2:50723050-50723069 | Msa1061380:CDS | 45.0% |
| GATGCAATTGAGCAGCTCAA+CGG | + | chr7_2:50723635-50723654 | Msa1061380:CDS | 45.0% | |
| AGTTGCTGCATATGAAGCTC+AGG | + | chr7_2:50723811-50723830 | Msa1061380:intron | 45.0% | |
| GTTCGTGCTAGAGCGATTAA+AGG | + | chr7_2:50724026-50724045 | Msa1061380:CDS | 45.0% | |
| AGTCAGGTAGTGCTAAATGC+TGG | + | chr7_2:50724078-50724097 | Msa1061380:intron | 45.0% | |
| AAGAAAGGTTCAGCTGCAAC+AGG | - | chr7_2:50724164-50724183 | None:intergenic | 45.0% | |
| ! | CGGAGAGCTTTGTCAAAGAA+AGG | - | chr7_2:50724179-50724198 | None:intergenic | 45.0% |
| TATCAGTCATTCTTCGACCG+TGG | + | chr7_2:50724233-50724252 | Msa1061380:intron | 45.0% | |
| ATGCGGAGTTCCAACAAACT+AGG | + | chr7_2:50724301-50724320 | Msa1061380:CDS | 45.0% | |
| GAGCCACTGAACTTAAAGAG+AGG | + | chr7_2:50724370-50724389 | Msa1061380:CDS | 45.0% | |
| GCCACTGAACTTAAAGAGAG+GGG | + | chr7_2:50724372-50724391 | Msa1061380:CDS | 45.0% | |
| GAGAGGGGCAATGTATACTT+AGG | + | chr7_2:50724387-50724406 | Msa1061380:CDS | 45.0% | |
| AGGGGCAATGTATACTTAGG+AGG | + | chr7_2:50724390-50724409 | Msa1061380:CDS | 45.0% | |
| GGCAATGTATACTTAGGAGG+TGG | + | chr7_2:50724393-50724412 | Msa1061380:CDS | 45.0% | |
| ! | GCTTGAATCACATTTGGGGT+AGG | + | chr7_2:50724467-50724486 | Msa1061380:intron | 45.0% |
| !!! | GTAGGCTTCGTGGTTTTGTA+TGG | + | chr7_2:50724485-50724504 | Msa1061380:intron | 45.0% |
| TAGGAACTTCCGTAATGCAG+AGG | + | chr7_2:50724586-50724605 | Msa1061380:intron | 45.0% | |
| ! | TGCAGAGGAGCTTTTGACAA+AGG | + | chr7_2:50724601-50724620 | Msa1061380:CDS | 45.0% |
| TACTGCATTATCACTGAGCC+TGG | + | chr7_2:50724708-50724727 | Msa1061380:intron | 45.0% | |
| ATTATCACTGAGCCTGGTTG+TGG | + | chr7_2:50724714-50724733 | Msa1061380:intron | 45.0% | |
| AAGTTCGCTTGTGGTTCAAG+AGG | + | chr7_2:50724857-50724876 | Msa1061380:CDS | 45.0% | |
| CCTAGGAAGTTGCATACTCT+AGG | - | chr7_2:50725275-50725294 | None:intergenic | 45.0% | |
| CCTAGAGTATGCAACTTCCT+AGG | + | chr7_2:50725272-50725291 | Msa1061380:intron | 45.0% | |
| TTTACAGGAACCTTGTGGGT+TGG | + | chr7_2:50725401-50725420 | Msa1061380:intron | 45.0% | |
| AATTGCAAACCCTACCAGCT+GGG | - | chr7_2:50725580-50725599 | None:intergenic | 45.0% | |
| TGGCGAATAAGTAAGGAGTC+CGG | - | chr7_2:50725635-50725654 | None:intergenic | 45.0% | |
| ! | GTGGGGCATCAAAAAAAGCA+TGG | - | chr7_2:50725748-50725767 | None:intergenic | 45.0% |
| GGGCATATAAGGTAACCAAG+CGG | - | chr7_2:50725900-50725919 | None:intergenic | 45.0% | |
| TAGCAGCAGTGCATTATGGT+TGG | + | chr7_2:50725988-50726007 | Msa1061380:intron | 45.0% | |
| CAAATGGCCACAAATGGACA+TGG | - | chr7_2:50726078-50726097 | None:intergenic | 45.0% | |
| AGAGATAGCAGGTGATGAGA+GGG | - | chr7_2:50726391-50726410 | None:intergenic | 45.0% | |
| GATATAGTGGCTCTTGCAAG+CGG | + | chr7_2:50726753-50726772 | Msa1061380:CDS | 45.0% | |
| ATTTCAGGGGCCGAACAATT+TGG | + | chr7_2:50727098-50727117 | Msa1061380:intron | 45.0% | |
| GAAAAACAGCAGGATGTCTC+TGG | + | chr7_2:50727668-50727687 | Msa1061380:CDS | 45.0% | |
| GCAAGATAAGCAGCAGAAGA+TGG | - | chr7_2:50727771-50727790 | None:intergenic | 45.0% | |
| GACACGAAAAGTGGTGACTA+TGG | + | chr7_2:50727938-50727957 | Msa1061380:three_prime_UTR | 45.0% | |
| !!! | ATTTTTTTTTTATCAAAATT+TGG | + | chr7_2:50723164-50723183 | Msa1061380:intron | 5.0% |
| !!! | TTTTTTTTTTATCAAAATTT+GGG | + | chr7_2:50723165-50723184 | Msa1061380:intron | 5.0% |
| GGGGTTTGAGAGAAGAATGG+TGG | - | chr7_2:50722920-50722939 | None:intergenic | 50.0% | |
| ! | GGCAGGACTTCATCTAGAGT+TGG | + | chr7_2:50723832-50723851 | Msa1061380:CDS | 50.0% |
| TGCTAGAGCGATTAAAGGGC+TGG | + | chr7_2:50724031-50724050 | Msa1061380:CDS | 50.0% | |
| !! | AGGGCTGGTTGAACTTGTGA+AGG | + | chr7_2:50724046-50724065 | Msa1061380:CDS | 50.0% |
| !! | GGGCTGGTTGAACTTGTGAA+GGG | + | chr7_2:50724047-50724066 | Msa1061380:CDS | 50.0% |
| AAAGCTCTCCGCATATGCGA+TGG | + | chr7_2:50724188-50724207 | Msa1061380:CDS | 50.0% | |
| CACTGCTGCTCTTTCGTATG+CGG | + | chr7_2:50724284-50724303 | Msa1061380:CDS | 50.0% | |
| ! | GCCCCTCTCTTTAAGTTCAG+TGG | - | chr7_2:50724376-50724395 | None:intergenic | 50.0% |
| AGGAGGTGGTAACATGAGCA+TGG | + | chr7_2:50724407-50724426 | Msa1061380:CDS | 50.0% | |
| AGGTGGTAACATGAGCATGG+AGG | + | chr7_2:50724410-50724429 | Msa1061380:CDS | 50.0% | |
| GGTGGTAACATGAGCATGGA+GGG | + | chr7_2:50724411-50724430 | Msa1061380:CDS | 50.0% | |
| ATGCAAGCCATGTGCGCTTT+AGG | + | chr7_2:50724441-50724460 | Msa1061380:CDS | 50.0% | |
| AAGCTGTCCTAAAGCGCACA+TGG | - | chr7_2:50724451-50724470 | None:intergenic | 50.0% | |
| AGGAACAGTATGCCACAACC+AGG | - | chr7_2:50724729-50724748 | None:intergenic | 50.0% | |
| AGGCGAAAAACATCCCAAGC+TGG | + | chr7_2:50724776-50724795 | Msa1061380:intron | 50.0% | |
| GGCGAAAAACATCCCAAGCT+GGG | + | chr7_2:50724777-50724796 | Msa1061380:intron | 50.0% | |
| GTTAAGACAGCACCCAGCTT+GGG | - | chr7_2:50724792-50724811 | None:intergenic | 50.0% | |
| TGTTAAGACAGCACCCAGCT+TGG | - | chr7_2:50724793-50724812 | None:intergenic | 50.0% | |
| GCAGAAGTCAAGTTCGCTTG+TGG | + | chr7_2:50724848-50724867 | Msa1061380:CDS | 50.0% | |
| !! | TTATGCACACAGTGCCGCTT+GGG | - | chr7_2:50725061-50725080 | None:intergenic | 50.0% |
| ! | ATTATGCACACAGTGCCGCT+TGG | - | chr7_2:50725062-50725081 | None:intergenic | 50.0% |
| GAGTATGCAACTTCCTAGGC+TGG | + | chr7_2:50725276-50725295 | Msa1061380:intron | 50.0% | |
| !! | CTCTGAGGAGCTTTGGCTTT+GGG | + | chr7_2:50725445-50725464 | Msa1061380:intron | 50.0% |
| !! | TCTGAGGAGCTTTGGCTTTG+GGG | + | chr7_2:50725446-50725465 | Msa1061380:intron | 50.0% |
| !! | TTTGGCTTTGGGGGGCTATA+GGG | + | chr7_2:50725456-50725475 | Msa1061380:intron | 50.0% |
| CAATTGCAAACCCTACCAGC+TGG | - | chr7_2:50725581-50725600 | None:intergenic | 50.0% | |
| GGCGAATAAGTAAGGAGTCC+GGG | - | chr7_2:50725634-50725653 | None:intergenic | 50.0% | |
| ! | TCAGGTTCAGTTTCAGGTGG+TGG | - | chr7_2:50725861-50725880 | None:intergenic | 50.0% |
| ! | CCTTCAGGTTCAGTTTCAGG+TGG | - | chr7_2:50725864-50725883 | None:intergenic | 50.0% |
| CCACCTGAAACTGAACCTGA+AGG | + | chr7_2:50725861-50725880 | Msa1061380:CDS | 50.0% | |
| CAGCAGTGCATTATGGTTGG+TGG | + | chr7_2:50725991-50726010 | Msa1061380:intron | 50.0% | |
| AGAACGCTATTGCACTGTGC+TGG | + | chr7_2:50726036-50726055 | Msa1061380:intron | 50.0% | |
| GCCACAACCATGTCCATTTG+TGG | + | chr7_2:50726068-50726087 | Msa1061380:intron | 50.0% | |
| GCCACAAATGGACATGGTTG+TGG | - | chr7_2:50726072-50726091 | None:intergenic | 50.0% | |
| GCGACACAAATGGCCACAAA+TGG | - | chr7_2:50726084-50726103 | None:intergenic | 50.0% | |
| GTGTGTGTGTGTGTCTGTTG+GGG | - | chr7_2:50726190-50726209 | None:intergenic | 50.0% | |
| CGTGTGTGTGTGTGTCTGTT+GGG | - | chr7_2:50726191-50726210 | None:intergenic | 50.0% | |
| GAGAGATAGCAGGTGATGAG+AGG | - | chr7_2:50726392-50726411 | None:intergenic | 50.0% | |
| TGCTGCTGCTGCTAAACCAA+CGG | + | chr7_2:50726719-50726738 | Msa1061380:CDS | 50.0% | |
| TTCTGTGGAGGGCCTATGTT+AGG | + | chr7_2:50727335-50727354 | Msa1061380:intron | 50.0% | |
| GCTGCTTATCTTGCTGCTGA+AGG | + | chr7_2:50727777-50727796 | Msa1061380:three_prime_UTR | 50.0% | |
| GCTGCATATGAAGCTCAGGC+AGG | + | chr7_2:50723815-50723834 | Msa1061380:CDS | 55.0% | |
| GGATGATATGGCATCTGCGG+TGG | + | chr7_2:50723944-50723963 | Msa1061380:intron | 55.0% | |
| ! | CACATTTGGGGTAGGCTTCG+TGG | + | chr7_2:50724475-50724494 | Msa1061380:intron | 55.0% |
| TGGTACAGCAGTTGCCCAAG+CGG | + | chr7_2:50725044-50725063 | Msa1061380:intron | 55.0% | |
| ! | GTGGAATGCGACTTGGCAGA+GGG | + | chr7_2:50725111-50725130 | Msa1061380:intron | 55.0% |
| ! | TGGAATGCGACTTGGCAGAG+GGG | + | chr7_2:50725112-50725131 | Msa1061380:intron | 55.0% |
| CTCTCTCTGACCAACCCACA+AGG | - | chr7_2:50725414-50725433 | None:intergenic | 55.0% | |
| !! | CTTGTGGGTTGGTCAGAGAG+AGG | + | chr7_2:50725412-50725431 | Msa1061380:intron | 55.0% |
| AGAGGAAAGCCTCTCCTCTG+AGG | + | chr7_2:50725430-50725449 | Msa1061380:intron | 55.0% | |
| CCAAAGCCAAAGCTCCTCAG+AGG | - | chr7_2:50725447-50725466 | None:intergenic | 55.0% | |
| ! | CCTCTGAGGAGCTTTGGCTT+TGG | + | chr7_2:50725444-50725463 | Msa1061380:intron | 55.0% |
| !! | CTGAGGAGCTTTGGCTTTGG+GGG | + | chr7_2:50725447-50725466 | Msa1061380:intron | 55.0% |
| !! | TGAGGAGCTTTGGCTTTGGG+GGG | + | chr7_2:50725448-50725467 | Msa1061380:intron | 55.0% |
| !! | CTTTGGCTTTGGGGGGCTAT+AGG | + | chr7_2:50725455-50725474 | Msa1061380:intron | 55.0% |
| !! | TTGGCTTTGGGGGGCTATAG+GGG | + | chr7_2:50725457-50725476 | Msa1061380:intron | 55.0% |
| TGAGCTTAGCCCAGCTGGTA+GGG | + | chr7_2:50725568-50725587 | Msa1061380:intron | 55.0% | |
| GTGTGTGTCTGTTGGGGTTG+AGG | - | chr7_2:50726184-50726203 | None:intergenic | 55.0% | |
| GCGTGTGTGTGTGTGTCTGT+TGG | - | chr7_2:50726192-50726211 | None:intergenic | 55.0% | |
| GTGGAGCGTGGAATGCGACT+TGG | + | chr7_2:50725104-50725123 | Msa1061380:intron | 60.0% | |
| ! | CGTGGAATGCGACTTGGCAG+AGG | + | chr7_2:50725110-50725129 | Msa1061380:intron | 60.0% |
| ! | GGAATGCGACTTGGCAGAGG+GGG | + | chr7_2:50725113-50725132 | Msa1061380:intron | 60.0% |
| ! | GCCTCTCCTCTGAGGAGCTT+TGG | + | chr7_2:50725438-50725457 | Msa1061380:intron | 60.0% |
| GCCAAAGCTCCTCAGAGGAG+AGG | - | chr7_2:50725442-50725461 | None:intergenic | 60.0% | |
| CCAGCTGGGCTAAGCTCACA+GGG | - | chr7_2:50725566-50725585 | None:intergenic | 60.0% | |
| ACCAGCTGGGCTAAGCTCAC+AGG | - | chr7_2:50725567-50725586 | None:intergenic | 60.0% | |
| GTGAGCTTAGCCCAGCTGGT+AGG | + | chr7_2:50725567-50725586 | Msa1061380:intron | 60.0% | |
| AAGGTCCGGGGTTCGAATCC+CGG | + | chr7_2:50725613-50725632 | Msa1061380:intron | 60.0% | |
| CCCTGTGAGCTTAGCCCAGC+TGG | + | chr7_2:50725563-50725582 | Msa1061380:intron | 65.0% | |
| GGAGTCCGGGATTCGAACCC+CGG | - | chr7_2:50725621-50725640 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 50722787 | 50728210 | 50722787 | ID=Msa1061380;Name=Msa1061380 |
| chr7_2 | mRNA | 50722787 | 50728210 | 50722787 | ID=Msa1061380-mRNA-1;Parent=Msa1061380;Name=Msa1061380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=171|1|1|1|1|1|12|449|431 |
| chr7_2 | exon | 50722787 | 50723147 | 50722787 | ID=Msa1061380-mRNA-1:exon:9180;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50723386 | 50723518 | 50723386 | ID=Msa1061380-mRNA-1:exon:9181;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50723622 | 50723695 | 50723622 | ID=Msa1061380-mRNA-1:exon:9182;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50723813 | 50723859 | 50723813 | ID=Msa1061380-mRNA-1:exon:9183;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50723945 | 50724083 | 50723945 | ID=Msa1061380-mRNA-1:exon:9184;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50724171 | 50724209 | 50724171 | ID=Msa1061380-mRNA-1:exon:9185;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50724283 | 50724484 | 50724283 | ID=Msa1061380-mRNA-1:exon:9186;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50724589 | 50724650 | 50724589 | ID=Msa1061380-mRNA-1:exon:9187;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50724778 | 50724878 | 50724778 | ID=Msa1061380-mRNA-1:exon:9188;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50725822 | 50725882 | 50725822 | ID=Msa1061380-mRNA-1:exon:9189;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50726703 | 50726774 | 50726703 | ID=Msa1061380-mRNA-1:exon:9190;Parent=Msa1061380-mRNA-1 |
| chr7_2 | exon | 50727586 | 50728210 | 50727586 | ID=Msa1061380-mRNA-1:exon:9191;Parent=Msa1061380-mRNA-1 |
| chr7_2 | five_prime_UTR | 50722787 | 50722957 | 50722787 | ID=Msa1061380-mRNA-1:five_prime_utr;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50722958 | 50723147 | 50722958 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50723386 | 50723518 | 50723386 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50723622 | 50723695 | 50723622 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50723813 | 50723859 | 50723813 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50723945 | 50724083 | 50723945 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50724171 | 50724209 | 50724171 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50724283 | 50724484 | 50724283 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50724589 | 50724650 | 50724589 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50724778 | 50724878 | 50724778 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50725822 | 50725882 | 50725822 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50726703 | 50726774 | 50726703 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | CDS | 50727586 | 50727761 | 50727586 | ID=Msa1061380-mRNA-1:cds;Parent=Msa1061380-mRNA-1 |
| chr7_2 | three_prime_UTR | 50727762 | 50728210 | 50727762 | ID=Msa1061380-mRNA-1:three_prime_utr;Parent=Msa1061380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
