Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062050 | XP_003623174.1 | 93.750 | 224 | 14 | 0 | 1 | 224 | 1 | 224 | 1.05e-150 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062050 | sp|P32110|GSTX6_SOYBN | 71.556 | 225 | 63 | 1 | 1 | 224 | 1 | 225 | 6.87e-115 | 330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062050 | B7FN12 | 93.750 | 224 | 14 | 0 | 1 | 224 | 1 | 224 | 5.01e-151 | 428 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1062050 | Msa1107210 | 0.858072 | 1.058551e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062050 | MtrunA17_Chr7g0240551 | 93.750 | 224 | 14 | 0 | 1 | 224 | 1 | 224 | 9.66e-155 | 428 |
| Msa1062050 | MtrunA17_Chr7g0240531 | 89.286 | 224 | 24 | 0 | 1 | 224 | 1 | 224 | 5.75e-146 | 405 |
| Msa1062050 | MtrunA17_Chr7g0240541 | 84.375 | 224 | 35 | 0 | 1 | 224 | 1 | 224 | 4.05e-140 | 391 |
| Msa1062050 | MtrunA17_Chr7g0240581 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 6.22e-134 | 375 |
| Msa1062050 | MtrunA17_Chr7g0240561 | 78.571 | 224 | 48 | 0 | 1 | 224 | 1 | 224 | 5.09e-130 | 365 |
| Msa1062050 | MtrunA17_Chr7g0240511 | 79.911 | 224 | 40 | 1 | 1 | 224 | 1 | 219 | 2.63e-127 | 358 |
| Msa1062050 | MtrunA17_Chr7g0240521 | 76.000 | 225 | 53 | 1 | 1 | 224 | 8 | 232 | 2.65e-115 | 328 |
| Msa1062050 | MtrunA17_Chr7g0240631 | 68.161 | 223 | 71 | 0 | 1 | 223 | 1 | 223 | 1.17e-114 | 327 |
| Msa1062050 | MtrunA17_Chr7g0240681 | 69.778 | 225 | 67 | 1 | 1 | 224 | 1 | 225 | 1.16e-113 | 324 |
| Msa1062050 | MtrunA17_Chr7g0240641 | 67.713 | 223 | 72 | 0 | 1 | 223 | 1 | 223 | 1.26e-112 | 321 |
| Msa1062050 | MtrunA17_Chr7g0240611 | 68.037 | 219 | 66 | 1 | 1 | 219 | 1 | 215 | 4.16e-107 | 307 |
| Msa1062050 | MtrunA17_Chr4g0008791 | 63.014 | 219 | 81 | 0 | 1 | 219 | 1 | 219 | 4.51e-103 | 297 |
| Msa1062050 | MtrunA17_Chr7g0240691 | 64.651 | 215 | 75 | 1 | 6 | 219 | 36 | 250 | 4.68e-101 | 293 |
| Msa1062050 | MtrunA17_Chr7g0240671 | 64.734 | 207 | 69 | 1 | 8 | 214 | 5 | 207 | 4.91e-96 | 279 |
| Msa1062050 | MtrunA17_Chr4g0008781 | 60.280 | 214 | 83 | 2 | 3 | 215 | 4 | 216 | 1.17e-93 | 273 |
| Msa1062050 | MtrunA17_Chr7g0240651 | 64.384 | 219 | 74 | 1 | 1 | 219 | 1 | 215 | 3.56e-90 | 264 |
| Msa1062050 | MtrunA17_Chr7g0240661 | 64.486 | 214 | 72 | 1 | 1 | 214 | 1 | 210 | 4.58e-88 | 259 |
| Msa1062050 | MtrunA17_Chr6g0483141 | 48.077 | 208 | 106 | 2 | 7 | 213 | 3 | 209 | 1.15e-65 | 202 |
| Msa1062050 | MtrunA17_Chr1g0196771 | 46.262 | 214 | 110 | 2 | 6 | 216 | 2 | 213 | 1.05e-62 | 195 |
| Msa1062050 | MtrunA17_Chr3g0132581 | 47.867 | 211 | 108 | 2 | 6 | 215 | 4 | 213 | 5.93e-61 | 190 |
| Msa1062050 | MtrunA17_Chr8g0379581 | 42.727 | 220 | 124 | 2 | 4 | 222 | 2 | 220 | 2.11e-60 | 189 |
| Msa1062050 | MtrunA17_Chr1g0212301 | 43.636 | 220 | 117 | 3 | 7 | 221 | 3 | 220 | 1.14e-56 | 179 |
| Msa1062050 | MtrunA17_Chr5g0417011 | 42.342 | 222 | 120 | 3 | 1 | 215 | 1 | 221 | 2.01e-55 | 176 |
| Msa1062050 | MtrunA17_Chr8g0379561 | 42.081 | 221 | 125 | 3 | 1 | 220 | 1 | 219 | 2.72e-55 | 176 |
| Msa1062050 | MtrunA17_Chr1g0196691 | 41.441 | 222 | 123 | 3 | 7 | 223 | 28 | 247 | 9.87e-53 | 170 |
| Msa1062050 | MtrunA17_Chr1g0196661 | 42.105 | 209 | 117 | 2 | 7 | 212 | 3 | 210 | 1.83e-52 | 169 |
| Msa1062050 | MtrunA17_Chr4g0029341 | 41.121 | 214 | 120 | 3 | 6 | 215 | 3 | 214 | 4.99e-51 | 165 |
| Msa1062050 | MtrunA17_Chr1g0196711 | 41.429 | 210 | 119 | 2 | 7 | 213 | 3 | 211 | 8.77e-51 | 164 |
| Msa1062050 | MtrunA17_Chr1g0196721 | 41.121 | 214 | 122 | 2 | 8 | 218 | 3 | 215 | 1.65e-50 | 163 |
| Msa1062050 | MtrunA17_Chr5g0415411 | 42.152 | 223 | 119 | 3 | 1 | 215 | 1 | 221 | 3.29e-50 | 163 |
| Msa1062050 | MtrunA17_Chr8g0363751 | 42.466 | 219 | 118 | 3 | 5 | 215 | 3 | 221 | 2.06e-49 | 161 |
| Msa1062050 | MtrunA17_Chr2g0312731 | 40.777 | 206 | 117 | 5 | 6 | 209 | 3 | 205 | 4.21e-44 | 147 |
| Msa1062050 | MtrunA17_Chr2g0312771 | 39.713 | 209 | 121 | 5 | 6 | 212 | 3 | 208 | 3.90e-43 | 144 |
| Msa1062050 | MtrunA17_Chr3g0107731 | 41.063 | 207 | 117 | 5 | 16 | 220 | 18 | 221 | 1.30e-42 | 143 |
| Msa1062050 | MtrunA17_Chr2g0312751 | 39.234 | 209 | 122 | 5 | 6 | 212 | 3 | 208 | 1.52e-42 | 143 |
| Msa1062050 | MtrunA17_Chr2g0312811 | 40.566 | 212 | 117 | 7 | 6 | 212 | 3 | 210 | 3.44e-40 | 137 |
| Msa1062050 | MtrunA17_Chr8g0357241 | 39.423 | 208 | 118 | 5 | 16 | 218 | 13 | 217 | 1.09e-39 | 135 |
| Msa1062050 | MtrunA17_Chr2g0312791 | 40.686 | 204 | 117 | 4 | 6 | 207 | 3 | 204 | 1.24e-39 | 135 |
| Msa1062050 | MtrunA17_Chr3g0107741 | 37.443 | 219 | 132 | 5 | 4 | 220 | 6 | 221 | 1.70e-39 | 135 |
| Msa1062050 | MtrunA17_Chr2g0312781 | 37.441 | 211 | 127 | 5 | 1 | 209 | 15 | 222 | 2.30e-39 | 135 |
| Msa1062050 | MtrunA17_Chr8g0357211 | 38.942 | 208 | 119 | 5 | 16 | 218 | 13 | 217 | 3.13e-39 | 134 |
| Msa1062050 | MtrunA17_Chr4g0069471 | 45.109 | 184 | 93 | 5 | 6 | 186 | 24 | 202 | 1.12e-38 | 132 |
| Msa1062050 | MtrunA17_Chr2g0312721 | 35.455 | 220 | 137 | 4 | 6 | 223 | 3 | 219 | 9.06e-38 | 130 |
| Msa1062050 | MtrunA17_Chr5g0433801 | 36.792 | 212 | 129 | 4 | 3 | 212 | 2 | 210 | 5.28e-37 | 129 |
| Msa1062050 | MtrunA17_Chr8g0391631 | 45.806 | 155 | 76 | 3 | 7 | 153 | 21 | 175 | 3.77e-36 | 125 |
| Msa1062050 | MtrunA17_Chr2g0312681 | 35.577 | 208 | 129 | 4 | 7 | 212 | 4 | 208 | 8.43e-33 | 118 |
| Msa1062050 | MtrunA17_Chr2g0312691 | 36.538 | 208 | 127 | 4 | 7 | 212 | 4 | 208 | 1.15e-32 | 117 |
| Msa1062050 | MtrunA17_Chr2g0312711 | 37.696 | 191 | 113 | 4 | 16 | 204 | 13 | 199 | 1.42e-27 | 104 |
| Msa1062050 | MtrunA17_Chr2g0313561 | 48.276 | 58 | 29 | 1 | 51 | 107 | 2 | 59 | 5.45e-14 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062050 | AT3G09270.1 | 54.091 | 220 | 97 | 4 | 3 | 219 | 2 | 220 | 3.22e-76 | 229 |
| Msa1062050 | AT2G29420.1 | 47.005 | 217 | 113 | 2 | 3 | 218 | 5 | 220 | 1.75e-70 | 215 |
| Msa1062050 | AT2G29490.1 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 2.56e-60 | 189 |
| Msa1062050 | AT2G29480.1 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 7.13e-58 | 183 |
| Msa1062050 | AT2G29450.1 | 46.377 | 207 | 109 | 2 | 3 | 207 | 2 | 208 | 2.05e-57 | 181 |
| Msa1062050 | AT2G29460.1 | 44.091 | 220 | 120 | 3 | 1 | 218 | 1 | 219 | 1.30e-54 | 174 |
| Msa1062050 | AT2G29440.1 | 44.498 | 209 | 112 | 4 | 1 | 207 | 1 | 207 | 4.56e-52 | 168 |
| Msa1062050 | AT2G29470.1 | 43.810 | 210 | 114 | 4 | 1 | 207 | 1 | 209 | 1.94e-51 | 166 |
| Msa1062050 | AT1G10370.1 | 43.304 | 224 | 112 | 5 | 1 | 214 | 1 | 219 | 7.55e-51 | 165 |
| Msa1062050 | AT1G69930.1 | 37.500 | 224 | 134 | 2 | 2 | 219 | 7 | 230 | 2.51e-49 | 161 |
| Msa1062050 | AT1G27130.1 | 39.556 | 225 | 127 | 4 | 1 | 217 | 1 | 224 | 1.15e-48 | 159 |
| Msa1062050 | AT1G59670.1 | 42.130 | 216 | 117 | 3 | 5 | 212 | 4 | 219 | 2.70e-48 | 159 |
| Msa1062050 | AT1G59700.1 | 41.743 | 218 | 119 | 3 | 5 | 214 | 4 | 221 | 1.33e-46 | 154 |
| Msa1062050 | AT5G62480.1 | 40.367 | 218 | 119 | 4 | 8 | 215 | 9 | 225 | 9.16e-46 | 152 |
| Msa1062050 | AT1G27140.1 | 37.826 | 230 | 133 | 4 | 1 | 221 | 1 | 229 | 2.85e-44 | 149 |
| Msa1062050 | AT1G10360.1 | 37.500 | 216 | 128 | 2 | 6 | 214 | 4 | 219 | 3.73e-44 | 148 |
| Msa1062050 | AT1G74590.1 | 36.239 | 218 | 132 | 3 | 1 | 212 | 1 | 217 | 2.52e-43 | 145 |
| Msa1062050 | AT1G78340.1 | 42.791 | 215 | 115 | 6 | 6 | 216 | 3 | 213 | 8.97e-43 | 144 |
| Msa1062050 | AT1G78370.1 | 39.614 | 207 | 119 | 6 | 16 | 220 | 13 | 215 | 2.77e-42 | 142 |
| Msa1062050 | AT1G78380.1 | 40.385 | 208 | 119 | 4 | 7 | 212 | 4 | 208 | 7.17e-42 | 142 |
| Msa1062050 | AT1G69920.1 | 37.281 | 228 | 133 | 4 | 1 | 218 | 26 | 253 | 9.78e-42 | 142 |
| Msa1062050 | AT1G78320.1 | 40.097 | 207 | 119 | 4 | 6 | 210 | 3 | 206 | 3.71e-41 | 140 |
| Msa1062050 | AT1G17170.1 | 40.845 | 213 | 120 | 6 | 6 | 216 | 3 | 211 | 5.02e-41 | 139 |
| Msa1062050 | AT1G53680.1 | 38.679 | 212 | 125 | 4 | 1 | 209 | 1 | 210 | 1.33e-39 | 136 |
| Msa1062050 | AT1G17180.1 | 39.234 | 209 | 122 | 5 | 6 | 212 | 3 | 208 | 4.86e-39 | 134 |
| Msa1062050 | AT1G78360.1 | 40.191 | 209 | 119 | 6 | 7 | 212 | 4 | 209 | 3.40e-36 | 127 |
| Msa1062050 | AT1G17190.1 | 42.135 | 178 | 98 | 5 | 16 | 191 | 14 | 188 | 8.68e-35 | 123 |
| Msa1062050 | AT3G43800.1 | 37.198 | 207 | 121 | 6 | 4 | 204 | 2 | 205 | 7.13e-34 | 121 |
| Msa1062050 | AT5G62480.2 | 31.797 | 217 | 113 | 4 | 8 | 215 | 9 | 199 | 4.68e-28 | 106 |
| Msa1062050 | AT5G62480.3 | 31.797 | 217 | 112 | 4 | 8 | 215 | 9 | 198 | 9.72e-28 | 105 |
| Msa1062050 | AT1G78320.2 | 32.524 | 206 | 109 | 4 | 6 | 210 | 3 | 179 | 1.76e-24 | 96.3 |
| Msa1062050 | AT2G02380.1 | 27.442 | 215 | 137 | 6 | 5 | 207 | 9 | 216 | 3.79e-15 | 72.0 |
| Msa1062050 | AT2G02390.1 | 27.149 | 221 | 134 | 6 | 3 | 207 | 4 | 213 | 9.67e-13 | 65.5 |
| Msa1062050 | AT2G02390.3 | 26.754 | 228 | 133 | 7 | 3 | 207 | 4 | 220 | 6.99e-12 | 63.2 |
| Msa1062050 | AT2G02390.2 | 35.714 | 98 | 59 | 2 | 3 | 97 | 4 | 100 | 6.61e-11 | 59.7 |
Find 54 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGACTCGTTTC+TGG | 0.137920 | 7_2:+52549488 | Msa1062050:CDS |
| CTCCTTGGATAATAAATTAT+TGG | 0.190682 | 7_2:+52551961 | Msa1062050:three_prime_UTR |
| GCTCGTTATGAAAGTCATTT+TGG | 0.207854 | 7_2:+52551815 | Msa1062050:CDS |
| GCTCTACGATGGCATCAAAT+AGG | 0.260080 | 7_2:+52549203 | Msa1062050:exon |
| GGATAATAAATTATTGGATT+TGG | 0.260089 | 7_2:+52551967 | Msa1062050:three_prime_UTR |
| ATATGTACTTGTGAGATTTA+AGG | 0.269889 | 7_2:+52551862 | Msa1062050:three_prime_UTR |
| AATCACAAGTGACTCTGATA+TGG | 0.278115 | 7_2:-52549407 | None:intergenic |
| CCAAATGCTTCTTGTATAAC+AGG | 0.284363 | 7_2:-52551671 | None:intergenic |
| GAGCTCAAAGACAATTTCTT+TGG | 0.287056 | 7_2:+52551593 | Msa1062050:CDS |
| TTGGGTGATTGTTGAATTCT+TGG | 0.291920 | 7_2:-52551742 | None:intergenic |
| ATTATCCAAGGAGAAATCTT+AGG | 0.294121 | 7_2:-52551951 | None:intergenic |
| ACAGGAACTTTCTTGTAAAC+AGG | 0.303772 | 7_2:-52549364 | None:intergenic |
| AGGAATAGTTCTCACATTAT+AGG | 0.312748 | 7_2:+52549013 | None:intergenic |
| TGGCTCCAAATGTAAAGCTT+TGG | 0.348494 | 7_2:-52551722 | None:intergenic |
| ATCTCCACTCTTGTTACAAA+TGG | 0.364739 | 7_2:-52549259 | None:intergenic |
| TAAGGATCAGAAGGTAAGAT+TGG | 0.370607 | 7_2:-52549463 | None:intergenic |
| AATTTCCAAAGCTTTACATT+TGG | 0.388847 | 7_2:+52551717 | Msa1062050:CDS |
| CCTGTTATACAAGAAGCATT+TGG | 0.389924 | 7_2:+52551671 | Msa1062050:CDS |
| GTTCAAAATAGATCAACTTA+AGG | 0.392026 | 7_2:+52551837 | Msa1062050:exon |
| TTCTTTGGTGGGGAGGAGAT+TGG | 0.394489 | 7_2:+52551608 | Msa1062050:CDS |
| TTCATAACGAGCTTTGTAGA+AGG | 0.410089 | 7_2:-52551804 | None:intergenic |
| TATATATAAAAGTAAATCAT+AGG | 0.414169 | 7_2:+52549132 | Msa1062050:five_prime_UTR |
| GCCTCCTAGAGAGACCCTTT+TGG | 0.431280 | 7_2:+52551781 | Msa1062050:CDS |
| CTCTACGATGGCATCAAATA+GGG | 0.433000 | 7_2:+52549204 | Msa1062050:exon |
| CTCAAAGACAATTTCTTTGG+TGG | 0.447184 | 7_2:+52551596 | Msa1062050:CDS |
| ATCAAATAGGGAAGAGGTAA+AGG | 0.451305 | 7_2:+52549216 | Msa1062050:CDS |
| TACCTTGTCATCTATGAACT+TGG | 0.462042 | 7_2:-52549512 | None:intergenic |
| ATCCAATAATTTATTATCCA+AGG | 0.481656 | 7_2:-52551963 | None:intergenic |
| TCTCCACTCTTGTTACAAAT+GGG | 0.486382 | 7_2:-52549258 | None:intergenic |
| GAGCTTTGTAGAAGGCCAAA+AGG | 0.488923 | 7_2:-52551796 | None:intergenic |
| ATCACAAGTGACTCTGATAT+GGG | 0.492785 | 7_2:-52549406 | None:intergenic |
| TCAAAGACAATTTCTTTGGT+GGG | 0.500911 | 7_2:+52551597 | Msa1062050:CDS |
| AATATGAGCAAGAAAAGGTT+GGG | 0.503590 | 7_2:+52549311 | Msa1062050:CDS |
| CAAAGACAATTTCTTTGGTG+GGG | 0.503596 | 7_2:+52551598 | Msa1062050:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7_2:+52549431 | Msa1062050:CDS |
| CAGGAACTTTCTTGTAAACA+GGG | 0.506672 | 7_2:-52549363 | None:intergenic |
| AAATATGAGCAAGAAAAGGT+TGG | 0.516900 | 7_2:+52549310 | Msa1062050:CDS |
| AGAACGTGAGAAGAGTATTG+AGG | 0.526929 | 7_2:+52551538 | Msa1062050:CDS |
| TGCAACCTAAGATTTCTCCT+TGG | 0.545237 | 7_2:+52551946 | Msa1062050:three_prime_UTR |
| AGACAATTTCTTTGGTGGGG+AGG | 0.545858 | 7_2:+52551601 | Msa1062050:CDS |
| AGCTTTGTAGAAGGCCAAAA+GGG | 0.545982 | 7_2:-52551795 | None:intergenic |
| ATACAAATATGAGCAAGAAA+AGG | 0.550926 | 7_2:+52549306 | Msa1062050:CDS |
| GAGTATTGAGGAAACAAAAG+AGG | 0.559224 | 7_2:+52551550 | Msa1062050:CDS |
| GATGGCATCAAATAGGGAAG+AGG | 0.573950 | 7_2:+52549210 | Msa1062050:exon |
| AAGGCCAAAAGGGTCTCTCT+AGG | 0.576747 | 7_2:-52551785 | None:intergenic |
| GGAGATTGCACTAAAACTGA+AGG | 0.581543 | 7_2:+52549276 | Msa1062050:CDS |
| TATAGAGACTATTAGGAGCA+AGG | 0.588881 | 7_2:-52549113 | None:intergenic |
| CAACAATCACCCAATTGTCA+AGG | 0.594522 | 7_2:+52551751 | Msa1062050:CDS |
| AAGCCCATTTGTAACAAGAG+TGG | 0.618332 | 7_2:+52549255 | Msa1062050:CDS |
| GACCAAGTTCATAGATGACA+AGG | 0.631987 | 7_2:+52549510 | Msa1062050:CDS |
| GCCAAAAGGGTCTCTCTAGG+AGG | 0.635297 | 7_2:-52551782 | None:intergenic |
| GAGATTGCACTAAAACTGAA+GGG | 0.650761 | 7_2:+52549277 | Msa1062050:CDS |
| TAATTGAACAAGCTCTACGA+TGG | 0.673591 | 7_2:+52549192 | Msa1062050:exon |
| CTTGGTCCAGAAACGAGTCA+AGG | 0.679207 | 7_2:-52549494 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATAAAAGTAAATCAT+AGG | + | chr7_2:52549132-52549151 | Msa1062050:five_prime_UTR | 10.0% |
| !!! | AAATATTACTCATTTTTAAT+TGG | - | chr7_2:52549964-52549983 | None:intergenic | 10.0% |
| !!! | TAAGTTTTCTATTAATTTTT+GGG | - | chr7_2:52551372-52551391 | None:intergenic | 10.0% |
| !!! | ATAAGTTTTCTATTAATTTT+TGG | - | chr7_2:52551373-52551392 | None:intergenic | 10.0% |
| !!! | TCATTAATTTGTTTTTATAT+AGG | - | chr7_2:52551437-52551456 | None:intergenic | 10.0% |
| !!! | GATTATTTTTCAACAAAAAA+CGG | - | chr7_2:52549094-52549113 | None:intergenic | 15.0% |
| !!! | TTTTATATATAGAGACTATT+AGG | - | chr7_2:52549123-52549142 | None:intergenic | 15.0% |
| !! | TTATCATTATGAATAAAAAC+AGG | - | chr7_2:52549385-52549404 | None:intergenic | 15.0% |
| !!! | AGAATTATTTTAGAAAAACA+TGG | - | chr7_2:52549653-52549672 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAATAATTCTGAA+TGG | + | chr7_2:52549656-52549675 | Msa1062050:intron | 15.0% |
| !!! | TTTTTAATTGGAAAAATGAT+AGG | - | chr7_2:52549952-52549971 | None:intergenic | 15.0% |
| !! | CATTTAAAAACAAATATTCT+GGG | - | chr7_2:52550496-52550515 | None:intergenic | 15.0% |
| !!! | CTGAAAATATTTTTTTTAGA+AGG | + | chr7_2:52550534-52550553 | Msa1062050:intron | 15.0% |
| !! | TTAACTTATGTTAATTGTTA+GGG | - | chr7_2:52550762-52550781 | None:intergenic | 15.0% |
| !! | ATTAACTTATGTTAATTGTT+AGG | - | chr7_2:52550763-52550782 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr7_2:52551298-52551317 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr7_2:52551297-52551316 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr7_2:52551206-52551225 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr7_2:52551106-52551125 | Msa1062050:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+TGG | + | chr7_2:52551298-52551317 | Msa1062050:intron | 15.0% |
| !! | TAAAGTTTGATATTTGAACT+TGG | - | chr7_2:52549576-52549595 | None:intergenic | 20.0% |
| !! | AGAATAAAAGAATAGATAAG+AGG | - | chr7_2:52549737-52549756 | None:intergenic | 20.0% |
| !!! | TTTTTAATGAGAATAGTTCA+GGG | - | chr7_2:52550129-52550148 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGAGAATAGTTC+AGG | - | chr7_2:52550130-52550149 | None:intergenic | 20.0% |
| !! | TAACGTAAGAATAACAAATA+TGG | + | chr7_2:52550214-52550233 | Msa1062050:intron | 20.0% |
| !!! | TTTATGTGACTCATTTTTAT+TGG | - | chr7_2:52550287-52550306 | None:intergenic | 20.0% |
| !! | CCATTTAAAAACAAATATTC+TGG | - | chr7_2:52550497-52550516 | None:intergenic | 20.0% |
| !!! | CCAGAATATTTGTTTTTAAA+TGG | + | chr7_2:52550494-52550513 | Msa1062050:intron | 20.0% |
| !!! | TTTTAAATGGTCTATTAGAA+AGG | + | chr7_2:52550507-52550526 | Msa1062050:intron | 20.0% |
| !!! | TAATCATATGAGTAGATTTT+GGG | - | chr7_2:52550636-52550655 | None:intergenic | 20.0% |
| !!! | TAATCATATGAGTAGATTTT+GGG | - | chr7_2:52550636-52550655 | None:intergenic | 20.0% |
| !! | TAACTTATGTTAATTGTTAG+GGG | - | chr7_2:52550761-52550780 | None:intergenic | 20.0% |
| !! | TGACCTTACTTAAAAAATTA+AGG | + | chr7_2:52550810-52550829 | Msa1062050:intron | 20.0% |
| !! | GACCTTACTTAAAAAATTAA+GGG | + | chr7_2:52550811-52550830 | Msa1062050:intron | 20.0% |
| !!! | AACCCTTAATTTTTTAAGTA+AGG | - | chr7_2:52550816-52550835 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | + | chr7_2:52551141-52551160 | Msa1062050:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr7_2:52551235-52551254 | Msa1062050:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr7_2:52551236-52551255 | Msa1062050:intron | 20.0% |
| !!! | TTTATATAGGAAGTTTTCTA+TGG | - | chr7_2:52551424-52551443 | None:intergenic | 20.0% |
| !! | ATCCAATAATTTATTATCCA+AGG | - | chr7_2:52551966-52551985 | None:intergenic | 20.0% |
| !! | GGATAATAAATTATTGGATT+TGG | + | chr7_2:52551967-52551986 | Msa1062050:three_prime_UTR | 20.0% |
| ! | ATACAAATATGAGCAAGAAA+AGG | + | chr7_2:52549306-52549325 | Msa1062050:CDS | 25.0% |
| ! | ATAAAAACAACCCTTATACA+TGG | + | chr7_2:52549765-52549784 | Msa1062050:intron | 25.0% |
| !! | TCAACACTAATTTTACATCT+TGG | + | chr7_2:52549990-52550009 | Msa1062050:intron | 25.0% |
| !! | TTTTAATGAGAATAGTTCAG+GGG | - | chr7_2:52550128-52550147 | None:intergenic | 25.0% |
| !! | GAAAATAGTCTATTTTACAG+GGG | - | chr7_2:52550381-52550400 | None:intergenic | 25.0% |
| !! | CGAAAATAGTCTATTTTACA+GGG | - | chr7_2:52550382-52550401 | None:intergenic | 25.0% |
| !! | CCTGTAAAATAGACTATTTT+CGG | + | chr7_2:52550380-52550399 | Msa1062050:intron | 25.0% |
| !!! | GAAAATTTTTGGTTTGGAAT+CGG | - | chr7_2:52550561-52550580 | None:intergenic | 25.0% |
| !! | TTCCAAACCAAAAATTTTCT+AGG | + | chr7_2:52550562-52550581 | Msa1062050:intron | 25.0% |
| !! | TCCAAACCAAAAATTTTCTA+GGG | + | chr7_2:52550563-52550582 | Msa1062050:intron | 25.0% |
| !! | AATCATATGAGTAGATTTTG+GGG | - | chr7_2:52550635-52550654 | None:intergenic | 25.0% |
| !! | CTAATCATATGAGTAGATTT+TGG | - | chr7_2:52550637-52550656 | None:intergenic | 25.0% |
| !! | AATCATATGAGTAGATTTTG+GGG | - | chr7_2:52550635-52550654 | None:intergenic | 25.0% |
| !! | CTAATCATATGAGTAGATTT+TGG | - | chr7_2:52550637-52550656 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr7_2:52550946-52550965 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr7_2:52550947-52550966 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr7_2:52551269-52551288 | Msa1062050:intron | 25.0% |
| ! | AATTTCCAAAGCTTTACATT+TGG | + | chr7_2:52551717-52551736 | Msa1062050:CDS | 25.0% |
| ! | GTTCAAAATAGATCAACTTA+AGG | + | chr7_2:52551837-52551856 | Msa1062050:exon | 25.0% |
| ! | ATATGTACTTGTGAGATTTA+AGG | + | chr7_2:52551862-52551881 | Msa1062050:three_prime_UTR | 25.0% |
| ! | CTCCTTGGATAATAAATTAT+TGG | + | chr7_2:52551961-52551980 | Msa1062050:three_prime_UTR | 25.0% |
| ! | TGTACTCAAACTACAGTTTT+TGG | - | chr7_2:52549172-52549191 | None:intergenic | 30.0% |
| AAATATGAGCAAGAAAAGGT+TGG | + | chr7_2:52549310-52549329 | Msa1062050:CDS | 30.0% | |
| AATATGAGCAAGAAAAGGTT+GGG | + | chr7_2:52549311-52549330 | Msa1062050:CDS | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | + | chr7_2:52549431-52549450 | Msa1062050:CDS | 30.0% | |
| TACACAAAGAAAACAGAAGA+GGG | - | chr7_2:52549545-52549564 | None:intergenic | 30.0% | |
| TTACACAAAGAAAACAGAAG+AGG | - | chr7_2:52549546-52549565 | None:intergenic | 30.0% | |
| ! | GCAAGTAAATTTGAGATCTT+AGG | + | chr7_2:52549615-52549634 | Msa1062050:intron | 30.0% |
| AATGAAACTCATCCAAAAAG+AGG | + | chr7_2:52549848-52549867 | Msa1062050:intron | 30.0% | |
| AGAGAGGAGAAATAAAGATA+GGG | + | chr7_2:52550055-52550074 | Msa1062050:intron | 30.0% | |
| TGAAACCATTTGCAAAATCT+AGG | + | chr7_2:52550338-52550357 | Msa1062050:intron | 30.0% | |
| GAAACCATTTGCAAAATCTA+GGG | + | chr7_2:52550339-52550358 | Msa1062050:intron | 30.0% | |
| ! | TTAACCCTAGATTTTGCAAA+TGG | - | chr7_2:52550346-52550365 | None:intergenic | 30.0% |
| ! | CCGAAAATAGTCTATTTTAC+AGG | - | chr7_2:52550383-52550402 | None:intergenic | 30.0% |
| ! | TTTACTCCCTAGGAAATTTT+TGG | + | chr7_2:52550403-52550422 | Msa1062050:intron | 30.0% |
| TCCAAACCAAAAATTTCCTA+GGG | - | chr7_2:52550412-52550431 | None:intergenic | 30.0% | |
| TTCCAAACCAAAAATTTCCT+AGG | - | chr7_2:52550413-52550432 | None:intergenic | 30.0% | |
| ! | ATTCTGAAAATGGCCTATTA+AGG | - | chr7_2:52550468-52550487 | None:intergenic | 30.0% |
| ! | CTGGGAAAAAATTCTGAAAA+TGG | - | chr7_2:52550478-52550497 | None:intergenic | 30.0% |
| !!! | TCCCTAGAAAATTTTTGGTT+TGG | - | chr7_2:52550567-52550586 | None:intergenic | 30.0% |
| !! | AAACCAAAAATTTTCTAGGG+AGG | + | chr7_2:52550566-52550585 | Msa1062050:intron | 30.0% |
| ! | TTACCTCCCTAGAAAATTTT+TGG | - | chr7_2:52550572-52550591 | None:intergenic | 30.0% |
| !! | CCTGTAAAATAGGTCATTTT+TGG | - | chr7_2:52550596-52550615 | None:intergenic | 30.0% |
| ! | CCAAAAATGACCTATTTTAC+AGG | + | chr7_2:52550593-52550612 | Msa1062050:intron | 30.0% |
| !!! | GTGCTTTTTTCCTGTAAAAT+AGG | - | chr7_2:52550606-52550625 | None:intergenic | 30.0% |
| AAGTTATCCACAACTCTTTA+AGG | + | chr7_2:52550725-52550744 | Msa1062050:intron | 30.0% | |
| AGTTATCCACAACTCTTTAA+GGG | + | chr7_2:52550726-52550745 | Msa1062050:intron | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr7_2:52551329-52551348 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr7_2:52551328-52551347 | None:intergenic | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | + | chr7_2:52551009-52551028 | Msa1062050:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr7_2:52551268-52551287 | Msa1062050:intron | 30.0% | |
| ! | AAGTATGGACTAAACTTACA+AGG | + | chr7_2:52551313-52551332 | Msa1062050:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr7_2:52551328-52551347 | Msa1062050:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr7_2:52551329-52551348 | Msa1062050:intron | 30.0% |
| ! | TTCTTTTTACAGTGTTTGAG+TGG | + | chr7_2:52551482-52551501 | Msa1062050:intron | 30.0% |
| TCAAAGACAATTTCTTTGGT+GGG | + | chr7_2:52551597-52551616 | Msa1062050:CDS | 30.0% | |
| AATCCAAAAAGCTATGAGTA+CGG | - | chr7_2:52551651-52551670 | None:intergenic | 30.0% | |
| ATTATCCAAGGAGAAATCTT+AGG | - | chr7_2:52551954-52551973 | None:intergenic | 30.0% | |
| TATAGAGACTATTAGGAGCA+AGG | - | chr7_2:52549116-52549135 | None:intergenic | 35.0% | |
| TAATTGAACAAGCTCTACGA+TGG | + | chr7_2:52549192-52549211 | Msa1062050:exon | 35.0% | |
| ATCAAATAGGGAAGAGGTAA+AGG | + | chr7_2:52549216-52549235 | Msa1062050:CDS | 35.0% | |
| !! | AGAGGTAAAGGTTTTTGGAT+TGG | + | chr7_2:52549228-52549247 | Msa1062050:CDS | 35.0% |
| TCTCCACTCTTGTTACAAAT+GGG | - | chr7_2:52549261-52549280 | None:intergenic | 35.0% | |
| ATCTCCACTCTTGTTACAAA+TGG | - | chr7_2:52549262-52549281 | None:intergenic | 35.0% | |
| GAGATTGCACTAAAACTGAA+GGG | + | chr7_2:52549277-52549296 | Msa1062050:CDS | 35.0% | |
| CAGGAACTTTCTTGTAAACA+GGG | - | chr7_2:52549366-52549385 | None:intergenic | 35.0% | |
| ACAGGAACTTTCTTGTAAAC+AGG | - | chr7_2:52549367-52549386 | None:intergenic | 35.0% | |
| ATCACAAGTGACTCTGATAT+GGG | - | chr7_2:52549409-52549428 | None:intergenic | 35.0% | |
| AATCACAAGTGACTCTGATA+TGG | - | chr7_2:52549410-52549429 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGTAAGAT+TGG | - | chr7_2:52549466-52549485 | None:intergenic | 35.0% | |
| TACCTTGTCATCTATGAACT+TGG | - | chr7_2:52549515-52549534 | None:intergenic | 35.0% | |
| ACACAAAGAAAACAGAAGAG+GGG | - | chr7_2:52549544-52549563 | None:intergenic | 35.0% | |
| TTAAGGTGGTCCATGTATAA+GGG | - | chr7_2:52549778-52549797 | None:intergenic | 35.0% | |
| AATTGTATGTGGGTGTCAAA+GGG | - | chr7_2:52549811-52549830 | None:intergenic | 35.0% | |
| CACGTATCACAATTGTATGT+GGG | - | chr7_2:52549821-52549840 | None:intergenic | 35.0% | |
| TTATGCCTATAGAGAACATG+TGG | - | chr7_2:52550028-52550047 | None:intergenic | 35.0% | |
| TAGGCATAAAACAATGAGAG+AGG | + | chr7_2:52550039-52550058 | Msa1062050:intron | 35.0% | |
| GAGAGAGGAGAAATAAAGAT+AGG | + | chr7_2:52550054-52550073 | Msa1062050:intron | 35.0% | |
| GAGAGGAGAAATAAAGATAG+GGG | + | chr7_2:52550056-52550075 | Msa1062050:intron | 35.0% | |
| ! | TTGCAAAATCTAGGGTTAAC+AGG | + | chr7_2:52550347-52550366 | Msa1062050:intron | 35.0% |
| ! | TGCAAAATCTAGGGTTAACA+GGG | + | chr7_2:52550348-52550367 | Msa1062050:intron | 35.0% |
| !!! | TCCCTAGGAAATTTTTGGTT+TGG | + | chr7_2:52550408-52550427 | Msa1062050:intron | 35.0% |
| AAGTAGGGACTAAACTTACA+AGG | - | chr7_2:52550870-52550889 | None:intergenic | 35.0% | |
| !! | GAGTATTGAGGAAACAAAAG+AGG | + | chr7_2:52551550-52551569 | Msa1062050:CDS | 35.0% |
| GAGCTCAAAGACAATTTCTT+TGG | + | chr7_2:52551593-52551612 | Msa1062050:CDS | 35.0% | |
| CTCAAAGACAATTTCTTTGG+TGG | + | chr7_2:52551596-52551615 | Msa1062050:CDS | 35.0% | |
| CAAAGACAATTTCTTTGGTG+GGG | + | chr7_2:52551598-52551617 | Msa1062050:CDS | 35.0% | |
| CCAAATGCTTCTTGTATAAC+AGG | - | chr7_2:52551674-52551693 | None:intergenic | 35.0% | |
| !! | CCTGTTATACAAGAAGCATT+TGG | + | chr7_2:52551671-52551690 | Msa1062050:CDS | 35.0% |
| TTGGGTGATTGTTGAATTCT+TGG | - | chr7_2:52551745-52551764 | None:intergenic | 35.0% | |
| ! | GCAGTTTTTCCTTGACAATT+GGG | - | chr7_2:52551763-52551782 | None:intergenic | 35.0% |
| ! | TTCATAACGAGCTTTGTAGA+AGG | - | chr7_2:52551807-52551826 | None:intergenic | 35.0% |
| ! | GCTCGTTATGAAAGTCATTT+TGG | + | chr7_2:52551815-52551834 | Msa1062050:CDS | 35.0% |
| CTCTACGATGGCATCAAATA+GGG | + | chr7_2:52549204-52549223 | Msa1062050:exon | 40.0% | |
| ! | AGGGAAGAGGTAAAGGTTTT+TGG | + | chr7_2:52549223-52549242 | Msa1062050:CDS | 40.0% |
| !! | GGTAAAGGTTTTTGGATTGG+TGG | + | chr7_2:52549231-52549250 | Msa1062050:CDS | 40.0% |
| AAGCCCATTTGTAACAAGAG+TGG | + | chr7_2:52549255-52549274 | Msa1062050:CDS | 40.0% | |
| GGAGATTGCACTAAAACTGA+AGG | + | chr7_2:52549276-52549295 | Msa1062050:CDS | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7_2:52549475-52549494 | None:intergenic | 40.0% |
| GACCAAGTTCATAGATGACA+AGG | + | chr7_2:52549510-52549529 | Msa1062050:CDS | 40.0% | |
| TGAGATCTTAGGTGTGTCTT+TGG | + | chr7_2:52549626-52549645 | Msa1062050:intron | 40.0% | |
| GAGATCTTAGGTGTGTCTTT+GGG | + | chr7_2:52549627-52549646 | Msa1062050:intron | 40.0% | |
| CTTAAGGTGGTCCATGTATA+AGG | - | chr7_2:52549779-52549798 | None:intergenic | 40.0% | |
| TATACATGGACCACCTTAAG+TGG | + | chr7_2:52549779-52549798 | Msa1062050:intron | 40.0% | |
| CAATTGTATGTGGGTGTCAA+AGG | - | chr7_2:52549812-52549831 | None:intergenic | 40.0% | |
| CCACGTATCACAATTGTATG+TGG | - | chr7_2:52549822-52549841 | None:intergenic | 40.0% | |
| CCACATACAATTGTGATACG+TGG | + | chr7_2:52549819-52549838 | Msa1062050:intron | 40.0% | |
| CTCATCCAAAAAGAGGATGA+TGG | + | chr7_2:52549855-52549874 | Msa1062050:intron | 40.0% | |
| ! | TCACACCATCATCCTCTTTT+TGG | - | chr7_2:52549863-52549882 | None:intergenic | 40.0% |
| TCACACCACATGTTCTCTAT+AGG | + | chr7_2:52550020-52550039 | Msa1062050:intron | 40.0% | |
| ! | CTATTTTCGGTTTACTCCCT+AGG | + | chr7_2:52550393-52550412 | Msa1062050:intron | 40.0% |
| ATCCAGAATACCGCCTTAAT+AGG | + | chr7_2:52550452-52550471 | Msa1062050:intron | 40.0% | |
| CTGAAAATGGCCTATTAAGG+CGG | - | chr7_2:52550465-52550484 | None:intergenic | 40.0% | |
| ! | TATCCACAACTCTTTAAGGG+TGG | + | chr7_2:52550729-52550748 | Msa1062050:intron | 40.0% |
| !! | AGAACGTGAGAAGAGTATTG+AGG | + | chr7_2:52551538-52551557 | Msa1062050:CDS | 40.0% |
| TGGCTCCAAATGTAAAGCTT+TGG | - | chr7_2:52551725-52551744 | None:intergenic | 40.0% | |
| CAACAATCACCCAATTGTCA+AGG | + | chr7_2:52551751-52551770 | Msa1062050:CDS | 40.0% | |
| ! | GGCAGTTTTTCCTTGACAAT+TGG | - | chr7_2:52551764-52551783 | None:intergenic | 40.0% |
| ! | AGCTTTGTAGAAGGCCAAAA+GGG | - | chr7_2:52551798-52551817 | None:intergenic | 40.0% |
| TGCAACCTAAGATTTCTCCT+TGG | + | chr7_2:52551946-52551965 | Msa1062050:three_prime_UTR | 40.0% | |
| GCTCTACGATGGCATCAAAT+AGG | + | chr7_2:52549203-52549222 | Msa1062050:exon | 45.0% | |
| GATGGCATCAAATAGGGAAG+AGG | + | chr7_2:52549210-52549229 | Msa1062050:exon | 45.0% | |
| ! | CGAGTCAAGGCTCTTTTGTA+AGG | - | chr7_2:52549484-52549503 | None:intergenic | 45.0% |
| ! | AAAGAGCCTTGACTCGTTTC+TGG | + | chr7_2:52549488-52549507 | Msa1062050:CDS | 45.0% |
| ! | CAAAGGGTGTATGCCACTTA+AGG | - | chr7_2:52549795-52549814 | None:intergenic | 45.0% |
| CATGTACACTTTCACGTGAG+AGG | - | chr7_2:52549904-52549923 | None:intergenic | 45.0% | |
| ! | CACGTGAAAGTGTACATGAG+AGG | + | chr7_2:52549906-52549925 | Msa1062050:intron | 45.0% |
| GAACTCTTCTTCGAGAAGAG+TGG | - | chr7_2:52550161-52550180 | None:intergenic | 45.0% | |
| ATGCCACCCTTAAAGAGTTG+TGG | - | chr7_2:52550735-52550754 | None:intergenic | 45.0% | |
| ! | CAACTCTTTAAGGGTGGCAT+AGG | + | chr7_2:52550735-52550754 | Msa1062050:intron | 45.0% |
| AGACAATTTCTTTGGTGGGG+AGG | + | chr7_2:52551601-52551620 | Msa1062050:CDS | 45.0% | |
| ! | CTGCCGTACTCATAGCTTTT+TGG | + | chr7_2:52551645-52551664 | Msa1062050:CDS | 45.0% |
| ! | GAGCTTTGTAGAAGGCCAAA+AGG | - | chr7_2:52551799-52551818 | None:intergenic | 45.0% |
| !!! | ATAAGTAAATTTTTTTTATA+GGG | - | chr7_2:52550914-52550933 | None:intergenic | 5.0% |
| !!! | TATAAGTAAATTTTTTTTAT+AGG | - | chr7_2:52550915-52550934 | None:intergenic | 5.0% |
| CTTGGTCCAGAAACGAGTCA+AGG | - | chr7_2:52549497-52549516 | None:intergenic | 50.0% | |
| ! | AGGGTGTATGCCACTTAAGG+TGG | - | chr7_2:52549792-52549811 | None:intergenic | 50.0% |
| ATAGGGGAGAGATGTGAGCT+GGG | + | chr7_2:52550072-52550091 | Msa1062050:intron | 50.0% | |
| ! | AGATGTGAGCTGGGTGGATT+GGG | + | chr7_2:52550081-52550100 | Msa1062050:intron | 50.0% |
| !! | CTGGGTGGATTGGGTTTGTT+GGG | + | chr7_2:52550090-52550109 | Msa1062050:intron | 50.0% |
| !! | TGGGTGGATTGGGTTTGTTG+GGG | + | chr7_2:52550091-52550110 | Msa1062050:intron | 50.0% |
| GGCCTATTAAGGCGGTATTC+TGG | - | chr7_2:52550457-52550476 | None:intergenic | 50.0% | |
| TTCTTTGGTGGGGAGGAGAT+TGG | + | chr7_2:52551608-52551627 | Msa1062050:CDS | 50.0% | |
| AAGGCCAAAAGGGTCTCTCT+AGG | - | chr7_2:52551788-52551807 | None:intergenic | 50.0% | |
| GATAGGGGAGAGATGTGAGC+TGG | + | chr7_2:52550071-52550090 | Msa1062050:intron | 55.0% | |
| GAGATGTGAGCTGGGTGGAT+TGG | + | chr7_2:52550080-52550099 | Msa1062050:intron | 55.0% | |
| !! | GCTGGGTGGATTGGGTTTGT+TGG | + | chr7_2:52550089-52550108 | Msa1062050:intron | 55.0% |
| !! | GGGTGGATTGGGTTTGTTGG+GGG | + | chr7_2:52550092-52550111 | Msa1062050:intron | 55.0% |
| !! | GATTGGGTTTGTTGGGGGCA+GGG | + | chr7_2:52550097-52550116 | Msa1062050:intron | 55.0% |
| !! | ATTGGGTTTGTTGGGGGCAG+GGG | + | chr7_2:52550098-52550117 | Msa1062050:intron | 55.0% |
| ! | GCCTCCTAGAGAGACCCTTT+TGG | + | chr7_2:52551781-52551800 | Msa1062050:CDS | 55.0% |
| GCCAAAAGGGTCTCTCTAGG+AGG | - | chr7_2:52551785-52551804 | None:intergenic | 55.0% | |
| !! | GGATTGGGTTTGTTGGGGGC+AGG | + | chr7_2:52550096-52550115 | Msa1062050:intron | 60.0% |
| !! | TTGGGTTTGTTGGGGGCAGG+GGG | + | chr7_2:52550099-52550118 | Msa1062050:intron | 60.0% |
| GGGGAGAGATGTGAGCTGGG+TGG | + | chr7_2:52550075-52550094 | Msa1062050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 52549026 | 52552004 | 52549026 | ID=Msa1062050;Name=Msa1062050 |
| chr7_2 | mRNA | 52549026 | 52552004 | 52549026 | ID=Msa1062050-mRNA-1;Parent=Msa1062050;Name=Msa1062050-mRNA-1;_AED=0.38;_eAED=0.38;_QI=185|1|1|1|1|1|2|157|224 |
| chr7_2 | exon | 52549026 | 52549531 | 52549026 | ID=Msa1062050-mRNA-1:exon:9490;Parent=Msa1062050-mRNA-1 |
| chr7_2 | exon | 52551494 | 52552004 | 52551494 | ID=Msa1062050-mRNA-1:exon:9491;Parent=Msa1062050-mRNA-1 |
| chr7_2 | five_prime_UTR | 52549026 | 52549210 | 52549026 | ID=Msa1062050-mRNA-1:five_prime_utr;Parent=Msa1062050-mRNA-1 |
| chr7_2 | CDS | 52549211 | 52549531 | 52549211 | ID=Msa1062050-mRNA-1:cds;Parent=Msa1062050-mRNA-1 |
| chr7_2 | CDS | 52551494 | 52551847 | 52551494 | ID=Msa1062050-mRNA-1:cds;Parent=Msa1062050-mRNA-1 |
| chr7_2 | three_prime_UTR | 52551848 | 52552004 | 52551848 | ID=Msa1062050-mRNA-1:three_prime_utr;Parent=Msa1062050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
