AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1107210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107210 MtrunA17_Chr7g0240551 94.643 224 12 0 1 224 1 224 2.86e-155 429
Msa1107210 MtrunA17_Chr7g0240531 88.393 224 26 0 1 224 1 224 2.64e-143 399
Msa1107210 MtrunA17_Chr7g0240541 84.821 224 34 0 1 224 1 224 4.57e-140 390
Msa1107210 MtrunA17_Chr7g0240581 79.464 224 46 0 1 224 1 224 2.85e-132 371
Msa1107210 MtrunA17_Chr7g0240561 77.679 224 50 0 1 224 1 224 1.12e-127 359
Msa1107210 MtrunA17_Chr7g0240511 79.911 224 40 1 1 224 1 219 1.35e-126 357
Msa1107210 MtrunA17_Chr7g0240521 76.889 225 51 1 1 224 8 232 4.27e-117 333
Msa1107210 MtrunA17_Chr7g0240631 68.161 223 71 0 1 223 1 223 6.27e-114 325
Msa1107210 MtrunA17_Chr7g0240681 69.778 225 67 1 1 224 1 225 3.58e-113 323
Msa1107210 MtrunA17_Chr7g0240641 67.713 223 72 0 1 223 1 223 6.38e-112 320
Msa1107210 MtrunA17_Chr7g0240611 67.580 219 67 1 1 219 1 215 1.76e-105 303
Msa1107210 MtrunA17_Chr4g0008791 63.470 219 80 0 1 219 1 219 3.76e-104 300
Msa1107210 MtrunA17_Chr7g0240691 65.116 215 74 1 6 219 36 250 1.77e-101 294
Msa1107210 MtrunA17_Chr7g0240671 64.251 207 70 1 8 214 5 207 2.19e-94 275
Msa1107210 MtrunA17_Chr4g0008781 60.280 214 83 2 3 215 4 216 4.87e-93 271
Msa1107210 MtrunA17_Chr7g0240651 63.927 219 75 1 1 219 1 215 7.69e-89 261
Msa1107210 MtrunA17_Chr7g0240661 64.019 214 73 1 1 214 1 210 1.01e-86 256
Msa1107210 MtrunA17_Chr6g0483141 47.596 208 107 2 7 213 3 209 2.81e-65 201
Msa1107210 MtrunA17_Chr3g0132581 48.113 212 108 2 5 215 3 213 1.53e-62 194
Msa1107210 MtrunA17_Chr1g0196771 46.262 214 110 2 6 216 2 213 1.78e-62 194
Msa1107210 MtrunA17_Chr8g0379581 42.727 220 124 2 4 222 2 220 6.27e-60 187
Msa1107210 MtrunA17_Chr1g0212301 43.636 220 117 3 7 221 3 220 8.88e-57 179
Msa1107210 MtrunA17_Chr5g0417011 42.793 222 119 3 1 215 1 221 1.90e-56 179
Msa1107210 MtrunA17_Chr8g0379561 42.857 217 121 3 1 216 1 215 1.13e-54 174
Msa1107210 MtrunA17_Chr1g0196691 41.441 222 123 3 7 223 28 247 7.37e-53 170
Msa1107210 MtrunA17_Chr1g0196661 42.105 209 117 2 7 212 3 210 3.54e-52 168
Msa1107210 MtrunA17_Chr4g0029341 41.121 214 120 3 6 215 3 214 6.13e-51 164
Msa1107210 MtrunA17_Chr8g0363751 43.379 219 116 3 5 215 3 221 7.50e-51 165
Msa1107210 MtrunA17_Chr1g0196711 41.429 210 119 2 7 213 3 211 1.89e-50 163
Msa1107210 MtrunA17_Chr1g0196721 41.121 214 122 2 8 218 3 215 2.99e-50 163
Msa1107210 MtrunA17_Chr5g0415411 42.152 223 119 3 1 215 1 221 4.31e-50 162
Msa1107210 MtrunA17_Chr2g0312771 40.191 209 120 5 6 212 3 208 3.82e-44 147
Msa1107210 MtrunA17_Chr2g0312731 40.777 206 117 5 6 209 3 205 8.98e-44 146
Msa1107210 MtrunA17_Chr2g0312751 39.713 209 121 5 6 212 3 208 1.34e-43 145
Msa1107210 MtrunA17_Chr3g0107731 41.063 207 117 5 16 220 18 221 1.56e-43 145
Msa1107210 MtrunA17_Chr3g0107741 37.900 219 131 5 4 220 6 221 1.21e-40 138
Msa1107210 MtrunA17_Chr2g0312791 41.176 204 116 4 6 207 3 204 1.33e-40 138
Msa1107210 MtrunA17_Chr2g0312811 40.566 212 117 7 6 212 3 210 2.66e-40 137
Msa1107210 MtrunA17_Chr8g0357241 39.423 208 118 5 16 218 13 217 1.03e-39 135
Msa1107210 MtrunA17_Chr8g0357211 38.942 208 119 5 16 218 13 217 2.81e-39 134
Msa1107210 MtrunA17_Chr2g0312781 37.441 211 127 5 1 209 15 222 4.77e-39 134
Msa1107210 MtrunA17_Chr4g0069471 44.385 187 96 5 3 186 21 202 9.10e-39 133
Msa1107210 MtrunA17_Chr2g0312721 35.909 220 136 4 6 223 3 219 1.87e-38 132
Msa1107210 MtrunA17_Chr8g0391631 46.452 155 75 3 7 153 21 175 2.90e-37 128
Msa1107210 MtrunA17_Chr5g0433801 36.792 212 129 4 3 212 2 210 1.00e-36 128
Msa1107210 MtrunA17_Chr2g0312681 36.058 208 128 4 7 212 4 208 1.13e-33 120
Msa1107210 MtrunA17_Chr2g0312691 37.019 208 126 4 7 212 4 208 1.27e-33 120
Msa1107210 MtrunA17_Chr2g0312711 38.220 191 112 4 16 204 13 199 1.97e-28 106
Msa1107210 MtrunA17_Chr2g0313561 48.276 58 29 1 51 107 2 59 5.57e-14 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107210 AT3G09270.1 53.182 220 99 4 3 219 2 220 3.08e-75 227
Msa1107210 AT2G29420.1 47.005 217 113 2 3 218 5 220 4.89e-70 214
Msa1107210 AT2G29490.1 47.847 209 106 3 1 207 1 208 3.87e-60 188
Msa1107210 AT2G29450.1 46.860 207 108 2 3 207 2 208 6.99e-58 183
Msa1107210 AT2G29480.1 47.847 209 106 3 1 207 1 208 9.56e-58 182
Msa1107210 AT2G29460.1 45.455 209 111 3 1 207 1 208 2.90e-54 174
Msa1107210 AT2G29470.1 44.286 210 113 4 1 207 1 209 2.05e-52 169
Msa1107210 AT2G29440.1 44.498 209 112 4 1 207 1 207 2.25e-52 169
Msa1107210 AT1G10370.1 42.857 224 113 5 1 214 1 219 4.41e-50 163
Msa1107210 AT1G69930.1 37.500 224 134 2 2 219 7 230 2.11e-49 161
Msa1107210 AT1G27130.1 39.556 225 127 4 1 217 1 224 2.22e-49 161
Msa1107210 AT1G59670.1 41.667 216 118 3 5 212 4 219 2.45e-47 156
Msa1107210 AT1G59700.1 42.202 218 118 3 5 214 4 221 4.32e-46 153
Msa1107210 AT5G62480.1 39.908 218 120 4 8 215 9 225 1.28e-45 152
Msa1107210 AT1G74590.1 36.364 220 133 3 1 214 1 219 5.74e-44 147
Msa1107210 AT1G78340.1 43.256 215 114 6 6 216 3 213 1.05e-43 146
Msa1107210 AT1G27140.1 37.826 230 133 4 1 221 1 229 1.07e-43 147
Msa1107210 AT1G78370.1 40.097 207 118 6 16 220 13 215 5.60e-43 144
Msa1107210 AT1G10360.1 36.574 216 130 2 6 214 4 219 7.65e-43 144
Msa1107210 AT1G78380.1 40.865 208 118 4 7 212 4 208 1.17e-42 144
Msa1107210 AT1G69920.1 37.281 228 133 4 1 218 26 253 1.47e-42 144
Msa1107210 AT1G78320.1 39.904 208 120 4 5 210 2 206 8.52e-41 139
Msa1107210 AT1G17170.1 40.845 213 120 6 6 216 3 211 1.10e-40 139
Msa1107210 AT1G53680.1 38.679 212 125 4 1 209 1 210 2.35e-39 135
Msa1107210 AT1G17180.1 39.234 209 122 5 6 212 3 208 9.68e-39 134
Msa1107210 AT1G78360.1 39.713 209 120 6 7 212 4 209 2.37e-35 125
Msa1107210 AT1G17190.1 42.135 178 98 5 16 191 14 188 2.82e-34 122
Msa1107210 AT3G43800.1 36.715 207 122 6 4 204 2 205 7.57e-33 119
Msa1107210 AT5G62480.2 31.336 217 114 4 8 215 9 199 6.79e-28 105
Msa1107210 AT5G62480.3 31.336 217 113 4 8 215 9 198 1.32e-27 104
Msa1107210 AT1G78320.2 32.524 206 109 4 6 210 3 179 4.87e-24 95.1
Msa1107210 AT2G02380.1 26.977 215 138 6 5 207 9 216 6.83e-14 68.6
Msa1107210 AT2G02390.1 27.149 221 134 6 3 207 4 213 8.66e-13 65.5
Msa1107210 AT2G02390.3 27.074 229 131 8 3 207 4 220 5.14e-12 63.5
Msa1107210 AT2G02390.2 35.714 98 59 2 3 97 4 100 5.52e-11 60.1

Find 51 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAGCCTTGACTCGTTTC+TGG 0.137920 7_3:+48701618 Msa1107210:CDS
CTCCTTGGATAATAAATTAT+TGG 0.190682 7_3:+48703496 Msa1107210:three_prime_UTR
GCTCGTTATGAAAGTCATTT+TGG 0.207854 7_3:+48703350 Msa1107210:CDS
GGATAATAAATTATTGGATT+TGG 0.260089 7_3:+48703502 Msa1107210:three_prime_UTR
ATATGTACTTGTGAGATTTA+AGG 0.269889 7_3:+48703397 Msa1107210:three_prime_UTR
CCAAATGCTTCTTGTATAAC+AGG 0.284363 7_3:-48703206 None:intergenic
GAGCTCAAAGACAATTTCTT+TGG 0.287056 7_3:+48703128 Msa1107210:CDS
TTGGGTGATTGTTGAATTCT+TGG 0.291920 7_3:-48703277 None:intergenic
ATTATCCAAGGAGAAATCTT+AGG 0.294121 7_3:-48703486 None:intergenic
ACAGGAACTTTCTTGTAAAC+AGG 0.303772 7_3:-48701494 None:intergenic
AGGAATAGTTCTCACATTAT+AGG 0.312748 7_3:+48701143 None:intergenic
CTCTACGATGGCATCAAATA+AGG 0.319615 7_3:+48701334 Msa1107210:exon
AATCACAAGTGACTCAGATA+TGG 0.347078 7_3:-48701537 None:intergenic
TGGCTCCAAATGTAAAGCTT+TGG 0.348494 7_3:-48703257 None:intergenic
ATCTCCACTCTTGTTACAAA+TGG 0.364739 7_3:-48701389 None:intergenic
TAAGGATCAGAAGGTAAGAT+TGG 0.370607 7_3:-48701593 None:intergenic
AATTTCCAAAGCTTTACATT+TGG 0.388847 7_3:+48703252 Msa1107210:CDS
CCTGTTATACAAGAAGCATT+TGG 0.389924 7_3:+48703206 Msa1107210:CDS
GTTCAAAATAGATCAACTTA+AGG 0.392026 7_3:+48703372 Msa1107210:exon
TTCTTTGGTGGGGAGGAGAT+TGG 0.394489 7_3:+48703143 Msa1107210:CDS
AATACGAGAAAGAGAAGTTT+AGG 0.396279 7_3:+48701441 Msa1107210:CDS
TTCATAACGAGCTTTGTAGA+AGG 0.410089 7_3:-48703339 None:intergenic
TATATATAAAAGTAAATCAT+AGG 0.414169 7_3:+48701262 Msa1107210:five_prime_UTR
GCCTCCTAGAGAGACCCTTT+TGG 0.431280 7_3:+48703316 Msa1107210:CDS
CTCAAAGACAATTTCTTTGG+TGG 0.447184 7_3:+48703131 Msa1107210:CDS
TACCTTGTCATCTATGAACT+TGG 0.462042 7_3:-48701642 None:intergenic
ATCCAATAATTTATTATCCA+AGG 0.481656 7_3:-48703498 None:intergenic
TCTCCACTCTTGTTACAAAT+GGG 0.486382 7_3:-48701388 None:intergenic
GAGCTTTGTAGAAGGCCAAA+AGG 0.488923 7_3:-48703331 None:intergenic
ATCACAAGTGACTCAGATAT+GGG 0.497397 7_3:-48701536 None:intergenic
TCAAAGACAATTTCTTTGGT+GGG 0.500911 7_3:+48703132 Msa1107210:CDS
CAAAGACAATTTCTTTGGTG+GGG 0.503596 7_3:+48703133 Msa1107210:CDS
TTGAGTATATTGATGAGACT+TGG 0.504629 7_3:+48701561 Msa1107210:CDS
CAGGAACTTTCTTGTAAACA+GGG 0.506672 7_3:-48701493 None:intergenic
AGAACGTGAGAAGAGTATTG+AGG 0.526929 7_3:+48703073 Msa1107210:CDS
TGCAACCTAAGATTTCTCCT+TGG 0.545237 7_3:+48703481 Msa1107210:three_prime_UTR
AGACAATTTCTTTGGTGGGG+AGG 0.545858 7_3:+48703136 Msa1107210:CDS
AGCTTTGTAGAAGGCCAAAA+GGG 0.545982 7_3:-48703330 None:intergenic
ATCAAATAAGGAAGAGGTGA+AGG 0.549693 7_3:+48701346 Msa1107210:CDS
GAGTATTGAGGAAACAAAAG+AGG 0.559224 7_3:+48703085 Msa1107210:CDS
GATGGCATCAAATAAGGAAG+AGG 0.575114 7_3:+48701340 Msa1107210:exon
AAGGCCAAAAGGGTCTCTCT+AGG 0.576747 7_3:-48703320 None:intergenic
GGAGATTGCACTAAAACTGA+AGG 0.581543 7_3:+48701406 Msa1107210:CDS
TATAGAGACTATTAGGAGCA+AGG 0.588881 7_3:-48701243 None:intergenic
CAACAATCACCCAATTGTCA+AGG 0.594522 7_3:+48703286 Msa1107210:CDS
AAGCCCATTTGTAACAAGAG+TGG 0.618332 7_3:+48701385 Msa1107210:CDS
GACCAAGTTCATAGATGACA+AGG 0.631987 7_3:+48701640 Msa1107210:CDS
GCCAAAAGGGTCTCTCTAGG+AGG 0.635297 7_3:-48703317 None:intergenic
GAGATTGCACTAAAACTGAA+GGG 0.650761 7_3:+48701407 Msa1107210:CDS
TAATTGAACAAGCTCTACGA+TGG 0.673591 7_3:+48701322 Msa1107210:exon
CTTGGTCCAGAAACGAGTCA+AGG 0.679207 7_3:-48701624 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAAAAGTAAATCAT+AGG + chr7_3:48701262-48701281 Msa1107210:five_prime_UTR 10.0%
!!! AAATATTACTCATTTTTAAT+TGG - chr7_3:48702094-48702113 None:intergenic 10.0%
!!! CTGAAAATATTTTTTTTAAA+AGG + chr7_3:48702668-48702687 Msa1107210:intron 10.0%
!!! TTCTATTAATTTTTTAAGTA+AGG - chr7_3:48702901-48702920 None:intergenic 10.0%
!!! TCATTAATTTGTTTTTATAT+AGG - chr7_3:48702972-48702991 None:intergenic 10.0%
!! TATATATAAAAGTAAATCAT+AGG + chr7_3:48701262-48701281 Msa1107210:five_prime_UTR 10.0%
!!! AAATATTACTCATTTTTAAT+TGG - chr7_3:48702094-48702113 None:intergenic 10.0%
!!! CTGAAAATATTTTTTTTAAA+AGG + chr7_3:48702668-48702687 Msa1107210:intron 10.0%
!!! TTCTATTAATTTTTTAAGTA+AGG - chr7_3:48702901-48702920 None:intergenic 10.0%
!!! TCATTAATTTGTTTTTATAT+AGG - chr7_3:48702972-48702991 None:intergenic 10.0%
!!! GATTATTTTTCAACAAAAAA+CGG - chr7_3:48701224-48701243 None:intergenic 15.0%
!!! TTTTATATATAGAGACTATT+AGG - chr7_3:48701253-48701272 None:intergenic 15.0%
!! TTATCATTATGAATAAAAAC+AGG - chr7_3:48701515-48701534 None:intergenic 15.0%
!!! AGAATTATTTTAGAAAAACA+TGG - chr7_3:48701783-48701802 None:intergenic 15.0%
!!! TTTTCTAAAATAATTCTGAA+TGG + chr7_3:48701786-48701805 Msa1107210:intron 15.0%
!!! TTTTTAATTGGAAAAATGAT+AGG - chr7_3:48702082-48702101 None:intergenic 15.0%
!! TTAACTTATGTTAATTGTTA+GGG - chr7_3:48702847-48702866 None:intergenic 15.0%
!! ATTAACTTATGTTAATTGTT+AGG - chr7_3:48702848-48702867 None:intergenic 15.0%
!!! GATTATTTTTCAACAAAAAA+CGG - chr7_3:48701224-48701243 None:intergenic 15.0%
!!! TTTTATATATAGAGACTATT+AGG - chr7_3:48701253-48701272 None:intergenic 15.0%
!! TTATCATTATGAATAAAAAC+AGG - chr7_3:48701515-48701534 None:intergenic 15.0%
!!! AGAATTATTTTAGAAAAACA+TGG - chr7_3:48701783-48701802 None:intergenic 15.0%
!!! TTTTCTAAAATAATTCTGAA+TGG + chr7_3:48701786-48701805 Msa1107210:intron 15.0%
!!! TTTTTAATTGGAAAAATGAT+AGG - chr7_3:48702082-48702101 None:intergenic 15.0%
!! TTAACTTATGTTAATTGTTA+GGG - chr7_3:48702847-48702866 None:intergenic 15.0%
!! ATTAACTTATGTTAATTGTT+AGG - chr7_3:48702848-48702867 None:intergenic 15.0%
!! TAAAGTTTGATATTTGAACT+TGG - chr7_3:48701706-48701725 None:intergenic 20.0%
!! AGAATAAAAGAATAGATAAG+AGG - chr7_3:48701867-48701886 None:intergenic 20.0%
!!! TTTTTAATGAGAAAAGTTCA+GGG - chr7_3:48702265-48702284 None:intergenic 20.0%
!!! ATTTTTAATGAGAAAAGTTC+AGG - chr7_3:48702266-48702285 None:intergenic 20.0%
!!! TTTATGTGACTCATTTTTAT+TGG - chr7_3:48702423-48702442 None:intergenic 20.0%
!!! TCCTAGAATTTGTTTTTAAA+TGG + chr7_3:48702628-48702647 Msa1107210:intron 20.0%
!! ACCATTTAAAAACAAATTCT+AGG - chr7_3:48702632-48702651 None:intergenic 20.0%
!!! TTTTAAATGGTCTATTAGAA+AGG + chr7_3:48702641-48702660 Msa1107210:intron 20.0%
!!! TAATCATATGAGTAGATTTT+GGG - chr7_3:48702771-48702790 None:intergenic 20.0%
!! TAACTTATGTTAATTGTTAG+GGG - chr7_3:48702846-48702865 None:intergenic 20.0%
!!! TTTATATAGGAAGTTTTCTA+TGG - chr7_3:48702959-48702978 None:intergenic 20.0%
!! ATCCAATAATTTATTATCCA+AGG - chr7_3:48703501-48703520 None:intergenic 20.0%
!! GGATAATAAATTATTGGATT+TGG + chr7_3:48703502-48703521 Msa1107210:three_prime_UTR 20.0%
!! TAAAGTTTGATATTTGAACT+TGG - chr7_3:48701706-48701725 None:intergenic 20.0%
!! AGAATAAAAGAATAGATAAG+AGG - chr7_3:48701867-48701886 None:intergenic 20.0%
!!! TTTTTAATGAGAAAAGTTCA+GGG - chr7_3:48702265-48702284 None:intergenic 20.0%
!!! ATTTTTAATGAGAAAAGTTC+AGG - chr7_3:48702266-48702285 None:intergenic 20.0%
!!! TTTATGTGACTCATTTTTAT+TGG - chr7_3:48702423-48702442 None:intergenic 20.0%
!!! TCCTAGAATTTGTTTTTAAA+TGG + chr7_3:48702628-48702647 Msa1107210:intron 20.0%
!! ACCATTTAAAAACAAATTCT+AGG - chr7_3:48702632-48702651 None:intergenic 20.0%
!!! TTTTAAATGGTCTATTAGAA+AGG + chr7_3:48702641-48702660 Msa1107210:intron 20.0%
!!! TAATCATATGAGTAGATTTT+GGG - chr7_3:48702771-48702790 None:intergenic 20.0%
!! TAACTTATGTTAATTGTTAG+GGG - chr7_3:48702846-48702865 None:intergenic 20.0%
!!! TTTATATAGGAAGTTTTCTA+TGG - chr7_3:48702959-48702978 None:intergenic 20.0%
!! ATCCAATAATTTATTATCCA+AGG - chr7_3:48703501-48703520 None:intergenic 20.0%
!! GGATAATAAATTATTGGATT+TGG + chr7_3:48703502-48703521 Msa1107210:three_prime_UTR 20.0%
! ATAAAAACAACCCTTATACA+TGG + chr7_3:48701895-48701914 Msa1107210:intron 25.0%
!! TCAACACTAATTTTACATCT+TGG + chr7_3:48702120-48702139 Msa1107210:intron 25.0%
!! TTTTAATGAGAAAAGTTCAG+GGG - chr7_3:48702264-48702283 None:intergenic 25.0%
!! GAAAATAGTCTATTTTACAG+GGG - chr7_3:48702517-48702536 None:intergenic 25.0%
!! CGAAAATAGTCTATTTTACA+GGG - chr7_3:48702518-48702537 None:intergenic 25.0%
!! CCTGTAAAATAGACTATTTT+CGG + chr7_3:48702516-48702535 Msa1107210:intron 25.0%
!! CTAGGAAAAAATTCTGAAAA+TGG - chr7_3:48702614-48702633 None:intergenic 25.0%
!! TTCCAAACCAAAAATTTTCT+AGG + chr7_3:48702696-48702715 Msa1107210:intron 25.0%
!! TCCAAACCAAAAATTTTCTA+GGG + chr7_3:48702697-48702716 Msa1107210:intron 25.0%
!!! TGCTTTTTTTCCTGTAAAAT+AGG - chr7_3:48702740-48702759 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG - chr7_3:48702770-48702789 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG - chr7_3:48702772-48702791 None:intergenic 25.0%
! AATTTCCAAAGCTTTACATT+TGG + chr7_3:48703252-48703271 Msa1107210:CDS 25.0%
! GTTCAAAATAGATCAACTTA+AGG + chr7_3:48703372-48703391 Msa1107210:exon 25.0%
! ATATGTACTTGTGAGATTTA+AGG + chr7_3:48703397-48703416 Msa1107210:three_prime_UTR 25.0%
! CTCCTTGGATAATAAATTAT+TGG + chr7_3:48703496-48703515 Msa1107210:three_prime_UTR 25.0%
! ATAAAAACAACCCTTATACA+TGG + chr7_3:48701895-48701914 Msa1107210:intron 25.0%
!! TCAACACTAATTTTACATCT+TGG + chr7_3:48702120-48702139 Msa1107210:intron 25.0%
!! TTTTAATGAGAAAAGTTCAG+GGG - chr7_3:48702264-48702283 None:intergenic 25.0%
!! GAAAATAGTCTATTTTACAG+GGG - chr7_3:48702517-48702536 None:intergenic 25.0%
!! CGAAAATAGTCTATTTTACA+GGG - chr7_3:48702518-48702537 None:intergenic 25.0%
!! CCTGTAAAATAGACTATTTT+CGG + chr7_3:48702516-48702535 Msa1107210:intron 25.0%
!! CTAGGAAAAAATTCTGAAAA+TGG - chr7_3:48702614-48702633 None:intergenic 25.0%
!! TTCCAAACCAAAAATTTTCT+AGG + chr7_3:48702696-48702715 Msa1107210:intron 25.0%
!! TCCAAACCAAAAATTTTCTA+GGG + chr7_3:48702697-48702716 Msa1107210:intron 25.0%
!!! TGCTTTTTTTCCTGTAAAAT+AGG - chr7_3:48702740-48702759 None:intergenic 25.0%
!! AATCATATGAGTAGATTTTG+GGG - chr7_3:48702770-48702789 None:intergenic 25.0%
!! CTAATCATATGAGTAGATTT+TGG - chr7_3:48702772-48702791 None:intergenic 25.0%
! AATTTCCAAAGCTTTACATT+TGG + chr7_3:48703252-48703271 Msa1107210:CDS 25.0%
! GTTCAAAATAGATCAACTTA+AGG + chr7_3:48703372-48703391 Msa1107210:exon 25.0%
! ATATGTACTTGTGAGATTTA+AGG + chr7_3:48703397-48703416 Msa1107210:three_prime_UTR 25.0%
! CTCCTTGGATAATAAATTAT+TGG + chr7_3:48703496-48703515 Msa1107210:three_prime_UTR 25.0%
! TGTACTCAAACAACTGTTTT+TGG - chr7_3:48701302-48701321 None:intergenic 30.0%
AATACGAGAAAGAGAAGTTT+AGG + chr7_3:48701441-48701460 Msa1107210:CDS 30.0%
TTGAGTATATTGATGAGACT+TGG + chr7_3:48701561-48701580 Msa1107210:CDS 30.0%
! GCAAGTAAATTTGAGATCTT+AGG + chr7_3:48701745-48701764 Msa1107210:intron 30.0%
AGAGAGGAGAAATAAAGATA+GGG + chr7_3:48702185-48702204 Msa1107210:intron 30.0%
TGAAACCATTTGCAAAATCT+AGG + chr7_3:48702474-48702493 Msa1107210:intron 30.0%
GAAACCATTTGCAAAATCTA+GGG + chr7_3:48702475-48702494 Msa1107210:intron 30.0%
! TTAACCCTAGATTTTGCAAA+TGG - chr7_3:48702482-48702501 None:intergenic 30.0%
! CCGAAAATAGTCTATTTTAC+AGG - chr7_3:48702519-48702538 None:intergenic 30.0%
! TTTACTCCCTAGGAAATTTT+TGG + chr7_3:48702539-48702558 Msa1107210:intron 30.0%
TCCAAACCAAAAATTTCCTA+GGG - chr7_3:48702548-48702567 None:intergenic 30.0%
TTCCAAACCAAAAATTTCCT+AGG - chr7_3:48702549-48702568 None:intergenic 30.0%
! ATTCTGGATTGTTTTCTAAC+AGG - chr7_3:48702577-48702596 None:intergenic 30.0%
!!! TCCCTAGAAAATTTTTGGTT+TGG - chr7_3:48702701-48702720 None:intergenic 30.0%
!! AAACCAAAAATTTTCTAGGG+AGG + chr7_3:48702700-48702719 Msa1107210:intron 30.0%
! TTACCTCCCTAGAAAATTTT+TGG - chr7_3:48702706-48702725 None:intergenic 30.0%
!! CCTGTAAAATAGGTCATTTT+TGG - chr7_3:48702730-48702749 None:intergenic 30.0%
! CCAAAAATGACCTATTTTAC+AGG + chr7_3:48702727-48702746 Msa1107210:intron 30.0%
AAGTTATCCACAACTCTTTA+AGG + chr7_3:48702810-48702829 Msa1107210:intron 30.0%
AGTTATCCACAACTCTTTAA+GGG + chr7_3:48702811-48702830 Msa1107210:intron 30.0%
! TTCTTTTTACAGTGTTTGAG+TGG + chr7_3:48703017-48703036 Msa1107210:intron 30.0%
TCAAAGACAATTTCTTTGGT+GGG + chr7_3:48703132-48703151 Msa1107210:CDS 30.0%
AATCCAAAAAGCTATGAGTA+CGG - chr7_3:48703186-48703205 None:intergenic 30.0%
ATTATCCAAGGAGAAATCTT+AGG - chr7_3:48703489-48703508 None:intergenic 30.0%
! TGTACTCAAACAACTGTTTT+TGG - chr7_3:48701302-48701321 None:intergenic 30.0%
AATACGAGAAAGAGAAGTTT+AGG + chr7_3:48701441-48701460 Msa1107210:CDS 30.0%
TTGAGTATATTGATGAGACT+TGG + chr7_3:48701561-48701580 Msa1107210:CDS 30.0%
! GCAAGTAAATTTGAGATCTT+AGG + chr7_3:48701745-48701764 Msa1107210:intron 30.0%
AGAGAGGAGAAATAAAGATA+GGG + chr7_3:48702185-48702204 Msa1107210:intron 30.0%
TGAAACCATTTGCAAAATCT+AGG + chr7_3:48702474-48702493 Msa1107210:intron 30.0%
GAAACCATTTGCAAAATCTA+GGG + chr7_3:48702475-48702494 Msa1107210:intron 30.0%
! TTAACCCTAGATTTTGCAAA+TGG - chr7_3:48702482-48702501 None:intergenic 30.0%
! CCGAAAATAGTCTATTTTAC+AGG - chr7_3:48702519-48702538 None:intergenic 30.0%
! TTTACTCCCTAGGAAATTTT+TGG + chr7_3:48702539-48702558 Msa1107210:intron 30.0%
TCCAAACCAAAAATTTCCTA+GGG - chr7_3:48702548-48702567 None:intergenic 30.0%
TTCCAAACCAAAAATTTCCT+AGG - chr7_3:48702549-48702568 None:intergenic 30.0%
! ATTCTGGATTGTTTTCTAAC+AGG - chr7_3:48702577-48702596 None:intergenic 30.0%
!!! TCCCTAGAAAATTTTTGGTT+TGG - chr7_3:48702701-48702720 None:intergenic 30.0%
!! AAACCAAAAATTTTCTAGGG+AGG + chr7_3:48702700-48702719 Msa1107210:intron 30.0%
! TTACCTCCCTAGAAAATTTT+TGG - chr7_3:48702706-48702725 None:intergenic 30.0%
!! CCTGTAAAATAGGTCATTTT+TGG - chr7_3:48702730-48702749 None:intergenic 30.0%
! CCAAAAATGACCTATTTTAC+AGG + chr7_3:48702727-48702746 Msa1107210:intron 30.0%
AAGTTATCCACAACTCTTTA+AGG + chr7_3:48702810-48702829 Msa1107210:intron 30.0%
AGTTATCCACAACTCTTTAA+GGG + chr7_3:48702811-48702830 Msa1107210:intron 30.0%
! TTCTTTTTACAGTGTTTGAG+TGG + chr7_3:48703017-48703036 Msa1107210:intron 30.0%
TCAAAGACAATTTCTTTGGT+GGG + chr7_3:48703132-48703151 Msa1107210:CDS 30.0%
AATCCAAAAAGCTATGAGTA+CGG - chr7_3:48703186-48703205 None:intergenic 30.0%
ATTATCCAAGGAGAAATCTT+AGG - chr7_3:48703489-48703508 None:intergenic 30.0%
TATAGAGACTATTAGGAGCA+AGG - chr7_3:48701246-48701265 None:intergenic 35.0%
TAATTGAACAAGCTCTACGA+TGG + chr7_3:48701322-48701341 Msa1107210:exon 35.0%
ATCAAATAAGGAAGAGGTGA+AGG + chr7_3:48701346-48701365 Msa1107210:CDS 35.0%
TCTCCACTCTTGTTACAAAT+GGG - chr7_3:48701391-48701410 None:intergenic 35.0%
ATCTCCACTCTTGTTACAAA+TGG - chr7_3:48701392-48701411 None:intergenic 35.0%
GAGATTGCACTAAAACTGAA+GGG + chr7_3:48701407-48701426 Msa1107210:CDS 35.0%
CAGGAACTTTCTTGTAAACA+GGG - chr7_3:48701496-48701515 None:intergenic 35.0%
ACAGGAACTTTCTTGTAAAC+AGG - chr7_3:48701497-48701516 None:intergenic 35.0%
ATCACAAGTGACTCAGATAT+GGG - chr7_3:48701539-48701558 None:intergenic 35.0%
AATCACAAGTGACTCAGATA+TGG - chr7_3:48701540-48701559 None:intergenic 35.0%
TAAGGATCAGAAGGTAAGAT+TGG - chr7_3:48701596-48701615 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG - chr7_3:48701645-48701664 None:intergenic 35.0%
TACACAGAGAAAACAGAAGA+GGG - chr7_3:48701675-48701694 None:intergenic 35.0%
TTACACAGAGAAAACAGAAG+AGG - chr7_3:48701676-48701695 None:intergenic 35.0%
TTAAGGTGGTCCATGTATAA+GGG - chr7_3:48701908-48701927 None:intergenic 35.0%
AATTGTATGTGGGTGTCAAA+GGG - chr7_3:48701941-48701960 None:intergenic 35.0%
CACGTATCACAATTGTATGT+GGG - chr7_3:48701951-48701970 None:intergenic 35.0%
AATGAAACTCATCCAAAGAG+AGG + chr7_3:48701978-48701997 Msa1107210:intron 35.0%
TTACTAAAATACCTCTCACG+TGG + chr7_3:48702020-48702039 Msa1107210:intron 35.0%
TTATGCCTATAGAGAACATG+TGG - chr7_3:48702158-48702177 None:intergenic 35.0%
TAGGCATAAAACAATGAGAG+AGG + chr7_3:48702169-48702188 Msa1107210:intron 35.0%
GAGAGAGGAGAAATAAAGAT+AGG + chr7_3:48702184-48702203 Msa1107210:intron 35.0%
GAGAGGAGAAATAAAGATAG+GGG + chr7_3:48702186-48702205 Msa1107210:intron 35.0%
! TTGCAAAATCTAGGGTTAAC+AGG + chr7_3:48702483-48702502 Msa1107210:intron 35.0%
! TGCAAAATCTAGGGTTAACA+GGG + chr7_3:48702484-48702503 Msa1107210:intron 35.0%
!!! TCCCTAGGAAATTTTTGGTT+TGG + chr7_3:48702544-48702563 Msa1107210:intron 35.0%
ATCCAGAATACCGTCTTAAT+AGG + chr7_3:48702588-48702607 Msa1107210:intron 35.0%
CTGAAAATGGCCTATTAAGA+CGG - chr7_3:48702601-48702620 None:intergenic 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG + chr7_3:48703085-48703104 Msa1107210:CDS 35.0%
GAGCTCAAAGACAATTTCTT+TGG + chr7_3:48703128-48703147 Msa1107210:CDS 35.0%
CTCAAAGACAATTTCTTTGG+TGG + chr7_3:48703131-48703150 Msa1107210:CDS 35.0%
CAAAGACAATTTCTTTGGTG+GGG + chr7_3:48703133-48703152 Msa1107210:CDS 35.0%
CCAAATGCTTCTTGTATAAC+AGG - chr7_3:48703209-48703228 None:intergenic 35.0%
!! CCTGTTATACAAGAAGCATT+TGG + chr7_3:48703206-48703225 Msa1107210:CDS 35.0%
TTGGGTGATTGTTGAATTCT+TGG - chr7_3:48703280-48703299 None:intergenic 35.0%
! GCAGTTTTTCCTTGACAATT+GGG - chr7_3:48703298-48703317 None:intergenic 35.0%
! TTCATAACGAGCTTTGTAGA+AGG - chr7_3:48703342-48703361 None:intergenic 35.0%
! GCTCGTTATGAAAGTCATTT+TGG + chr7_3:48703350-48703369 Msa1107210:CDS 35.0%
TATAGAGACTATTAGGAGCA+AGG - chr7_3:48701246-48701265 None:intergenic 35.0%
TAATTGAACAAGCTCTACGA+TGG + chr7_3:48701322-48701341 Msa1107210:exon 35.0%
ATCAAATAAGGAAGAGGTGA+AGG + chr7_3:48701346-48701365 Msa1107210:CDS 35.0%
TCTCCACTCTTGTTACAAAT+GGG - chr7_3:48701391-48701410 None:intergenic 35.0%
ATCTCCACTCTTGTTACAAA+TGG - chr7_3:48701392-48701411 None:intergenic 35.0%
GAGATTGCACTAAAACTGAA+GGG + chr7_3:48701407-48701426 Msa1107210:CDS 35.0%
CAGGAACTTTCTTGTAAACA+GGG - chr7_3:48701496-48701515 None:intergenic 35.0%
ACAGGAACTTTCTTGTAAAC+AGG - chr7_3:48701497-48701516 None:intergenic 35.0%
ATCACAAGTGACTCAGATAT+GGG - chr7_3:48701539-48701558 None:intergenic 35.0%
AATCACAAGTGACTCAGATA+TGG - chr7_3:48701540-48701559 None:intergenic 35.0%
TAAGGATCAGAAGGTAAGAT+TGG - chr7_3:48701596-48701615 None:intergenic 35.0%
TACCTTGTCATCTATGAACT+TGG - chr7_3:48701645-48701664 None:intergenic 35.0%
TACACAGAGAAAACAGAAGA+GGG - chr7_3:48701675-48701694 None:intergenic 35.0%
TTACACAGAGAAAACAGAAG+AGG - chr7_3:48701676-48701695 None:intergenic 35.0%
TTAAGGTGGTCCATGTATAA+GGG - chr7_3:48701908-48701927 None:intergenic 35.0%
AATTGTATGTGGGTGTCAAA+GGG - chr7_3:48701941-48701960 None:intergenic 35.0%
CACGTATCACAATTGTATGT+GGG - chr7_3:48701951-48701970 None:intergenic 35.0%
AATGAAACTCATCCAAAGAG+AGG + chr7_3:48701978-48701997 Msa1107210:intron 35.0%
TTACTAAAATACCTCTCACG+TGG + chr7_3:48702020-48702039 Msa1107210:intron 35.0%
TTATGCCTATAGAGAACATG+TGG - chr7_3:48702158-48702177 None:intergenic 35.0%
TAGGCATAAAACAATGAGAG+AGG + chr7_3:48702169-48702188 Msa1107210:intron 35.0%
GAGAGAGGAGAAATAAAGAT+AGG + chr7_3:48702184-48702203 Msa1107210:intron 35.0%
GAGAGGAGAAATAAAGATAG+GGG + chr7_3:48702186-48702205 Msa1107210:intron 35.0%
! TTGCAAAATCTAGGGTTAAC+AGG + chr7_3:48702483-48702502 Msa1107210:intron 35.0%
! TGCAAAATCTAGGGTTAACA+GGG + chr7_3:48702484-48702503 Msa1107210:intron 35.0%
!!! TCCCTAGGAAATTTTTGGTT+TGG + chr7_3:48702544-48702563 Msa1107210:intron 35.0%
ATCCAGAATACCGTCTTAAT+AGG + chr7_3:48702588-48702607 Msa1107210:intron 35.0%
CTGAAAATGGCCTATTAAGA+CGG - chr7_3:48702601-48702620 None:intergenic 35.0%
!! GAGTATTGAGGAAACAAAAG+AGG + chr7_3:48703085-48703104 Msa1107210:CDS 35.0%
GAGCTCAAAGACAATTTCTT+TGG + chr7_3:48703128-48703147 Msa1107210:CDS 35.0%
CTCAAAGACAATTTCTTTGG+TGG + chr7_3:48703131-48703150 Msa1107210:CDS 35.0%
CAAAGACAATTTCTTTGGTG+GGG + chr7_3:48703133-48703152 Msa1107210:CDS 35.0%
CCAAATGCTTCTTGTATAAC+AGG - chr7_3:48703209-48703228 None:intergenic 35.0%
!! CCTGTTATACAAGAAGCATT+TGG + chr7_3:48703206-48703225 Msa1107210:CDS 35.0%
TTGGGTGATTGTTGAATTCT+TGG - chr7_3:48703280-48703299 None:intergenic 35.0%
! GCAGTTTTTCCTTGACAATT+GGG - chr7_3:48703298-48703317 None:intergenic 35.0%
! TTCATAACGAGCTTTGTAGA+AGG - chr7_3:48703342-48703361 None:intergenic 35.0%
! GCTCGTTATGAAAGTCATTT+TGG + chr7_3:48703350-48703369 Msa1107210:CDS 35.0%
CTCTACGATGGCATCAAATA+AGG + chr7_3:48701334-48701353 Msa1107210:exon 40.0%
GATGGCATCAAATAAGGAAG+AGG + chr7_3:48701340-48701359 Msa1107210:exon 40.0%
! AAGGAAGAGGTGAAGGTTTT+TGG + chr7_3:48701353-48701372 Msa1107210:CDS 40.0%
!! AGAGGTGAAGGTTTTTGGAT+TGG + chr7_3:48701358-48701377 Msa1107210:CDS 40.0%
AAGCCCATTTGTAACAAGAG+TGG + chr7_3:48701385-48701404 Msa1107210:CDS 40.0%
GGAGATTGCACTAAAACTGA+AGG + chr7_3:48701406-48701425 Msa1107210:CDS 40.0%
! GCTCTTTTGTAAGGATCAGA+AGG - chr7_3:48701605-48701624 None:intergenic 40.0%
GACCAAGTTCATAGATGACA+AGG + chr7_3:48701640-48701659 Msa1107210:CDS 40.0%
ACACAGAGAAAACAGAAGAG+GGG - chr7_3:48701674-48701693 None:intergenic 40.0%
TGAGATCTTAGGTGTGTCTT+TGG + chr7_3:48701756-48701775 Msa1107210:intron 40.0%
GAGATCTTAGGTGTGTCTTT+GGG + chr7_3:48701757-48701776 Msa1107210:intron 40.0%
CTTAAGGTGGTCCATGTATA+AGG - chr7_3:48701909-48701928 None:intergenic 40.0%
TATACATGGACCACCTTAAG+TGG + chr7_3:48701909-48701928 Msa1107210:intron 40.0%
CAATTGTATGTGGGTGTCAA+AGG - chr7_3:48701942-48701961 None:intergenic 40.0%
CCACGTATCACAATTGTATG+TGG - chr7_3:48701952-48701971 None:intergenic 40.0%
CCACATACAATTGTGATACG+TGG + chr7_3:48701949-48701968 Msa1107210:intron 40.0%
TCACACCACATGTTCTCTAT+AGG + chr7_3:48702150-48702169 Msa1107210:intron 40.0%
! CTATTTTCGGTTTACTCCCT+AGG + chr7_3:48702529-48702548 Msa1107210:intron 40.0%
! TATCCACAACTCTTTAAGGG+TGG + chr7_3:48702814-48702833 Msa1107210:intron 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG + chr7_3:48703073-48703092 Msa1107210:CDS 40.0%
TGGCTCCAAATGTAAAGCTT+TGG - chr7_3:48703260-48703279 None:intergenic 40.0%
CAACAATCACCCAATTGTCA+AGG + chr7_3:48703286-48703305 Msa1107210:CDS 40.0%
! GGCAGTTTTTCCTTGACAAT+TGG - chr7_3:48703299-48703318 None:intergenic 40.0%
! AGCTTTGTAGAAGGCCAAAA+GGG - chr7_3:48703333-48703352 None:intergenic 40.0%
TGCAACCTAAGATTTCTCCT+TGG + chr7_3:48703481-48703500 Msa1107210:three_prime_UTR 40.0%
CTCTACGATGGCATCAAATA+AGG + chr7_3:48701334-48701353 Msa1107210:exon 40.0%
GATGGCATCAAATAAGGAAG+AGG + chr7_3:48701340-48701359 Msa1107210:exon 40.0%
! AAGGAAGAGGTGAAGGTTTT+TGG + chr7_3:48701353-48701372 Msa1107210:CDS 40.0%
!! AGAGGTGAAGGTTTTTGGAT+TGG + chr7_3:48701358-48701377 Msa1107210:CDS 40.0%
AAGCCCATTTGTAACAAGAG+TGG + chr7_3:48701385-48701404 Msa1107210:CDS 40.0%
GGAGATTGCACTAAAACTGA+AGG + chr7_3:48701406-48701425 Msa1107210:CDS 40.0%
! GCTCTTTTGTAAGGATCAGA+AGG - chr7_3:48701605-48701624 None:intergenic 40.0%
GACCAAGTTCATAGATGACA+AGG + chr7_3:48701640-48701659 Msa1107210:CDS 40.0%
ACACAGAGAAAACAGAAGAG+GGG - chr7_3:48701674-48701693 None:intergenic 40.0%
TGAGATCTTAGGTGTGTCTT+TGG + chr7_3:48701756-48701775 Msa1107210:intron 40.0%
GAGATCTTAGGTGTGTCTTT+GGG + chr7_3:48701757-48701776 Msa1107210:intron 40.0%
CTTAAGGTGGTCCATGTATA+AGG - chr7_3:48701909-48701928 None:intergenic 40.0%
TATACATGGACCACCTTAAG+TGG + chr7_3:48701909-48701928 Msa1107210:intron 40.0%
CAATTGTATGTGGGTGTCAA+AGG - chr7_3:48701942-48701961 None:intergenic 40.0%
CCACGTATCACAATTGTATG+TGG - chr7_3:48701952-48701971 None:intergenic 40.0%
CCACATACAATTGTGATACG+TGG + chr7_3:48701949-48701968 Msa1107210:intron 40.0%
TCACACCACATGTTCTCTAT+AGG + chr7_3:48702150-48702169 Msa1107210:intron 40.0%
! CTATTTTCGGTTTACTCCCT+AGG + chr7_3:48702529-48702548 Msa1107210:intron 40.0%
! TATCCACAACTCTTTAAGGG+TGG + chr7_3:48702814-48702833 Msa1107210:intron 40.0%
!! AGAACGTGAGAAGAGTATTG+AGG + chr7_3:48703073-48703092 Msa1107210:CDS 40.0%
TGGCTCCAAATGTAAAGCTT+TGG - chr7_3:48703260-48703279 None:intergenic 40.0%
CAACAATCACCCAATTGTCA+AGG + chr7_3:48703286-48703305 Msa1107210:CDS 40.0%
! GGCAGTTTTTCCTTGACAAT+TGG - chr7_3:48703299-48703318 None:intergenic 40.0%
! AGCTTTGTAGAAGGCCAAAA+GGG - chr7_3:48703333-48703352 None:intergenic 40.0%
TGCAACCTAAGATTTCTCCT+TGG + chr7_3:48703481-48703500 Msa1107210:three_prime_UTR 40.0%
!! GGTGAAGGTTTTTGGATTGG+TGG + chr7_3:48701361-48701380 Msa1107210:CDS 45.0%
! CGAGTCAAGGCTCTTTTGTA+AGG - chr7_3:48701614-48701633 None:intergenic 45.0%
! AAAGAGCCTTGACTCGTTTC+TGG + chr7_3:48701618-48701637 Msa1107210:CDS 45.0%
! CAAAGGGTGTATGCCACTTA+AGG - chr7_3:48701925-48701944 None:intergenic 45.0%
CTCATCCAAAGAGAGGATGA+TGG + chr7_3:48701985-48702004 Msa1107210:intron 45.0%
TCACACCATCATCCTCTCTT+TGG - chr7_3:48701993-48702012 None:intergenic 45.0%
ATAGGGGAGAGATGTGAGTT+GGG + chr7_3:48702202-48702221 Msa1107210:intron 45.0%
! AGATGTGAGTTGGGTGGATT+GGG + chr7_3:48702211-48702230 Msa1107210:intron 45.0%
GAACTCTTCTTCGAGAAGAG+TGG - chr7_3:48702297-48702316 None:intergenic 45.0%
GGCCTATTAAGACGGTATTC+TGG - chr7_3:48702593-48702612 None:intergenic 45.0%
ATGCCACCCTTAAAGAGTTG+TGG - chr7_3:48702820-48702839 None:intergenic 45.0%
! CAACTCTTTAAGGGTGGCAT+AGG + chr7_3:48702820-48702839 Msa1107210:intron 45.0%
AGACAATTTCTTTGGTGGGG+AGG + chr7_3:48703136-48703155 Msa1107210:CDS 45.0%
! CTGCCGTACTCATAGCTTTT+TGG + chr7_3:48703180-48703199 Msa1107210:CDS 45.0%
! GAGCTTTGTAGAAGGCCAAA+AGG - chr7_3:48703334-48703353 None:intergenic 45.0%
!! GGTGAAGGTTTTTGGATTGG+TGG + chr7_3:48701361-48701380 Msa1107210:CDS 45.0%
! CGAGTCAAGGCTCTTTTGTA+AGG - chr7_3:48701614-48701633 None:intergenic 45.0%
! AAAGAGCCTTGACTCGTTTC+TGG + chr7_3:48701618-48701637 Msa1107210:CDS 45.0%
! CAAAGGGTGTATGCCACTTA+AGG - chr7_3:48701925-48701944 None:intergenic 45.0%
CTCATCCAAAGAGAGGATGA+TGG + chr7_3:48701985-48702004 Msa1107210:intron 45.0%
TCACACCATCATCCTCTCTT+TGG - chr7_3:48701993-48702012 None:intergenic 45.0%
ATAGGGGAGAGATGTGAGTT+GGG + chr7_3:48702202-48702221 Msa1107210:intron 45.0%
! AGATGTGAGTTGGGTGGATT+GGG + chr7_3:48702211-48702230 Msa1107210:intron 45.0%
GAACTCTTCTTCGAGAAGAG+TGG - chr7_3:48702297-48702316 None:intergenic 45.0%
GGCCTATTAAGACGGTATTC+TGG - chr7_3:48702593-48702612 None:intergenic 45.0%
ATGCCACCCTTAAAGAGTTG+TGG - chr7_3:48702820-48702839 None:intergenic 45.0%
! CAACTCTTTAAGGGTGGCAT+AGG + chr7_3:48702820-48702839 Msa1107210:intron 45.0%
AGACAATTTCTTTGGTGGGG+AGG + chr7_3:48703136-48703155 Msa1107210:CDS 45.0%
! CTGCCGTACTCATAGCTTTT+TGG + chr7_3:48703180-48703199 Msa1107210:CDS 45.0%
! GAGCTTTGTAGAAGGCCAAA+AGG - chr7_3:48703334-48703353 None:intergenic 45.0%
CTTGGTCCAGAAACGAGTCA+AGG - chr7_3:48701627-48701646 None:intergenic 50.0%
! AGGGTGTATGCCACTTAAGG+TGG - chr7_3:48701922-48701941 None:intergenic 50.0%
CATGTACACTTCCACGTGAG+AGG - chr7_3:48702034-48702053 None:intergenic 50.0%
! CACGTGGAAGTGTACATGAG+AGG + chr7_3:48702036-48702055 Msa1107210:intron 50.0%
GATAGGGGAGAGATGTGAGT+TGG + chr7_3:48702201-48702220 Msa1107210:intron 50.0%
! GAGATGTGAGTTGGGTGGAT+TGG + chr7_3:48702210-48702229 Msa1107210:intron 50.0%
!! GATGTGAGTTGGGTGGATTG+GGG + chr7_3:48702212-48702231 Msa1107210:intron 50.0%
!! TTGGGTGGATTGGGGTTTGT+TGG + chr7_3:48702220-48702239 Msa1107210:intron 50.0%
!! TGGGTGGATTGGGGTTTGTT+GGG + chr7_3:48702221-48702240 Msa1107210:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG + chr7_3:48703143-48703162 Msa1107210:CDS 50.0%
AAGGCCAAAAGGGTCTCTCT+AGG - chr7_3:48703323-48703342 None:intergenic 50.0%
CTTGGTCCAGAAACGAGTCA+AGG - chr7_3:48701627-48701646 None:intergenic 50.0%
! AGGGTGTATGCCACTTAAGG+TGG - chr7_3:48701922-48701941 None:intergenic 50.0%
CATGTACACTTCCACGTGAG+AGG - chr7_3:48702034-48702053 None:intergenic 50.0%
! CACGTGGAAGTGTACATGAG+AGG + chr7_3:48702036-48702055 Msa1107210:intron 50.0%
GATAGGGGAGAGATGTGAGT+TGG + chr7_3:48702201-48702220 Msa1107210:intron 50.0%
! GAGATGTGAGTTGGGTGGAT+TGG + chr7_3:48702210-48702229 Msa1107210:intron 50.0%
!! GATGTGAGTTGGGTGGATTG+GGG + chr7_3:48702212-48702231 Msa1107210:intron 50.0%
!! TTGGGTGGATTGGGGTTTGT+TGG + chr7_3:48702220-48702239 Msa1107210:intron 50.0%
!! TGGGTGGATTGGGGTTTGTT+GGG + chr7_3:48702221-48702240 Msa1107210:intron 50.0%
TTCTTTGGTGGGGAGGAGAT+TGG + chr7_3:48703143-48703162 Msa1107210:CDS 50.0%
AAGGCCAAAAGGGTCTCTCT+AGG - chr7_3:48703323-48703342 None:intergenic 50.0%
!! GGGTGGATTGGGGTTTGTTG+GGG + chr7_3:48702222-48702241 Msa1107210:intron 55.0%
!! GGTGGATTGGGGTTTGTTGG+GGG + chr7_3:48702223-48702242 Msa1107210:intron 55.0%
!! ATTGGGGTTTGTTGGGGGCA+GGG + chr7_3:48702228-48702247 Msa1107210:intron 55.0%
! GCCTCCTAGAGAGACCCTTT+TGG + chr7_3:48703316-48703335 Msa1107210:CDS 55.0%
GCCAAAAGGGTCTCTCTAGG+AGG - chr7_3:48703320-48703339 None:intergenic 55.0%
!! GGGTGGATTGGGGTTTGTTG+GGG + chr7_3:48702222-48702241 Msa1107210:intron 55.0%
!! GGTGGATTGGGGTTTGTTGG+GGG + chr7_3:48702223-48702242 Msa1107210:intron 55.0%
!! ATTGGGGTTTGTTGGGGGCA+GGG + chr7_3:48702228-48702247 Msa1107210:intron 55.0%
! GCCTCCTAGAGAGACCCTTT+TGG + chr7_3:48703316-48703335 Msa1107210:CDS 55.0%
GCCAAAAGGGTCTCTCTAGG+AGG - chr7_3:48703320-48703339 None:intergenic 55.0%
! GGGGAGAGATGTGAGTTGGG+TGG + chr7_3:48702205-48702224 Msa1107210:intron 60.0%
!! GATTGGGGTTTGTTGGGGGC+AGG + chr7_3:48702227-48702246 Msa1107210:intron 60.0%
! GGGGAGAGATGTGAGTTGGG+TGG + chr7_3:48702205-48702224 Msa1107210:intron 60.0%
!! GATTGGGGTTTGTTGGGGGC+AGG + chr7_3:48702227-48702246 Msa1107210:intron 60.0%
!! GGTTTGTTGGGGGCAGGGCA+GGG + chr7_3:48702233-48702252 Msa1107210:intron 65.0%
! GTTTGTTGGGGGCAGGGCAG+GGG + chr7_3:48702234-48702253 Msa1107210:intron 65.0%
TTTGTTGGGGGCAGGGCAGG+GGG + chr7_3:48702235-48702254 Msa1107210:intron 65.0%
!! GGTTTGTTGGGGGCAGGGCA+GGG + chr7_3:48702233-48702252 Msa1107210:intron 65.0%
! GTTTGTTGGGGGCAGGGCAG+GGG + chr7_3:48702234-48702253 Msa1107210:intron 65.0%
TTTGTTGGGGGCAGGGCAGG+GGG + chr7_3:48702235-48702254 Msa1107210:intron 65.0%
!! GGGTTTGTTGGGGGCAGGGC+AGG + chr7_3:48702232-48702251 Msa1107210:intron 70.0%
!! GGGTTTGTTGGGGGCAGGGC+AGG + chr7_3:48702232-48702251 Msa1107210:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 48701156 48703542 48701156 ID=Msa1107210;Name=Msa1107210
chr7_3 mRNA 48701156 48703542 48701156 ID=Msa1107210-mRNA-1;Parent=Msa1107210;Name=Msa1107210-mRNA-1;_AED=0.30;_eAED=0.30;_QI=185|1|1|1|1|1|2|160|224
chr7_3 exon 48701156 48701661 48701156 ID=Msa1107210-mRNA-1:exon:9911;Parent=Msa1107210-mRNA-1
chr7_3 exon 48703029 48703542 48703029 ID=Msa1107210-mRNA-1:exon:9912;Parent=Msa1107210-mRNA-1
chr7_3 five_prime_UTR 48701156 48701340 48701156 ID=Msa1107210-mRNA-1:five_prime_utr;Parent=Msa1107210-mRNA-1
chr7_3 CDS 48701341 48701661 48701341 ID=Msa1107210-mRNA-1:cds;Parent=Msa1107210-mRNA-1
chr7_3 CDS 48703029 48703382 48703029 ID=Msa1107210-mRNA-1:cds;Parent=Msa1107210-mRNA-1
chr7_3 three_prime_UTR 48703383 48703542 48703383 ID=Msa1107210-mRNA-1:three_prime_utr;Parent=Msa1107210-mRNA-1
Gene Sequence

>Msa1107210

ATGGCATCAAATAAGGAAGAGGTGAAGGTTTTTGGATTGGTGGAAAGCCCATTTGTAACAAGAGTGGAGATTGCACTAAAACTGAAGGGAGTTGAATACAAATACGAGAAAGAGAAGTTTAGGAACTTGAGTGATACACTCAAAAAATACAACCCTGTTTACAAGAAAGTTCCTGTTTTTATTCATAATGATAAGCCCATATCTGAGTCACTTGTGATTCTTGAGTATATTGATGAGACTTGGAAACAAAATCCAATCTTACCTTCTGATCCTTACAAAAGAGCCTTGACTCGTTTCTGGACCAAGTTCATAGATGACAAGTGTTTGAGTGGTGTACTGAAAGCTTGTTTCACTCTTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAACAAAAGAGGCTCTTCAATTTCTTGAGAATGAGCTCAAAGACAATTTCTTTGGTGGGGAGGAGATTGGCTTTGTTGACATTGCTGCCGTACTCATAGCTTTTTGGATTCCTGTTATACAAGAAGCATTTGGACTGAAATTATTCACTAGTGAAGAATTTCCAAAGCTTTACATTTGGAGCCAAGAATTCAACAATCACCCAATTGTCAAGGAAAAACTGCCTCCTAGAGAGACCCTTTTGGCCTTCTACAAAGCTCGTTATGAAAGTCATTTTGGTTCAAAATAG
Protein sequence

>Msa1107210

MASNKEEVKVFGLVESPFVTRVEIALKLKGVEYKYEKEKFRNLSDTLKKYNPVYKKVPVFIHNDKPISESLVILEYIDETWKQNPILPSDPYKRALTRFWTKFIDDKCLSGVLKACFTLDEKEREKSIEETKEALQFLENELKDNFFGGEEIGFVDIAAVLIAFWIPVIQEAFGLKLFTSEEFPKLYIWSQEFNNHPIVKEKLPPRETLLAFYKARYESHFGSK*