AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1063120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063120 MtrunA17_Chr7g0242011 70.755 530 142 5 181 708 31 549 0.0 755
Msa1063120 MtrunA17_Chr7g0242011 54.802 177 73 3 5 174 39 215 7.42e-54 194
Msa1063120 MtrunA17_Chr7g0242181 63.128 537 174 9 187 708 10 537 0.0 643
Msa1063120 MtrunA17_Chr7g0242181 60.000 205 75 2 8 205 15 219 1.94e-68 234
Msa1063120 MtrunA17_Chr7g0242101 54.366 607 177 12 191 708 2 597 0.0 578
Msa1063120 MtrunA17_Chr7g0242101 56.571 175 55 3 10 163 5 179 4.23e-50 184
Msa1063120 MtrunA17_Chr7g0242101 47.761 67 35 0 139 205 229 295 6.72e-11 65.5
Msa1063120 MtrunA17_Chr7g0242151 52.803 553 208 8 193 708 9 545 0.0 542
Msa1063120 MtrunA17_Chr7g0242151 73.034 178 44 1 1 174 1 178 2.46e-79 263
Msa1063120 MtrunA17_Chr7g0242091 52.793 555 210 13 187 708 28 563 0.0 528
Msa1063120 MtrunA17_Chr7g0242091 71.038 183 44 2 1 174 26 208 1.02e-74 251
Msa1063120 MtrunA17_Chr7g0242051 52.099 524 220 10 187 694 3 511 7.19e-170 497
Msa1063120 MtrunA17_Chr7g0242051 55.367 177 72 3 1 170 1 177 8.30e-52 187
Msa1063120 MtrunA17_Chr7g0242071 50.274 547 233 17 189 708 5 539 7.51e-159 469
Msa1063120 MtrunA17_Chr7g0242071 94.253 174 10 0 1 174 1 174 5.50e-109 341
Msa1063120 MtrunA17_Chr7g0241791 46.442 534 212 19 191 708 1 476 8.96e-129 390
Msa1063120 MtrunA17_Chr7g0241791 49.268 205 76 5 10 205 4 189 8.66e-45 167
Msa1063120 MtrunA17_Chr7g0241951 43.462 543 255 17 193 708 7 524 4.41e-118 364
Msa1063120 MtrunA17_Chr7g0241951 48.768 203 84 6 9 192 7 208 9.57e-44 165
Msa1063120 MtrunA17_Chr3g0107251 36.007 536 268 14 185 708 2 474 2.47e-87 282
Msa1063120 MtrunA17_Chr3g0107251 48.214 168 83 3 10 174 11 177 6.28e-38 147
Msa1063120 MtrunA17_Chr3g0091831 34.879 539 266 15 183 707 13 480 3.22e-83 271
Msa1063120 MtrunA17_Chr3g0091831 47.337 169 85 3 9 174 23 190 3.28e-38 148
Msa1063120 MtrunA17_Chr7g0241971 53.171 205 89 3 506 708 166 365 2.18e-63 215
Msa1063120 MtrunA17_Chr7g0241971 53.797 158 60 6 14 159 1 157 2.21e-40 152
Msa1063120 MtrunA17_Chr7g0241971 53.165 158 68 5 198 350 1 157 5.60e-40 150
Msa1063120 MtrunA17_Chr1g0170351 30.896 547 263 21 194 704 8 475 8.72e-59 206
Msa1063120 MtrunA17_Chr1g0170351 37.766 188 91 6 10 174 8 192 1.19e-22 102
Msa1063120 MtrunA17_Chr7g0242001 36.713 286 113 7 442 708 8 244 7.41e-44 158
Msa1063120 MtrunA17_Chr7g0242131 57.627 118 44 1 25 136 13 130 7.89e-40 142
Msa1063120 MtrunA17_Chr7g0242131 58.824 119 48 1 208 326 12 129 2.38e-38 138
Msa1063120 MtrunA17_Chr7g0242121 44.094 127 62 3 478 599 3 125 1.04e-23 97.4
Msa1063120 MtrunA17_Chr4g0006051 39.394 165 81 3 10 167 9 161 5.67e-20 87.4
Msa1063120 MtrunA17_Chr4g0006051 35.632 174 82 6 194 358 9 161 1.15e-17 80.9
Msa1063120 MtrunA17_Chr4g0006121 24.528 371 169 14 362 700 14 305 1.74e-18 87.0
Msa1063120 MtrunA17_Chr4g0006091 31.000 200 85 5 525 700 194 364 7.17e-17 83.2
Msa1063120 MtrunA17_Chr4g0006091 29.557 203 99 9 277 466 22 193 4.02e-12 68.6
Msa1063120 MtrunA17_Chr5g0439661 32.727 165 95 6 214 371 29 184 7.81e-17 79.7
Msa1063120 MtrunA17_Chr5g0439661 30.323 155 99 4 27 174 26 178 3.94e-14 72.0
Msa1063120 MtrunA17_Chr7g0265891 36.552 145 80 3 34 174 56 192 1.54e-16 82.8
Msa1063120 MtrunA17_Chr7g0265891 31.902 163 100 5 212 374 50 201 5.97e-13 71.6
Msa1063120 MtrunA17_Chr5g0439721 24.903 514 276 22 203 705 22 436 2.53e-15 79.0
Msa1063120 MtrunA17_Chr5g0439721 30.247 162 104 5 19 174 22 180 8.60e-11 64.7
Msa1063120 MtrunA17_Chr3g0118601 33.158 190 112 6 186 374 13 188 9.73e-15 77.4
Msa1063120 MtrunA17_Chr3g0118601 31.953 169 107 3 9 176 20 181 3.16e-13 72.4
Msa1063120 MtrunA17_Chr6g0452601 32.886 149 89 2 34 182 30 167 2.25e-13 72.8
Msa1063120 MtrunA17_Chr2g0297831 26.953 256 166 8 211 461 65 304 8.38e-13 71.6
Msa1063120 MtrunA17_Chr6g0452531 33.108 148 88 3 34 181 30 166 1.09e-12 70.5
Msa1063120 MtrunA17_Chr2g0300311 31.579 152 94 3 27 175 48 192 1.82e-12 70.5
Msa1063120 MtrunA17_Chr2g0300311 22.290 489 278 17 211 688 48 445 6.40e-11 65.5
Msa1063120 MtrunA17_Chr8g0335011 25.641 312 198 11 30 315 37 340 2.36e-12 70.1
Msa1063120 MtrunA17_Chr5g0401791 30.178 169 107 5 8 168 76 241 3.82e-12 69.3
Msa1063120 MtrunA17_Chr6g0452551 31.081 148 91 3 34 181 30 166 7.22e-12 68.2
Msa1063120 MtrunA17_Chr6g0452591 31.395 172 107 3 4 174 30 191 2.02e-11 67.0
Msa1063120 MtrunA17_Chr6g0452501 28.977 176 114 3 6 181 2 166 2.03e-11 66.6
Msa1063120 MtrunA17_Chr6g0452561 29.143 175 117 2 8 181 4 172 3.10e-11 66.2
Msa1063120 MtrunA17_Chr6g0457371 30.114 176 110 3 8 182 4 167 7.03e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1063120 AT4G31980.1 30.204 245 139 7 31 253 295 529 2.51e-19 93.2
Msa1063120 AT4G31980.1 28.351 194 120 8 185 373 263 442 2.97e-12 70.5
Msa1063120 AT5G11290.2 35.897 156 91 4 35 187 39 188 5.63e-17 84.3
Msa1063120 AT5G11290.2 32.727 165 98 6 212 375 32 184 2.04e-12 70.1
Msa1063120 AT3G50160.1 22.846 534 297 22 184 707 71 499 1.91e-15 80.1
Msa1063120 AT3G50160.1 28.221 163 112 3 31 191 106 265 1.35e-14 77.4
Msa1063120 AT3G50170.1 30.114 176 114 4 5 174 85 257 2.43e-15 80.1
Msa1063120 AT3G50170.1 30.102 196 119 8 183 371 79 263 5.03e-12 69.3
Msa1063120 AT3G50170.2 30.114 176 114 4 5 174 85 257 4.12e-15 78.6
Msa1063120 AT3G50170.2 30.102 196 119 8 183 371 79 263 4.69e-12 69.3
Msa1063120 AT3G50180.1 29.545 176 115 4 5 174 150 322 1.11e-14 78.2
Msa1063120 AT3G50180.1 22.925 506 272 22 218 707 183 586 4.10e-11 66.6
Msa1063120 AT2G36430.1 33.735 166 97 4 30 190 46 203 1.43e-14 77.0
Msa1063120 AT2G36430.1 34.177 158 92 6 212 368 44 190 5.57e-13 72.0
Msa1063120 AT3G47210.1 34.459 148 94 2 27 174 91 235 1.77e-14 77.0
Msa1063120 AT3G47210.1 33.333 159 94 5 211 368 91 238 1.14e-12 71.2
Msa1063120 AT3G50130.1 28.571 175 116 4 6 174 112 283 2.64e-14 77.0
Msa1063120 AT3G50130.1 23.791 517 281 23 171 660 93 523 2.49e-13 73.6
Msa1063120 AT3G50150.1 30.114 176 113 6 6 174 63 235 3.78e-14 76.3
Msa1063120 AT3G50150.2 30.114 176 113 6 6 174 63 235 4.63e-14 75.5
Msa1063120 AT3G47250.3 33.557 149 83 6 34 174 66 206 2.50e-13 73.6
Msa1063120 AT3G47250.3 31.847 157 100 4 212 368 60 209 9.33e-13 71.6
Msa1063120 AT3G47250.2 33.557 149 83 6 34 174 66 206 2.50e-13 73.6
Msa1063120 AT3G47250.2 31.847 157 100 4 212 368 60 209 9.33e-13 71.6
Msa1063120 AT3G47250.1 33.557 149 83 6 34 174 66 206 2.50e-13 73.6
Msa1063120 AT3G47250.1 31.847 157 100 4 212 368 60 209 9.33e-13 71.6
Msa1063120 AT3G50140.1 28.889 180 109 6 6 174 86 257 5.00e-13 72.8
Msa1063120 AT3G50140.2 28.889 180 109 6 6 174 86 257 6.59e-13 71.6
Msa1063120 AT3G50140.2 27.751 209 131 9 171 371 67 263 8.05e-11 65.1
Msa1063120 AT5G22560.1 25.726 241 121 9 211 423 45 255 1.05e-12 71.6
Msa1063120 AT3G50120.1 26.857 175 119 5 6 174 76 247 1.54e-12 71.2
Msa1063120 AT5G22550.2 31.056 161 96 5 213 368 44 194 1.54e-12 70.9
Msa1063120 AT5G22550.2 31.788 151 91 5 31 174 46 191 7.61e-12 68.9
Msa1063120 AT3G50190.4 27.941 204 125 8 6 198 69 261 6.03e-12 68.6
Msa1063120 AT3G50190.3 27.941 204 125 8 6 198 69 261 6.03e-12 68.6
Msa1063120 AT3G50190.1 27.941 204 125 8 6 198 69 261 6.52e-12 68.9
Msa1063120 AT3G50190.2 27.941 204 125 8 6 198 69 261 7.78e-12 67.8

Find 133 sgRNAs with CRISPR-Local

Find 484 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACATTCCCGAAAGTATTT+TGG 0.103092 7_2:-54617748 None:intergenic
AAAATTGGAGAGCAATTATT+TGG 0.139869 7_2:-54619048 None:intergenic
TTCCTTGCTTCCCTTGAATC+TGG 0.157672 7_2:-54617647 None:intergenic
GTTCATGTCGTTCGAGTTTA+AGG 0.177532 7_2:-54612271 None:intergenic
AATTATGTAGTGCCCATTAT+TGG 0.242750 7_2:+54618246 Msa1063120:CDS
GATGAGTTTATAAGCTCTTC+TGG 0.249835 7_2:-54617583 None:intergenic
AGAGCAATTATTTGGGTAAA+TGG 0.263602 7_2:-54619040 None:intergenic
CCACTTTGCTTTCGTTGTTT+TGG 0.269443 7_2:-54618532 None:intergenic
CGATGCACAGCGCTTTAGTT+TGG 0.278833 7_2:-54618286 None:intergenic
TCCTTGCTTCCCTTGAATCT+GGG 0.295775 7_2:-54617646 None:intergenic
AGTTTCCTTCGGAACTGTTT+TGG 0.297529 7_2:+54618375 Msa1063120:CDS
CAACTTATGAAGAACCAAAA+AGG 0.306164 7_2:-54612459 None:intergenic
ATAGCTCAGTACTTGATAAT+TGG 0.310485 7_2:-54617452 None:intergenic
CGGATGCTGAGTACCAATAA+TGG 0.336333 7_2:-54618259 None:intergenic
AAGCAGCCGAAGTAAATTTC+CGG 0.336936 7_2:-54618668 None:intergenic
ATGTCGTTTGGAGTTGATCT+TGG 0.340412 7_2:+54618807 Msa1063120:CDS
AGGATTCCCCAAAATACTTT+CGG 0.342439 7_2:+54617740 Msa1063120:CDS
GGATTCCCCAAAATACTTTC+GGG 0.343695 7_2:+54617741 Msa1063120:CDS
TCTGTCTGATCTTATGTTGT+TGG 0.354069 7_2:+54617975 Msa1063120:CDS
GATGCACAGCGCTTTAGTTT+GGG 0.358635 7_2:-54618285 None:intergenic
CGGGACTGGGTGAGCGCAAC+CGG 0.361158 7_2:-54617924 None:intergenic
TCTTTCAGCACTTCAGTTGC+GGG 0.363880 7_2:-54612392 None:intergenic
GTTTCCTGAACCAGAGTATC+TGG 0.365315 7_2:+54618056 Msa1063120:CDS
GATGCGTCGGAAGAAGTTAA+AGG 0.369006 7_2:+54618450 Msa1063120:CDS
TCCTCCAGATACTCTGGTTC+AGG 0.370650 7_2:-54618060 None:intergenic
TTGCCAAAGGTGGTTTCAAT+TGG 0.371491 7_2:+54617622 Msa1063120:CDS
AATATTTCTGCTGCTGAGTC+CGG 0.384543 7_2:+54618606 Msa1063120:CDS
CAACTTTGTTGCTGCGATGC+TGG 0.390466 7_2:+54618974 Msa1063120:CDS
CAGCGCTTTAGTTTGGGCTT+CGG 0.392249 7_2:-54618279 None:intergenic
TTGGAGCTTGTGATTACAAA+AGG 0.400184 7_2:+54617880 Msa1063120:CDS
TTGTTCATCTGATTTCCATA+TGG 0.401326 7_2:-54617776 None:intergenic
ACTCGCTAAAATTATGTTAG+TGG 0.401396 7_2:+54612292 Msa1063120:CDS
GGTCCGATCGACACCTTCCT+TGG 0.402506 7_2:-54612092 None:intergenic
GCATCGAGGCTCCAAGCTGC+GGG 0.410049 7_2:+54618303 Msa1063120:CDS
CAGCACTTTAGATGCGGGAC+TGG 0.410243 7_2:-54617938 None:intergenic
AATCTTATTCTGTCTATCAT+AGG 0.412582 7_2:+54618111 Msa1063120:CDS
AAAGTATTTGTGACAATTTG+TGG 0.414090 7_2:-54618023 None:intergenic
TCTCTCTGATCTAATGTTGT+TGG 0.420281 7_2:+54612424 Msa1063120:CDS
ATTCTTGCTTTAGTTTCCTT+CGG 0.421186 7_2:+54618364 Msa1063120:CDS
TGTCGTTTGGAGTTGATCTT+GGG 0.424671 7_2:+54618808 Msa1063120:CDS
TCTGGTTCAGGAAACTCATC+AGG 0.435088 7_2:-54618048 None:intergenic
GTCGATCGGACCAAGACTTA+GGG 0.439863 7_2:+54612103 Msa1063120:CDS
GTCTTTCAGCACTTCAGTTG+CGG 0.445325 7_2:-54612393 None:intergenic
TGAGGAGCTTTGAAGTAGCT+TGG 0.446027 7_2:-54618159 None:intergenic
AGCAATGCAGTGATGCCGTT+TGG 0.447542 7_2:+54612210 Msa1063120:CDS
CTGGTTATTGTTATTGCTCC+CGG 0.448966 7_2:-54618625 None:intergenic
TCTCTCCTTCCCCTAAGTCT+TGG 0.449742 7_2:-54612113 None:intergenic
GGGAATGTGGTGAAGCCATA+TGG 0.451325 7_2:+54617761 Msa1063120:CDS
GGGGTGACTATCAAACTTGC+TGG 0.452004 7_2:+54618324 Msa1063120:CDS
GGTCCAATTGAAACCACCTT+TGG 0.458694 7_2:-54617625 None:intergenic
AGCACTTCAGTTGCGGGACT+AGG 0.460537 7_2:-54612386 None:intergenic
AAATTGGAGAGCAATTATTT+GGG 0.465642 7_2:-54619047 None:intergenic
CTAGACGACCCTTGAAAAGA+TGG 0.466154 7_2:-54618920 None:intergenic
CGGGACTAGGCGGAAATAAA+CGG 0.469546 7_2:-54612373 None:intergenic
AATTTGTGGAGTACTAGAAT+TGG 0.470241 7_2:-54618009 None:intergenic
GGCTGATGTGAAGCTTCTTA+AGG 0.471004 7_2:+54618719 Msa1063120:CDS
TGCATCGAGGCTCCAAGCTG+CGG 0.472055 7_2:+54618302 Msa1063120:CDS
CTCTTTATCTAATTCCCAAA+CGG 0.472699 7_2:-54612225 None:intergenic
TGACCTCTTCCATAAGCAAA+AGG 0.472777 7_2:-54612139 None:intergenic
GCAATGCAGTGATGCCGTTT+GGG 0.474184 7_2:+54612211 Msa1063120:CDS
TTCAATTGGACCCAGATTCA+AGG 0.475388 7_2:+54617636 Msa1063120:CDS
GGATGCTGAGTACCAATAAT+GGG 0.478354 7_2:-54618258 None:intergenic
CAAGGAAGACTTAAATCTCA+TGG 0.484583 7_2:+54617663 Msa1063120:CDS
CCAAAATACTTTCGGGAATG+TGG 0.487269 7_2:+54617748 Msa1063120:CDS
TAAACTAGAAAAGAAAGAAC+TGG 0.490203 7_2:+54617825 Msa1063120:CDS
AGCACTTTAGATGCGGGACT+GGG 0.500163 7_2:-54617937 None:intergenic
TTCATGTCCTCCAGATACTC+TGG 0.501188 7_2:-54618066 None:intergenic
TTCGTTGTTAGATTGGCCAT+TGG 0.501215 7_2:-54611948 None:intergenic
GAGGTTCGTGAATGCTATCT+AGG 0.501247 7_2:+54612245 Msa1063120:CDS
GTGGCGCAATATCATTGCTT+GGG 0.504157 7_2:+54618551 Msa1063120:CDS
ATATTTCTGCTGCTGAGTCC+GGG 0.505052 7_2:+54618607 Msa1063120:CDS
ATGAAACCAACATGAATGAA+TGG 0.505061 7_2:+54617488 Msa1063120:CDS
TTGGAGCTTCTCATATCAAA+GGG 0.506468 7_2:+54612329 Msa1063120:CDS
CAATTATTTGGGTAAATGGT+AGG 0.512646 7_2:-54619036 None:intergenic
GTTGGAGCTTCTCATATCAA+AGG 0.513413 7_2:+54612328 Msa1063120:CDS
CGTTTGGGAATTAGATAAAG+AGG 0.516845 7_2:+54612226 Msa1063120:CDS
AGTGGCGCAATATCATTGCT+TGG 0.516886 7_2:+54618550 Msa1063120:CDS
GGTGGTATATGCATAAGGCT+TGG 0.519611 7_2:+54618396 Msa1063120:CDS
GAAGATGAGTAACCAGGAGT+TGG 0.521189 7_2:+54618767 Msa1063120:CDS
CCTTTCAGCACTTTAGATGC+GGG 0.522193 7_2:-54617943 None:intergenic
TGGACAATATCAAGAATATG+AGG 0.523753 7_2:-54618177 None:intergenic
ATTTAACCATTCATTCATGT+TGG 0.524785 7_2:-54617494 None:intergenic
GCTAAAATTATGTTAGTGGA+TGG 0.528406 7_2:+54612296 Msa1063120:CDS
AGGGGAAATTTGAAATTGCA+CGG 0.529036 7_2:+54618499 Msa1063120:CDS
CGATGGATTGGTTTGTTGTG+CGG 0.530353 7_2:+54618698 Msa1063120:CDS
TACTGAGCTATGACGAAGCA+AGG 0.535193 7_2:+54617464 Msa1063120:CDS
TATAAGCTCTTCTGGAACGA+TGG 0.541637 7_2:-54617575 None:intergenic
GCCTTTCAGCACTTTAGATG+CGG 0.543213 7_2:-54617944 None:intergenic
TTTACTTCAACTTCGAAAAG+GGG 0.546532 7_2:+54618481 Msa1063120:CDS
TGGAGCTTGTGATTACAAAA+GGG 0.550907 7_2:+54617881 Msa1063120:CDS
TAACCGAGCAGATAAAAGCT+TGG 0.557279 7_2:+54612187 Msa1063120:CDS
CTAGGCGGAAATAAACGGCT+TGG 0.559922 7_2:-54612368 None:intergenic
ATGTACCTGTTACATCGAGC+AGG 0.561447 7_2:+54617709 Msa1063120:CDS
TAGACGACCCTTGAAAAGAT+GGG 0.562920 7_2:-54618919 None:intergenic
TCAATTCTAAACTTCCAAGC+CGG 0.569732 7_2:+54617905 Msa1063120:CDS
TCAATTGGACCCAGATTCAA+GGG 0.572141 7_2:+54617637 Msa1063120:CDS
TCAATACGAGTAGTCTCAGC+CGG 0.574192 7_2:+54618649 Msa1063120:CDS
ACGAGGATGCTTACATTCCA+AGG 0.576926 7_2:+54612075 Msa1063120:CDS
TGTCACAACTAATACTCAAG+TGG 0.587034 7_2:+54618428 Msa1063120:CDS
AGAGTATCTGGAGGACATGA+AGG 0.590404 7_2:+54618068 Msa1063120:CDS
AACATTTCAGTGGTTCCAGA+AGG 0.592202 7_2:+54612038 Msa1063120:CDS
AGAAGATTACTTGCCAAAGG+TGG 0.592232 7_2:+54617612 Msa1063120:CDS
TCTCAGCCGGAAATTTACTT+CGG 0.593853 7_2:+54618662 Msa1063120:CDS
TCAATCAAACAACATTTCAG+TGG 0.595841 7_2:+54612028 Msa1063120:CDS
CATCGAGGCTCCAAGCTGCG+GGG 0.597386 7_2:+54618304 Msa1063120:CDS
CGGGAGCAATAACAATAACC+AGG 0.600826 7_2:+54618626 Msa1063120:CDS
TACCACCAAAACAGTTCCGA+AGG 0.600989 7_2:-54618380 None:intergenic
TCATTTGAAGATGAGTAACC+AGG 0.601874 7_2:+54618761 Msa1063120:CDS
TAATACTCAAGTGGATGCGT+CGG 0.602123 7_2:+54618437 Msa1063120:CDS
CAAAGAAGATTACTTGCCAA+AGG 0.603335 7_2:+54617609 Msa1063120:CDS
ATCGAGGCTCCAAGCTGCGG+GGG 0.604953 7_2:+54618305 Msa1063120:CDS
ACCCAGATTCAAGGGAAGCA+AGG 0.605695 7_2:+54617645 Msa1063120:CDS
CAGTACTTGATAATTGGCCA+TGG 0.606800 7_2:-54617446 None:intergenic
ATTCCAAGGAAGGTGTCGAT+CGG 0.608635 7_2:+54612089 Msa1063120:CDS
AAGATCAACTCCAAACGACA+TGG 0.610920 7_2:-54618805 None:intergenic
CCCGCATCTAAAGTGCTGAA+AGG 0.612719 7_2:+54617943 Msa1063120:CDS
ACATCGAGCAGGAGAGCCGA+AGG 0.618803 7_2:+54617720 Msa1063120:CDS
GGATGCTTACATTCCAAGGA+AGG 0.619571 7_2:+54612079 Msa1063120:CDS
AGACATGTTGCTGACATCTG+TGG 0.620624 7_2:+54617522 Msa1063120:CDS
TCGGACCAAGACTTAGGGGA+AGG 0.620671 7_2:+54612108 Msa1063120:CDS
CCAAAACAACGAAAGCAAAG+TGG 0.622805 7_2:+54618532 Msa1063120:CDS
CTGGTTCAGGAAACTCATCA+GGG 0.632133 7_2:-54618047 None:intergenic
TAAGGACAAGAATATCATTG+TGG 0.634655 7_2:+54618737 Msa1063120:CDS
TATCTGGAGGACATGAAGGA+CGG 0.644767 7_2:+54618072 Msa1063120:CDS
TCGATCGGACCAAGACTTAG+GGG 0.644900 7_2:+54612104 Msa1063120:CDS
ATCTAACAACGAAAAGTGAG+TGG 0.647566 7_2:+54611958 Msa1063120:CDS
ACTTCAGTTGCGGGACTAGG+CGG 0.657563 7_2:-54612383 None:intergenic
TGAGACTACTCGTATTGACC+TGG 0.658636 7_2:-54618644 None:intergenic
ACTGAGCTATGACGAAGCAA+GGG 0.660070 7_2:+54617465 Msa1063120:CDS
AAACAGTCTGCACAAGAGTG+AGG 0.661263 7_2:-54619001 None:intergenic
TCCTGAACCAGAGTATCTGG+AGG 0.687820 7_2:+54618059 Msa1063120:CDS
AACTAAAGCGCTGTGCATCG+AGG 0.688027 7_2:+54618289 Msa1063120:CDS
GGAGGACATGAAGGACGGAG+CGG 0.701011 7_2:+54618077 Msa1063120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTCAATATAAATATATTT+TGG + chr7_2:54612929-54612948 Msa1063120:intron 10.0%
!!! ACTAAGATTTTATTAAAAAA+GGG - chr7_2:54614623-54614642 None:intergenic 10.0%
!!! AACTAAGATTTTATTAAAAA+AGG - chr7_2:54614624-54614643 None:intergenic 10.0%
!!! TTTTTAATAAAATCTTAGTT+TGG + chr7_2:54614624-54614643 Msa1063120:intron 10.0%
!! AAAGAAAAACTAATAAAAAA+TGG + chr7_2:54617306-54617325 Msa1063120:intron 10.0%
!!! AAAATATTTTAGCAAAACTT+GGG - chr7_2:54612817-54612836 None:intergenic 15.0%
!! TTATGTACCAAAATATATTT+CGG - chr7_2:54612894-54612913 None:intergenic 15.0%
!!! AACAATATTTTTTCTATTTG+AGG + chr7_2:54613457-54613476 Msa1063120:intron 15.0%
!! TATCTTAATGAAATTTATGT+AGG - chr7_2:54614003-54614022 None:intergenic 15.0%
!!! TAAAACATGCAATTTTATTT+TGG + chr7_2:54615037-54615056 Msa1063120:intron 15.0%
!!! ATTCTATTAATTTTTAAGGA+AGG - chr7_2:54615106-54615125 None:intergenic 15.0%
!!! AAGGATTCTATTAATTTTTA+AGG - chr7_2:54615110-54615129 None:intergenic 15.0%
!!! AAATAAAAACTATTTTCTCA+CGG - chr7_2:54615175-54615194 None:intergenic 15.0%
!!! AGAAAATAGTTTTTATTTCA+TGG + chr7_2:54615177-54615196 Msa1063120:intron 15.0%
!!! TAATTCTATTTTAGAAAACA+TGG - chr7_2:54616031-54616050 None:intergenic 15.0%
!! TAAAATTAAGGTGAAATTTA+GGG + chr7_2:54616280-54616299 Msa1063120:intron 15.0%
!!! AAAATTTTGAATTTTGTTTC+TGG + chr7_2:54616791-54616810 Msa1063120:intron 15.0%
!! TTGTATTTATACCTTATATA+AGG + chr7_2:54617331-54617350 Msa1063120:intron 15.0%
!! TGTATTTATACCTTATATAA+GGG + chr7_2:54617332-54617351 Msa1063120:intron 15.0%
!! ATTAGTAGTGTTTATATAGT+GGG + chr7_2:54612646-54612665 Msa1063120:intron 20.0%
!!! AAATATTTTAGCAAAACTTG+GGG - chr7_2:54612816-54612835 None:intergenic 20.0%
!!! CAAAATATTTTAGCAAAACT+TGG - chr7_2:54612818-54612837 None:intergenic 20.0%
!!! CAAGTTTTGCTAAAATATTT+TGG + chr7_2:54612816-54612835 Msa1063120:intron 20.0%
!! ATCTGAATTCTCTATTTATA+AGG - chr7_2:54613123-54613142 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG - chr7_2:54613589-54613608 None:intergenic 20.0%
!! GTAATAATACCATATTAAAG+TGG + chr7_2:54613599-54613618 Msa1063120:intron 20.0%
!! CATAAATTTCATTAAGATAG+CGG + chr7_2:54614004-54614023 Msa1063120:intron 20.0%
!!! TTAATAAAATCTTAGTTTGG+CGG + chr7_2:54614627-54614646 Msa1063120:intron 20.0%
!! ACACAATATATTAGCAATTT+AGG + chr7_2:54614872-54614891 Msa1063120:intron 20.0%
!! TCACATTTGTAATGATATTA+AGG + chr7_2:54614978-54614997 Msa1063120:intron 20.0%
!! CACATTTGTAATGATATTAA+GGG + chr7_2:54614979-54614998 Msa1063120:intron 20.0%
!! TTTATTTCATGGACATTATT+TGG + chr7_2:54615188-54615207 Msa1063120:intron 20.0%
!!! AATTACATTTGTTTTGTGAA+GGG - chr7_2:54615564-54615583 None:intergenic 20.0%
!! AAGAATCAAAGAAAAGAAAA+AGG + chr7_2:54616141-54616160 Msa1063120:intron 20.0%
!! GTAAAATTAAGGTGAAATTT+AGG + chr7_2:54616279-54616298 Msa1063120:intron 20.0%
!!! TATTTTGTTGTCAAACAAAT+TGG - chr7_2:54616306-54616325 None:intergenic 20.0%
!!! AATTTGTTTGACAACAAAAT+AGG + chr7_2:54616305-54616324 Msa1063120:intron 20.0%
!! ATTTGTTTGACAACAAAATA+GGG + chr7_2:54616306-54616325 Msa1063120:intron 20.0%
!!! TAATTTTAACCTAAACTCTA+GGG - chr7_2:54616411-54616430 None:intergenic 20.0%
!!! TAGAGTTTAGGTTAAAATTA+GGG + chr7_2:54616411-54616430 Msa1063120:intron 20.0%
!! AATACATGTCATAACATAAT+CGG + chr7_2:54616502-54616521 Msa1063120:intron 20.0%
!! ATGACTAAATTAATTCAACA+TGG - chr7_2:54616673-54616692 None:intergenic 20.0%
!! AATGTTTATGAGTTGTATTA+AGG - chr7_2:54616931-54616950 None:intergenic 20.0%
!!! TTTTTCTTTTTTGTATGACA+TGG - chr7_2:54617079-54617098 None:intergenic 20.0%
!! AAAAGAAAAAAAACATGACA+TGG + chr7_2:54617089-54617108 Msa1063120:intron 20.0%
!! AAAGAAAAAAAACATGACAT+GGG + chr7_2:54617090-54617109 Msa1063120:intron 20.0%
!! ATTTACTAATGTATCTGATA+TGG - chr7_2:54617274-54617293 None:intergenic 20.0%
!!! AATTTGCTTTTAAAGAACAA+GGG - chr7_2:54617421-54617440 None:intergenic 20.0%
!!! TAATTTGCTTTTAAAGAACA+AGG - chr7_2:54617422-54617441 None:intergenic 20.0%
!!! ATCAACAATTTTAACATAAC+TGG - chr7_2:54618844-54618863 None:intergenic 20.0%
! AACTTATGAAGAACCAAAAA+GGG - chr7_2:54612461-54612480 None:intergenic 25.0%
! CATTAGTAGTGTTTATATAG+TGG + chr7_2:54612645-54612664 Msa1063120:intron 25.0%
! TTAGTAGTGTTTATATAGTG+GGG + chr7_2:54612647-54612666 Msa1063120:intron 25.0%
!!! GAACACAATCTGAAATATTT+TGG + chr7_2:54612838-54612857 Msa1063120:intron 25.0%
!!! ACAATCTGAAATATTTTGGT+AGG + chr7_2:54612842-54612861 Msa1063120:intron 25.0%
! CAAGTAATATGAGAAACTTT+GGG - chr7_2:54613065-54613084 None:intergenic 25.0%
! ACAAGTAATATGAGAAACTT+TGG - chr7_2:54613066-54613085 None:intergenic 25.0%
! ACTAATAAGTGAGAAACTTT+GGG - chr7_2:54613090-54613109 None:intergenic 25.0%
! AACTAATAAGTGAGAAACTT+TGG - chr7_2:54613091-54613110 None:intergenic 25.0%
!! TTTTTCTATTTGAGGAGAAA+TGG + chr7_2:54613465-54613484 Msa1063120:intron 25.0%
! AGTTCTTCAAACTATCAATA+TGG - chr7_2:54613521-54613540 None:intergenic 25.0%
! TGATAGTTTGAAGAACTTAA+AGG + chr7_2:54613524-54613543 Msa1063120:intron 25.0%
! ATACTGAAACCACTTTAATA+TGG - chr7_2:54613611-54613630 None:intergenic 25.0%
! CATATATTACATCACATAAC+AGG - chr7_2:54614060-54614079 None:intergenic 25.0%
!! TGTTTCGTTATCTTTGTTAT+TGG + chr7_2:54614088-54614107 Msa1063120:intron 25.0%
! GTCTTTCTTTATGAGATTTA+TGG + chr7_2:54614196-54614215 Msa1063120:intron 25.0%
! CTGAACAAAGAAGAAAATAA+AGG - chr7_2:54614554-54614573 None:intergenic 25.0%
! GGAAAAAATAATTACAAGAG+GGG - chr7_2:54614602-54614621 None:intergenic 25.0%
! GGGAAAAAATAATTACAAGA+GGG - chr7_2:54614603-54614622 None:intergenic 25.0%
! AGGGAAAAAATAATTACAAG+AGG - chr7_2:54614604-54614623 None:intergenic 25.0%
! CCTAAAAAAGCTATAACAAA+CGG + chr7_2:54614732-54614751 Msa1063120:intron 25.0%
! CTAAAAAAGCTATAACAAAC+GGG + chr7_2:54614733-54614752 Msa1063120:intron 25.0%
! TGATATTAAGGGTTAAATAC+AGG + chr7_2:54614990-54615009 Msa1063120:intron 25.0%
! GATATTAAGGGTTAAATACA+GGG + chr7_2:54614991-54615010 Msa1063120:intron 25.0%
!!! CTTTTTTTGACAACTAAGAT+TGG - chr7_2:54615226-54615245 None:intergenic 25.0%
! GCTAGATAATAGAAAAAGAA+TGG - chr7_2:54615280-54615299 None:intergenic 25.0%
!! AATTTTCAGCATAACCTAAT+TGG - chr7_2:54615379-54615398 None:intergenic 25.0%
!!! TCAAAACACGATTTTTGATT+CGG + chr7_2:54615495-54615514 Msa1063120:intron 25.0%
! TATCTGTATATGACATAGTT+TGG + chr7_2:54615531-54615550 Msa1063120:intron 25.0%
!!! CAATTACATTTGTTTTGTGA+AGG - chr7_2:54615565-54615584 None:intergenic 25.0%
! CTTCACAAAACAAATGTAAT+TGG + chr7_2:54615563-54615582 Msa1063120:intron 25.0%
!! GTGTTTTCTTATGCATATTT+AGG - chr7_2:54615630-54615649 None:intergenic 25.0%
! AGAAATAGTCGTATATAAAC+CGG - chr7_2:54615878-54615897 None:intergenic 25.0%
! TGTTAAAATGTTTACCAGTT+AGG + chr7_2:54615968-54615987 Msa1063120:intron 25.0%
! TATGTCATGAATTAGTTAGA+TGG + chr7_2:54616079-54616098 Msa1063120:intron 25.0%
! TATGTGAAGTTAAGAGAAAA+AGG + chr7_2:54616185-54616204 Msa1063120:intron 25.0%
! ATGTGAAGTTAAGAGAAAAA+GGG + chr7_2:54616186-54616205 Msa1063120:intron 25.0%
!! ACAGTTTTTGCGTAAAATTA+AGG + chr7_2:54616268-54616287 Msa1063120:intron 25.0%
!! TATAGTTGTTTCGGAAAAAT+AGG + chr7_2:54616330-54616349 Msa1063120:intron 25.0%
!! ATAGTTGTTTCGGAAAAATA+GGG + chr7_2:54616331-54616350 Msa1063120:intron 25.0%
! AAATTTAATCCCTAGAGTTT+AGG + chr7_2:54616399-54616418 Msa1063120:intron 25.0%
!!! CTAATTTTAACCTAAACTCT+AGG - chr7_2:54616412-54616431 None:intergenic 25.0%
!! CTAGAGTTTAGGTTAAAATT+AGG + chr7_2:54616410-54616429 Msa1063120:intron 25.0%
! TATGTTATGACATGTATTGA+TGG - chr7_2:54616500-54616519 None:intergenic 25.0%
!! TAACATGAAGTACTATTCAT+TGG - chr7_2:54616589-54616608 None:intergenic 25.0%
! GATCTAGTGAAAAAATTAAC+AGG - chr7_2:54616618-54616637 None:intergenic 25.0%
! TTATGTGATTACATGTAAGA+AGG + chr7_2:54617033-54617052 Msa1063120:intron 25.0%
! CTATATATGCATCTGTTTAA+AGG - chr7_2:54617193-54617212 None:intergenic 25.0%
!!! ATTTGCTTTTAAAGAACAAG+GGG - chr7_2:54617420-54617439 None:intergenic 25.0%
! ATTTAACCATTCATTCATGT+TGG - chr7_2:54617497-54617516 None:intergenic 25.0%
! TAAACTAGAAAAGAAAGAAC+TGG + chr7_2:54617825-54617844 Msa1063120:CDS 25.0%
! ACTGGCAAAAATAATGTTAA+TGG + chr7_2:54617843-54617862 Msa1063120:CDS 25.0%
! GCAAAAATAATGTTAATGGA+TGG + chr7_2:54617847-54617866 Msa1063120:CDS 25.0%
!! AAAGTATTTGTGACAATTTG+TGG - chr7_2:54618026-54618045 None:intergenic 25.0%
! AATCTTATTCTGTCTATCAT+AGG + chr7_2:54618111-54618130 Msa1063120:CDS 25.0%
!! TTTTACTTCAACTTCGAAAA+GGG + chr7_2:54618480-54618499 Msa1063120:CDS 25.0%
!! AATATTTTCCCATCTTTTCA+AGG + chr7_2:54618911-54618930 Msa1063120:CDS 25.0%
!! ATATTTTCCCATCTTTTCAA+GGG + chr7_2:54618912-54618931 Msa1063120:CDS 25.0%
TCAATCAAACAACATTTCAG+TGG + chr7_2:54612028-54612047 Msa1063120:CDS 30.0%
TTCCAGAAGGACTTAAAAAA+TGG + chr7_2:54612051-54612070 Msa1063120:CDS 30.0%
!!! TTCCATTTTTTAAGTCCTTC+TGG - chr7_2:54612056-54612075 None:intergenic 30.0%
CTCTTTATCTAATTCCCAAA+CGG - chr7_2:54612228-54612247 None:intergenic 30.0%
ACTCGCTAAAATTATGTTAG+TGG + chr7_2:54612292-54612311 Msa1063120:CDS 30.0%
GCTAAAATTATGTTAGTGGA+TGG + chr7_2:54612296-54612315 Msa1063120:CDS 30.0%
ACTTATGAAGAACCAAAAAG+GGG - chr7_2:54612460-54612479 None:intergenic 30.0%
CAACTTATGAAGAACCAAAA+AGG - chr7_2:54612462-54612481 None:intergenic 30.0%
CACATATGGAAAATGTGTTT+GGG - chr7_2:54612486-54612505 None:intergenic 30.0%
ACACATATGGAAAATGTGTT+TGG - chr7_2:54612487-54612506 None:intergenic 30.0%
! TCATCTAGTTCAAACACATA+TGG - chr7_2:54612500-54612519 None:intergenic 30.0%
TAAACACAAATTCCCATGTT+GGG + chr7_2:54612563-54612582 Msa1063120:intron 30.0%
GTTGTGTGTATTGAAAAAAG+TGG + chr7_2:54612596-54612615 Msa1063120:intron 30.0%
TAATTATGTACCCCTATTAG+AGG - chr7_2:54612678-54612697 None:intergenic 30.0%
! GCTTGATCCGAAATATATTT+TGG + chr7_2:54612884-54612903 Msa1063120:intron 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG + chr7_2:54613160-54613179 Msa1063120:intron 30.0%
! TTAAGACCATAGTCCATTTT+CGG + chr7_2:54613274-54613293 Msa1063120:intron 30.0%
!! ATTAAACCGAAAATGGACTA+TGG - chr7_2:54613283-54613302 None:intergenic 30.0%
TCTTAAAAACATAGTCCCTT+CGG + chr7_2:54613325-54613344 Msa1063120:intron 30.0%
! AAAGTACTCTTTATTCCGAA+GGG - chr7_2:54613361-54613380 None:intergenic 30.0%
!! AAAAGTACTCTTTATTCCGA+AGG - chr7_2:54613362-54613381 None:intergenic 30.0%
TTAAGATCATAGTCCCTATT+TGG + chr7_2:54613380-54613399 Msa1063120:intron 30.0%
! GGACATTGTTATTCCAAATA+GGG - chr7_2:54613396-54613415 None:intergenic 30.0%
! TGGACATTGTTATTCCAAAT+AGG - chr7_2:54613397-54613416 None:intergenic 30.0%
GAAGAACTTAAAGGTTAGAA+AGG + chr7_2:54613533-54613552 Msa1063120:intron 30.0%
TGGTTTCAGTATTAAAAGAG+TGG + chr7_2:54613619-54613638 Msa1063120:intron 30.0%
TTCAAGAGGTGAAATTGAAA+GGG + chr7_2:54613672-54613691 Msa1063120:intron 30.0%
AACAATTAGATTACACCACT+TGG - chr7_2:54613771-54613790 None:intergenic 30.0%
AGTGGTGTAATCTAATTGTT+TGG + chr7_2:54613771-54613790 Msa1063120:intron 30.0%
GTGGTGTAATCTAATTGTTT+GGG + chr7_2:54613772-54613791 Msa1063120:intron 30.0%
AGTTGTGATGATAAAATGCT+AGG - chr7_2:54613864-54613883 None:intergenic 30.0%
GTATGGAAGAAAATCAAAAC+GGG - chr7_2:54613912-54613931 None:intergenic 30.0%
CGTATGGAAGAAAATCAAAA+CGG - chr7_2:54613913-54613932 None:intergenic 30.0%
ACATGTTTAGGAATGACAAT+GGG - chr7_2:54613976-54613995 None:intergenic 30.0%
!! TTCGTTATCTTTGTTATTGG+TGG + chr7_2:54614091-54614110 Msa1063120:intron 30.0%
!! TGGGATTTTTCAGAATCATT+TGG + chr7_2:54614129-54614148 Msa1063120:intron 30.0%
!! GGGATTTTTCAGAATCATTT+GGG + chr7_2:54614130-54614149 Msa1063120:intron 30.0%
!! TTATGGTTTCATTTTTGCCA+TGG + chr7_2:54614213-54614232 Msa1063120:intron 30.0%
ATCTGTTTCGAAGAACAATT+GGG - chr7_2:54614327-54614346 None:intergenic 30.0%
TCTTTACATATTTACCGTGA+AGG + chr7_2:54614383-54614402 Msa1063120:intron 30.0%
!!! CCGTTTGTTATAGCTTTTTT+AGG - chr7_2:54614735-54614754 None:intergenic 30.0%
TTCATGTAGAAATAAGCAAG+AGG - chr7_2:54614812-54614831 None:intergenic 30.0%
TAGTGTCTTTCATGTGATAT+TGG - chr7_2:54614901-54614920 None:intergenic 30.0%
AATGTGATGTTATGTGATGT+TGG - chr7_2:54614965-54614984 None:intergenic 30.0%
! GGACCATTGCAAATTTTATA+GGG + chr7_2:54615012-54615031 Msa1063120:intron 30.0%
AGTCCCTATAAAATTTGCAA+TGG - chr7_2:54615018-54615037 None:intergenic 30.0%
TTACTTCAAGAAAAGGGTTA+AGG - chr7_2:54615129-54615148 None:intergenic 30.0%
CTAGAGTTACTTCAAGAAAA+GGG - chr7_2:54615135-54615154 None:intergenic 30.0%
! TCTAGAGTTACTTCAAGAAA+AGG - chr7_2:54615136-54615155 None:intergenic 30.0%
CAAAAAATGATGCACCAATT+AGG + chr7_2:54615362-54615381 Msa1063120:intron 30.0%
TCATATATCAGACTCAAAAG+TGG + chr7_2:54615665-54615684 Msa1063120:intron 30.0%
CATATATCAGACTCAAAAGT+GGG + chr7_2:54615666-54615685 Msa1063120:intron 30.0%
! TGTTGAAATTGACTTAGTCA+TGG - chr7_2:54615720-54615739 None:intergenic 30.0%
!! TTTGATTTTGTCATCTACGT+TGG - chr7_2:54615770-54615789 None:intergenic 30.0%
! AAGAGTTTCTATATTTCTGC+CGG + chr7_2:54616005-54616024 Msa1063120:intron 30.0%
!! TCTATTTTAGAAAACATGGC+CGG - chr7_2:54616027-54616046 None:intergenic 30.0%
CTTAACTTCACATAATCATC+TGG - chr7_2:54616179-54616198 None:intergenic 30.0%
AAATAGGGCTATAGTTGTTT+CGG + chr7_2:54616321-54616340 Msa1063120:intron 30.0%
AAATAGGGCTATAGTTGATT+CGG + chr7_2:54616346-54616365 Msa1063120:intron 30.0%
!! TTGATTCGGAATTAAGCTTT+AGG + chr7_2:54616360-54616379 Msa1063120:intron 30.0%
AGAAGGATAATTTCAACCAA+AGG + chr7_2:54617050-54617069 Msa1063120:intron 30.0%
TTATACCTTATATAAGGGTC+TGG + chr7_2:54617337-54617356 Msa1063120:intron 30.0%
TAAAAGCAAATTACAGACCA+TGG + chr7_2:54617429-54617448 Msa1063120:intron 30.0%
! ATAGCTCAGTACTTGATAAT+TGG - chr7_2:54617455-54617474 None:intergenic 30.0%
ATGAAACCAACATGAATGAA+TGG + chr7_2:54617488-54617507 Msa1063120:CDS 30.0%
TTGTTCATCTGATTTCCATA+TGG - chr7_2:54617779-54617798 None:intergenic 30.0%
! AATTTGTGGAGTACTAGAAT+TGG - chr7_2:54618012-54618031 None:intergenic 30.0%
TGGACAATATCAAGAATATG+AGG - chr7_2:54618180-54618199 None:intergenic 30.0%
! CTTTTCTGTTAACGAAAAAG+TGG - chr7_2:54618200-54618219 None:intergenic 30.0%
!!! CACTTTTTCGTTAACAGAAA+AGG + chr7_2:54618198-54618217 Msa1063120:CDS 30.0%
AATTATGTAGTGCCCATTAT+TGG + chr7_2:54618246-54618265 Msa1063120:CDS 30.0%
! ATTCTTGCTTTAGTTTCCTT+CGG + chr7_2:54618364-54618383 Msa1063120:CDS 30.0%
! CTTTTACTTCAACTTCGAAA+AGG + chr7_2:54618479-54618498 Msa1063120:CDS 30.0%
TTTACTTCAACTTCGAAAAG+GGG + chr7_2:54618481-54618500 Msa1063120:CDS 30.0%
TAAGGACAAGAATATCATTG+TGG + chr7_2:54618737-54618756 Msa1063120:CDS 30.0%
!!! TTTTTTCATTCCATGTCGTT+TGG + chr7_2:54618795-54618814 Msa1063120:CDS 30.0%
!! CTCACTTTTCGTTGTTAGAT+TGG - chr7_2:54611958-54611977 None:intergenic 35.0%
ATCTAACAACGAAAAGTGAG+TGG + chr7_2:54611958-54611977 Msa1063120:CDS 35.0%
AGGACTTAAAAAATGGAACG+AGG + chr7_2:54612058-54612077 Msa1063120:CDS 35.0%
CGTTTGGGAATTAGATAAAG+AGG + chr7_2:54612226-54612245 Msa1063120:CDS 35.0%
TTGGAGCTTCTCATATCAAA+GGG + chr7_2:54612329-54612348 Msa1063120:CDS 35.0%
TCTCTCTGATCTAATGTTGT+TGG + chr7_2:54612424-54612443 Msa1063120:CDS 35.0%
ATTTCAACACATGTTCCAAC+AGG - chr7_2:54612530-54612549 None:intergenic 35.0%
CTAAACACAAATTCCCATGT+TGG + chr7_2:54612562-54612581 Msa1063120:intron 35.0%
GACAACTCAATGAAACTCTT+TGG - chr7_2:54613161-54613180 None:intergenic 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG + chr7_2:54613161-54613180 Msa1063120:intron 35.0%
!! ATCTCATTTTTCTGTCCCTT+CGG + chr7_2:54613237-54613256 Msa1063120:intron 35.0%
AGAACACTCTTAATTCCGAA+GGG - chr7_2:54613255-54613274 None:intergenic 35.0%
AAGAACACTCTTAATTCCGA+AGG - chr7_2:54613256-54613275 None:intergenic 35.0%
AAGGGACATTAAACCGAAAA+TGG - chr7_2:54613290-54613309 None:intergenic 35.0%
! TTTTCGGTTTAATGTCCCTT+CGG + chr7_2:54613290-54613309 Msa1063120:intron 35.0%
AGACCATTCTTAATTCCGAA+GGG - chr7_2:54613308-54613327 None:intergenic 35.0%
AAGACCATTCTTAATTCCGA+AGG - chr7_2:54613309-54613328 None:intergenic 35.0%
TTGGAATAACAATGTCCAGT+CGG + chr7_2:54613399-54613418 Msa1063120:intron 35.0%
TTCTATTTGAGGAGAAATGG+TGG + chr7_2:54613468-54613487 Msa1063120:intron 35.0%
GAACTTAAAGGTTAGAAAGG+TGG + chr7_2:54613536-54613555 Msa1063120:intron 35.0%
GTCTTAGCACCATAATAGAA+TGG + chr7_2:54613577-54613596 Msa1063120:intron 35.0%
! AGGTTTGGAATTACACCTTA+TGG - chr7_2:54613653-54613672 None:intergenic 35.0%
TGTAATTCCAAACCTTCAAG+AGG + chr7_2:54613658-54613677 Msa1063120:intron 35.0%
AATTTCACCTCTTGAAGGTT+TGG - chr7_2:54613668-54613687 None:intergenic 35.0%
CTTTCAATTTCACCTCTTGA+AGG - chr7_2:54613673-54613692 None:intergenic 35.0%
CTTCAAGAGGTGAAATTGAA+AGG + chr7_2:54613671-54613690 Msa1063120:intron 35.0%
CAAAAACAACAAAAGCCAAG+TGG + chr7_2:54613753-54613772 Msa1063120:intron 35.0%
! ACAATGGGTTTCATATGAAG+TGG - chr7_2:54613961-54613980 None:intergenic 35.0%
CACATGTTTAGGAATGACAA+TGG - chr7_2:54613977-54613996 None:intergenic 35.0%
TATGTAGGTCTCACATGTTT+AGG - chr7_2:54613988-54614007 None:intergenic 35.0%
AATCATTTGGGAACCTTTCT+TGG + chr7_2:54614142-54614161 Msa1063120:intron 35.0%
CATTAGAGAACTAGTTGAGT+CGG - chr7_2:54614281-54614300 None:intergenic 35.0%
AAGAACAATTGGGACTAAAG+AGG - chr7_2:54614317-54614336 None:intergenic 35.0%
CATCTGTTTCGAAGAACAAT+TGG - chr7_2:54614328-54614347 None:intergenic 35.0%
TGCGATTAATCTTGATGTTC+AGG + chr7_2:54614354-54614373 Msa1063120:intron 35.0%
ACGAAAGAAGTCAAAGTGAA+GGG - chr7_2:54614486-54614505 None:intergenic 35.0%
AACGAAAGAAGTCAAAGTGA+AGG - chr7_2:54614487-54614506 None:intergenic 35.0%
GACTTCTTTCGTTAAAGATG+TGG + chr7_2:54614494-54614513 Msa1063120:intron 35.0%
GACTAGGGAAATTTGTAGTT+AGG - chr7_2:54614524-54614543 None:intergenic 35.0%
AATAAAGGAATCGCAGACTA+GGG - chr7_2:54614539-54614558 None:intergenic 35.0%
AAATAAAGGAATCGCAGACT+AGG - chr7_2:54614540-54614559 None:intergenic 35.0%
! TTCTTTGTTCAGCTTTTCGA+GGG + chr7_2:54614562-54614581 Msa1063120:intron 35.0%
TAATTACAAGAGGGGAAACT+AGG - chr7_2:54614594-54614613 None:intergenic 35.0%
GAAATAAGCAAGAGGATACT+AGG - chr7_2:54614804-54614823 None:intergenic 35.0%
! GGGACCATTGCAAATTTTAT+AGG + chr7_2:54615011-54615030 Msa1063120:intron 35.0%
AAAGAGTCAACTGAAACTAG+CGG - chr7_2:54615302-54615321 None:intergenic 35.0%
!! AGGTAAGCTATCTGGAATTT+TGG - chr7_2:54615417-54615436 None:intergenic 35.0%
ACTTTGCCACTGTAAGATAT+GGG - chr7_2:54615442-54615461 None:intergenic 35.0%
TACTTTGCCACTGTAAGATA+TGG - chr7_2:54615443-54615462 None:intergenic 35.0%
CTTACAGTGGCAAAGTAAAT+TGG + chr7_2:54615446-54615465 Msa1063120:intron 35.0%
! GAGTATCCTAATTCTGAAGA+TGG - chr7_2:54615477-54615496 None:intergenic 35.0%
!! GCATATATTGGCGTTGTTTT+TGG - chr7_2:54615746-54615765 None:intergenic 35.0%
ATCTACGTTGGTGCATATAT+TGG - chr7_2:54615758-54615777 None:intergenic 35.0%
TTTACCAGTTAGGAAGTGAT+AGG + chr7_2:54615978-54615997 Msa1063120:intron 35.0%
GTCATGAATTAGTTAGATGG+AGG + chr7_2:54616082-54616101 Msa1063120:intron 35.0%
AGTTCGTGAAACAAGAGAAA+AGG + chr7_2:54616224-54616243 Msa1063120:intron 35.0%
!! TCGGAATTAAGCTTTAGGTT+AGG + chr7_2:54616365-54616384 Msa1063120:intron 35.0%
!! CGGAATTAAGCTTTAGGTTA+GGG + chr7_2:54616366-54616385 Msa1063120:intron 35.0%
! CTTTAGGTTAGGGTTAAAAC+AGG + chr7_2:54616376-54616395 Msa1063120:intron 35.0%
! TTAGGGCTAACATTAGCTTA+CGG + chr7_2:54616428-54616447 Msa1063120:intron 35.0%
ATAGATAAAGCAGCATGTGA+TGG + chr7_2:54616473-54616492 Msa1063120:intron 35.0%
CATAAACATTCGACCATCAA+TGG + chr7_2:54616941-54616960 Msa1063120:intron 35.0%
ATGAGTTGTGATTCCATTGA+TGG - chr7_2:54616957-54616976 None:intergenic 35.0%
TTGTATGACATGGATTCCTT+TGG - chr7_2:54617069-54617088 None:intergenic 35.0%
GATGAGTTTATAAGCTCTTC+TGG - chr7_2:54617586-54617605 None:intergenic 35.0%
CAAAGAAGATTACTTGCCAA+AGG + chr7_2:54617609-54617628 Msa1063120:CDS 35.0%
CAAGGAAGACTTAAATCTCA+TGG + chr7_2:54617663-54617682 Msa1063120:CDS 35.0%
!! AAGTATTTTGGGGAATCCTT+CGG - chr7_2:54617739-54617758 None:intergenic 35.0%
AGGATTCCCCAAAATACTTT+CGG + chr7_2:54617740-54617759 Msa1063120:CDS 35.0%
!!! ACATTCCCGAAAGTATTTTG+GGG - chr7_2:54617749-54617768 None:intergenic 35.0%
!!! CACATTCCCGAAAGTATTTT+GGG - chr7_2:54617750-54617769 None:intergenic 35.0%
! AATGGATGGATGTTTTCTGT+TGG + chr7_2:54617861-54617880 Msa1063120:CDS 35.0%
TTGGAGCTTGTGATTACAAA+AGG + chr7_2:54617880-54617899 Msa1063120:CDS 35.0%
TGGAGCTTGTGATTACAAAA+GGG + chr7_2:54617881-54617900 Msa1063120:CDS 35.0%
TCAATTCTAAACTTCCAAGC+CGG + chr7_2:54617905-54617924 Msa1063120:CDS 35.0%
TCTGTCTGATCTTATGTTGT+TGG + chr7_2:54617975-54617994 Msa1063120:CDS 35.0%
! TAGCTTGGATTTTGAACTTC+AGG - chr7_2:54618147-54618166 None:intergenic 35.0%
AAAGGTGAGACAAAAAGTGA+TGG + chr7_2:54618216-54618235 Msa1063120:CDS 35.0%
AAGGTGAGACAAAAAGTGAT+GGG + chr7_2:54618217-54618236 Msa1063120:CDS 35.0%
!! GTTTTGGTGGTATATGCATA+AGG + chr7_2:54618391-54618410 Msa1063120:CDS 35.0%
TGTCACAACTAATACTCAAG+TGG + chr7_2:54618428-54618447 Msa1063120:CDS 35.0%
! AGGGGAAATTTGAAATTGCA+CGG + chr7_2:54618499-54618518 Msa1063120:CDS 35.0%
!! TGCTTTGATTTTCGATGGAT+TGG + chr7_2:54618686-54618705 Msa1063120:CDS 35.0%
TCATTTGAAGATGAGTAACC+AGG + chr7_2:54618761-54618780 Msa1063120:CDS 35.0%
AACATTTCAGTGGTTCCAGA+AGG + chr7_2:54612038-54612057 Msa1063120:CDS 40.0%
! GAGAGAAGACCTTTTGCTTA+TGG + chr7_2:54612130-54612149 Msa1063120:CDS 40.0%
! AGACCTTTTGCTTATGGAAG+AGG + chr7_2:54612136-54612155 Msa1063120:CDS 40.0%
TGACCTCTTCCATAAGCAAA+AGG - chr7_2:54612142-54612161 None:intergenic 40.0%
TAACCGAGCAGATAAAAGCT+TGG + chr7_2:54612187-54612206 Msa1063120:CDS 40.0%
! GTTCATGTCGTTCGAGTTTA+AGG - chr7_2:54612274-54612293 None:intergenic 40.0%
! AGTGGATGGATGTTTTCTGT+TGG + chr7_2:54612310-54612329 Msa1063120:CDS 40.0%
GTTGGAGCTTCTCATATCAA+AGG + chr7_2:54612328-54612347 Msa1063120:CDS 40.0%
!! ACACTAGTTCTACCCAACAT+GGG - chr7_2:54612578-54612597 None:intergenic 40.0%
!! AACACTAGTTCTACCCAACA+TGG - chr7_2:54612579-54612598 None:intergenic 40.0%
AAAAAGTGGAAGTCCCACAT+CGG + chr7_2:54612610-54612629 Msa1063120:intron 40.0%
AATAGCTCGTTAACACAAGC+TGG - chr7_2:54613208-54613227 None:intergenic 40.0%
AGGGACAGAAAAATGAGATG+AGG - chr7_2:54613236-54613255 None:intergenic 40.0%
TGTCCCTTCGGAATTAAGAA+TGG + chr7_2:54613302-54613321 Msa1063120:intron 40.0%
AAGGGACGTATATTACCGAA+GGG - chr7_2:54613343-54613362 None:intergenic 40.0%
TTCGGTAATATACGTCCCTT+CGG + chr7_2:54613343-54613362 Msa1063120:intron 40.0%
AGATCATTCTTGATTCCGAC+TGG - chr7_2:54613417-54613436 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG + chr7_2:54613487-54613506 Msa1063120:intron 40.0%
GTACTACGACCACTCAAATA+TGG - chr7_2:54613499-54613518 None:intergenic 40.0%
GTGGAAACACCATATTTGAG+TGG + chr7_2:54613555-54613574 Msa1063120:intron 40.0%
GTGCTAAGACCACTCAAATA+TGG - chr7_2:54613567-54613586 None:intergenic 40.0%
! AGAGTGGTCTTAGTACCATA+AGG + chr7_2:54613635-54613654 Msa1063120:intron 40.0%
AGAGGTGAAATTGAAAGGGT+TGG + chr7_2:54613676-54613695 Msa1063120:intron 40.0%
ATGGGTTTCATATGAAGTGG+TGG - chr7_2:54613958-54613977 None:intergenic 40.0%
AGAAGAGTTTCCCATATTGC+AGG - chr7_2:54614176-54614195 None:intergenic 40.0%
GGAATGGTTGGAGAAATGTT+TGG + chr7_2:54614248-54614267 Msa1063120:intron 40.0%
TAACTGCCAAGCTGATATGT+TGG + chr7_2:54614406-54614425 Msa1063120:intron 40.0%
TATTGGCCAACATATCAGCT+TGG - chr7_2:54614415-54614434 None:intergenic 40.0%
AGCTGATATGTTGGCCAATA+TGG + chr7_2:54614415-54614434 Msa1063120:intron 40.0%
GCTGATATGTTGGCCAATAT+GGG + chr7_2:54614416-54614435 Msa1063120:intron 40.0%
AAGAAGTCAAAGTGAAGGGT+CGG - chr7_2:54614482-54614501 None:intergenic 40.0%
! CTTCTTTGTTCAGCTTTTCG+AGG + chr7_2:54614561-54614580 Msa1063120:intron 40.0%
! AAATCTTAGTTTGGCGGCAT+AGG + chr7_2:54614633-54614652 Msa1063120:intron 40.0%
GAAACAACGAAATCCCAACT+AGG - chr7_2:54614682-54614701 None:intergenic 40.0%
TATGGGAAAGGTAAGCTATC+TGG - chr7_2:54615425-54615444 None:intergenic 40.0%
ACCTTTCCCATATCTTACAG+TGG + chr7_2:54615433-54615452 Msa1063120:intron 40.0%
GTGCATCCATCTTCAGAATT+AGG + chr7_2:54615468-54615487 Msa1063120:intron 40.0%
AATCAGAGACTAATCAGCCT+AGG + chr7_2:54615796-54615815 Msa1063120:intron 40.0%
! ACTAATTTTGCAGCACTCCT+AGG - chr7_2:54615816-54615835 None:intergenic 40.0%
AGTCGTATATAAACCGGTTG+TGG - chr7_2:54615872-54615891 None:intergenic 40.0%
TTGTCCTATCACTTCCTAAC+TGG - chr7_2:54615985-54616004 None:intergenic 40.0%
! TAGGGCTAACATTAGCTTAC+GGG + chr7_2:54616429-54616448 Msa1063120:intron 40.0%
CCACTTGCATCTTTCTCTTT+GGG - chr7_2:54616532-54616551 None:intergenic 40.0%
ACCACTTGCATCTTTCTCTT+TGG - chr7_2:54616533-54616552 None:intergenic 40.0%
TGGTCTTCAATTTACGCAAG+TGG + chr7_2:54616549-54616568 Msa1063120:intron 40.0%
CTATTAACGACGAGACTTGA+CGG - chr7_2:54616697-54616716 None:intergenic 40.0%
AGTCTCGTCGTTAATAGTGT+TGG + chr7_2:54616700-54616719 Msa1063120:intron 40.0%
CCAAACCAGACCCTTATATA+AGG - chr7_2:54617345-54617364 None:intergenic 40.0%
CCTTATATAAGGGTCTGGTT+TGG + chr7_2:54617342-54617361 Msa1063120:intron 40.0%
!! TATAAGGGTCTGGTTTGGTT+TGG + chr7_2:54617347-54617366 Msa1063120:intron 40.0%
! CAGTACTTGATAATTGGCCA+TGG - chr7_2:54617449-54617468 None:intergenic 40.0%
!! TATAAGCTCTTCTGGAACGA+TGG - chr7_2:54617578-54617597 None:intergenic 40.0%
AGAAGATTACTTGCCAAAGG+TGG + chr7_2:54617612-54617631 Msa1063120:CDS 40.0%
TTGCCAAAGGTGGTTTCAAT+TGG + chr7_2:54617622-54617641 Msa1063120:CDS 40.0%
TTCAATTGGACCCAGATTCA+AGG + chr7_2:54617636-54617655 Msa1063120:CDS 40.0%
TCAATTGGACCCAGATTCAA+GGG + chr7_2:54617637-54617656 Msa1063120:CDS 40.0%
GGATTCCCCAAAATACTTTC+GGG + chr7_2:54617741-54617760 Msa1063120:CDS 40.0%
!!! CCACATTCCCGAAAGTATTT+TGG - chr7_2:54617751-54617770 None:intergenic 40.0%
CCAAAATACTTTCGGGAATG+TGG + chr7_2:54617748-54617767 Msa1063120:CDS 40.0%
AGGTGAGACAAAAAGTGATG+GGG + chr7_2:54618218-54618237 Msa1063120:CDS 40.0%
GGATGCTGAGTACCAATAAT+GGG - chr7_2:54618261-54618280 None:intergenic 40.0%
! AGTTTCCTTCGGAACTGTTT+TGG + chr7_2:54618375-54618394 Msa1063120:CDS 40.0%
TAATACTCAAGTGGATGCGT+CGG + chr7_2:54618437-54618456 Msa1063120:CDS 40.0%
! CCACTTTGCTTTCGTTGTTT+TGG - chr7_2:54618535-54618554 None:intergenic 40.0%
CCAAAACAACGAAAGCAAAG+TGG + chr7_2:54618532-54618551 Msa1063120:CDS 40.0%
!! GGGAGCATCATAAAAACAAC+TGG + chr7_2:54618571-54618590 Msa1063120:CDS 40.0%
! AATATTTCTGCTGCTGAGTC+CGG + chr7_2:54618606-54618625 Msa1063120:CDS 40.0%
! CTGGTTATTGTTATTGCTCC+CGG - chr7_2:54618628-54618647 None:intergenic 40.0%
TCTCAGCCGGAAATTTACTT+CGG + chr7_2:54618662-54618681 Msa1063120:CDS 40.0%
AAGCAGCCGAAGTAAATTTC+CGG - chr7_2:54618671-54618690 None:intergenic 40.0%
GAAAAAACTCTTCCAACTCC+TGG - chr7_2:54618782-54618801 None:intergenic 40.0%
AAGATCAACTCCAAACGACA+TGG - chr7_2:54618808-54618827 None:intergenic 40.0%
! ATGTCGTTTGGAGTTGATCT+TGG + chr7_2:54618807-54618826 Msa1063120:CDS 40.0%
! TGTCGTTTGGAGTTGATCTT+GGG + chr7_2:54618808-54618827 Msa1063120:CDS 40.0%
TAGACGACCCTTGAAAAGAT+GGG - chr7_2:54618922-54618941 None:intergenic 40.0%
!! TTTTCAAGGGTCGTCTAGAA+TGG + chr7_2:54618925-54618944 Msa1063120:CDS 40.0%
ACGAGGATGCTTACATTCCA+AGG + chr7_2:54612075-54612094 Msa1063120:CDS 45.0%
GGATGCTTACATTCCAAGGA+AGG + chr7_2:54612079-54612098 Msa1063120:CDS 45.0%
!! ATTCCAAGGAAGGTGTCGAT+CGG + chr7_2:54612089-54612108 Msa1063120:CDS 45.0%
! GCTCCAAGCTTTTATCTGCT+CGG - chr7_2:54612193-54612212 None:intergenic 45.0%
GAGGTTCGTGAATGCTATCT+AGG + chr7_2:54612245-54612264 Msa1063120:CDS 45.0%
TCTTTCAGCACTTCAGTTGC+GGG - chr7_2:54612395-54612414 None:intergenic 45.0%
GTCTTTCAGCACTTCAGTTG+CGG - chr7_2:54612396-54612415 None:intergenic 45.0%
GAAGAACCAAAAAGGGGATC+TGG - chr7_2:54612454-54612473 None:intergenic 45.0%
CTAGATGACTCTCTTCCTGT+TGG + chr7_2:54612512-54612531 Msa1063120:intron 45.0%
AGTGGGGATGTACCTCTAAT+AGG + chr7_2:54612663-54612682 Msa1063120:intron 45.0%
GTGGGGATGTACCTCTAATA+GGG + chr7_2:54612664-54612683 Msa1063120:intron 45.0%
TGGGGATGTACCTCTAATAG+GGG + chr7_2:54612665-54612684 Msa1063120:intron 45.0%
GAAGGGACGTATATTACCGA+AGG - chr7_2:54613344-54613363 None:intergenic 45.0%
TGCACAATAGCGAGAACAGA+CGG - chr7_2:54613826-54613845 None:intergenic 45.0%
! AAGTGGTGGAACTTTCCAGA+TGG - chr7_2:54613944-54613963 None:intergenic 45.0%
GTTTCCCATATTGCAGGTGA+AGG - chr7_2:54614170-54614189 None:intergenic 45.0%
! CATTTTTGCCATGGAGTCTG+CGG + chr7_2:54614222-54614241 Msa1063120:intron 45.0%
CTGAACGCTATGACCCATAT+TGG - chr7_2:54614432-54614451 None:intergenic 45.0%
CAATATGGGTCATAGCGTTC+AGG + chr7_2:54614430-54614449 Msa1063120:intron 45.0%
!! GTTCAGCTTTTCGAGGGTTT+TGG + chr7_2:54614568-54614587 Msa1063120:intron 45.0%
GGCATAGGATGGAAGTTTCA+CGG + chr7_2:54614648-54614667 Msa1063120:intron 45.0%
GCATAGGATGGAAGTTTCAC+GGG + chr7_2:54614649-54614668 Msa1063120:intron 45.0%
CATAGGATGGAAGTTTCACG+GGG + chr7_2:54614650-54614669 Msa1063120:intron 45.0%
CAACGAAATCCCAACTAGGT+TGG - chr7_2:54614678-54614697 None:intergenic 45.0%
TAGCATAGACAGACGTCAAG+AGG - chr7_2:54614704-54614723 None:intergenic 45.0%
GCCACTGTAAGATATGGGAA+AGG - chr7_2:54615437-54615456 None:intergenic 45.0%
ATGCAAGTATTCCTCGAACC+TGG + chr7_2:54615841-54615860 Msa1063120:intron 45.0%
CCCAAAGAGAAAGATGCAAG+TGG + chr7_2:54616529-54616548 Msa1063120:intron 45.0%
TACACACGTGGAAGCTGATT+TGG - chr7_2:54616755-54616774 None:intergenic 45.0%
AAATCAGCTTCCACGTGTGT+AGG + chr7_2:54616754-54616773 Msa1063120:intron 45.0%
AATCAGCTTCCACGTGTGTA+GGG + chr7_2:54616755-54616774 Msa1063120:intron 45.0%
CAAATTTGTCCCTACACACG+TGG - chr7_2:54616767-54616786 None:intergenic 45.0%
TAACTAGCTCGTCAGACAAG+AGG - chr7_2:54617388-54617407 None:intergenic 45.0%
TACTGAGCTATGACGAAGCA+AGG + chr7_2:54617464-54617483 Msa1063120:CDS 45.0%
ACTGAGCTATGACGAAGCAA+GGG + chr7_2:54617465-54617484 Msa1063120:CDS 45.0%
AGACATGTTGCTGACATCTG+TGG + chr7_2:54617522-54617541 Msa1063120:CDS 45.0%
GGTCCAATTGAAACCACCTT+TGG - chr7_2:54617628-54617647 None:intergenic 45.0%
TCCTTGCTTCCCTTGAATCT+GGG - chr7_2:54617649-54617668 None:intergenic 45.0%
TTCCTTGCTTCCCTTGAATC+TGG - chr7_2:54617650-54617669 None:intergenic 45.0%
ATGTACCTGTTACATCGAGC+AGG + chr7_2:54617709-54617728 Msa1063120:CDS 45.0%
CCTTTCAGCACTTTAGATGC+GGG - chr7_2:54617946-54617965 None:intergenic 45.0%
GCCTTTCAGCACTTTAGATG+CGG - chr7_2:54617947-54617966 None:intergenic 45.0%
CTGGTTCAGGAAACTCATCA+GGG - chr7_2:54618050-54618069 None:intergenic 45.0%
! TCTGGTTCAGGAAACTCATC+AGG - chr7_2:54618051-54618070 None:intergenic 45.0%
! GTTTCCTGAACCAGAGTATC+TGG + chr7_2:54618056-54618075 Msa1063120:CDS 45.0%
TTCATGTCCTCCAGATACTC+TGG - chr7_2:54618069-54618088 None:intergenic 45.0%
! AGAGTATCTGGAGGACATGA+AGG + chr7_2:54618068-54618087 Msa1063120:CDS 45.0%
TATCTGGAGGACATGAAGGA+CGG + chr7_2:54618072-54618091 Msa1063120:CDS 45.0%
!! TGAGGAGCTTTGAAGTAGCT+TGG - chr7_2:54618162-54618181 None:intergenic 45.0%
CGGATGCTGAGTACCAATAA+TGG - chr7_2:54618262-54618281 None:intergenic 45.0%
! GATGCACAGCGCTTTAGTTT+GGG - chr7_2:54618288-54618307 None:intergenic 45.0%
CTTGCTGGAGAAAAACACAG+TGG + chr7_2:54618339-54618358 Msa1063120:CDS 45.0%
!! TTCCTTCGGAACTGTTTTGG+TGG + chr7_2:54618378-54618397 Msa1063120:CDS 45.0%
TACCACCAAAACAGTTCCGA+AGG - chr7_2:54618383-54618402 None:intergenic 45.0%
GGTGGTATATGCATAAGGCT+TGG + chr7_2:54618396-54618415 Msa1063120:CDS 45.0%
GATGCGTCGGAAGAAGTTAA+AGG + chr7_2:54618450-54618469 Msa1063120:CDS 45.0%
AGTGGCGCAATATCATTGCT+TGG + chr7_2:54618550-54618569 Msa1063120:CDS 45.0%
GTGGCGCAATATCATTGCTT+GGG + chr7_2:54618551-54618570 Msa1063120:CDS 45.0%
! ATATTTCTGCTGCTGAGTCC+GGG + chr7_2:54618607-54618626 Msa1063120:CDS 45.0%
CGGGAGCAATAACAATAACC+AGG + chr7_2:54618626-54618645 Msa1063120:CDS 45.0%
! TGAGACTACTCGTATTGACC+TGG - chr7_2:54618647-54618666 None:intergenic 45.0%
TCAATACGAGTAGTCTCAGC+CGG + chr7_2:54618649-54618668 Msa1063120:CDS 45.0%
!! TCGGCTGCTTTGATTTTCGA+TGG + chr7_2:54618681-54618700 Msa1063120:CDS 45.0%
!! CGATGGATTGGTTTGTTGTG+CGG + chr7_2:54618698-54618717 Msa1063120:CDS 45.0%
GGCTGATGTGAAGCTTCTTA+AGG + chr7_2:54618719-54618738 Msa1063120:CDS 45.0%
GAAGATGAGTAACCAGGAGT+TGG + chr7_2:54618767-54618786 Msa1063120:CDS 45.0%
!!! CGCGCGCATTTTTTATTCTG+CGG + chr7_2:54618880-54618899 Msa1063120:CDS 45.0%
!!! GCGCGCATTTTTTATTCTGC+GGG + chr7_2:54618881-54618900 Msa1063120:CDS 45.0%
CTAGACGACCCTTGAAAAGA+TGG - chr7_2:54618923-54618942 None:intergenic 45.0%
AAACAGTCTGCACAAGAGTG+AGG - chr7_2:54619004-54619023 None:intergenic 45.0%
!!! GATATATATTTTATTATTTT+TGG + chr7_2:54612735-54612754 Msa1063120:intron 5.0%
TGTCGATCGGACCAAGACTT+AGG + chr7_2:54612102-54612121 Msa1063120:CDS 50.0%
GTCGATCGGACCAAGACTTA+GGG + chr7_2:54612103-54612122 Msa1063120:CDS 50.0%
TCGATCGGACCAAGACTTAG+GGG + chr7_2:54612104-54612123 Msa1063120:CDS 50.0%
TCTCTCCTTCCCCTAAGTCT+TGG - chr7_2:54612116-54612135 None:intergenic 50.0%
AGCAATGCAGTGATGCCGTT+TGG + chr7_2:54612210-54612229 Msa1063120:CDS 50.0%
! GCAATGCAGTGATGCCGTTT+GGG + chr7_2:54612211-54612230 Msa1063120:CDS 50.0%
CTAGGCGGAAATAAACGGCT+TGG - chr7_2:54612371-54612390 None:intergenic 50.0%
CGGGACTAGGCGGAAATAAA+CGG - chr7_2:54612376-54612395 None:intergenic 50.0%
! GGAGAACCAGATCCCCTTTT+TGG + chr7_2:54612445-54612464 Msa1063120:CDS 50.0%
GTGTGTGTTCCATCCGATGT+GGG - chr7_2:54612626-54612645 None:intergenic 50.0%
TGTGTGTGTTCCATCCGATG+TGG - chr7_2:54612627-54612646 None:intergenic 50.0%
GCTCGTTAACACAAGCTGGA+GGG - chr7_2:54613204-54613223 None:intergenic 50.0%
AGCTCGTTAACACAAGCTGG+AGG - chr7_2:54613205-54613224 None:intergenic 50.0%
GCACAATAGCGAGAACAGAC+GGG - chr7_2:54613825-54613844 None:intergenic 50.0%
! ATTGGTGGTCACGCAACTTG+TGG + chr7_2:54614106-54614125 Msa1063120:intron 50.0%
TGGAGCCTTCACCTGCAATA+TGG + chr7_2:54614162-54614181 Msa1063120:intron 50.0%
GGAGCCTTCACCTGCAATAT+GGG + chr7_2:54614163-54614182 Msa1063120:intron 50.0%
CAGCTTGGCAGTTACCTTCA+CGG - chr7_2:54614400-54614419 None:intergenic 50.0%
GGGTCATAGCGTTCAGGAAT+CGG + chr7_2:54614436-54614455 Msa1063120:intron 50.0%
ATAGCGTTCAGGAATCGGTC+TGG + chr7_2:54614441-54614460 Msa1063120:intron 50.0%
! CTTAGTTTGGCGGCATAGGA+TGG + chr7_2:54614637-54614656 Msa1063120:intron 50.0%
TTGTGGAAGATCCAGGTTCG+AGG - chr7_2:54615855-54615874 None:intergenic 50.0%
GAACCTGGATCTTCCACAAC+CGG + chr7_2:54615856-54615875 Msa1063120:intron 50.0%
AAACCGGTTGTGGAAGATCC+AGG - chr7_2:54615862-54615881 None:intergenic 50.0%
ACCCAGATTCAAGGGAAGCA+AGG + chr7_2:54617645-54617664 Msa1063120:CDS 50.0%
GGGAATGTGGTGAAGCCATA+TGG + chr7_2:54617761-54617780 Msa1063120:CDS 50.0%
AGCACTTTAGATGCGGGACT+GGG - chr7_2:54617940-54617959 None:intergenic 50.0%
!! CCCGCATCTAAAGTGCTGAA+AGG + chr7_2:54617943-54617962 Msa1063120:CDS 50.0%
! TCCTGAACCAGAGTATCTGG+AGG + chr7_2:54618059-54618078 Msa1063120:CDS 50.0%
! TCCTCCAGATACTCTGGTTC+AGG - chr7_2:54618063-54618082 None:intergenic 50.0%
!! CAGCGCTTTAGTTTGGGCTT+CGG - chr7_2:54618282-54618301 None:intergenic 50.0%
CGATGCACAGCGCTTTAGTT+TGG - chr7_2:54618289-54618308 None:intergenic 50.0%
!! AACTAAAGCGCTGTGCATCG+AGG + chr7_2:54618289-54618308 Msa1063120:CDS 50.0%
GGGGTGACTATCAAACTTGC+TGG + chr7_2:54618324-54618343 Msa1063120:CDS 50.0%
CAACTTTGTTGCTGCGATGC+TGG + chr7_2:54618974-54618993 Msa1063120:CDS 50.0%
TCGGACCAAGACTTAGGGGA+AGG + chr7_2:54612108-54612127 Msa1063120:CDS 55.0%
ACTTCAGTTGCGGGACTAGG+CGG - chr7_2:54612386-54612405 None:intergenic 55.0%
AGCACTTCAGTTGCGGGACT+AGG - chr7_2:54612389-54612408 None:intergenic 55.0%
AGTGGAAGTCCCACATCGGA+TGG + chr7_2:54612614-54612633 Msa1063120:intron 55.0%
CCAGATGGCAGAACGACGTA+TGG - chr7_2:54613929-54613948 None:intergenic 55.0%
CCATACGTCGTTCTGCCATC+TGG + chr7_2:54613926-54613945 Msa1063120:intron 55.0%
GTGGTCACGCAACTTGTGGT+GGG + chr7_2:54614110-54614129 Msa1063120:intron 55.0%
GCAGGTGAAGGCTCCAAGAA+AGG - chr7_2:54614158-54614177 None:intergenic 55.0%
CGTTCAGGAATCGGTCTGGT+TGG + chr7_2:54614445-54614464 Msa1063120:intron 55.0%
TGTTGACCCGTGCGATAGCA+CGG - chr7_2:54614848-54614867 None:intergenic 55.0%
GCTCTCCTGCTCGATGTAAC+AGG - chr7_2:54617717-54617736 None:intergenic 55.0%
CAGCACTTTAGATGCGGGAC+TGG - chr7_2:54617941-54617960 None:intergenic 55.0%
GGTCCGATCGACACCTTCCT+TGG - chr7_2:54612095-54612114 None:intergenic 60.0%
GGTGGTCACGCAACTTGTGG+TGG + chr7_2:54614109-54614128 Msa1063120:intron 60.0%
TTGCCATGGAGTCTGCGGCT+CGG + chr7_2:54614227-54614246 Msa1063120:intron 60.0%
ATTCCGAGCCGCAGACTCCA+TGG - chr7_2:54614233-54614252 None:intergenic 60.0%
! ATGGAGTCTGCGGCTCGGAA+TGG + chr7_2:54614232-54614251 Msa1063120:intron 60.0%
! AGTCTGCGGCTCGGAATGGT+TGG + chr7_2:54614236-54614255 Msa1063120:intron 60.0%
! TCACGGGGTGCCAACCTAGT+TGG + chr7_2:54614665-54614684 Msa1063120:intron 60.0%
! CACGGGGTGCCAACCTAGTT+GGG + chr7_2:54614666-54614685 Msa1063120:intron 60.0%
GTTGACCCGTGCGATAGCAC+GGG - chr7_2:54614847-54614866 None:intergenic 60.0%
ACATCGAGCAGGAGAGCCGA+AGG + chr7_2:54617720-54617739 Msa1063120:CDS 60.0%
GGAGGACATGAAGGACGGAG+CGG + chr7_2:54618077-54618096 Msa1063120:CDS 60.0%
TGCATCGAGGCTCCAAGCTG+CGG + chr7_2:54618302-54618321 Msa1063120:CDS 60.0%
TGATAGTCACCCCCGCAGCT+TGG - chr7_2:54618317-54618336 None:intergenic 60.0%
!! CGTGCGATAGCACGGGTTGG+CGG - chr7_2:54614840-54614859 None:intergenic 65.0%
CGCCAACCCGTGCTATCGCA+CGG + chr7_2:54614838-54614857 Msa1063120:intron 65.0%
GCCAACCCGTGCTATCGCAC+GGG + chr7_2:54614839-54614858 Msa1063120:intron 65.0%
ACCCGTGCGATAGCACGGGT+TGG - chr7_2:54614843-54614862 None:intergenic 65.0%
GCATCGAGGCTCCAAGCTGC+GGG + chr7_2:54618303-54618322 Msa1063120:CDS 65.0%
CATCGAGGCTCCAAGCTGCG+GGG + chr7_2:54618304-54618323 Msa1063120:CDS 65.0%
ATCGAGGCTCCAAGCTGCGG+GGG + chr7_2:54618305-54618324 Msa1063120:CDS 65.0%
CTGGGTGAGCGCAACCGGCT+TGG - chr7_2:54617922-54617941 None:intergenic 70.0%
CGGGACTGGGTGAGCGCAAC+CGG - chr7_2:54617927-54617946 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 54611951 54619055 54611951 ID=Msa1063120;Name=Msa1063120
chr7_2 mRNA 54611951 54619055 54611951 ID=Msa1063120-mRNA-1;Parent=Msa1063120;Name=Msa1063120-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|2|0|708
chr7_2 exon 54611951 54612466 54611951 ID=Msa1063120-mRNA-1:exon:10038;Parent=Msa1063120-mRNA-1
chr7_2 exon 54617445 54619055 54617445 ID=Msa1063120-mRNA-1:exon:10039;Parent=Msa1063120-mRNA-1
chr7_2 CDS 54611951 54612466 54611951 ID=Msa1063120-mRNA-1:cds;Parent=Msa1063120-mRNA-1
chr7_2 CDS 54617445 54619055 54617445 ID=Msa1063120-mRNA-1:cds;Parent=Msa1063120-mRNA-1
Gene Sequence

>Msa1063120

ATGGCCAATCTAACAACGAAAAGTGAGTGGTTACAATCTATAGAAACATCGCTAACATCTGAAGACTATGATTATGTTCAATCAAACAACATTTCAGTGGTTCCAGAAGGACTTAAAAAATGGAACGAGGATGCTTACATTCCAAGGAAGGTGTCGATCGGACCAAGACTTAGGGGAAGGAGAGAAGACCTTTTGCTTATGGAAGAGGTCAAACTACGATGCATGTTGTCTCTTCTTAACCGAGCAGATAAAAGCTTGGAGCAATGCAGTGATGCCGTTTGGGAATTAGATAAAGAGGTTCGTGAATGCTATCTAGGAGACCTTAAACTCGAACGACATGAACTCGCTAAAATTATGTTAGTGGATGGATGTTTTCTGTTGGAGCTTCTCATATCAAAGGGATTAGATTCTCAACTTCCAAGCCGTTTATTTCCGCCTAGTCCCGCAACTGAAGTGCTGAAAGACGATGATGTTCTCTCTGATCTAATGTTGTTGGAGAACCAGATCCCCTTTTTGACCATGGCCAATTATCAAGTACTGAGCTATGACGAAGCAAGGGATGAAACCAACATGAATGAATGGTTAAATTCTATAGACATGTTGCTGACATCTGTGGACTTCAACTATATTCAATCATGTAGCATTTCCATCGTTCCAGAAGAGCTTATAAACTCATCAAACAAAGAAGATTACTTGCCAAAGGTGGTTTCAATTGGACCCAGATTCAAGGGAAGCAAGGAAGACTTAAATCTCATGGAAGAAGTCAAATTACGCTCGATGATGTACCTGTTACATCGAGCAGGAGAGCCGAAGGATTCCCCAAAATACTTTCGGGAATGTGGTGAAGCCATATGGAAATCAGATGAACAAGTTCGAGCTAGTTATGTGTCTGACATTAAACTAGAAAAGAAAGAACTGGCAAAAATAATGTTAATGGATGGATGTTTTCTGTTGGAGCTTGTGATTACAAAAGGGTTCAATTCTAAACTTCCAAGCCGGTTGCGCTCACCCAGTCCCGCATCTAAAGTGCTGAAAGGCGATGATGTTCTGTCTGATCTTATGTTGTTGGAGAATCAAATACCAATTCTAGTACTCCACAAATTGTCACAAATACTTTTCCCTGATGAGTTTCCTGAACCAGAGTATCTGGAGGACATGAAGGACGGAGCGGAAAAGATTAATAATCTTATTCTGTCTATCATAGGCTACGCTCAGCCTGAAGTTCAAAATCCAAGCTACTTCAAAGCTCCTCATATTCTTGATATTGTCCACTTTTTCGTTAACAGAAAAGGTGAGACAAAAAGTGATGGGGTTGTTAATTATGTAGTGCCCATTATTGGTACTCAGCATCCGAAGCCCAAACTAAAGCGCTGTGCATCGAGGCTCCAAGCTGCGGGGGTGACTATCAAACTTGCTGGAGAAAAACACAGTGGCAATTCTTGCTTTAGTTTCCTTCGGAACTGTTTTGGTGGTATATGCATAAGGCTTGGCAATATGCTTGTCACAACTAATACTCAAGTGGATGCGTCGGAAGAAGTTAAAGGTTTGAACTTTTACTTCAACTTCGAAAAGGGGAAATTTGAAATTGCACGGTTAGAGATCACCAAAACAACGAAAGCAAAGTGGCGCAATATCATTGCTTGGGAGCATCATAAAAACAACTGGAAATGTTTTGAAAATATTTCTGCTGCTGAGTCCGGGAGCAATAACAATAACCAGGTCAATACGAGTAGTCTCAGCCGGAAATTTACTTCGGCTGCTTTGATTTTCGATGGATTGGTTTGTTGTGCGGCTGATGTGAAGCTTCTTAAGGACAAGAATATCATTGTGGATCATTTGAAGATGAGTAACCAGGAGTTGGAAGAGTTTTTTCATTCCATGTCGTTTGGAGTTGATCTTGGGATAGTTGATTCCAGTTATGTTAAAATTGTTGATGACTTGAACAATTACTCGCGCGCATTTTTTATTCTGCGGGTCTTGAAAATATTTTCCCATCTTTTCAAGGGTCGTCTAGAATGGCTTTTCAAGTTTTTGAAAAAAAACTACAACTTTGTTGCTGCGATGCTGGCTTTCCTCACTCTTGTGCAGACTGTTTATACAGTCATATCCTACCATTTACCCAAATAA
Protein sequence

>Msa1063120

MANLTTKSEWLQSIETSLTSEDYDYVQSNNISVVPEGLKKWNEDAYIPRKVSIGPRLRGRREDLLLMEEVKLRCMLSLLNRADKSLEQCSDAVWELDKEVRECYLGDLKLERHELAKIMLVDGCFLLELLISKGLDSQLPSRLFPPSPATEVLKDDDVLSDLMLLENQIPFLTMANYQVLSYDEARDETNMNEWLNSIDMLLTSVDFNYIQSCSISIVPEELINSSNKEDYLPKVVSIGPRFKGSKEDLNLMEEVKLRSMMYLLHRAGEPKDSPKYFRECGEAIWKSDEQVRASYVSDIKLEKKELAKIMLMDGCFLLELVITKGFNSKLPSRLRSPSPASKVLKGDDVLSDLMLLENQIPILVLHKLSQILFPDEFPEPEYLEDMKDGAEKINNLILSIIGYAQPEVQNPSYFKAPHILDIVHFFVNRKGETKSDGVVNYVVPIIGTQHPKPKLKRCASRLQAAGVTIKLAGEKHSGNSCFSFLRNCFGGICIRLGNMLVTTNTQVDASEEVKGLNFYFNFEKGKFEIARLEITKTTKAKWRNIIAWEHHKNNWKCFENISAAESGSNNNNQVNTSSLSRKFTSAALIFDGLVCCAADVKLLKDKNIIVDHLKMSNQELEEFFHSMSFGVDLGIVDSSYVKIVDDLNNYSRAFFILRVLKIFSHLFKGRLEWLFKFLKKNYNFVAAMLAFLTLVQTVYTVISYHLPK*