Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0632370 | XP_003604976.1 | 97.471 | 435 | 11 | 0 | 1 | 435 | 1 | 435 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0632370 | sp|C8YNG6|KAT1_PETHY | 80.909 | 440 | 78 | 1 | 1 | 434 | 1 | 440 | 0.0 | 724 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0632370 | G7JUJ9 | 97.471 | 435 | 11 | 0 | 1 | 435 | 1 | 435 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0632370 | 0.815165 | 1.063020e-51 | -8.615850e-47 |
| Msa0007990 | Msa0632370 | 0.802010 | 6.872257e-49 | -8.615850e-47 |
| Msa0027820 | Msa0632370 | 0.808015 | 3.811486e-50 | -8.615850e-47 |
| Msa0035120 | Msa0632370 | 0.808872 | 2.502059e-50 | -8.615850e-47 |
| Msa0045790 | Msa0632370 | 0.809878 | 1.522112e-50 | -8.615850e-47 |
| Msa0046160 | Msa0632370 | 0.807618 | 4.628452e-50 | -8.615850e-47 |
| Msa0061340 | Msa0632370 | 0.808985 | 2.366444e-50 | -8.615850e-47 |
| Msa0078640 | Msa0632370 | 0.815213 | 1.037073e-51 | -8.615850e-47 |
| Msa0103250 | Msa0632370 | 0.814175 | 1.761456e-51 | -8.615850e-47 |
| Msa0103770 | Msa0632370 | 0.821941 | 3.089418e-53 | -8.615850e-47 |
| Msa0106620 | Msa0632370 | 0.816842 | 4.490264e-52 | -8.615850e-47 |
| Msa0108410 | Msa0632370 | 0.806041 | 9.970776e-50 | -8.615850e-47 |
| Msa0626450 | Msa0632370 | 0.830346 | 3.092808e-55 | -8.615850e-47 |
| Msa0626490 | Msa0632370 | 0.827890 | 1.218459e-54 | -8.615850e-47 |
| Msa0632370 | Msa0664600 | 0.832754 | 7.891223e-56 | -8.615850e-47 |
| Msa0632370 | Msa0667770 | 0.801367 | 9.309172e-49 | -8.615850e-47 |
| Msa0632370 | Msa0678130 | 0.800890 | 1.165727e-48 | -8.615850e-47 |
| Msa0632370 | Msa0709410 | 0.803190 | 3.923924e-49 | -8.615850e-47 |
| Msa0632370 | Msa0713510 | 0.846609 | 1.951001e-59 | -8.615850e-47 |
| Msa0632370 | Msa0715420 | 0.822389 | 2.431392e-53 | -8.615850e-47 |
| Msa0632370 | Msa0733010 | 0.821436 | 4.041272e-53 | -8.615850e-47 |
| Msa0632370 | Msa0738240 | 0.801786 | 7.639109e-49 | -8.615850e-47 |
| Msa0632370 | Msa0751260 | 0.833457 | 5.274384e-56 | -8.615850e-47 |
| Msa0632370 | Msa0760560 | 0.801816 | 7.531812e-49 | -8.615850e-47 |
| Msa0632370 | Msa0789100 | 0.812125 | 4.961619e-51 | -8.615850e-47 |
| Msa0632370 | Msa0795070 | 0.827871 | 1.231274e-54 | -8.615850e-47 |
| Msa0632370 | Msa0795870 | 0.808278 | 3.349542e-50 | -8.615850e-47 |
| Msa0632370 | Msa0828240 | 0.821945 | 3.082188e-53 | -8.615850e-47 |
| Msa0632370 | Msa0833530 | 0.812029 | 5.206719e-51 | -8.615850e-47 |
| Msa0632370 | Msa0833650 | 0.805126 | 1.551334e-49 | -8.615850e-47 |
| Msa0632370 | Msa0836850 | 0.800052 | 1.726911e-48 | -8.615850e-47 |
| Msa0632370 | Msa0861600 | 0.802653 | 5.065065e-49 | -8.615850e-47 |
| Msa0632370 | Msa0896440 | 0.800181 | 1.625816e-48 | -8.615850e-47 |
| Msa0632370 | Msa0899970 | 0.846530 | 2.049635e-59 | -8.615850e-47 |
| Msa0632370 | Msa0965080 | 0.844364 | 7.912969e-59 | -8.615850e-47 |
| Msa0632370 | Msa0965290 | 0.854085 | 1.556400e-61 | -8.615850e-47 |
| Msa0632370 | Msa0967870 | 0.822831 | 1.918958e-53 | -8.615850e-47 |
| Msa0632370 | Msa0999680 | 0.858427 | 8.300962e-63 | -8.615850e-47 |
| Msa0632370 | Msa1022820 | 0.804457 | 2.140500e-49 | -8.615850e-47 |
| Msa0632370 | Msa1027990 | 0.803914 | 2.776743e-49 | -8.615850e-47 |
| Msa0632370 | Msa1028280 | 0.807636 | 4.588718e-50 | -8.615850e-47 |
| Msa0632370 | Msa1034500 | 0.839850 | 1.237900e-57 | -8.615850e-47 |
| Msa0632370 | Msa1063120 | 0.802745 | 4.849353e-49 | -8.615850e-47 |
| Msa0632370 | Msa1068570 | 0.802877 | 4.553708e-49 | -8.615850e-47 |
| Msa0632370 | Msa1080960 | 0.817049 | 4.032819e-52 | -8.615850e-47 |
| Msa0632370 | Msa1088410 | 0.801817 | 7.527605e-49 | -8.615850e-47 |
| Msa0632370 | Msa1089450 | 0.811714 | 6.097181e-51 | -8.615850e-47 |
| Msa0632370 | Msa1104560 | 0.802663 | 5.040879e-49 | -8.615850e-47 |
| Msa0632370 | Msa1112380 | 0.841515 | 4.534148e-58 | -8.615850e-47 |
| Msa0632370 | Msa1124950 | 0.833437 | 5.336590e-56 | -8.615850e-47 |
| Msa0632370 | Msa1132840 | 0.809065 | 2.274552e-50 | -8.615850e-47 |
| Msa0632370 | Msa1145810 | 0.823842 | 1.114116e-53 | -8.615850e-47 |
| Msa0632370 | Msa1155170 | -0.818636 | 1.767274e-52 | -8.615850e-47 |
| Msa0632370 | Msa1161810 | 0.815877 | 7.381205e-52 | -8.615850e-47 |
| Msa0632370 | Msa1162780 | 0.807084 | 6.006929e-50 | -8.615850e-47 |
| Msa0632370 | Msa1170350 | 0.804214 | 2.405406e-49 | -8.615850e-47 |
| Msa0632370 | Msa1175180 | 0.809519 | 1.818053e-50 | -8.615850e-47 |
| Msa0632370 | Msa1184120 | 0.812309 | 4.524384e-51 | -8.615850e-47 |
| Msa0632370 | Msa1186020 | 0.826177 | 3.129833e-54 | -8.615850e-47 |
| Msa0632370 | Msa1188180 | 0.806418 | 8.306372e-50 | -8.615850e-47 |
| Msa0632370 | Msa1204020 | 0.800188 | 1.620671e-48 | -8.615850e-47 |
| Msa0632370 | Msa1225860 | -0.812674 | 3.764777e-51 | -8.615850e-47 |
| Msa0632370 | Msa1228200 | 0.800391 | 1.473214e-48 | -8.615850e-47 |
| Msa0632370 | Msa1246360 | 0.811029 | 8.587797e-51 | -8.615850e-47 |
| Msa0632370 | Msa1277150 | 0.822621 | 2.147256e-53 | -8.615850e-47 |
| Msa0632370 | Msa1283740 | 0.807912 | 4.009302e-50 | -8.615850e-47 |
| Msa0632370 | Msa1297230 | 0.807565 | 4.751164e-50 | -8.615850e-47 |
| Msa0632370 | Msa1308870 | 0.809492 | 1.841983e-50 | -8.615850e-47 |
| Msa0632370 | Msa1320670 | 0.831126 | 1.991589e-55 | -8.615850e-47 |
| Msa0632370 | Msa1321050 | 0.813139 | 2.977494e-51 | -8.615850e-47 |
| Msa0632370 | Msa1345810 | 0.837852 | 4.069546e-57 | -8.615850e-47 |
| Msa0632370 | Msa1392580 | 0.805644 | 1.208160e-49 | -8.615850e-47 |
| Msa0632370 | Msa1393840 | -0.805516 | 1.285461e-49 | -8.615850e-47 |
| Msa0632370 | Msa1440960 | 0.825202 | 5.330057e-54 | -8.615850e-47 |
| Msa0632370 | Msa1444560 | 0.806941 | 6.442175e-50 | -8.615850e-47 |
| Msa0125650 | Msa0632370 | 0.823636 | 1.244993e-53 | -8.615850e-47 |
| Msa0149300 | Msa0632370 | 0.804597 | 2.001449e-49 | -8.615850e-47 |
| Msa0152400 | Msa0632370 | 0.817834 | 2.684625e-52 | -8.615850e-47 |
| Msa0170030 | Msa0632370 | 0.810905 | 9.134336e-51 | -8.615850e-47 |
| Msa0174450 | Msa0632370 | 0.800356 | 1.497751e-48 | -8.615850e-47 |
| Msa0187030 | Msa0632370 | 0.825496 | 4.542428e-54 | -8.615850e-47 |
| Msa0188150 | Msa0632370 | 0.801874 | 7.326862e-49 | -8.615850e-47 |
| Msa0204840 | Msa0632370 | 0.836405 | 9.537667e-57 | -8.615850e-47 |
| Msa0217700 | Msa0632370 | 0.800089 | 1.697133e-48 | -8.615850e-47 |
| Msa0225100 | Msa0632370 | 0.810065 | 1.387459e-50 | -8.615850e-47 |
| Msa0225220 | Msa0632370 | 0.812952 | 3.271787e-51 | -8.615850e-47 |
| Msa0225860 | Msa0632370 | 0.813340 | 2.689147e-51 | -8.615850e-47 |
| Msa0227340 | Msa0632370 | 0.820037 | 8.475386e-53 | -8.615850e-47 |
| Msa0237210 | Msa0632370 | 0.807752 | 4.335869e-50 | -8.615850e-47 |
| Msa0367870 | Msa0632370 | 0.814291 | 1.660584e-51 | -8.615850e-47 |
| Msa0378720 | Msa0632370 | 0.817369 | 3.416815e-52 | -8.615850e-47 |
| Msa0405130 | Msa0632370 | 0.809384 | 1.943246e-50 | -8.615850e-47 |
| Msa0430750 | Msa0632370 | 0.816677 | 4.889644e-52 | -8.615850e-47 |
| Msa0432160 | Msa0632370 | 0.806568 | 7.723160e-50 | -8.615850e-47 |
| Msa0434290 | Msa0632370 | 0.806073 | 9.819824e-50 | -8.615850e-47 |
| Msa0443020 | Msa0632370 | 0.810795 | 9.648985e-51 | -8.615850e-47 |
| Msa0463270 | Msa0632370 | 0.803710 | 3.060625e-49 | -8.615850e-47 |
| Msa0474730 | Msa0632370 | 0.825409 | 4.761982e-54 | -8.615850e-47 |
| Msa0476680 | Msa0632370 | 0.808567 | 2.907317e-50 | -8.615850e-47 |
| Msa0479200 | Msa0632370 | 0.802813 | 4.694287e-49 | -8.615850e-47 |
| Msa0240900 | Msa0632370 | 0.812627 | 3.854200e-51 | -8.615850e-47 |
| Msa0244640 | Msa0632370 | 0.822683 | 2.077593e-53 | -8.615850e-47 |
| Msa0244880 | Msa0632370 | 0.809302 | 2.023203e-50 | -8.615850e-47 |
| Msa0264830 | Msa0632370 | 0.819639 | 1.045041e-52 | -8.615850e-47 |
| Msa0266180 | Msa0632370 | 0.812025 | 5.217222e-51 | -8.615850e-47 |
| Msa0267790 | Msa0632370 | 0.820574 | 6.383314e-53 | -8.615850e-47 |
| Msa0283330 | Msa0632370 | 0.809377 | 1.950302e-50 | -8.615850e-47 |
| Msa0283470 | Msa0632370 | 0.815347 | 9.687774e-52 | -8.615850e-47 |
| Msa0287740 | Msa0632370 | 0.822560 | 2.219038e-53 | -8.615850e-47 |
| Msa0296870 | Msa0632370 | 0.802374 | 5.782148e-49 | -8.615850e-47 |
| Msa0302870 | Msa0632370 | 0.823571 | 1.289094e-53 | -8.615850e-47 |
| Msa0308460 | Msa0632370 | 0.801745 | 7.788359e-49 | -8.615850e-47 |
| Msa0311610 | Msa0632370 | 0.820832 | 5.568080e-53 | -8.615850e-47 |
| Msa0315690 | Msa0632370 | 0.816568 | 5.170715e-52 | -8.615850e-47 |
| Msa0317740 | Msa0632370 | 0.807850 | 4.132316e-50 | -8.615850e-47 |
| Msa0317970 | Msa0632370 | 0.828948 | 6.768146e-55 | -8.615850e-47 |
| Msa0340340 | Msa0632370 | 0.822402 | 2.414462e-53 | -8.615850e-47 |
| Msa0342010 | Msa0632370 | 0.821343 | 4.246478e-53 | -8.615850e-47 |
| Msa0358890 | Msa0632370 | 0.843486 | 1.360091e-58 | -8.615850e-47 |
| Msa0483100 | Msa0632370 | 0.829145 | 6.064142e-55 | -8.615850e-47 |
| Msa0506860 | Msa0632370 | 0.816289 | 5.970424e-52 | -8.615850e-47 |
| Msa0508880 | Msa0632370 | 0.806908 | 6.545061e-50 | -8.615850e-47 |
| Msa0521010 | Msa0632370 | 0.810287 | 1.242386e-50 | -8.615850e-47 |
| Msa0522150 | Msa0632370 | 0.823725 | 1.186791e-53 | -8.615850e-47 |
| Msa0575660 | Msa0632370 | 0.824662 | 7.149127e-54 | -8.615850e-47 |
| Msa0579660 | Msa0632370 | 0.833749 | 4.458717e-56 | -8.615850e-47 |
| Msa0580370 | Msa0632370 | 0.803105 | 4.085358e-49 | -8.615850e-47 |
| Msa0583360 | Msa0632370 | -0.805156 | 1.529447e-49 | -8.615850e-47 |
| Msa0592080 | Msa0632370 | 0.823974 | 1.037479e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0632370 | MtrunA17_Chr4g0010181 | 97.471 | 435 | 11 | 0 | 1 | 435 | 1 | 435 | 0.0 | 868 |
| Msa0632370 | MtrunA17_Chr1g0169681 | 76.417 | 441 | 97 | 2 | 1 | 434 | 1 | 441 | 0.0 | 668 |
| Msa0632370 | MtrunA17_Chr3g0078111 | 36.842 | 380 | 211 | 11 | 45 | 407 | 16 | 383 | 3.15e-59 | 199 |
| Msa0632370 | MtrunA17_Chr5g0448191 | 36.842 | 380 | 211 | 11 | 45 | 407 | 16 | 383 | 3.15e-59 | 199 |
| Msa0632370 | MtrunA17_Chr4g0076421 | 34.815 | 405 | 216 | 13 | 45 | 431 | 7 | 381 | 9.46e-53 | 181 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0632370 | AT2G33150.1 | 77.727 | 440 | 92 | 1 | 1 | 434 | 1 | 440 | 0.0 | 694 |
| Msa0632370 | AT1G04710.1 | 76.905 | 433 | 98 | 1 | 1 | 433 | 1 | 431 | 0.0 | 669 |
| Msa0632370 | AT5G48880.3 | 72.912 | 443 | 109 | 3 | 1 | 434 | 1 | 441 | 0.0 | 665 |
| Msa0632370 | AT5G48880.2 | 72.912 | 443 | 109 | 3 | 1 | 434 | 1 | 441 | 0.0 | 665 |
| Msa0632370 | AT5G48880.4 | 72.912 | 443 | 109 | 3 | 1 | 434 | 1 | 441 | 0.0 | 665 |
| Msa0632370 | AT5G48880.1 | 77.354 | 393 | 87 | 1 | 44 | 434 | 6 | 398 | 0.0 | 640 |
| Msa0632370 | AT5G48230.1 | 38.642 | 383 | 204 | 11 | 43 | 407 | 5 | 374 | 1.90e-65 | 215 |
| Msa0632370 | AT5G48230.2 | 38.583 | 381 | 203 | 11 | 45 | 407 | 12 | 379 | 1.08e-64 | 213 |
| Msa0632370 | AT5G47720.3 | 36.070 | 402 | 230 | 11 | 45 | 431 | 14 | 403 | 2.13e-64 | 213 |
| Msa0632370 | AT5G47720.1 | 36.070 | 402 | 230 | 11 | 45 | 431 | 14 | 403 | 2.13e-64 | 213 |
| Msa0632370 | AT5G47720.4 | 36.070 | 402 | 230 | 11 | 45 | 431 | 14 | 403 | 2.50e-64 | 213 |
| Msa0632370 | AT5G47720.2 | 36.070 | 402 | 230 | 11 | 45 | 431 | 14 | 403 | 2.50e-64 | 213 |
| Msa0632370 | AT5G47720.5 | 36.070 | 402 | 230 | 11 | 45 | 431 | 21 | 410 | 2.72e-64 | 213 |
Find 108 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAAACAACAAAGTTTAT+TGG | 0.154367 | 4_3:+16348856 | None:intergenic |
| TGTTTATTCTTGCAAGAAAT+TGG | 0.173153 | 4_3:-16349772 | Msa0632370:CDS |
| ACCAATAAACTTTGTTGTTT+TGG | 0.179070 | 4_3:-16348857 | Msa0632370:three_prime_UTR |
| TTAGATGAAGTAACTGAATT+TGG | 0.181174 | 4_3:+16354213 | None:intergenic |
| GAACCCACCTTTGTAGAAAT+TGG | 0.246097 | 4_3:+16351271 | None:intergenic |
| CCATTGACATTGACCTTTGT+TGG | 0.268053 | 4_3:+16349741 | None:intergenic |
| TTCCTATTCTTGGAATCTTC+AGG | 0.284215 | 4_3:-16350878 | Msa0632370:intron |
| AATGGTGGTGCCATGGCTTT+TGG | 0.285762 | 4_3:-16349723 | Msa0632370:CDS |
| AAGACAAATACTAGAAAATA+TGG | 0.292769 | 4_3:-16354280 | Msa0632370:exon |
| ATGACACAAGATAGTATTTC+GGG | 0.297886 | 4_3:-16352100 | Msa0632370:CDS |
| GAATTTGTGAAAATGAAATA+AGG | 0.305192 | 4_3:-16349023 | Msa0632370:three_prime_UTR |
| GTTTATTCTTGCAAGAAATT+GGG | 0.310704 | 4_3:-16349771 | Msa0632370:CDS |
| CAGGCTTCATTCTGTTCTGC+TGG | 0.312949 | 4_3:-16354080 | Msa0632370:CDS |
| AGAAGTGTGGCTGTGCAAAA+AGG | 0.329989 | 4_3:-16350903 | Msa0632370:CDS |
| TCTTATTTGATGAAGGAATT+GGG | 0.337864 | 4_3:-16352138 | Msa0632370:intron |
| TATCCGGCCAAACACAAATT+TGG | 0.341644 | 4_3:-16351126 | Msa0632370:CDS |
| TTCTGTTCTGCTGGACAAAC+TGG | 0.359206 | 4_3:-16354071 | Msa0632370:CDS |
| TCAATTGCTCTTTCTGATCC+TGG | 0.360216 | 4_3:+16352632 | None:intergenic |
| TATGACACAAGATAGTATTT+CGG | 0.364038 | 4_3:-16352101 | Msa0632370:CDS |
| GCCGCAGCTGCAACAGCATC+TGG | 0.368332 | 4_3:-16351316 | Msa0632370:CDS |
| AGATCTACCAAATTTGTGTT+TGG | 0.372134 | 4_3:+16351119 | None:intergenic |
| GCTATCTTACATGTCCTTTG+AGG | 0.379274 | 4_3:-16348901 | Msa0632370:three_prime_UTR |
| TGAAGGAATTGGGGCTGGAT+TGG | 0.386923 | 4_3:-16352128 | Msa0632370:intron |
| CTGCTGCACCATCGCTAACT+TGG | 0.389483 | 4_3:+16350943 | None:intergenic |
| ACAGAGGCAAGTAGATCATC+TGG | 0.390738 | 4_3:+16353397 | None:intergenic |
| AAGTTTGTGGATCCTAAAAC+TGG | 0.399124 | 4_3:-16351185 | Msa0632370:CDS |
| CCGAGACTGTCTTCTTCCTA+TGG | 0.405077 | 4_3:-16351508 | Msa0632370:CDS |
| CGTGGAAAGGATTGTCGCTT+TGG | 0.413346 | 4_3:-16349328 | Msa0632370:CDS |
| TGGTGTAGATCCTGCTGTCA+TGG | 0.432233 | 4_3:-16349986 | Msa0632370:CDS |
| TACATTTCAGGTTCTGGTAT+GGG | 0.444350 | 4_3:-16349177 | Msa0632370:intron |
| AAAGCTGGGTTCTATGACAT+TGG | 0.454280 | 4_3:-16352234 | Msa0632370:intron |
| CCAGCAGATTTCACTGCAGC+TGG | 0.456335 | 4_3:+16349940 | None:intergenic |
| ATGAAATAAGGAAAATAGAA+TGG | 0.457076 | 4_3:-16349011 | Msa0632370:three_prime_UTR |
| AATTTACCTGTGGCGCCTAA+AGG | 0.461966 | 4_3:+16349696 | None:intergenic |
| GAAGTAGGCGACATAGTTGT+AGG | 0.467982 | 4_3:-16352668 | Msa0632370:CDS |
| TTTCTGTTGACGATGGTATC+CGG | 0.468058 | 4_3:-16351142 | Msa0632370:CDS |
| ATCAGCAACTGCTTGAAGTC+CGG | 0.469800 | 4_3:+16352272 | None:intergenic |
| ATACATTTCAGGTTCTGGTA+TGG | 0.474139 | 4_3:-16349178 | Msa0632370:intron |
| GAGAATGTTGCACAGCGTTA+CGG | 0.482335 | 4_3:-16351474 | Msa0632370:CDS |
| ACCAGATGCTGTTGCAGCTG+CGG | 0.484759 | 4_3:+16351315 | None:intergenic |
| CTATTTGCAAAGCAAAGCGC+GGG | 0.488111 | 4_3:-16353438 | Msa0632370:CDS |
| TTTGATGAAGGAATTGGGGC+TGG | 0.488144 | 4_3:-16352133 | Msa0632370:intron |
| ATGATGAATGATATAGAAAG+TGG | 0.488529 | 4_3:+16354338 | None:intergenic |
| GATCCTGCTGTCATGGGTGT+TGG | 0.497368 | 4_3:-16349979 | Msa0632370:CDS |
| CTACCAAATTTGTGTTTGGC+CGG | 0.498106 | 4_3:+16351123 | None:intergenic |
| GTCAATAGACAATGTTCGTC+CGG | 0.498701 | 4_3:-16352291 | Msa0632370:CDS |
| GGACATCCTTTAGGCGCCAC+AGG | 0.500067 | 4_3:-16349702 | Msa0632370:intron |
| TTCTTGATTACCTGCAGTTG+TGG | 0.502234 | 4_3:+16351061 | None:intergenic |
| TTTATTCTTGCAAGAAATTG+GGG | 0.506069 | 4_3:-16349770 | Msa0632370:CDS |
| GTTGCTGCTTACATAAAAGC+TGG | 0.510537 | 4_3:-16352249 | Msa0632370:CDS |
| CCAACAAAGGTCAATGTCAA+TGG | 0.513905 | 4_3:-16349741 | Msa0632370:CDS |
| CTTATTTGATGAAGGAATTG+GGG | 0.515706 | 4_3:-16352137 | Msa0632370:intron |
| GGTGTAATCTCGATGTGTAT+AGG | 0.516266 | 4_3:-16349307 | Msa0632370:intron |
| AGCTGCGGCAGTATTTGAAA+GGG | 0.523584 | 4_3:-16349154 | Msa0632370:CDS |
| CATAGGAAGAAGACAGTCTC+GGG | 0.526881 | 4_3:+16351509 | None:intergenic |
| GGTGTAGATCCTGCTGTCAT+GGG | 0.527409 | 4_3:-16349985 | Msa0632370:CDS |
| ATTTCATGCTTACAGCAGCC+TGG | 0.533043 | 4_3:+16351430 | None:intergenic |
| CGAGACTGTCTTCTTCCTAT+GGG | 0.538873 | 4_3:-16351507 | Msa0632370:CDS |
| GCAGCTGGAATAGCAAAAGC+TGG | 0.539208 | 4_3:+16349955 | None:intergenic |
| CCAGCTGCAGTGAAATCTGC+TGG | 0.541500 | 4_3:-16349940 | Msa0632370:CDS |
| GAGCTGCGGCAGTATTTGAA+AGG | 0.546535 | 4_3:-16349155 | Msa0632370:CDS |
| TGAGATGAAGCGCCGTGGAA+AGG | 0.550315 | 4_3:-16349341 | Msa0632370:CDS |
| TTGCTGCTTACATAAAAGCT+GGG | 0.552144 | 4_3:-16352248 | Msa0632370:CDS |
| AATCATTCCAATTTCTACAA+AGG | 0.553272 | 4_3:-16351278 | Msa0632370:intron |
| TACCTGAAGATTCCAAGAAT+AGG | 0.554484 | 4_3:+16350876 | None:intergenic |
| GAAATTAGGTCGAGTCTCAC+AGG | 0.560910 | 4_3:-16351342 | Msa0632370:intron |
| GGACCAACACCCATGACAGC+AGG | 0.561197 | 4_3:+16349976 | None:intergenic |
| GACAAGGCAGGAGCAAGACC+AGG | 0.566383 | 4_3:-16351448 | Msa0632370:CDS |
| ACTATGTCGCCTACTTCACT+TGG | 0.567748 | 4_3:+16352674 | None:intergenic |
| CCATAGGAAGAAGACAGTCT+CGG | 0.567982 | 4_3:+16351508 | None:intergenic |
| AAAGATGGAACCACAACTGC+AGG | 0.572568 | 4_3:-16351071 | Msa0632370:intron |
| AAAGTGGAACCAAGTGAAGT+AGG | 0.574418 | 4_3:-16352683 | Msa0632370:CDS |
| TCTACTTGCCTCTGTTCTCA+AGG | 0.581268 | 4_3:-16353389 | Msa0632370:intron |
| TAAAGGATGTCCAAAAGCCA+TGG | 0.584140 | 4_3:+16349713 | None:intergenic |
| CAATGTCAATGGTGGTGCCA+TGG | 0.590035 | 4_3:-16349730 | Msa0632370:CDS |
| TGTGATAGAGAAAACAAAAG+TGG | 0.593265 | 4_3:-16352699 | Msa0632370:CDS |
| AGGCAAGTAGATCATCTGGA+AGG | 0.593506 | 4_3:+16353401 | None:intergenic |
| TTCTCAGAAGTTATTCCCAT+AGG | 0.594952 | 4_3:+16351492 | None:intergenic |
| AAGAGCAATTGAGTGCAGAA+TGG | 0.597887 | 4_3:-16352621 | Msa0632370:CDS |
| GCGTTACGGTGTGACAAGGC+AGG | 0.598535 | 4_3:-16351460 | Msa0632370:CDS |
| TGTTCTGCTGGACAAACTGG+TGG | 0.599695 | 4_3:-16354068 | Msa0632370:CDS |
| GACATGTAAGATAGCAACAG+AGG | 0.606416 | 4_3:+16348909 | None:intergenic |
| CACAGCGTTACGGTGTGACA+AGG | 0.607695 | 4_3:-16351464 | Msa0632370:CDS |
| AGGTTCTGGTATGGGAGCTG+CGG | 0.612004 | 4_3:-16349169 | Msa0632370:CDS |
| TGACTTGTACGAAATAAATG+AGG | 0.612329 | 4_3:-16349899 | Msa0632370:intron |
| ATTACTGTTTCTGTTGACGA+TGG | 0.615568 | 4_3:-16351149 | Msa0632370:CDS |
| GCTATTTGCAAAGCAAAGCG+CGG | 0.625420 | 4_3:-16353439 | Msa0632370:CDS |
| GGCAAGTAGATCATCTGGAA+GGG | 0.629415 | 4_3:+16353402 | None:intergenic |
| ACATGTAAGATAGCAACAGA+GGG | 0.638270 | 4_3:+16348910 | None:intergenic |
| TTTCAATGTATATGAAAACA+CGG | 0.641484 | 4_3:+16354646 | None:intergenic |
| GACACAAGATAGTATTTCGG+GGG | 0.646224 | 4_3:-16352098 | Msa0632370:CDS |
| ACAAAGGTCAATGTCAATGG+TGG | 0.646397 | 4_3:-16349738 | Msa0632370:CDS |
| AATGCTAGCCAAGTTAGCGA+TGG | 0.655553 | 4_3:-16350951 | Msa0632370:CDS |
| TGTGGATCCTAAAACTGGAG+AGG | 0.664054 | 4_3:-16351180 | Msa0632370:CDS |
| CAAAGCGACAATCCTTTCCA+CGG | 0.667560 | 4_3:+16349329 | None:intergenic |
| GGTTCGCAAAACTAACCCAA+AGG | 0.669027 | 4_3:-16352077 | Msa0632370:intron |
| GCTGCGGCAGTATTTGAAAG+GGG | 0.675279 | 4_3:-16349153 | Msa0632370:CDS |
| ATTGGGGCTTGATCCAACAA+AGG | 0.682113 | 4_3:-16349754 | Msa0632370:CDS |
| TTGAATGAGATGAAGCGCCG+TGG | 0.683165 | 4_3:-16349346 | Msa0632370:CDS |
| AATGAGATAAAGAACAGTCA+CGG | 0.683526 | 4_3:+16348788 | None:intergenic |
| AGTAGTTACCTTGAGAACAG+AGG | 0.689998 | 4_3:+16353381 | None:intergenic |
| AAAACTTACAGAGAGATGAG+TGG | 0.693438 | 4_3:+16354185 | None:intergenic |
| TGTCTATTGACAGTTCGAAG+CGG | 0.694158 | 4_3:+16352303 | None:intergenic |
| ATTTGCAAAGCAAAGCGCGG+GGG | 0.694411 | 4_3:-16353436 | Msa0632370:CDS |
| GCTTCTCATGAAGAGAAGTG+TGG | 0.695464 | 4_3:-16350916 | Msa0632370:CDS |
| TGGTGGATCTGAAAATGATG+TGG | 0.696807 | 4_3:-16354051 | Msa0632370:CDS |
| TATTTGCAAAGCAAAGCGCG+GGG | 0.699462 | 4_3:-16353437 | Msa0632370:CDS |
| TGACACAAGATAGTATTTCG+GGG | 0.700265 | 4_3:-16352099 | Msa0632370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTCATAAGTTATTAT+CGG | - | chr4_3:16349506-16349525 | Msa0632370:intron | 10.0% |
| !!! | AACTTTTTCATTATTTTAAT+AGG | - | chr4_3:16351892-16351911 | Msa0632370:intron | 10.0% |
| !! | TAAATATAAACTTATAAAAC+AGG | - | chr4_3:16353112-16353131 | Msa0632370:intron | 10.0% |
| !! | TAATATTATTAATCATATAC+GGG | - | chr4_3:16353225-16353244 | Msa0632370:intron | 10.0% |
| !!! | AAGTCTTTTGTTATTTTTAT+GGG | - | chr4_3:16348838-16348857 | Msa0632370:three_prime_UTR | 15.0% |
| !!! | TAATTTTTTCAGTTTTGTTA+AGG | - | chr4_3:16349922-16349941 | Msa0632370:CDS | 15.0% |
| !!! | AATTTTTTCAGTTTTGTTAA+GGG | - | chr4_3:16349923-16349942 | Msa0632370:CDS | 15.0% |
| !! | ATTGGTTACTATAAAAAAAT+TGG | - | chr4_3:16350310-16350329 | Msa0632370:intron | 15.0% |
| !! | AACTTATCAACTATAAAAAA+TGG | - | chr4_3:16350642-16350661 | Msa0632370:intron | 15.0% |
| !! | ACTTATCAACTATAAAAAAT+GGG | - | chr4_3:16350643-16350662 | Msa0632370:intron | 15.0% |
| !!! | TAAATTATTTTCATGTAAGT+AGG | + | chr4_3:16351602-16351621 | None:intergenic | 15.0% |
| !! | ATAAAACTTAATTACAATCT+AGG | + | chr4_3:16351797-16351816 | None:intergenic | 15.0% |
| !! | AAGTAAAAAAAATGATTCAA+AGG | + | chr4_3:16351867-16351886 | None:intergenic | 15.0% |
| !! | AATCTATGAAAAGATTATAT+AGG | - | chr4_3:16352056-16352075 | Msa0632370:intron | 15.0% |
| !!! | ATTCTTTTTAATGTGAAATT+AGG | - | chr4_3:16352086-16352105 | Msa0632370:CDS | 15.0% |
| !!! | ATAACACTACAAATTTTAAA+AGG | + | chr4_3:16352215-16352234 | None:intergenic | 15.0% |
| !!! | ATTTGTGTAATTTTTACAAT+AGG | + | chr4_3:16353166-16353185 | None:intergenic | 15.0% |
| !! | TTGTAAAAATTACACAAATT+TGG | - | chr4_3:16353167-16353186 | Msa0632370:intron | 15.0% |
| !! | TTTCAATGTATATGAAAACA+CGG | + | chr4_3:16348799-16348818 | None:intergenic | 20.0% |
| !!! | CAAGTCTTTTGTTATTTTTA+TGG | - | chr4_3:16348837-16348856 | Msa0632370:three_prime_UTR | 20.0% |
| !! | AAGACAAATACTAGAAAATA+TGG | - | chr4_3:16349162-16349181 | Msa0632370:CDS | 20.0% |
| !! | AGTTCTTAGATTAATATTGA+AGG | - | chr4_3:16349427-16349446 | Msa0632370:intron | 20.0% |
| !!! | TAGTAATAGTTTGAAACAAA+AGG | + | chr4_3:16349827-16349846 | None:intergenic | 20.0% |
| !! | GATTATTGAACATTTATAAC+AGG | - | chr4_3:16350373-16350392 | Msa0632370:intron | 20.0% |
| !! | AAATATCTATAGAGTTCATT+TGG | - | chr4_3:16350609-16350628 | Msa0632370:intron | 20.0% |
| !! | TTTAGTTAGTTAGTTATCTA+GGG | - | chr4_3:16351430-16351449 | Msa0632370:intron | 20.0% |
| !!! | AGTATTTTACTTGTGTTTTT+AGG | - | chr4_3:16351459-16351478 | Msa0632370:CDS | 20.0% |
| !!! | TTTTAAAAGGAAATTCATCT+TGG | + | chr4_3:16352202-16352221 | None:intergenic | 20.0% |
| !!! | CATTTTGTTTATAAAGTTTG+TGG | - | chr4_3:16352244-16352263 | Msa0632370:CDS | 20.0% |
| !! | TTTCTTAGTAATTCATTTCA+TGG | + | chr4_3:16352745-16352764 | None:intergenic | 20.0% |
| !! | AAAATTGTTCCTAATTAGAT+AGG | - | chr4_3:16353340-16353359 | Msa0632370:intron | 20.0% |
| !!! | TTCACAGTTTTTAAATTTGA+AGG | + | chr4_3:16353408-16353427 | None:intergenic | 20.0% |
| !! | AACTAGAGATAATGAAATTT+CGG | + | chr4_3:16353861-16353880 | None:intergenic | 20.0% |
| !!! | TAATATTTTAGTGTACTCTT+TGG | + | chr4_3:16354023-16354042 | None:intergenic | 20.0% |
| !! | GAATTTGTGAAAATGAAATA+AGG | - | chr4_3:16354419-16354438 | Msa0632370:intron | 20.0% |
| !! | ATGAAATAAGGAAAATAGAA+TGG | - | chr4_3:16354431-16354450 | Msa0632370:intron | 20.0% |
| !! | AAAAAAAAAAAAGAAGAGAG+TGG | - | chr4_3:16354457-16354476 | Msa0632370:intron | 20.0% |
| !!! | TTCCCTATTTTTATAGTTGT+TGG | - | chr4_3:16349027-16349046 | Msa0632370:three_prime_UTR | 25.0% |
| !!! | TCCCTATTTTTATAGTTGTT+GGG | - | chr4_3:16349028-16349047 | Msa0632370:three_prime_UTR | 25.0% |
| ! | TCCCAACAACTATAAAAATA+GGG | + | chr4_3:16349032-16349051 | None:intergenic | 25.0% |
| ! | ATGATGAATGATATAGAAAG+TGG | + | chr4_3:16349107-16349126 | None:intergenic | 25.0% |
| ! | TTAGATGAAGTAACTGAATT+TGG | + | chr4_3:16349232-16349251 | None:intergenic | 25.0% |
| !! | ATTAATATTGAAGGTGTATC+TGG | - | chr4_3:16349436-16349455 | Msa0632370:intron | 25.0% |
| ! | TTAAATGTTAATGTCATGTG+CGG | - | chr4_3:16349535-16349554 | Msa0632370:intron | 25.0% |
| !!! | TTATCTGTTTTTGTTTGAAC+CGG | - | chr4_3:16350271-16350290 | Msa0632370:intron | 25.0% |
| !! | CACTTTTCTTACTCAATAAT+TGG | + | chr4_3:16350353-16350372 | None:intergenic | 25.0% |
| ! | CAATTATTGAGTAAGAAAAG+TGG | - | chr4_3:16350351-16350370 | Msa0632370:intron | 25.0% |
| ! | AGGATTTATCAATTGTATCT+GGG | - | chr4_3:16350393-16350412 | Msa0632370:intron | 25.0% |
| !!! | TTTTATTTCGAAACATACCT+TGG | + | chr4_3:16350592-16350611 | None:intergenic | 25.0% |
| ! | ATCAACTATAAAAAATGGGT+TGG | - | chr4_3:16350647-16350666 | Msa0632370:intron | 25.0% |
| !! | TCTTATTTGATGAAGGAATT+GGG | - | chr4_3:16351304-16351323 | Msa0632370:CDS | 25.0% |
| ! | TATGACACAAGATAGTATTT+CGG | - | chr4_3:16351341-16351360 | Msa0632370:intron | 25.0% |
| ! | AACTAAAGAGGTTATTTATC+AGG | + | chr4_3:16351417-16351436 | None:intergenic | 25.0% |
| ! | AGATAACTAACTAACTAAAG+AGG | + | chr4_3:16351429-16351448 | None:intergenic | 25.0% |
| ! | CTTTAGTTAGTTAGTTATCT+AGG | - | chr4_3:16351429-16351448 | Msa0632370:intron | 25.0% |
| ! | AAATTAGAAAAGCAATTGTC+TGG | - | chr4_3:16351491-16351510 | Msa0632370:CDS | 25.0% |
| ! | AATTAGAAAAGCAATTGTCT+GGG | - | chr4_3:16351492-16351511 | Msa0632370:CDS | 25.0% |
| !!! | TATGAAGAACTTTTGAAATG+AGG | + | chr4_3:16351559-16351578 | None:intergenic | 25.0% |
| ! | CAGCTTATGAATAATAGATA+AGG | - | chr4_3:16351701-16351720 | Msa0632370:intron | 25.0% |
| ! | CTTATGAATAATAGATAAGG+AGG | - | chr4_3:16351704-16351723 | Msa0632370:intron | 25.0% |
| ! | ATGATTCAAAGGAAAATATG+TGG | + | chr4_3:16351856-16351875 | None:intergenic | 25.0% |
| ! | AATCATTCCAATTTCTACAA+AGG | - | chr4_3:16352164-16352183 | Msa0632370:intron | 25.0% |
| !! | CTCTTCTTTTGCTAAATTTT+GGG | - | chr4_3:16352406-16352425 | Msa0632370:intron | 25.0% |
| ! | TGCAGTTAAATATAGTTAGA+GGG | + | chr4_3:16352468-16352487 | None:intergenic | 25.0% |
| ! | TCTAACTATATTTAACTGCA+GGG | - | chr4_3:16352468-16352487 | Msa0632370:intron | 25.0% |
| ! | AATGTTTACTCGTATCATTA+TGG | + | chr4_3:16352594-16352613 | None:intergenic | 25.0% |
| ! | TTCTAATACATTTAGAGACA+TGG | - | chr4_3:16352791-16352810 | Msa0632370:intron | 25.0% |
| ! | CTGCTTCTATAGTTTAAATT+AGG | + | chr4_3:16352996-16353015 | None:intergenic | 25.0% |
| ! | TTTGATTATGCACATCTAAT+AGG | - | chr4_3:16353032-16353051 | Msa0632370:intron | 25.0% |
| ! | ACTTTATGTTGCTATGATAA+AGG | - | chr4_3:16353263-16353282 | Msa0632370:intron | 25.0% |
| ! | TGTTTATTCTTGCAAGAAAT+TGG | - | chr4_3:16353670-16353689 | Msa0632370:intron | 25.0% |
| ! | GTTTATTCTTGCAAGAAATT+GGG | - | chr4_3:16353671-16353690 | Msa0632370:intron | 25.0% |
| ! | TTTATTCTTGCAAGAAATTG+GGG | - | chr4_3:16353672-16353691 | Msa0632370:intron | 25.0% |
| ! | AAATATCTCAAATTTACCTG+TGG | + | chr4_3:16353759-16353778 | None:intergenic | 25.0% |
| !! | ATTCTTTTTATCAGTGGAAA+TGG | + | chr4_3:16353813-16353832 | None:intergenic | 25.0% |
| !! | TGCAATATTCTTTTTATCAG+TGG | + | chr4_3:16353819-16353838 | None:intergenic | 25.0% |
| !! | TCCAATTTTTACTTCATTAG+TGG | + | chr4_3:16353923-16353942 | None:intergenic | 25.0% |
| ! | GTTTAATAAGAAGACATTGA+GGG | + | chr4_3:16354001-16354020 | None:intergenic | 25.0% |
| ! | GTACACTAAAATATTACGAA+TGG | - | chr4_3:16354027-16354046 | Msa0632370:intron | 25.0% |
| !!! | ATCTGTTTATTTTTCTCCTT+AGG | + | chr4_3:16354211-16354230 | None:intergenic | 25.0% |
| ! | TTTGTACTGTTATACATTTC+AGG | - | chr4_3:16354253-16354272 | Msa0632370:CDS | 25.0% |
| !!! | ACCAATAAACTTTGTTGTTT+TGG | - | chr4_3:16354585-16354604 | Msa0632370:intron | 25.0% |
| ! | ACCAAAACAACAAAGTTTAT+TGG | + | chr4_3:16354589-16354608 | None:intergenic | 25.0% |
| GTCCCAACAACTATAAAAAT+AGG | + | chr4_3:16349033-16349052 | None:intergenic | 30.0% | |
| ! | TTTTTATAGTTGTTGGGACT+TGG | - | chr4_3:16349034-16349053 | Msa0632370:three_prime_UTR | 30.0% |
| ! | TTTTATAGTTGTTGGGACTT+GGG | - | chr4_3:16349035-16349054 | Msa0632370:three_prime_UTR | 30.0% |
| !!! | TTGTTTTGTTTTTCACTTGC+AGG | - | chr4_3:16349343-16349362 | Msa0632370:CDS | 30.0% |
| TTTGATTACTATTCGTCAAC+TGG | - | chr4_3:16350083-16350102 | Msa0632370:intron | 30.0% | |
| AATTGTTAGAACAGCAAATC+CGG | + | chr4_3:16350293-16350312 | None:intergenic | 30.0% | |
| CAGGATTTATCAATTGTATC+TGG | - | chr4_3:16350392-16350411 | Msa0632370:intron | 30.0% | |
| ATTACTCATATGTCATAGCA+TGG | - | chr4_3:16350433-16350452 | Msa0632370:intron | 30.0% | |
| ! | AAAGTGAATCCTATGTTTTG+AGG | + | chr4_3:16350510-16350529 | None:intergenic | 30.0% |
| AAACATAGGATTCACTTTAG+CGG | - | chr4_3:16350512-16350531 | Msa0632370:intron | 30.0% | |
| TGTGATAGAGAAAACAAAAG+TGG | - | chr4_3:16350743-16350762 | Msa0632370:intron | 30.0% | |
| !!! | ACAAGCACATGCTATTTTAT+TGG | - | chr4_3:16350904-16350923 | Msa0632370:CDS | 30.0% |
| ! | ATATATCATGTGCGTGTTTT+TGG | + | chr4_3:16350987-16351006 | None:intergenic | 30.0% |
| TAGACTCTATTTACATGTCA+TGG | - | chr4_3:16351251-16351270 | Msa0632370:intron | 30.0% | |
| CAAATAAGAGGAAGAAGATT+AGG | + | chr4_3:16351293-16351312 | None:intergenic | 30.0% | |
| ! | TTCTTCCTCTTATTTGATGA+AGG | - | chr4_3:16351297-16351316 | Msa0632370:CDS | 30.0% |
| CAATTCCTTCATCAAATAAG+AGG | + | chr4_3:16351305-16351324 | None:intergenic | 30.0% | |
| ! | CTCTTATTTGATGAAGGAAT+TGG | - | chr4_3:16351303-16351322 | Msa0632370:CDS | 30.0% |
| CTTATTTGATGAAGGAATTG+GGG | - | chr4_3:16351305-16351324 | Msa0632370:CDS | 30.0% | |
| ATGACACAAGATAGTATTTC+GGG | - | chr4_3:16351342-16351361 | Msa0632370:intron | 30.0% | |
| GGAAAATATGTGGAATTGAT+AGG | + | chr4_3:16351846-16351865 | None:intergenic | 30.0% | |
| ATTCCAATTTCTACAAAGGT+GGG | - | chr4_3:16352168-16352187 | Msa0632370:intron | 30.0% | |
| AGATCTACCAAATTTGTGTT+TGG | + | chr4_3:16352326-16352345 | None:intergenic | 30.0% | |
| ! | GCTCTTCTTTTGCTAAATTT+TGG | - | chr4_3:16352405-16352424 | Msa0632370:intron | 30.0% |
| CTGCAGTTAAATATAGTTAG+AGG | + | chr4_3:16352469-16352488 | None:intergenic | 30.0% | |
| CTCTAACTATATTTAACTGC+AGG | - | chr4_3:16352467-16352486 | Msa0632370:intron | 30.0% | |
| ATACGAGTAAACATTCACTT+CGG | - | chr4_3:16352599-16352618 | Msa0632370:CDS | 30.0% | |
| TACTAAGAAAAGACACAATC+AGG | - | chr4_3:16352755-16352774 | Msa0632370:intron | 30.0% | |
| ATCCCTAAGTATTAATGACA+CGG | + | chr4_3:16352829-16352848 | None:intergenic | 30.0% | |
| AGGAAATCAGAGAAAATACA+AGG | - | chr4_3:16353052-16353071 | Msa0632370:intron | 30.0% | |
| !! | ATTTAATTAGCTTGTCCTAC+AGG | + | chr4_3:16353196-16353215 | None:intergenic | 30.0% |
| !!! | GAACAATTTTTGAAGCACAA+GGG | + | chr4_3:16353330-16353349 | None:intergenic | 30.0% |
| !! | CTAGCTTTTCCTATCTAATT+AGG | + | chr4_3:16353352-16353371 | None:intergenic | 30.0% |
| CTAATTAGATAGGAAAAGCT+AGG | - | chr4_3:16353350-16353369 | Msa0632370:intron | 30.0% | |
| AACTGTGAATTCAATGTTGT+AGG | - | chr4_3:16353419-16353438 | Msa0632370:CDS | 30.0% | |
| ! | TGACTTGTACGAAATAAATG+AGG | - | chr4_3:16353543-16353562 | Msa0632370:intron | 30.0% |
| AATGTGCAATAGAAAGTTGT+TGG | + | chr4_3:16353598-16353617 | None:intergenic | 30.0% | |
| ! | CTAAGCATTTACCAATTTTG+TGG | - | chr4_3:16353620-16353639 | Msa0632370:intron | 30.0% |
| GCCACTAATGAAGTAAAAAT+TGG | - | chr4_3:16353919-16353938 | Msa0632370:intron | 30.0% | |
| GGTTTAATAAGAAGACATTG+AGG | + | chr4_3:16354002-16354021 | None:intergenic | 30.0% | |
| !!! | TCCTACTGTCTTTTATTTTC+AGG | - | chr4_3:16354051-16354070 | Msa0632370:CDS | 30.0% |
| ACCTGAAAATAAAAGACAGT+AGG | + | chr4_3:16354055-16354074 | None:intergenic | 30.0% | |
| GTCTGCTTCAAAAAAAGAAA+TGG | + | chr4_3:16354184-16354203 | None:intergenic | 30.0% | |
| !! | TTTATTTTTCTCCTTAGGCA+TGG | + | chr4_3:16354206-16354225 | None:intergenic | 30.0% |
| TTAGTGTACAAAAACCTCAA+AGG | + | chr4_3:16354558-16354577 | None:intergenic | 30.0% | |
| GTCACGGTATATAAGAAAAA+GGG | + | chr4_3:16354641-16354660 | None:intergenic | 30.0% | |
| AGTCACGGTATATAAGAAAA+AGG | + | chr4_3:16354642-16354661 | None:intergenic | 30.0% | |
| AATGAGATAAAGAACAGTCA+CGG | + | chr4_3:16354657-16354676 | None:intergenic | 30.0% | |
| AAAACTTACAGAGAGATGAG+TGG | + | chr4_3:16349260-16349279 | None:intergenic | 35.0% | |
| ACCATACACACCTTCTATAT+CGG | + | chr4_3:16349584-16349603 | None:intergenic | 35.0% | |
| ! | GTATGGTGTTTTACACATGT+AGG | - | chr4_3:16349597-16349616 | Msa0632370:intron | 35.0% |
| CAACAGACATAACACAAACA+CGG | + | chr4_3:16349701-16349720 | None:intergenic | 35.0% | |
| ACGAAACATTGACATAGACA+TGG | + | chr4_3:16349725-16349744 | None:intergenic | 35.0% | |
| CTTCGTATTGAAGATGTGTT+TGG | - | chr4_3:16349754-16349773 | Msa0632370:CDS | 35.0% | |
| CTGAATCTAACTACATGTGT+CGG | + | chr4_3:16349799-16349818 | None:intergenic | 35.0% | |
| !! | GGATTTGCTGTTCTAACAAT+TGG | - | chr4_3:16350292-16350311 | Msa0632370:intron | 35.0% |
| TCTTACTCAATAATTGGCAG+TGG | + | chr4_3:16350347-16350366 | None:intergenic | 35.0% | |
| CAGATAACTCCTCAAAACAT+AGG | - | chr4_3:16350498-16350517 | Msa0632370:intron | 35.0% | |
| AACATAGGATTCACTTTAGC+GGG | - | chr4_3:16350513-16350532 | Msa0632370:intron | 35.0% | |
| TGAGGAAAACAGTTGTAGTT+TGG | - | chr4_3:16350548-16350567 | Msa0632370:intron | 35.0% | |
| ! | ATAGTTGTAGGCACAGTTTT+AGG | - | chr4_3:16350786-16350805 | Msa0632370:intron | 35.0% |
| AGAGACTGTAAAACTAACCT+GGG | + | chr4_3:16350866-16350885 | None:intergenic | 35.0% | |
| TAGAGACTGTAAAACTAACC+TGG | + | chr4_3:16350867-16350886 | None:intergenic | 35.0% | |
| ! | TTGCTGCTTACATAAAAGCT+GGG | - | chr4_3:16351194-16351213 | Msa0632370:intron | 35.0% |
| GATTAGGCCTAAACATTACA+AGG | + | chr4_3:16351277-16351296 | None:intergenic | 35.0% | |
| TGACACAAGATAGTATTTCG+GGG | - | chr4_3:16351343-16351362 | Msa0632370:intron | 35.0% | |
| TGCGACTTAAATGTACCTTT+GGG | + | chr4_3:16351383-16351402 | None:intergenic | 35.0% | |
| ATGCGACTTAAATGTACCTT+TGG | + | chr4_3:16351384-16351403 | None:intergenic | 35.0% | |
| ! | GGATTAGTGAGTGTTAACTT+TGG | - | chr4_3:16351725-16351744 | Msa0632370:intron | 35.0% |
| !! | GTGAGTGTTAACTTTGGTTT+TGG | - | chr4_3:16351731-16351750 | Msa0632370:intron | 35.0% |
| !!! | TGTTAACTTTGGTTTTGGAG+AGG | - | chr4_3:16351736-16351755 | Msa0632370:intron | 35.0% |
| !! | TTTTGGAGAGGAATTTAGAG+TGG | - | chr4_3:16351748-16351767 | Msa0632370:intron | 35.0% |
| ! | TTTGGAGAGGAATTTAGAGT+GGG | - | chr4_3:16351749-16351768 | Msa0632370:intron | 35.0% |
| TTCTCAGAAGTTATTCCCAT+AGG | + | chr4_3:16351953-16351972 | None:intergenic | 35.0% | |
| CATTCCAATTTCTACAAAGG+TGG | - | chr4_3:16352167-16352186 | Msa0632370:intron | 35.0% | |
| AAGTTTGTGGATCCTAAAAC+TGG | - | chr4_3:16352257-16352276 | Msa0632370:CDS | 35.0% | |
| !! | ATTACTGTTTCTGTTGACGA+TGG | - | chr4_3:16352293-16352312 | Msa0632370:CDS | 35.0% |
| AAGCCTGCATTCAAAAAAGA+TGG | - | chr4_3:16352356-16352375 | Msa0632370:intron | 35.0% | |
| !!! | GTTCCATCTTTTTTGAATGC+AGG | + | chr4_3:16352362-16352381 | None:intergenic | 35.0% |
| TTCCTATTCTTGGAATCTTC+AGG | - | chr4_3:16352564-16352583 | Msa0632370:intron | 35.0% | |
| TACCTGAAGATTCCAAGAAT+AGG | + | chr4_3:16352569-16352588 | None:intergenic | 35.0% | |
| TGACTAAAAAGACACGTTCA+TGG | + | chr4_3:16352692-16352711 | None:intergenic | 35.0% | |
| CGAATGTGTCTTATGTTAGT+TGG | - | chr4_3:16352713-16352732 | Msa0632370:intron | 35.0% | |
| AAGAAAAGACACAATCAGGA+AGG | - | chr4_3:16352759-16352778 | Msa0632370:intron | 35.0% | |
| ! | AGACCGTGTCATTAATACTT+AGG | - | chr4_3:16352823-16352842 | Msa0632370:intron | 35.0% |
| ! | GACCGTGTCATTAATACTTA+GGG | - | chr4_3:16352824-16352843 | Msa0632370:intron | 35.0% |
| CAATTTAACGCGAATGAAAG+TGG | + | chr4_3:16352961-16352980 | None:intergenic | 35.0% | |
| CACTTTCATTCGCGTTAAAT+TGG | - | chr4_3:16352959-16352978 | Msa0632370:intron | 35.0% | |
| CAGAGAAAATACAAGGACTA+AGG | - | chr4_3:16353059-16353078 | Msa0632370:intron | 35.0% | |
| TAAAACAGGCATCTAGATGT+AGG | - | chr4_3:16353126-16353145 | Msa0632370:intron | 35.0% | |
| AAAACAGGCATCTAGATGTA+GGG | - | chr4_3:16353127-16353146 | Msa0632370:intron | 35.0% | |
| !!! | GGAACAATTTTTGAAGCACA+AGG | + | chr4_3:16353331-16353350 | None:intergenic | 35.0% |
| !! | CTGTTATACATTTCAGGTTC+TGG | - | chr4_3:16354259-16354278 | Msa0632370:CDS | 35.0% |
| !! | ATACATTTCAGGTTCTGGTA+TGG | - | chr4_3:16354264-16354283 | Msa0632370:CDS | 35.0% |
| !! | TACATTTCAGGTTCTGGTAT+GGG | - | chr4_3:16354265-16354284 | Msa0632370:exon | 35.0% |
| ACATGTAAGATAGCAACAGA+GGG | + | chr4_3:16354535-16354554 | None:intergenic | 35.0% | |
| ACGGTATATAAGAAAAAGGG+AGG | + | chr4_3:16354638-16354657 | None:intergenic | 35.0% | |
| ! | TGGTGGATCTGAAAATGATG+TGG | - | chr4_3:16349391-16349410 | Msa0632370:intron | 40.0% |
| GTCAATGCTTCCGATATAGA+AGG | - | chr4_3:16349571-16349590 | Msa0632370:intron | 40.0% | |
| ! | TCCGATATAGAAGGTGTGTA+TGG | - | chr4_3:16349580-16349599 | Msa0632370:intron | 40.0% |
| CGTATTGAAGATGTGTTTGG+TGG | - | chr4_3:16349757-16349776 | Msa0632370:CDS | 40.0% | |
| AGTAGTTACCTTGAGAACAG+AGG | + | chr4_3:16350064-16350083 | None:intergenic | 40.0% | |
| ! | ACTGGTGTTGAGTATAGTGT+AGG | - | chr4_3:16350101-16350120 | Msa0632370:intron | 40.0% |
| TCTATGTCTTGACAACAGAG+TGG | + | chr4_3:16350198-16350217 | None:intergenic | 40.0% | |
| GCTCACGAATAAGAAATCTC+AGG | + | chr4_3:16350712-16350731 | None:intergenic | 40.0% | |
| AAAGTGGAACCAAGTGAAGT+AGG | - | chr4_3:16350759-16350778 | Msa0632370:intron | 40.0% | |
| TCAATTGCTCTTTCTGATCC+TGG | + | chr4_3:16350813-16350832 | None:intergenic | 40.0% | |
| AAGAGCAATTGAGTGCAGAA+TGG | - | chr4_3:16350821-16350840 | Msa0632370:intron | 40.0% | |
| ! | AGAATGGCTGCATTTTATGC+TGG | - | chr4_3:16350837-16350856 | Msa0632370:intron | 40.0% |
| CACAGTCTCTGCTTGAAAAT+TGG | + | chr4_3:16351119-16351138 | None:intergenic | 40.0% | |
| TGTCTATTGACAGTTCGAAG+CGG | + | chr4_3:16351142-16351161 | None:intergenic | 40.0% | |
| GTCAATAGACAATGTTCGTC+CGG | - | chr4_3:16351151-16351170 | Msa0632370:CDS | 40.0% | |
| ! | GTTGCTGCTTACATAAAAGC+TGG | - | chr4_3:16351193-16351212 | Msa0632370:intron | 40.0% |
| AAAGCTGGGTTCTATGACAT+TGG | - | chr4_3:16351208-16351227 | Msa0632370:intron | 40.0% | |
| !! | GTCATGGCCTTGTAATGTTT+AGG | - | chr4_3:16351267-16351286 | Msa0632370:intron | 40.0% |
| GACACAAGATAGTATTTCGG+GGG | - | chr4_3:16351344-16351363 | Msa0632370:intron | 40.0% | |
| ! | GCAATTGTCTGGGAGTTTTA+TGG | - | chr4_3:16351502-16351521 | Msa0632370:CDS | 40.0% |
| ! | ATTTAGAGTGGGAGAGAACT+AGG | - | chr4_3:16351760-16351779 | Msa0632370:intron | 40.0% |
| GAACCCACCTTTGTAGAAAT+TGG | + | chr4_3:16352174-16352193 | None:intergenic | 40.0% | |
| ! | TGTTTCTCCTCTCCAGTTTT+AGG | + | chr4_3:16352272-16352291 | None:intergenic | 40.0% |
| TTTCTGTTGACGATGGTATC+CGG | - | chr4_3:16352300-16352319 | Msa0632370:CDS | 40.0% | |
| TATCCGGCCAAACACAAATT+TGG | - | chr4_3:16352316-16352335 | Msa0632370:intron | 40.0% | |
| CTACCAAATTTGTGTTTGGC+CGG | + | chr4_3:16352322-16352341 | None:intergenic | 40.0% | |
| TTCTTGATTACCTGCAGTTG+TGG | + | chr4_3:16352384-16352403 | None:intergenic | 40.0% | |
| ACAACTGCAGGTAATCAAGA+AGG | - | chr4_3:16352383-16352402 | Msa0632370:intron | 40.0% | |
| TCCTTGTGCTCGGTTTAAAA+AGG | - | chr4_3:16352437-16352456 | Msa0632370:intron | 40.0% | |
| ! | TCCTTTTTAAACCGAGCACA+AGG | + | chr4_3:16352441-16352460 | None:intergenic | 40.0% |
| CAAAAAGGGCTTCCTATTCT+TGG | - | chr4_3:16352554-16352573 | Msa0632370:intron | 40.0% | |
| !! | ACACAAATTTGGTGTCCTGT+AGG | - | chr4_3:16353178-16353197 | Msa0632370:intron | 40.0% |
| CCTACACAAGACCACAAAAT+TGG | + | chr4_3:16353634-16353653 | None:intergenic | 40.0% | |
| !!! | CCAATTTTGTGGTCTTGTGT+AGG | - | chr4_3:16353631-16353650 | Msa0632370:intron | 40.0% |
| CCATTGACATTGACCTTTGT+TGG | + | chr4_3:16353704-16353723 | None:intergenic | 40.0% | |
| CCAACAAAGGTCAATGTCAA+TGG | - | chr4_3:16353701-16353720 | Msa0632370:intron | 40.0% | |
| ACAAAGGTCAATGTCAATGG+TGG | - | chr4_3:16353704-16353723 | Msa0632370:intron | 40.0% | |
| TAAAGGATGTCCAAAAGCCA+TGG | + | chr4_3:16353732-16353751 | None:intergenic | 40.0% | |
| ! | ATGGCTTTTGGACATCCTTT+AGG | - | chr4_3:16353731-16353750 | Msa0632370:intron | 40.0% |
| TACTTCATTAGTGGCTCGAA+TGG | + | chr4_3:16353914-16353933 | None:intergenic | 40.0% | |
| GGTGTAATCTCGATGTGTAT+AGG | - | chr4_3:16354135-16354154 | Msa0632370:intron | 40.0% | |
| GACATGTAAGATAGCAACAG+AGG | + | chr4_3:16354536-16354555 | None:intergenic | 40.0% | |
| GCTATCTTACATGTCCTTTG+AGG | - | chr4_3:16354541-16354560 | Msa0632370:intron | 40.0% | |
| TTCTGTTCTGCTGGACAAAC+TGG | - | chr4_3:16349371-16349390 | Msa0632370:CDS | 45.0% | |
| GACATGACGCTAACACATGT+AGG | - | chr4_3:16349627-16349646 | Msa0632370:intron | 45.0% | |
| TGACGCTAACACATGTAGGT+AGG | - | chr4_3:16349631-16349650 | Msa0632370:intron | 45.0% | |
| GCTATTTGCAAAGCAAAGCG+CGG | - | chr4_3:16350003-16350022 | Msa0632370:CDS | 45.0% | |
| CTATTTGCAAAGCAAAGCGC+GGG | - | chr4_3:16350004-16350023 | Msa0632370:CDS | 45.0% | |
| TATTTGCAAAGCAAAGCGCG+GGG | - | chr4_3:16350005-16350024 | Msa0632370:intron | 45.0% | |
| GGCAAGTAGATCATCTGGAA+GGG | + | chr4_3:16350043-16350062 | None:intergenic | 45.0% | |
| AGGCAAGTAGATCATCTGGA+AGG | + | chr4_3:16350044-16350063 | None:intergenic | 45.0% | |
| ACAGAGGCAAGTAGATCATC+TGG | + | chr4_3:16350048-16350067 | None:intergenic | 45.0% | |
| TCTACTTGCCTCTGTTCTCA+AGG | - | chr4_3:16350053-16350072 | Msa0632370:intron | 45.0% | |
| !! | AGCGGGTAATGTGTCATTTG+AGG | - | chr4_3:16350530-16350549 | Msa0632370:intron | 45.0% |
| ATACAGTTGAGAAGCTGCCA+AGG | - | chr4_3:16350572-16350591 | Msa0632370:intron | 45.0% | |
| CTTATTCGTGAGCTCTCTGT+AGG | - | chr4_3:16350719-16350738 | Msa0632370:intron | 45.0% | |
| ACTATGTCGCCTACTTCACT+TGG | + | chr4_3:16350771-16350790 | None:intergenic | 45.0% | |
| GAAGTAGGCGACATAGTTGT+AGG | - | chr4_3:16350774-16350793 | Msa0632370:intron | 45.0% | |
| !!! | GCATTTTATGCTGGTTTCCC+AGG | - | chr4_3:16350846-16350865 | Msa0632370:intron | 45.0% |
| ATCAGCAACTGCTTGAAGTC+CGG | + | chr4_3:16351173-16351192 | None:intergenic | 45.0% | |
| TTTGATGAAGGAATTGGGGC+TGG | - | chr4_3:16351309-16351328 | Msa0632370:CDS | 45.0% | |
| GGTTCGCAAAACTAACCCAA+AGG | - | chr4_3:16351365-16351384 | Msa0632370:intron | 45.0% | |
| CATAGGAAGAAGACAGTCTC+GGG | + | chr4_3:16351936-16351955 | None:intergenic | 45.0% | |
| CCATAGGAAGAAGACAGTCT+CGG | + | chr4_3:16351937-16351956 | None:intergenic | 45.0% | |
| CGAGACTGTCTTCTTCCTAT+GGG | - | chr4_3:16351935-16351954 | Msa0632370:intron | 45.0% | |
| GAGAATGTTGCACAGCGTTA+CGG | - | chr4_3:16351968-16351987 | Msa0632370:intron | 45.0% | |
| ATTTCATGCTTACAGCAGCC+TGG | + | chr4_3:16352015-16352034 | None:intergenic | 45.0% | |
| GAAATTAGGTCGAGTCTCAC+AGG | - | chr4_3:16352100-16352119 | Msa0632370:CDS | 45.0% | |
| TGTGGATCCTAAAACTGGAG+AGG | - | chr4_3:16352262-16352281 | Msa0632370:CDS | 45.0% | |
| AAAGATGGAACCACAACTGC+AGG | - | chr4_3:16352371-16352390 | Msa0632370:intron | 45.0% | |
| TAAACCGAGCACAAGGAACT+TGG | + | chr4_3:16352434-16352453 | None:intergenic | 45.0% | |
| AATGCTAGCCAAGTTAGCGA+TGG | - | chr4_3:16352491-16352510 | Msa0632370:intron | 45.0% | |
| GCTTCTCATGAAGAGAAGTG+TGG | - | chr4_3:16352526-16352545 | Msa0632370:intron | 45.0% | |
| ! | AGAAGTGTGGCTGTGCAAAA+AGG | - | chr4_3:16352539-16352558 | Msa0632370:intron | 45.0% |
| GAAGTGTGGCTGTGCAAAAA+GGG | - | chr4_3:16352540-16352559 | Msa0632370:intron | 45.0% | |
| GCGAATGAAAGTGGTTTCCT+GGG | + | chr4_3:16352952-16352971 | None:intergenic | 45.0% | |
| ! | TGTAGGAGTTTTGCTGCTGT+TGG | - | chr4_3:16353436-16353455 | Msa0632370:CDS | 45.0% |
| ATTGGGGCTTGATCCAACAA+AGG | - | chr4_3:16353688-16353707 | Msa0632370:intron | 45.0% | |
| AATTTACCTGTGGCGCCTAA+AGG | + | chr4_3:16353749-16353768 | None:intergenic | 45.0% | |
| TTAGTGGCTCGAATGGCATT+TGG | + | chr4_3:16353907-16353926 | None:intergenic | 45.0% | |
| CAAAGCGACAATCCTTTCCA+CGG | + | chr4_3:16354116-16354135 | None:intergenic | 45.0% | |
| ! | TTTGAAGCAGACCATGCCTA+AGG | - | chr4_3:16354192-16354211 | Msa0632370:intron | 45.0% |
| AGCTGCGGCAGTATTTGAAA+GGG | - | chr4_3:16354288-16354307 | Msa0632370:five_prime_UTR | 45.0% | |
| !! | ATAATATTATTAATCATATA+CGG | - | chr4_3:16353224-16353243 | Msa0632370:intron | 5.0% |
| TAGCATCCTTAACCAGTGCC+CGG | - | chr4_3:16348988-16349007 | Msa0632370:three_prime_UTR | 50.0% | |
| AAATGTTAACCAGTGCCCCC+GGG | + | chr4_3:16349009-16349028 | None:intergenic | 50.0% | |
| GAAATGTTAACCAGTGCCCC+CGG | + | chr4_3:16349010-16349029 | None:intergenic | 50.0% | |
| CAGGCTTCATTCTGTTCTGC+TGG | - | chr4_3:16349362-16349381 | Msa0632370:CDS | 50.0% | |
| TGTTCTGCTGGACAAACTGG+TGG | - | chr4_3:16349374-16349393 | Msa0632370:intron | 50.0% | |
| !! | GTTTGGTGGTGTCACTGACA+CGG | - | chr4_3:16349771-16349790 | Msa0632370:CDS | 50.0% |
| ATTTGCAAAGCAAAGCGCGG+GGG | - | chr4_3:16350006-16350025 | Msa0632370:intron | 50.0% | |
| !!! | GTAGGCACAGTTTTAGGACC+AGG | - | chr4_3:16350792-16350811 | Msa0632370:intron | 50.0% |
| TGAAGGAATTGGGGCTGGAT+TGG | - | chr4_3:16351314-16351333 | Msa0632370:CDS | 50.0% | |
| CCGAGACTGTCTTCTTCCTA+TGG | - | chr4_3:16351934-16351953 | Msa0632370:intron | 50.0% | |
| GGATCCAAGTTCCTTGTGCT+CGG | - | chr4_3:16352427-16352446 | Msa0632370:intron | 50.0% | |
| GCACATTGCAGGAAACAAGC+AGG | + | chr4_3:16352930-16352949 | None:intergenic | 50.0% | |
| TTGTTTCCTGCAATGTGCCC+AGG | - | chr4_3:16352932-16352951 | Msa0632370:intron | 50.0% | |
| CGCGAATGAAAGTGGTTTCC+TGG | + | chr4_3:16352953-16352972 | None:intergenic | 50.0% | |
| TGGTGTAGATCCTGCTGTCA+TGG | - | chr4_3:16353456-16353475 | Msa0632370:intron | 50.0% | |
| GGTGTAGATCCTGCTGTCAT+GGG | - | chr4_3:16353457-16353476 | Msa0632370:intron | 50.0% | |
| GCAGCTGGAATAGCAAAAGC+TGG | + | chr4_3:16353490-16353509 | None:intergenic | 50.0% | |
| ! | CAATGTCAATGGTGGTGCCA+TGG | - | chr4_3:16353712-16353731 | Msa0632370:intron | 50.0% |
| !!! | AATGGTGGTGCCATGGCTTT+TGG | - | chr4_3:16353719-16353738 | Msa0632370:intron | 50.0% |
| !! | TTGAATGAGATGAAGCGCCG+TGG | - | chr4_3:16354096-16354115 | Msa0632370:intron | 50.0% |
| ! | CGTGGAAAGGATTGTCGCTT+TGG | - | chr4_3:16354114-16354133 | Msa0632370:intron | 50.0% |
| GAGCTGCGGCAGTATTTGAA+AGG | - | chr4_3:16354287-16354306 | Msa0632370:five_prime_UTR | 50.0% | |
| GCTGCGGCAGTATTTGAAAG+GGG | - | chr4_3:16354289-16354308 | Msa0632370:five_prime_UTR | 50.0% | |
| GTCATGTTAACCAGTGCCCC+CGG | - | chr4_3:16348860-16348879 | Msa0632370:three_prime_UTR | 55.0% | |
| TCATGTTAACCAGTGCCCCC+GGG | - | chr4_3:16348861-16348880 | Msa0632370:three_prime_UTR | 55.0% | |
| TGCTTCCTTAACCAGTGCCC+CGG | + | chr4_3:16348882-16348901 | None:intergenic | 55.0% | |
| AGCATCCTTAACCAGTGCCC+GGG | - | chr4_3:16348989-16349008 | Msa0632370:three_prime_UTR | 55.0% | |
| CACAGCGTTACGGTGTGACA+AGG | - | chr4_3:16351978-16351997 | Msa0632370:intron | 55.0% | |
| ACCAGATGCTGTTGCAGCTG+CGG | + | chr4_3:16352130-16352149 | None:intergenic | 55.0% | |
| CTGCTGCACCATCGCTAACT+TGG | + | chr4_3:16352502-16352521 | None:intergenic | 55.0% | |
| TGGTTTCCTGGGCACATTGC+AGG | + | chr4_3:16352941-16352960 | None:intergenic | 55.0% | |
| GATCCTGCTGTCATGGGTGT+TGG | - | chr4_3:16353463-16353482 | Msa0632370:intron | 55.0% | |
| CCAGCAGATTTCACTGCAGC+TGG | + | chr4_3:16353505-16353524 | None:intergenic | 55.0% | |
| CCAGCTGCAGTGAAATCTGC+TGG | - | chr4_3:16353502-16353521 | Msa0632370:intron | 55.0% | |
| !! | TGAGATGAAGCGCCGTGGAA+AGG | - | chr4_3:16354101-16354120 | Msa0632370:intron | 55.0% |
| ! | AGGTTCTGGTATGGGAGCTG+CGG | - | chr4_3:16354273-16354292 | Msa0632370:exon | 55.0% |
| CATGTTAACCAGTGCCCCCG+GGG | - | chr4_3:16348862-16348881 | Msa0632370:three_prime_UTR | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr4_3:16348879-16348898 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | + | chr4_3:16348880-16348899 | None:intergenic | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | + | chr4_3:16348881-16348900 | None:intergenic | 60.0% | |
| GCATCCTTAACCAGTGCCCG+GGG | - | chr4_3:16348990-16349009 | Msa0632370:three_prime_UTR | 60.0% | |
| CATCCTTAACCAGTGCCCGG+GGG | - | chr4_3:16348991-16349010 | Msa0632370:three_prime_UTR | 60.0% | |
| AGCAAAGCGCGGGGGATTCA+AGG | - | chr4_3:16350014-16350033 | Msa0632370:intron | 60.0% | |
| GCGTTACGGTGTGACAAGGC+AGG | - | chr4_3:16351982-16352001 | Msa0632370:intron | 60.0% | |
| GACAAGGCAGGAGCAAGACC+AGG | - | chr4_3:16351994-16352013 | Msa0632370:intron | 60.0% | |
| GGACCAACACCCATGACAGC+AGG | + | chr4_3:16353469-16353488 | None:intergenic | 60.0% | |
| GGACATCCTTTAGGCGCCAC+AGG | - | chr4_3:16353740-16353759 | Msa0632370:intron | 60.0% | |
| GCCGCAGCTGCAACAGCATC+TGG | - | chr4_3:16352126-16352145 | Msa0632370:CDS | 65.0% | |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr4_3:16348874-16348893 | Msa0632370:three_prime_UTR | 70.0% |
| !! | GTGCCCCCGGGCACTGGTTA+AGG | + | chr4_3:16348997-16349016 | None:intergenic | 70.0% |
| ! | TAACCAGTGCCCGGGGGCAC+TGG | - | chr4_3:16348997-16349016 | Msa0632370:three_prime_UTR | 70.0% |
| TAACCAGTGCCCCCGGGCAC+TGG | + | chr4_3:16349003-16349022 | None:intergenic | 70.0% | |
| AACCAGTGCCCCCGGGGCAC+TGG | - | chr4_3:16348868-16348887 | Msa0632370:three_prime_UTR | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | + | chr4_3:16348873-16348892 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 16348781 | 16354683 | 16348781 | ID=Msa0632370;Name=Msa0632370 |
| chr4_3 | mRNA | 16348781 | 16354683 | 16348781 | ID=Msa0632370-mRNA-1;Parent=Msa0632370;Name=Msa0632370-mRNA-1;_AED=0.10;_eAED=0.10;_QI=217|1|1|1|0.86|0.75|16|341|435 |
| chr4_3 | exon | 16348781 | 16348813 | 16348781 | ID=Msa0632370-mRNA-1:exon:4630;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16348835 | 16349189 | 16348835 | ID=Msa0632370-mRNA-1:exon:4629;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16349308 | 16349391 | 16349308 | ID=Msa0632370-mRNA-1:exon:4628;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16349703 | 16349811 | 16349703 | ID=Msa0632370-mRNA-1:exon:4627;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16349900 | 16350023 | 16349900 | ID=Msa0632370-mRNA-1:exon:4626;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16350879 | 16350975 | 16350879 | ID=Msa0632370-mRNA-1:exon:4625;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16351072 | 16351204 | 16351072 | ID=Msa0632370-mRNA-1:exon:4624;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16351279 | 16351356 | 16351279 | ID=Msa0632370-mRNA-1:exon:4623;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16351443 | 16351550 | 16351443 | ID=Msa0632370-mRNA-1:exon:4622;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16352078 | 16352145 | 16352078 | ID=Msa0632370-mRNA-1:exon:4621;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16352235 | 16352333 | 16352235 | ID=Msa0632370-mRNA-1:exon:4620;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16352597 | 16352723 | 16352597 | ID=Msa0632370-mRNA-1:exon:4619;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16353390 | 16353474 | 16353390 | ID=Msa0632370-mRNA-1:exon:4618;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16354041 | 16354099 | 16354041 | ID=Msa0632370-mRNA-1:exon:4617;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16354194 | 16354421 | 16354194 | ID=Msa0632370-mRNA-1:exon:4616;Parent=Msa0632370-mRNA-1 |
| chr4_3 | exon | 16354605 | 16354683 | 16354605 | ID=Msa0632370-mRNA-1:exon:4615;Parent=Msa0632370-mRNA-1 |
| chr4_3 | five_prime_UTR | 16354605 | 16354683 | 16354605 | ID=Msa0632370-mRNA-1:five_prime_utr;Parent=Msa0632370-mRNA-1 |
| chr4_3 | five_prime_UTR | 16354284 | 16354421 | 16354284 | ID=Msa0632370-mRNA-1:five_prime_utr;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16354194 | 16354283 | 16354194 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16354041 | 16354099 | 16354041 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16353390 | 16353474 | 16353390 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16352597 | 16352723 | 16352597 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16352235 | 16352333 | 16352235 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16352078 | 16352145 | 16352078 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16351443 | 16351550 | 16351443 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16351279 | 16351356 | 16351279 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16351072 | 16351204 | 16351072 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16350879 | 16350975 | 16350879 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16349900 | 16350023 | 16349900 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16349703 | 16349811 | 16349703 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16349308 | 16349391 | 16349308 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | CDS | 16349143 | 16349189 | 16349143 | ID=Msa0632370-mRNA-1:cds;Parent=Msa0632370-mRNA-1 |
| chr4_3 | three_prime_UTR | 16348835 | 16349142 | 16348835 | ID=Msa0632370-mRNA-1:three_prime_utr;Parent=Msa0632370-mRNA-1 |
| chr4_3 | three_prime_UTR | 16348781 | 16348813 | 16348781 | ID=Msa0632370-mRNA-1:three_prime_utr;Parent=Msa0632370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
