Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1064220 | XP_024627019.1 | 98.529 | 612 | 9 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1249 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1064220 | sp|Q9C9Z7|Y3857_ARATH | 62.645 | 605 | 202 | 11 | 21 | 611 | 22 | 616 | 0.0 | 720 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1064220 | A0A396H025 | 98.529 | 612 | 9 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1249 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0752780 | Msa1064220 | 0.810123 | 1.347603e-50 | -8.615850e-47 |
Msa1064220 | Msa1111840 | 0.815018 | 1.145871e-51 | -8.615850e-47 |
Msa1064220 | Msa1349690 | 0.801184 | 1.014795e-48 | -8.615850e-47 |
Msa1064220 | Msa1393780 | 0.808845 | 2.535327e-50 | -8.615850e-47 |
Msa0517250 | Msa1064220 | 0.810820 | 9.532465e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1064220 | MtrunA17_Chr7g0245201 | 98.529 | 612 | 9 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1249 |
Msa1064220 | MtrunA17_Chr4g0010091 | 51.123 | 579 | 242 | 11 | 25 | 581 | 26 | 585 | 0.0 | 549 |
Msa1064220 | MtrunA17_Chr1g0195911 | 45.108 | 603 | 295 | 9 | 31 | 612 | 34 | 621 | 3.16e-169 | 496 |
Msa1064220 | MtrunA17_Chr7g0268781 | 44.314 | 598 | 288 | 12 | 31 | 597 | 34 | 617 | 5.44e-163 | 480 |
Msa1064220 | MtrunA17_Chr5g0401451 | 41.042 | 614 | 314 | 16 | 29 | 612 | 35 | 630 | 1.40e-141 | 425 |
Msa1064220 | MtrunA17_Chr4g0053841 | 40.066 | 604 | 319 | 15 | 32 | 612 | 12 | 595 | 1.38e-134 | 406 |
Msa1064220 | MtrunA17_Chr2g0303541 | 39.162 | 549 | 297 | 10 | 36 | 555 | 29 | 569 | 1.20e-120 | 372 |
Msa1064220 | MtrunA17_Chr3g0108331 | 36.088 | 593 | 320 | 11 | 32 | 612 | 23 | 568 | 4.01e-115 | 355 |
Msa1064220 | MtrunA17_Chr8g0374011 | 33.968 | 683 | 344 | 17 | 7 | 609 | 1 | 656 | 7.64e-113 | 352 |
Msa1064220 | MtrunA17_Chr2g0285511 | 38.051 | 544 | 291 | 12 | 33 | 549 | 26 | 550 | 8.02e-113 | 350 |
Msa1064220 | MtrunA17_Chr4g0050021 | 34.835 | 577 | 312 | 10 | 29 | 549 | 40 | 608 | 1.90e-110 | 346 |
Msa1064220 | MtrunA17_Chr2g0320691 | 33.871 | 620 | 355 | 14 | 30 | 600 | 18 | 631 | 5.85e-110 | 343 |
Msa1064220 | MtrunA17_Chr5g0432861 | 34.000 | 600 | 340 | 13 | 29 | 612 | 20 | 579 | 2.78e-106 | 332 |
Msa1064220 | MtrunA17_Chr2g0279481 | 34.323 | 606 | 325 | 16 | 7 | 549 | 19 | 614 | 3.00e-105 | 333 |
Msa1064220 | MtrunA17_Chr1g0181181 | 38.205 | 479 | 261 | 10 | 33 | 495 | 26 | 485 | 2.43e-104 | 327 |
Msa1064220 | MtrunA17_Chr8g0382231 | 35.441 | 522 | 281 | 10 | 2 | 494 | 22 | 516 | 1.57e-98 | 313 |
Msa1064220 | MtrunA17_Chr1g0199631 | 35.560 | 554 | 308 | 15 | 51 | 576 | 8 | 540 | 1.25e-96 | 307 |
Msa1064220 | MtrunA17_Chr1g0150191 | 34.068 | 590 | 334 | 15 | 25 | 587 | 19 | 580 | 1.42e-90 | 292 |
Msa1064220 | MtrunA17_Chr5g0412591 | 37.525 | 501 | 240 | 10 | 29 | 489 | 22 | 489 | 2.68e-90 | 291 |
Msa1064220 | MtrunA17_Chr5g0401341 | 36.722 | 482 | 263 | 13 | 29 | 489 | 23 | 483 | 1.74e-88 | 287 |
Msa1064220 | MtrunA17_Chr8g0367891 | 35.078 | 516 | 282 | 12 | 36 | 525 | 29 | 517 | 1.01e-85 | 279 |
Msa1064220 | MtrunA17_Chr1g0207461 | 33.211 | 545 | 321 | 12 | 23 | 540 | 18 | 546 | 3.60e-85 | 278 |
Msa1064220 | MtrunA17_Chr1g0191711 | 33.190 | 464 | 269 | 10 | 31 | 490 | 56 | 482 | 1.38e-79 | 261 |
Msa1064220 | MtrunA17_Chr4g0076521 | 32.143 | 476 | 298 | 11 | 21 | 487 | 14 | 473 | 2.69e-73 | 246 |
Msa1064220 | MtrunA17_Chr2g0290741 | 31.818 | 484 | 290 | 12 | 16 | 487 | 8 | 463 | 2.09e-66 | 227 |
Msa1064220 | MtrunA17_Chr4g0003891 | 33.985 | 409 | 230 | 9 | 203 | 601 | 44 | 422 | 1.42e-60 | 208 |
Msa1064220 | MtrunA17_Chr2g0332281 | 37.105 | 380 | 213 | 9 | 208 | 580 | 24 | 384 | 4.13e-59 | 203 |
Msa1064220 | MtrunA17_Chr4g0023801 | 29.371 | 572 | 334 | 21 | 36 | 573 | 7 | 542 | 1.96e-53 | 191 |
Msa1064220 | MtrunA17_Chr1g0206621 | 45.588 | 136 | 71 | 3 | 43 | 176 | 77 | 211 | 8.92e-32 | 123 |
Msa1064220 | MtrunA17_Chr1g0163311 | 28.212 | 358 | 200 | 10 | 206 | 554 | 208 | 517 | 2.41e-31 | 128 |
Msa1064220 | MtrunA17_Chr1g0163311 | 34.783 | 115 | 69 | 2 | 42 | 155 | 13 | 122 | 6.83e-12 | 68.2 |
Msa1064220 | MtrunA17_Chr4g0037661 | 28.490 | 351 | 210 | 8 | 206 | 551 | 208 | 522 | 1.01e-30 | 126 |
Msa1064220 | MtrunA17_Chr4g0037661 | 31.746 | 126 | 82 | 3 | 36 | 157 | 6 | 131 | 7.15e-12 | 68.2 |
Msa1064220 | MtrunA17_Chr2g0280541 | 28.212 | 397 | 223 | 10 | 101 | 475 | 2 | 358 | 6.76e-28 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1064220 | AT3G08570.1 | 62.645 | 605 | 202 | 11 | 21 | 611 | 22 | 616 | 0.0 | 720 |
Msa1064220 | AT3G08660.1 | 60.438 | 594 | 190 | 13 | 24 | 608 | 25 | 582 | 0.0 | 672 |
Msa1064220 | AT3G08660.3 | 59.140 | 558 | 183 | 13 | 60 | 608 | 1 | 522 | 0.0 | 610 |
Msa1064220 | AT5G48800.1 | 48.731 | 591 | 262 | 10 | 29 | 602 | 37 | 603 | 0.0 | 531 |
Msa1064220 | AT1G03010.2 | 45.098 | 612 | 295 | 12 | 31 | 612 | 7 | 607 | 1.23e-164 | 484 |
Msa1064220 | AT1G03010.3 | 45.041 | 615 | 297 | 12 | 28 | 612 | 30 | 633 | 2.24e-164 | 484 |
Msa1064220 | AT1G03010.1 | 45.098 | 612 | 295 | 12 | 31 | 612 | 34 | 634 | 5.16e-164 | 483 |
Msa1064220 | AT3G08660.2 | 56.977 | 430 | 147 | 9 | 24 | 446 | 25 | 423 | 1.07e-158 | 462 |
Msa1064220 | AT2G47860.1 | 42.444 | 622 | 312 | 10 | 13 | 609 | 24 | 624 | 1.27e-153 | 456 |
Msa1064220 | AT2G47860.3 | 41.308 | 627 | 306 | 10 | 31 | 609 | 35 | 647 | 4.24e-148 | 443 |
Msa1064220 | AT5G67385.1 | 40.630 | 603 | 314 | 13 | 32 | 612 | 24 | 604 | 1.78e-136 | 411 |
Msa1064220 | AT5G67385.4 | 40.381 | 577 | 300 | 13 | 58 | 612 | 5 | 559 | 3.55e-127 | 386 |
Msa1064220 | AT5G67385.5 | 40.381 | 577 | 300 | 13 | 58 | 612 | 5 | 559 | 3.55e-127 | 386 |
Msa1064220 | AT5G67385.2 | 40.381 | 577 | 300 | 13 | 58 | 612 | 5 | 559 | 3.55e-127 | 386 |
Msa1064220 | AT5G67385.3 | 40.381 | 577 | 300 | 13 | 58 | 612 | 5 | 559 | 3.55e-127 | 386 |
Msa1064220 | AT2G47860.5 | 41.473 | 516 | 267 | 8 | 119 | 609 | 1 | 506 | 3.05e-119 | 364 |
Msa1064220 | AT2G47860.2 | 41.473 | 516 | 267 | 8 | 119 | 609 | 1 | 506 | 3.05e-119 | 364 |
Msa1064220 | AT1G30440.1 | 38.408 | 578 | 315 | 13 | 36 | 576 | 29 | 602 | 1.93e-115 | 359 |
Msa1064220 | AT5G03250.1 | 37.658 | 555 | 288 | 14 | 33 | 555 | 26 | 554 | 2.56e-109 | 341 |
Msa1064220 | AT2G30520.1 | 34.848 | 594 | 345 | 12 | 32 | 612 | 29 | 593 | 3.71e-108 | 338 |
Msa1064220 | AT5G13600.1 | 37.011 | 562 | 302 | 13 | 36 | 571 | 29 | 564 | 4.74e-108 | 337 |
Msa1064220 | AT5G66560.1 | 36.349 | 619 | 289 | 13 | 33 | 560 | 19 | 623 | 2.53e-107 | 338 |
Msa1064220 | AT3G50840.1 | 37.333 | 600 | 317 | 16 | 25 | 609 | 12 | 567 | 6.26e-106 | 331 |
Msa1064220 | AT5G66560.3 | 36.244 | 607 | 282 | 13 | 45 | 560 | 2 | 594 | 6.84e-105 | 331 |
Msa1064220 | AT3G49970.1 | 35.149 | 569 | 288 | 15 | 45 | 595 | 6 | 511 | 7.24e-104 | 324 |
Msa1064220 | AT3G49970.2 | 35.149 | 569 | 288 | 15 | 45 | 595 | 6 | 511 | 7.24e-104 | 324 |
Msa1064220 | AT5G66560.4 | 38.764 | 534 | 265 | 12 | 75 | 560 | 65 | 584 | 2.37e-103 | 327 |
Msa1064220 | AT2G30520.2 | 34.729 | 573 | 332 | 12 | 53 | 612 | 2 | 545 | 2.08e-102 | 321 |
Msa1064220 | AT2G30520.3 | 34.729 | 573 | 332 | 12 | 53 | 612 | 2 | 545 | 2.08e-102 | 321 |
Msa1064220 | AT3G44820.1 | 32.918 | 562 | 337 | 9 | 33 | 557 | 23 | 581 | 4.92e-102 | 323 |
Msa1064220 | AT2G47860.4 | 42.630 | 441 | 217 | 8 | 13 | 438 | 24 | 443 | 7.73e-102 | 317 |
Msa1064220 | AT3G50840.2 | 36.796 | 568 | 304 | 15 | 57 | 609 | 4 | 531 | 1.44e-97 | 308 |
Msa1064220 | AT3G50840.3 | 36.796 | 568 | 304 | 15 | 57 | 609 | 4 | 531 | 1.44e-97 | 308 |
Msa1064220 | AT2G47860.6 | 41.031 | 446 | 211 | 8 | 31 | 438 | 35 | 466 | 1.21e-96 | 304 |
Msa1064220 | AT2G14820.2 | 34.991 | 543 | 303 | 14 | 32 | 542 | 26 | 550 | 1.38e-91 | 296 |
Msa1064220 | AT2G14820.1 | 34.991 | 543 | 303 | 14 | 32 | 542 | 26 | 550 | 1.38e-91 | 296 |
Msa1064220 | AT1G67900.5 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT1G67900.1 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT1G67900.3 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT1G67900.6 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT1G67900.2 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT1G67900.4 | 33.505 | 582 | 318 | 14 | 29 | 553 | 22 | 591 | 1.13e-84 | 277 |
Msa1064220 | AT4G31820.1 | 33.586 | 527 | 284 | 14 | 31 | 538 | 25 | 504 | 3.54e-83 | 272 |
Msa1064220 | AT5G10250.2 | 31.760 | 551 | 311 | 12 | 31 | 549 | 48 | 565 | 2.99e-80 | 265 |
Msa1064220 | AT5G67440.3 | 34.091 | 484 | 290 | 13 | 29 | 499 | 23 | 490 | 1.65e-79 | 262 |
Msa1064220 | AT5G67440.1 | 34.091 | 484 | 290 | 13 | 29 | 499 | 23 | 490 | 1.65e-79 | 262 |
Msa1064220 | AT5G03250.2 | 35.332 | 467 | 247 | 12 | 119 | 555 | 1 | 442 | 7.78e-79 | 258 |
Msa1064220 | AT2G23050.1 | 32.755 | 461 | 261 | 10 | 46 | 498 | 40 | 459 | 9.46e-79 | 258 |
Msa1064220 | AT5G10250.1 | 31.852 | 540 | 310 | 12 | 31 | 549 | 48 | 550 | 3.77e-76 | 254 |
Msa1064220 | AT5G66560.2 | 35.070 | 499 | 234 | 11 | 9 | 438 | 2 | 479 | 1.46e-75 | 249 |
Msa1064220 | AT4G37590.1 | 32.041 | 490 | 279 | 12 | 29 | 500 | 23 | 476 | 7.30e-75 | 250 |
Msa1064220 | AT5G67440.2 | 34.194 | 465 | 277 | 13 | 48 | 499 | 5 | 453 | 1.08e-74 | 249 |
Msa1064220 | AT3G26490.1 | 32.406 | 503 | 281 | 10 | 29 | 489 | 22 | 507 | 2.76e-74 | 249 |
Msa1064220 | AT3G26490.3 | 32.406 | 503 | 281 | 10 | 29 | 489 | 22 | 507 | 2.76e-74 | 249 |
Msa1064220 | AT3G26490.4 | 32.406 | 503 | 281 | 10 | 29 | 489 | 22 | 507 | 2.76e-74 | 249 |
Msa1064220 | AT4G31820.2 | 34.354 | 457 | 247 | 13 | 60 | 497 | 1 | 423 | 7.28e-74 | 246 |
Msa1064220 | AT5G47800.3 | 29.769 | 477 | 311 | 9 | 29 | 499 | 22 | 480 | 3.33e-65 | 224 |
Msa1064220 | AT5G47800.1 | 29.769 | 477 | 311 | 9 | 29 | 499 | 22 | 480 | 3.33e-65 | 224 |
Msa1064220 | AT5G47800.4 | 29.769 | 477 | 311 | 9 | 29 | 499 | 22 | 480 | 3.33e-65 | 224 |
Msa1064220 | AT5G47800.2 | 29.769 | 477 | 311 | 9 | 29 | 499 | 135 | 593 | 3.43e-64 | 224 |
Msa1064220 | AT1G52770.1 | 37.157 | 401 | 217 | 9 | 201 | 586 | 23 | 403 | 5.17e-64 | 218 |
Msa1064220 | AT3G26490.2 | 30.464 | 453 | 256 | 10 | 29 | 439 | 22 | 457 | 3.57e-55 | 195 |
Msa1064220 | AT5G64330.1 | 34.857 | 350 | 187 | 8 | 272 | 584 | 371 | 716 | 6.40e-54 | 196 |
Msa1064220 | AT5G64330.1 | 34.420 | 276 | 150 | 5 | 7 | 254 | 26 | 298 | 2.47e-39 | 154 |
Msa1064220 | AT2G23050.2 | 30.990 | 384 | 220 | 9 | 119 | 498 | 1 | 343 | 7.62e-54 | 188 |
Msa1064220 | AT3G15570.1 | 36.667 | 300 | 162 | 6 | 208 | 494 | 29 | 313 | 2.21e-52 | 186 |
Msa1064220 | AT5G64330.3 | 41.700 | 247 | 121 | 4 | 272 | 498 | 312 | 555 | 1.44e-51 | 187 |
Msa1064220 | AT5G64330.3 | 35.246 | 244 | 123 | 6 | 41 | 254 | 1 | 239 | 4.78e-35 | 140 |
Msa1064220 | AT5G64330.2 | 41.700 | 247 | 121 | 4 | 272 | 498 | 371 | 614 | 3.42e-51 | 187 |
Msa1064220 | AT5G64330.2 | 34.420 | 276 | 150 | 5 | 7 | 254 | 26 | 298 | 1.36e-39 | 154 |
Msa1064220 | AT5G48130.1 | 28.484 | 488 | 279 | 12 | 33 | 498 | 39 | 478 | 2.13e-50 | 185 |
Msa1064220 | AT3G19850.1 | 28.513 | 491 | 281 | 13 | 36 | 488 | 6 | 464 | 1.32e-49 | 181 |
Msa1064220 | AT3G22104.1 | 28.571 | 462 | 263 | 13 | 34 | 474 | 5 | 420 | 7.12e-45 | 167 |
Msa1064220 | AT3G03510.1 | 27.184 | 412 | 244 | 9 | 88 | 495 | 8 | 367 | 1.86e-43 | 162 |
Msa1064220 | AT1G50280.1 | 27.557 | 479 | 294 | 13 | 35 | 483 | 5 | 460 | 2.26e-41 | 157 |
Msa1064220 | AT1G50280.2 | 27.752 | 436 | 267 | 11 | 73 | 483 | 15 | 427 | 2.29e-38 | 148 |
Msa1064220 | AT3G22104.4 | 29.124 | 388 | 210 | 11 | 106 | 474 | 4 | 345 | 4.99e-34 | 135 |
Msa1064220 | AT3G22104.2 | 29.124 | 388 | 210 | 11 | 106 | 474 | 4 | 345 | 4.99e-34 | 135 |
Msa1064220 | AT3G22104.3 | 29.124 | 388 | 210 | 11 | 106 | 474 | 4 | 345 | 4.99e-34 | 135 |
Msa1064220 | AT5G17580.2 | 25.996 | 477 | 310 | 12 | 31 | 495 | 18 | 463 | 6.27e-34 | 136 |
Msa1064220 | AT5G17580.1 | 25.996 | 477 | 310 | 12 | 31 | 495 | 3 | 448 | 1.30e-33 | 135 |
Msa1064220 | AT3G49900.1 | 28.512 | 242 | 136 | 10 | 389 | 599 | 198 | 433 | 1.48e-12 | 70.9 |
Msa1064220 | AT3G49900.2 | 28.163 | 245 | 136 | 11 | 389 | 599 | 198 | 436 | 6.22e-11 | 65.5 |
Find 200 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTTTACCTCACTTTCTA+AGG | 0.191424 | 7_2:+56730855 | Msa1064220:CDS |
CAAATGTTTCTCTTCATCTT+TGG | 0.209542 | 7_2:+56731086 | Msa1064220:three_prime_UTR |
GGTATTCTTCTGTCATTTCT+AGG | 0.221446 | 7_2:-56729329 | None:intergenic |
CTCCTCCTCCTCCTTGTGTC+TGG | 0.230774 | 7_2:-56728205 | None:intergenic |
CAATCATCCGTACACATTAT+TGG | 0.231204 | 7_2:+56728099 | Msa1064220:five_prime_UTR |
TGCAAAGAGCAATTAGTTTC+TGG | 0.240250 | 7_2:+56729519 | Msa1064220:CDS |
AAAGTTGTGTATATCATATA+TGG | 0.243635 | 7_2:+56728003 | Msa1064220:five_prime_UTR |
GTGTAAGAGTTGCAAAATTT+AGG | 0.283416 | 7_2:-56728352 | None:intergenic |
CTGGTGTCCTCCTGGAAAAT+TGG | 0.284753 | 7_2:-56729217 | None:intergenic |
CTTGTTCTGTTAATGCTGTA+TGG | 0.294581 | 7_2:-56730474 | None:intergenic |
ATCTCCTCCACTATATTTAG+AGG | 0.297450 | 7_2:-56729453 | None:intergenic |
ATTTGTCAAACTTGCTCCTT+AGG | 0.330918 | 7_2:+56731323 | Msa1064220:three_prime_UTR |
TTGAAAGAAGGATATCATTA+AGG | 0.332998 | 7_2:+56729937 | Msa1064220:CDS |
ACACTGTGATGGTGAATCTA+AGG | 0.338620 | 7_2:+56729554 | Msa1064220:CDS |
ATTCCCCTGACTTTCTTGTT+TGG | 0.339874 | 7_2:+56729861 | Msa1064220:CDS |
ATGATTGATAAAGCAGAAAA+TGG | 0.344798 | 7_2:+56730826 | Msa1064220:CDS |
AATGCCGTGTCGGGGAGTTC+AGG | 0.363949 | 7_2:+56730631 | Msa1064220:CDS |
CTGGAATCGTCTTAGATTGC+GGG | 0.366683 | 7_2:-56731155 | None:intergenic |
TATTGCTGTATGGGAAGTTA+AGG | 0.371809 | 7_2:-56731414 | None:intergenic |
TCCTCCTCCTCCTTGTGTCT+GGG | 0.379376 | 7_2:-56728204 | None:intergenic |
TGGCTTCAGCAACCATCTTC+CGG | 0.381051 | 7_2:-56729161 | None:intergenic |
TCCGATGGGATTGGTTCTAA+TGG | 0.384085 | 7_2:+56730104 | Msa1064220:CDS |
GATATCATTAAGGTTGGAAA+TGG | 0.388010 | 7_2:+56729947 | Msa1064220:CDS |
GTATTGGAAAGTGTCAATTA+TGG | 0.394063 | 7_2:+56729733 | Msa1064220:CDS |
AATTGATTGCTATGTGTTAA+GGG | 0.394683 | 7_2:+56728038 | Msa1064220:five_prime_UTR |
CTTGTTTGGCATGTTAAAGA+TGG | 0.398461 | 7_2:+56729875 | Msa1064220:CDS |
AGCCGTCGACATTTATTTGA+AGG | 0.403248 | 7_2:+56730274 | Msa1064220:CDS |
CTAGGGTTTATATTGCTGTA+TGG | 0.403361 | 7_2:-56731424 | None:intergenic |
TGAAACACTGGAACCCTTGT+TGG | 0.405530 | 7_2:-56729181 | None:intergenic |
TCGCTTCCGCAACTCAAACT+AGG | 0.406624 | 7_2:-56731442 | None:intergenic |
CGCTTCCGCAACTCAAACTA+GGG | 0.408043 | 7_2:-56731441 | None:intergenic |
TTTGCAACTCTTACACTACT+AGG | 0.408962 | 7_2:+56728359 | Msa1064220:CDS |
CAAGTTCAATTGTGAAACTA+AGG | 0.412065 | 7_2:-56731110 | None:intergenic |
TAATTGATTGCTATGTGTTA+AGG | 0.413719 | 7_2:+56728037 | Msa1064220:five_prime_UTR |
CAAACATCACTGAAGGGTAT+TGG | 0.414923 | 7_2:+56729717 | Msa1064220:CDS |
TTAAAGATGGCTATCATGTT+AGG | 0.417004 | 7_2:+56729888 | Msa1064220:CDS |
TCAATGACACGGGCATAATC+AGG | 0.419062 | 7_2:-56730236 | None:intergenic |
TGAAGATAAAACTAGGGAAA+AGG | 0.419246 | 7_2:-56728234 | None:intergenic |
CTTTCAAGCTCAAGCCTACA+TGG | 0.421438 | 7_2:-56729921 | None:intergenic |
GTACGGATGATTGCAGGTTC+AGG | 0.422116 | 7_2:-56728089 | None:intergenic |
TATATGTGCCATGGGAAGAA+TGG | 0.424923 | 7_2:+56729650 | Msa1064220:CDS |
CTTCCGGATCTTCCCACTTA+GGG | 0.425399 | 7_2:-56729145 | None:intergenic |
TCAAATGTCTGGTGTCCTCC+TGG | 0.430176 | 7_2:-56729225 | None:intergenic |
TTGTTCTGTTAATGCTGTAT+GGG | 0.435254 | 7_2:-56730473 | None:intergenic |
CAAGAAAGTCAGGGGAATGA+TGG | 0.436530 | 7_2:-56729856 | None:intergenic |
TGGTGTCCTCCTGGAAAATT+GGG | 0.437510 | 7_2:-56729216 | None:intergenic |
TTCTGTCATTTCTAGGTACT+CGG | 0.438557 | 7_2:-56729322 | None:intergenic |
TCATTGCAAGTTCAAATGTC+TGG | 0.441180 | 7_2:-56729236 | None:intergenic |
AAGAAGGATATCATTAAGGT+TGG | 0.441280 | 7_2:+56729941 | Msa1064220:CDS |
TAATGTGTACGGATGATTGC+AGG | 0.442042 | 7_2:-56728095 | None:intergenic |
GTATAATCATCCATAGCTAT+AGG | 0.444196 | 7_2:+56728128 | Msa1064220:five_prime_UTR |
GGTTCATCTGTAGTTTCCCT+TGG | 0.444366 | 7_2:+56729119 | Msa1064220:intron |
ACATGCCAAACAAGAAAGTC+AGG | 0.444410 | 7_2:-56729866 | None:intergenic |
TGTAGACTTAAGCAAGGATC+AGG | 0.445041 | 7_2:-56730185 | None:intergenic |
ATATGTGCCATGGGAAGAAT+GGG | 0.445842 | 7_2:+56729651 | Msa1064220:CDS |
GGGTTCCAGTGTTTCAAACT+TGG | 0.447494 | 7_2:+56729188 | Msa1064220:CDS |
CTTGCAATGAAGTTCTGTTA+TGG | 0.449622 | 7_2:+56729249 | Msa1064220:CDS |
GTTGCAAAATTTAGGAGTAG+TGG | 0.451556 | 7_2:-56728344 | None:intergenic |
TGGTGAATCTAAGGAAATAA+AGG | 0.452867 | 7_2:+56729563 | Msa1064220:CDS |
AGCTGGAGATTTCAAGATTG+AGG | 0.454447 | 7_2:+56730755 | Msa1064220:CDS |
GCAGTGTCTCTGTATGCATC+TGG | 0.456080 | 7_2:-56731174 | None:intergenic |
CGAGTGCAGCCATGTCTCCT+AGG | 0.456610 | 7_2:+56730692 | Msa1064220:CDS |
CAGACACAAGGAGGAGGAGG+AGG | 0.457260 | 7_2:+56728206 | Msa1064220:five_prime_UTR |
CTCGGCTGCACAACGTAGTC+GGG | 0.459928 | 7_2:-56729304 | None:intergenic |
GACATTACAATTGTCGTTGA+TGG | 0.462071 | 7_2:+56728743 | Msa1064220:CDS |
GGAGTCATTTCTGTTACATA+AGG | 0.462499 | 7_2:+56728766 | Msa1064220:CDS |
GTCAATTATGGAATCAATCA+AGG | 0.462880 | 7_2:+56729745 | Msa1064220:CDS |
TGGTTTCCACAGTTGTCCTC+TGG | 0.466948 | 7_2:-56729800 | None:intergenic |
ACATTACAATTGTCGTTGAT+GGG | 0.475676 | 7_2:+56728744 | Msa1064220:CDS |
TCTTCCGGATCTTCCCACTT+AGG | 0.479881 | 7_2:-56729146 | None:intergenic |
AAAAGCAAGTAGGAAGTCTC+GGG | 0.484110 | 7_2:+56730927 | Msa1064220:CDS |
TTTCCCTTGGTTACCCTAAG+TGG | 0.486130 | 7_2:+56729132 | Msa1064220:CDS |
CCATGGCACATATAACTCTC+TGG | 0.487049 | 7_2:-56729641 | None:intergenic |
AAGTCCAACTGCTATAGAAA+AGG | 0.487096 | 7_2:+56729776 | Msa1064220:CDS |
GAAAGAGTGAAGATAAAACT+AGG | 0.489712 | 7_2:-56728241 | None:intergenic |
TTACCCTAAGTGGGAAGATC+CGG | 0.489913 | 7_2:+56729142 | Msa1064220:CDS |
TAGGGTTTATATTGCTGTAT+GGG | 0.491738 | 7_2:-56731423 | None:intergenic |
TTGTTGCAGTGGCTACCAAC+AGG | 0.491935 | 7_2:+56731197 | Msa1064220:three_prime_UTR |
GCTGGAGATTTCAAGATTGA+GGG | 0.494686 | 7_2:+56730756 | Msa1064220:CDS |
TTTCCTTTCCTAGCAACCTA+AGG | 0.495523 | 7_2:-56731339 | None:intergenic |
ACTCTTTCTAACGGATAGAA+AGG | 0.496332 | 7_2:+56728256 | Msa1064220:five_prime_UTR |
GTTGTGATGGTCACCTGAAA+AGG | 0.496547 | 7_2:-56731047 | None:intergenic |
TAGAAATGACAGAAGAATAC+CGG | 0.497733 | 7_2:+56729331 | Msa1064220:CDS |
ACACCTCCATTCCTTTCTGT+TGG | 0.498389 | 7_2:+56731278 | Msa1064220:three_prime_UTR |
GGATATGAATCCGATGGGAT+TGG | 0.499189 | 7_2:+56730095 | Msa1064220:CDS |
AGCGCAACTGCTCAAAATAC+AGG | 0.499703 | 7_2:-56730603 | None:intergenic |
AGAGAATCGAGAACTGAAGC+TGG | 0.499912 | 7_2:+56730738 | Msa1064220:CDS |
GTGTCGGGGAGTTCAGGAGA+TGG | 0.504014 | 7_2:+56730637 | Msa1064220:CDS |
ACCATGCTGCACAGAATGAC+AGG | 0.507865 | 7_2:+56730554 | Msa1064220:CDS |
ACTCGGCTGCACAACGTAGT+CGG | 0.508972 | 7_2:-56729305 | None:intergenic |
AGGAAGTCTCGGGGAACAGA+GGG | 0.512020 | 7_2:+56730937 | Msa1064220:CDS |
AAAGAGTGAAGATAAAACTA+GGG | 0.515562 | 7_2:-56728240 | None:intergenic |
AGATTTCAAGATTGAGGGTG+AGG | 0.515783 | 7_2:+56730761 | Msa1064220:CDS |
TTCTTTACCTCACTTTCTAA+GGG | 0.516432 | 7_2:+56730856 | Msa1064220:CDS |
TGTCGGGGAGTTCAGGAGAT+GGG | 0.520284 | 7_2:+56730638 | Msa1064220:CDS |
AAGTTGTGTATATCATATAT+GGG | 0.523753 | 7_2:+56728004 | Msa1064220:five_prime_UTR |
GAGGAGATAGAAATCACAAA+AGG | 0.526489 | 7_2:+56729468 | Msa1064220:CDS |
GCTCCTTAGGTTGCTAGGAA+AGG | 0.526916 | 7_2:+56731336 | Msa1064220:three_prime_UTR |
GAGGAAGAAGCGGAAGACTA+CGG | 0.527391 | 7_2:+56730074 | Msa1064220:CDS |
GAGGGTGAGGCTGAGTGAGT+TGG | 0.529782 | 7_2:+56730774 | Msa1064220:CDS |
TTTATCTTCACTCTTTCTAA+CGG | 0.533847 | 7_2:+56728247 | Msa1064220:five_prime_UTR |
AACTTGCTCCTTAGGTTGCT+AGG | 0.536109 | 7_2:+56731331 | Msa1064220:three_prime_UTR |
GAGTCCCCACTCTGCAGAGA+TGG | 0.540669 | 7_2:-56729993 | None:intergenic |
CCAGAGAGTTATATGTGCCA+TGG | 0.541278 | 7_2:+56729641 | Msa1064220:CDS |
GCCCAGACACAAGGAGGAGG+AGG | 0.541293 | 7_2:+56728203 | Msa1064220:five_prime_UTR |
TAGGAGATATTCTCTCTCAT+AGG | 0.541681 | 7_2:+56730975 | Msa1064220:CDS |
GGTGTTATGCCTCTGCGACT+AGG | 0.541721 | 7_2:-56731260 | None:intergenic |
GCAGACACAGCCCAGACACA+AGG | 0.548411 | 7_2:+56728194 | Msa1064220:five_prime_UTR |
GAGGCTGAGTGAGTTGGAGA+AGG | 0.553823 | 7_2:+56730780 | Msa1064220:CDS |
TTCCCTTGGTTACCCTAAGT+GGG | 0.556169 | 7_2:+56729133 | Msa1064220:CDS |
ACCTCACTTTCTAAGGGGAT+AGG | 0.556654 | 7_2:+56730862 | Msa1064220:CDS |
AAATATCTGTTCTTGAGATG+AGG | 0.557190 | 7_2:-56729362 | None:intergenic |
AGAGACACTGCTTGTTGCAG+TGG | 0.557772 | 7_2:+56731186 | Msa1064220:three_prime_UTR |
TTGACGTGGACACAGTTCAC+AGG | 0.557971 | 7_2:+56730021 | Msa1064220:CDS |
CTATCATCCAATAATGTGTA+CGG | 0.558475 | 7_2:-56728106 | None:intergenic |
CATGGTTCTCTGCTAAAAGT+AGG | 0.558923 | 7_2:+56730128 | Msa1064220:CDS |
TCCTATCCCCTTAGAAAGTG+AGG | 0.559258 | 7_2:-56730863 | None:intergenic |
AAGTGGGAAGATCCGGAAGA+TGG | 0.559265 | 7_2:+56729149 | Msa1064220:CDS |
AACTGTGTCCACGTCAAACA+AGG | 0.559313 | 7_2:-56730015 | None:intergenic |
TCTTTAATGATGCTTCCTGT+TGG | 0.559899 | 7_2:-56731212 | None:intergenic |
TTATGCTCAAACATCACTGA+AGG | 0.563509 | 7_2:+56729710 | Msa1064220:CDS |
AAGCTCCAAGTTTGAAACAC+TGG | 0.565146 | 7_2:-56729193 | None:intergenic |
AAGCTCAAGCCTACATGGAA+TGG | 0.565173 | 7_2:-56729916 | None:intergenic |
ACATTACAAGATGTGGAGAA+TGG | 0.566872 | 7_2:+56731237 | Msa1064220:three_prime_UTR |
CAGAGAGTTATATGTGCCAT+GGG | 0.567364 | 7_2:+56729642 | Msa1064220:CDS |
CAAACTGTAGCCTATAGCTA+TGG | 0.568755 | 7_2:-56728138 | None:intergenic |
CTAGGAGACATGGCTGCACT+CGG | 0.571055 | 7_2:-56730691 | None:intergenic |
AAAGACTACATTACAAGATG+TGG | 0.571710 | 7_2:+56731230 | Msa1064220:three_prime_UTR |
TTATACCATCTCTGCAGAGT+GGG | 0.572630 | 7_2:+56729988 | Msa1064220:CDS |
TGACAGGCTTCCACTGCAGA+TGG | 0.573993 | 7_2:+56730570 | Msa1064220:CDS |
TGAAAAGGTAGAAATAATAG+CGG | 0.575889 | 7_2:-56731032 | None:intergenic |
TACTAGAGAATTTCTTGCAG+CGG | 0.576816 | 7_2:+56730045 | Msa1064220:CDS |
GATGGTTGCTGAAGCCAACA+AGG | 0.578445 | 7_2:+56729167 | Msa1064220:CDS |
TAGGTGCCACCATTCCATGT+AGG | 0.580216 | 7_2:+56729907 | Msa1064220:CDS |
TAGGAAGTCTCGGGGAACAG+AGG | 0.580832 | 7_2:+56730936 | Msa1064220:CDS |
TTGTCTTTCAAAATCTTCAG+AGG | 0.582903 | 7_2:+56729397 | Msa1064220:CDS |
AGTGATGCGTAGTTGTCCCT+AGG | 0.583178 | 7_2:-56730709 | None:intergenic |
GCGGATTGAAGAGGAAGAAG+CGG | 0.584077 | 7_2:+56730064 | Msa1064220:CDS |
GGAAATAAAGGATGAGTGTG+TGG | 0.585535 | 7_2:+56729575 | Msa1064220:CDS |
GCCTGTCATTCTGTGCAGCA+TGG | 0.587678 | 7_2:-56730555 | None:intergenic |
AGAAATCACAAAAGGATCTG+TGG | 0.587984 | 7_2:+56729476 | Msa1064220:CDS |
GACTACGGATATGAATCCGA+TGG | 0.588057 | 7_2:+56730089 | Msa1064220:CDS |
GTAGGCTTGAGCTTGAAAGA+AGG | 0.589390 | 7_2:+56729925 | Msa1064220:CDS |
ACAGCCCAGACACAAGGAGG+AGG | 0.592207 | 7_2:+56728200 | Msa1064220:five_prime_UTR |
CATTACAATTGTCGTTGATG+GGG | 0.593770 | 7_2:+56728745 | Msa1064220:CDS |
TACCTTCAAATAAATGTCGA+CGG | 0.594449 | 7_2:-56730276 | None:intergenic |
ATTTAGAGGTAACATCTCAC+AGG | 0.601764 | 7_2:-56729439 | None:intergenic |
ATAAACCCTAGTTTGAGTTG+CGG | 0.602173 | 7_2:+56731436 | Msa1064220:three_prime_UTR |
GAAAAGGTAGAAATAATAGC+GGG | 0.603402 | 7_2:-56731031 | None:intergenic |
GAGTGCAGCCATGTCTCCTA+GGG | 0.603694 | 7_2:+56730693 | Msa1064220:CDS |
TGTTGGCATTAGGTTGACAA+TGG | 0.604688 | 7_2:-56729820 | None:intergenic |
CTTATACCATCTCTGCAGAG+TGG | 0.604785 | 7_2:+56729987 | Msa1064220:CDS |
AGGACGCCAACAGAAAGGAA+TGG | 0.605999 | 7_2:-56731284 | None:intergenic |
GGGATTGGTTCTAATGGACA+TGG | 0.606623 | 7_2:+56730110 | Msa1064220:CDS |
TTATCTAAATTACACTGTGA+TGG | 0.607505 | 7_2:+56729543 | Msa1064220:CDS |
TATGCCCGTGTCATTGATGA+TGG | 0.608528 | 7_2:+56730242 | Msa1064220:CDS |
GATGTTACCTCTAAATATAG+TGG | 0.608574 | 7_2:+56729446 | Msa1064220:CDS |
GTAGTTGTCCCTAGGAGACA+TGG | 0.609118 | 7_2:-56730701 | None:intergenic |
ATCACAACGTGTAAATGAGT+TGG | 0.612187 | 7_2:+56731062 | Msa1064220:three_prime_UTR |
TCAAAATCTTCAGAGGTCAG+TGG | 0.615237 | 7_2:+56729404 | Msa1064220:CDS |
AACTCATTTACACGTTGTGA+TGG | 0.616822 | 7_2:-56731060 | None:intergenic |
ACTACGGATATGAATCCGAT+GGG | 0.617539 | 7_2:+56730090 | Msa1064220:CDS |
CTCAAGCCTACATGGAATGG+TGG | 0.617895 | 7_2:-56729913 | None:intergenic |
TTTCTTGCAGCGGATTGAAG+AGG | 0.618091 | 7_2:+56730055 | Msa1064220:CDS |
AGGATGAGTGTGTGGCATGG+TGG | 0.618147 | 7_2:+56729583 | Msa1064220:CDS |
TCTTTACCTCACTTTCTAAG+GGG | 0.618634 | 7_2:+56730857 | Msa1064220:CDS |
TCCATTAGAACCAATCCCAT+CGG | 0.620313 | 7_2:-56730105 | None:intergenic |
CTTCCCACTTAGGGTAACCA+AGG | 0.621549 | 7_2:-56729136 | None:intergenic |
GTTAAGGAAATTTAAATACA+CGG | 0.622331 | 7_2:-56731398 | None:intergenic |
AATTTCTGTAGACTTAAGCA+AGG | 0.623225 | 7_2:-56730191 | None:intergenic |
TCTGGAATCGTCTTAGATTG+CGG | 0.625898 | 7_2:-56731156 | None:intergenic |
TGGGGACTCCTTGTTTGACG+TGG | 0.632295 | 7_2:+56730007 | Msa1064220:CDS |
ATCTCCTGAACTCCCCGACA+CGG | 0.634657 | 7_2:-56730635 | None:intergenic |
ACTTGTACCACCATCTGCAG+TGG | 0.636178 | 7_2:-56730580 | None:intergenic |
CATGCCAAACAAGAAAGTCA+GGG | 0.638093 | 7_2:-56729865 | None:intergenic |
GAGCAAATGTTCATGAAACA+AGG | 0.641551 | 7_2:+56730802 | Msa1064220:CDS |
TGGAATCGTCTTAGATTGCG+GGG | 0.646784 | 7_2:-56731154 | None:intergenic |
GTTACCTCTAAATATAGTGG+AGG | 0.652145 | 7_2:+56729449 | Msa1064220:CDS |
AGAAATGACAGAAGAATACC+GGG | 0.655554 | 7_2:+56729332 | Msa1064220:CDS |
AAGACCATCATCAATGACAC+GGG | 0.657234 | 7_2:-56730246 | None:intergenic |
TAAAGGATGAGTGTGTGGCA+TGG | 0.657569 | 7_2:+56729580 | Msa1064220:CDS |
CAGGCTTCCACTGCAGATGG+TGG | 0.658123 | 7_2:+56730573 | Msa1064220:CDS |
TATACCATCTCTGCAGAGTG+GGG | 0.658913 | 7_2:+56729989 | Msa1064220:CDS |
AAAGACCATCATCAATGACA+CGG | 0.669381 | 7_2:-56730247 | None:intergenic |
TATGCTCAAACATCACTGAA+GGG | 0.669855 | 7_2:+56729711 | Msa1064220:CDS |
GGAGAATGGCCTAGTCGCAG+AGG | 0.671003 | 7_2:+56731251 | Msa1064220:three_prime_UTR |
TTCCCACTTAGGGTAACCAA+GGG | 0.672159 | 7_2:-56729135 | None:intergenic |
ATGCCAAACAAGAAAGTCAG+GGG | 0.684232 | 7_2:-56729864 | None:intergenic |
ACGCCAACAGAAAGGAATGG+AGG | 0.685625 | 7_2:-56731281 | None:intergenic |
GGAAGTCTCGGGGAACAGAG+GGG | 0.685774 | 7_2:+56730938 | Msa1064220:CDS |
GACACAGCCCAGACACAAGG+AGG | 0.686894 | 7_2:+56728197 | Msa1064220:five_prime_UTR |
ATGTGCCATGGGAAGAATGG+GGG | 0.687594 | 7_2:+56729653 | Msa1064220:CDS |
CTGCTATAGAAAAGGACCAG+AGG | 0.694197 | 7_2:+56729784 | Msa1064220:CDS |
ATTGCGGGGACTATGAAGAG+TGG | 0.700221 | 7_2:-56731140 | None:intergenic |
ATGGTTGCTGAAGCCAACAA+GGG | 0.702263 | 7_2:+56729168 | Msa1064220:CDS |
AAAGCAAGTAGGAAGTCTCG+GGG | 0.706742 | 7_2:+56730928 | Msa1064220:CDS |
AAAGGACCAGAGGACAACTG+TGG | 0.711669 | 7_2:+56729794 | Msa1064220:CDS |
TATGTGCCATGGGAAGAATG+GGG | 0.721508 | 7_2:+56729652 | Msa1064220:CDS |
CTATCACAGAGAATAAGTAG+CGG | 0.734925 | 7_2:+56730664 | Msa1064220:CDS |
GGGACAACTACGCATCACTG+CGG | 0.795492 | 7_2:+56730713 | Msa1064220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAAAAAACAAAACAAATA+TGG | + | chr7_2:56728279-56728298 | Msa1064220:exon | 15.0% |
!!! | CAAGTTTTATATGATAATTT+TGG | + | chr7_2:56728834-56728853 | Msa1064220:intron | 15.0% |
!!! | TATGATAATTTTGGTTATTA+TGG | + | chr7_2:56728843-56728862 | Msa1064220:intron | 15.0% |
!! | AATTCATGTTAACATATTTA+TGG | - | chr7_2:56728913-56728932 | None:intergenic | 15.0% |
!! | TTTCTTTAATATTTCAAAGT+AGG | - | chr7_2:56728954-56728973 | None:intergenic | 15.0% |
!! | AAAGTTGTGTATATCATATA+TGG | + | chr7_2:56728003-56728022 | Msa1064220:five_prime_UTR | 20.0% |
!! | AAGTTGTGTATATCATATAT+GGG | + | chr7_2:56728004-56728023 | Msa1064220:five_prime_UTR | 20.0% |
!! | TTATCTTTATGCTTCTTAAT+TGG | + | chr7_2:56728414-56728433 | Msa1064220:intron | 20.0% |
!! | AATTTAATATGACTAATGCA+AGG | - | chr7_2:56728813-56728832 | None:intergenic | 20.0% |
!!! | AATTTTGGTTATTATGGTTT+TGG | + | chr7_2:56728849-56728868 | Msa1064220:intron | 20.0% |
!! | TAACATATTTATGGATTCAA+AGG | - | chr7_2:56728904-56728923 | None:intergenic | 20.0% |
!!! | AAATACATCATATCATTTTG+AGG | - | chr7_2:56731307-56731326 | None:intergenic | 20.0% |
!! | GTTAAGGAAATTTAAATACA+CGG | - | chr7_2:56731401-56731420 | None:intergenic | 20.0% |
! | TAATTGATTGCTATGTGTTA+AGG | + | chr7_2:56728037-56728056 | Msa1064220:five_prime_UTR | 25.0% |
! | AATTGATTGCTATGTGTTAA+GGG | + | chr7_2:56728038-56728057 | Msa1064220:five_prime_UTR | 25.0% |
! | AAAGAGTGAAGATAAAACTA+GGG | - | chr7_2:56728243-56728262 | None:intergenic | 25.0% |
! | TTTATCTTCACTCTTTCTAA+CGG | + | chr7_2:56728247-56728266 | Msa1064220:five_prime_UTR | 25.0% |
! | GAAGCATAAAGATAAATAAG+AGG | - | chr7_2:56728409-56728428 | None:intergenic | 25.0% |
!!! | CTTATGTGCTTTTTTATAAG+AGG | + | chr7_2:56728534-56728553 | Msa1064220:intron | 25.0% |
!! | AGTTTGTAAATTTGATAGCT+TGG | + | chr7_2:56728593-56728612 | Msa1064220:intron | 25.0% |
!!! | AATCAGTTTTTTCTTCTTCA+TGG | + | chr7_2:56728695-56728714 | Msa1064220:intron | 25.0% |
!!! | GTTTTGGATTTCTATGAATT+GGG | + | chr7_2:56728865-56728884 | Msa1064220:intron | 25.0% |
! | TAATGTGAGTATTCAAAAGA+TGG | - | chr7_2:56728991-56729010 | None:intergenic | 25.0% |
!!! | TAACAGCTAATTTGTTGTAA+TGG | + | chr7_2:56729098-56729117 | Msa1064220:intron | 25.0% |
! | TTATCTAAATTACACTGTGA+TGG | + | chr7_2:56729543-56729562 | Msa1064220:CDS | 25.0% |
! | TTGAAAGAAGGATATCATTA+AGG | + | chr7_2:56729937-56729956 | Msa1064220:CDS | 25.0% |
! | ACAATTAAGTGCCTAAATAT+TGG | - | chr7_2:56730337-56730356 | None:intergenic | 25.0% |
! | ATGATTGATAAAGCAGAAAA+TGG | + | chr7_2:56730826-56730845 | Msa1064220:CDS | 25.0% |
! | TGAAAAGGTAGAAATAATAG+CGG | - | chr7_2:56731035-56731054 | None:intergenic | 25.0% |
! | TATGTGTTAAGGGTCTTTTA+GGG | + | chr7_2:56728048-56728067 | Msa1064220:five_prime_UTR | 30.0% |
CTATCATCCAATAATGTGTA+CGG | - | chr7_2:56728109-56728128 | None:intergenic | 30.0% | |
GTATAATCATCCATAGCTAT+AGG | + | chr7_2:56728128-56728147 | Msa1064220:five_prime_UTR | 30.0% | |
TGAAGATAAAACTAGGGAAA+AGG | - | chr7_2:56728237-56728256 | None:intergenic | 30.0% | |
GAAAGAGTGAAGATAAAACT+AGG | - | chr7_2:56728244-56728263 | None:intergenic | 30.0% | |
GTGTAAGAGTTGCAAAATTT+AGG | - | chr7_2:56728355-56728374 | None:intergenic | 30.0% | |
TACTAGGTACTTCAGTAATA+AGG | + | chr7_2:56728375-56728394 | Msa1064220:intron | 30.0% | |
ACATTACAATTGTCGTTGAT+GGG | + | chr7_2:56728744-56728763 | Msa1064220:CDS | 30.0% | |
AATATGACTAATGCAAGGTT+AGG | - | chr7_2:56728808-56728827 | None:intergenic | 30.0% | |
!!! | GGTTTTGGATTTCTATGAAT+TGG | + | chr7_2:56728864-56728883 | Msa1064220:intron | 30.0% |
TAGAAATGACAGAAGAATAC+CGG | + | chr7_2:56729331-56729350 | Msa1064220:CDS | 30.0% | |
AAATATCTGTTCTTGAGATG+AGG | - | chr7_2:56729365-56729384 | None:intergenic | 30.0% | |
TTGTCTTTCAAAATCTTCAG+AGG | + | chr7_2:56729397-56729416 | Msa1064220:CDS | 30.0% | |
GATGTTACCTCTAAATATAG+TGG | + | chr7_2:56729446-56729465 | Msa1064220:CDS | 30.0% | |
TGGTGAATCTAAGGAAATAA+AGG | + | chr7_2:56729563-56729582 | Msa1064220:CDS | 30.0% | |
!! | GTATTGGAAAGTGTCAATTA+TGG | + | chr7_2:56729733-56729752 | Msa1064220:CDS | 30.0% |
GTCAATTATGGAATCAATCA+AGG | + | chr7_2:56729745-56729764 | Msa1064220:CDS | 30.0% | |
TTAAAGATGGCTATCATGTT+AGG | + | chr7_2:56729888-56729907 | Msa1064220:CDS | 30.0% | |
AAGAAGGATATCATTAAGGT+TGG | + | chr7_2:56729941-56729960 | Msa1064220:CDS | 30.0% | |
GATATCATTAAGGTTGGAAA+TGG | + | chr7_2:56729947-56729966 | Msa1064220:CDS | 30.0% | |
AATTTCTGTAGACTTAAGCA+AGG | - | chr7_2:56730194-56730213 | None:intergenic | 30.0% | |
TACCTTCAAATAAATGTCGA+CGG | - | chr7_2:56730279-56730298 | None:intergenic | 30.0% | |
TTTCCCTGATTCCAATATTT+AGG | + | chr7_2:56730323-56730342 | Msa1064220:intron | 30.0% | |
! | CTTTTGCAAGATTGAGAATA+TGG | - | chr7_2:56730364-56730383 | None:intergenic | 30.0% |
TTGTTCTGTTAATGCTGTAT+GGG | - | chr7_2:56730476-56730495 | None:intergenic | 30.0% | |
TTTCTTTACCTCACTTTCTA+AGG | + | chr7_2:56730855-56730874 | Msa1064220:CDS | 30.0% | |
TTCTTTACCTCACTTTCTAA+GGG | + | chr7_2:56730856-56730875 | Msa1064220:CDS | 30.0% | |
!! | ATTGCAAATTTTAGCAGTCA+AGG | + | chr7_2:56730889-56730908 | Msa1064220:CDS | 30.0% |
GAAAAGGTAGAAATAATAGC+GGG | - | chr7_2:56731034-56731053 | None:intergenic | 30.0% | |
!!! | GCTATTATTTCTACCTTTTC+AGG | + | chr7_2:56731034-56731053 | Msa1064220:three_prime_UTR | 30.0% |
CAAATGTTTCTCTTCATCTT+TGG | + | chr7_2:56731086-56731105 | Msa1064220:three_prime_UTR | 30.0% | |
CAAGTTCAATTGTGAAACTA+AGG | - | chr7_2:56731113-56731132 | None:intergenic | 30.0% | |
AAAGACTACATTACAAGATG+TGG | + | chr7_2:56731230-56731249 | Msa1064220:three_prime_UTR | 30.0% | |
TAGGGTTTATATTGCTGTAT+GGG | - | chr7_2:56731426-56731445 | None:intergenic | 30.0% | |
! | CTATGTGTTAAGGGTCTTTT+AGG | + | chr7_2:56728047-56728066 | Msa1064220:five_prime_UTR | 35.0% |
CAATCATCCGTACACATTAT+TGG | + | chr7_2:56728099-56728118 | Msa1064220:five_prime_UTR | 35.0% | |
! | ACTCTTTCTAACGGATAGAA+AGG | + | chr7_2:56728256-56728275 | Msa1064220:five_prime_UTR | 35.0% |
GTTGCAAAATTTAGGAGTAG+TGG | - | chr7_2:56728347-56728366 | None:intergenic | 35.0% | |
TTTGCAACTCTTACACTACT+AGG | + | chr7_2:56728359-56728378 | Msa1064220:CDS | 35.0% | |
!!! | AGTTTTTTCTTCTTCATGGC+AGG | + | chr7_2:56728699-56728718 | Msa1064220:intron | 35.0% |
GACATTACAATTGTCGTTGA+TGG | + | chr7_2:56728743-56728762 | Msa1064220:CDS | 35.0% | |
CATTACAATTGTCGTTGATG+GGG | + | chr7_2:56728745-56728764 | Msa1064220:CDS | 35.0% | |
GGAGTCATTTCTGTTACATA+AGG | + | chr7_2:56728766-56728785 | Msa1064220:CDS | 35.0% | |
TCAAAGTAGGCATCACTTAT+GGG | - | chr7_2:56728941-56728960 | None:intergenic | 35.0% | |
TTCAAAGTAGGCATCACTTA+TGG | - | chr7_2:56728942-56728961 | None:intergenic | 35.0% | |
CTGATCAACTCAAGACTATT+CGG | + | chr7_2:56729017-56729036 | Msa1064220:intron | 35.0% | |
TCATTGCAAGTTCAAATGTC+TGG | - | chr7_2:56729239-56729258 | None:intergenic | 35.0% | |
CTTGCAATGAAGTTCTGTTA+TGG | + | chr7_2:56729249-56729268 | Msa1064220:CDS | 35.0% | |
! | TTCTGTCATTTCTAGGTACT+CGG | - | chr7_2:56729325-56729344 | None:intergenic | 35.0% |
! | GGTATTCTTCTGTCATTTCT+AGG | - | chr7_2:56729332-56729351 | None:intergenic | 35.0% |
AGAAATGACAGAAGAATACC+GGG | + | chr7_2:56729332-56729351 | Msa1064220:CDS | 35.0% | |
ATTTAGAGGTAACATCTCAC+AGG | - | chr7_2:56729442-56729461 | None:intergenic | 35.0% | |
GTTACCTCTAAATATAGTGG+AGG | + | chr7_2:56729449-56729468 | Msa1064220:CDS | 35.0% | |
ATCTCCTCCACTATATTTAG+AGG | - | chr7_2:56729456-56729475 | None:intergenic | 35.0% | |
GAGGAGATAGAAATCACAAA+AGG | + | chr7_2:56729468-56729487 | Msa1064220:CDS | 35.0% | |
AGAAATCACAAAAGGATCTG+TGG | + | chr7_2:56729476-56729495 | Msa1064220:CDS | 35.0% | |
! | TGCAAAGAGCAATTAGTTTC+TGG | + | chr7_2:56729519-56729538 | Msa1064220:CDS | 35.0% |
TTATGCTCAAACATCACTGA+AGG | + | chr7_2:56729710-56729729 | Msa1064220:CDS | 35.0% | |
TATGCTCAAACATCACTGAA+GGG | + | chr7_2:56729711-56729730 | Msa1064220:CDS | 35.0% | |
AAGTCCAACTGCTATAGAAA+AGG | + | chr7_2:56729776-56729795 | Msa1064220:CDS | 35.0% | |
CTTGTTTGGCATGTTAAAGA+TGG | + | chr7_2:56729875-56729894 | Msa1064220:CDS | 35.0% | |
TACTAGAGAATTTCTTGCAG+CGG | + | chr7_2:56730045-56730064 | Msa1064220:CDS | 35.0% | |
AAAGACCATCATCAATGACA+CGG | - | chr7_2:56730250-56730269 | None:intergenic | 35.0% | |
GTGCCTAAATATTGGAATCA+GGG | - | chr7_2:56730329-56730348 | None:intergenic | 35.0% | |
AGTGCCTAAATATTGGAATC+AGG | - | chr7_2:56730330-56730349 | None:intergenic | 35.0% | |
CTTGTTCTGTTAATGCTGTA+TGG | - | chr7_2:56730477-56730496 | None:intergenic | 35.0% | |
CTATCACAGAGAATAAGTAG+CGG | + | chr7_2:56730664-56730683 | Msa1064220:CDS | 35.0% | |
GAGCAAATGTTCATGAAACA+AGG | + | chr7_2:56730802-56730821 | Msa1064220:CDS | 35.0% | |
TCTTTACCTCACTTTCTAAG+GGG | + | chr7_2:56730857-56730876 | Msa1064220:CDS | 35.0% | |
AAAAAGCAAGTAGGAAGTCT+CGG | + | chr7_2:56730926-56730945 | Msa1064220:CDS | 35.0% | |
TAGGAGATATTCTCTCTCAT+AGG | + | chr7_2:56730975-56730994 | Msa1064220:CDS | 35.0% | |
AACTCATTTACACGTTGTGA+TGG | - | chr7_2:56731063-56731082 | None:intergenic | 35.0% | |
ATCACAACGTGTAAATGAGT+TGG | + | chr7_2:56731062-56731081 | Msa1064220:three_prime_UTR | 35.0% | |
TCTTTAATGATGCTTCCTGT+TGG | - | chr7_2:56731215-56731234 | None:intergenic | 35.0% | |
ACATTACAAGATGTGGAGAA+TGG | + | chr7_2:56731237-56731256 | Msa1064220:three_prime_UTR | 35.0% | |
! | ATTTGTCAAACTTGCTCCTT+AGG | + | chr7_2:56731323-56731342 | Msa1064220:three_prime_UTR | 35.0% |
TATTGCTGTATGGGAAGTTA+AGG | - | chr7_2:56731417-56731436 | None:intergenic | 35.0% | |
CTAGGGTTTATATTGCTGTA+TGG | - | chr7_2:56731427-56731446 | None:intergenic | 35.0% | |
TAATGTGTACGGATGATTGC+AGG | - | chr7_2:56728098-56728117 | None:intergenic | 40.0% | |
CAAACTGTAGCCTATAGCTA+TGG | - | chr7_2:56728141-56728160 | None:intergenic | 40.0% | |
! | CTTGGTTAGCTAGCTTCAAA+AGG | + | chr7_2:56728611-56728630 | Msa1064220:intron | 40.0% |
! | AGGATTTTTGCTGATGTTGC+TGG | + | chr7_2:56728719-56728738 | Msa1064220:intron | 40.0% |
! | AAGCTCCAAGTTTGAAACAC+TGG | - | chr7_2:56729196-56729215 | None:intergenic | 40.0% |
!! | TTGAGATGAGGTTTTGATCC+CGG | - | chr7_2:56729353-56729372 | None:intergenic | 40.0% |
TCAAAATCTTCAGAGGTCAG+TGG | + | chr7_2:56729404-56729423 | Msa1064220:CDS | 40.0% | |
! | ACACTGTGATGGTGAATCTA+AGG | + | chr7_2:56729554-56729573 | Msa1064220:CDS | 40.0% |
GGAAATAAAGGATGAGTGTG+TGG | + | chr7_2:56729575-56729594 | Msa1064220:CDS | 40.0% | |
CAGAGAGTTATATGTGCCAT+GGG | + | chr7_2:56729642-56729661 | Msa1064220:CDS | 40.0% | |
TATATGTGCCATGGGAAGAA+TGG | + | chr7_2:56729650-56729669 | Msa1064220:CDS | 40.0% | |
ATATGTGCCATGGGAAGAAT+GGG | + | chr7_2:56729651-56729670 | Msa1064220:CDS | 40.0% | |
! | CAAACATCACTGAAGGGTAT+TGG | + | chr7_2:56729717-56729736 | Msa1064220:CDS | 40.0% |
! | TGGTCCTTTTCTATAGCAGT+TGG | - | chr7_2:56729783-56729802 | None:intergenic | 40.0% |
!! | TGTTGGCATTAGGTTGACAA+TGG | - | chr7_2:56729823-56729842 | None:intergenic | 40.0% |
! | AGCTTTTGTCTGTTGGCATT+AGG | - | chr7_2:56729833-56729852 | None:intergenic | 40.0% |
! | ATGGAAGAGCTTTTGTCTGT+TGG | - | chr7_2:56729840-56729859 | None:intergenic | 40.0% |
ATTCCCCTGACTTTCTTGTT+TGG | + | chr7_2:56729861-56729880 | Msa1064220:CDS | 40.0% | |
ATGCCAAACAAGAAAGTCAG+GGG | - | chr7_2:56729867-56729886 | None:intergenic | 40.0% | |
CATGCCAAACAAGAAAGTCA+GGG | - | chr7_2:56729868-56729887 | None:intergenic | 40.0% | |
ACATGCCAAACAAGAAAGTC+AGG | - | chr7_2:56729869-56729888 | None:intergenic | 40.0% | |
TTATACCATCTCTGCAGAGT+GGG | + | chr7_2:56729988-56730007 | Msa1064220:CDS | 40.0% | |
ACTACGGATATGAATCCGAT+GGG | + | chr7_2:56730090-56730109 | Msa1064220:CDS | 40.0% | |
TCCATTAGAACCAATCCCAT+CGG | - | chr7_2:56730108-56730127 | None:intergenic | 40.0% | |
CATGGTTCTCTGCTAAAAGT+AGG | + | chr7_2:56730128-56730147 | Msa1064220:CDS | 40.0% | |
TGTAGACTTAAGCAAGGATC+AGG | - | chr7_2:56730188-56730207 | None:intergenic | 40.0% | |
AAGACCATCATCAATGACAC+GGG | - | chr7_2:56730249-56730268 | None:intergenic | 40.0% | |
AGCCGTCGACATTTATTTGA+AGG | + | chr7_2:56730274-56730293 | Msa1064220:CDS | 40.0% | |
GTGCATTGTCAACATGTAGT+GGG | - | chr7_2:56730434-56730453 | None:intergenic | 40.0% | |
AGCTGGAGATTTCAAGATTG+AGG | + | chr7_2:56730755-56730774 | Msa1064220:CDS | 40.0% | |
GCTGGAGATTTCAAGATTGA+GGG | + | chr7_2:56730756-56730775 | Msa1064220:CDS | 40.0% | |
AGATTTCAAGATTGAGGGTG+AGG | + | chr7_2:56730761-56730780 | Msa1064220:CDS | 40.0% | |
!! | GCAAATTTTAGCAGTCAAGG+TGG | + | chr7_2:56730892-56730911 | Msa1064220:CDS | 40.0% |
!! | AATTTTAGCAGTCAAGGTGG+AGG | + | chr7_2:56730895-56730914 | Msa1064220:CDS | 40.0% |
GAAATCGCCAAAAAGCAAGT+AGG | + | chr7_2:56730917-56730936 | Msa1064220:CDS | 40.0% | |
!! | GAGACTTCCTACTTGCTTTT+TGG | - | chr7_2:56730927-56730946 | None:intergenic | 40.0% |
AAAAGCAAGTAGGAAGTCTC+GGG | + | chr7_2:56730927-56730946 | Msa1064220:CDS | 40.0% | |
! | TCTGGAATCGTCTTAGATTG+CGG | - | chr7_2:56731159-56731178 | None:intergenic | 40.0% |
TTTCCTTTCCTAGCAACCTA+AGG | - | chr7_2:56731342-56731361 | None:intergenic | 40.0% | |
GGTTCATCTGTAGTTTCCCT+TGG | + | chr7_2:56729119-56729138 | Msa1064220:intron | 45.0% | |
TTTCCCTTGGTTACCCTAAG+TGG | + | chr7_2:56729132-56729151 | Msa1064220:CDS | 45.0% | |
TTCCCTTGGTTACCCTAAGT+GGG | + | chr7_2:56729133-56729152 | Msa1064220:CDS | 45.0% | |
TTCCCACTTAGGGTAACCAA+GGG | - | chr7_2:56729138-56729157 | None:intergenic | 45.0% | |
TTACCCTAAGTGGGAAGATC+CGG | + | chr7_2:56729142-56729161 | Msa1064220:CDS | 45.0% | |
ATGGTTGCTGAAGCCAACAA+GGG | + | chr7_2:56729168-56729187 | Msa1064220:CDS | 45.0% | |
TGAAACACTGGAACCCTTGT+TGG | - | chr7_2:56729184-56729203 | None:intergenic | 45.0% | |
GGGTTCCAGTGTTTCAAACT+TGG | + | chr7_2:56729188-56729207 | Msa1064220:CDS | 45.0% | |
! | TTGGAGCTTCCCAATTTTCC+AGG | + | chr7_2:56729207-56729226 | Msa1064220:CDS | 45.0% |
TGGTGTCCTCCTGGAAAATT+GGG | - | chr7_2:56729219-56729238 | None:intergenic | 45.0% | |
TAAAGGATGAGTGTGTGGCA+TGG | + | chr7_2:56729580-56729599 | Msa1064220:CDS | 45.0% | |
CCATGGCACATATAACTCTC+TGG | - | chr7_2:56729644-56729663 | None:intergenic | 45.0% | |
CCAGAGAGTTATATGTGCCA+TGG | + | chr7_2:56729641-56729660 | Msa1064220:CDS | 45.0% | |
TATGTGCCATGGGAAGAATG+GGG | + | chr7_2:56729652-56729671 | Msa1064220:CDS | 45.0% | |
CTGCTATAGAAAAGGACCAG+AGG | + | chr7_2:56729784-56729803 | Msa1064220:CDS | 45.0% | |
CAAGAAAGTCAGGGGAATGA+TGG | - | chr7_2:56729859-56729878 | None:intergenic | 45.0% | |
AAGCTCAAGCCTACATGGAA+TGG | - | chr7_2:56729919-56729938 | None:intergenic | 45.0% | |
CTTTCAAGCTCAAGCCTACA+TGG | - | chr7_2:56729924-56729943 | None:intergenic | 45.0% | |
GTAGGCTTGAGCTTGAAAGA+AGG | + | chr7_2:56729925-56729944 | Msa1064220:CDS | 45.0% | |
CTTATACCATCTCTGCAGAG+TGG | + | chr7_2:56729987-56730006 | Msa1064220:CDS | 45.0% | |
TATACCATCTCTGCAGAGTG+GGG | + | chr7_2:56729989-56730008 | Msa1064220:CDS | 45.0% | |
AACTGTGTCCACGTCAAACA+AGG | - | chr7_2:56730018-56730037 | None:intergenic | 45.0% | |
!! | TTTCTTGCAGCGGATTGAAG+AGG | + | chr7_2:56730055-56730074 | Msa1064220:CDS | 45.0% |
GACTACGGATATGAATCCGA+TGG | + | chr7_2:56730089-56730108 | Msa1064220:CDS | 45.0% | |
GGATATGAATCCGATGGGAT+TGG | + | chr7_2:56730095-56730114 | Msa1064220:CDS | 45.0% | |
!! | TCCGATGGGATTGGTTCTAA+TGG | + | chr7_2:56730104-56730123 | Msa1064220:CDS | 45.0% |
!! | GGGATTGGTTCTAATGGACA+TGG | + | chr7_2:56730110-56730129 | Msa1064220:CDS | 45.0% |
TCAATGACACGGGCATAATC+AGG | - | chr7_2:56730239-56730258 | None:intergenic | 45.0% | |
! | TATGCCCGTGTCATTGATGA+TGG | + | chr7_2:56730242-56730261 | Msa1064220:CDS | 45.0% |
GGTGCATTGTCAACATGTAG+TGG | - | chr7_2:56730435-56730454 | None:intergenic | 45.0% | |
AGCGCAACTGCTCAAAATAC+AGG | - | chr7_2:56730606-56730625 | None:intergenic | 45.0% | |
AGAGAATCGAGAACTGAAGC+TGG | + | chr7_2:56730738-56730757 | Msa1064220:CDS | 45.0% | |
! | ACCTCACTTTCTAAGGGGAT+AGG | + | chr7_2:56730862-56730881 | Msa1064220:CDS | 45.0% |
TCCTATCCCCTTAGAAAGTG+AGG | - | chr7_2:56730866-56730885 | None:intergenic | 45.0% | |
AAAGCAAGTAGGAAGTCTCG+GGG | + | chr7_2:56730928-56730947 | Msa1064220:CDS | 45.0% | |
GTTGTGATGGTCACCTGAAA+AGG | - | chr7_2:56731050-56731069 | None:intergenic | 45.0% | |
TGGAATCGTCTTAGATTGCG+GGG | - | chr7_2:56731157-56731176 | None:intergenic | 45.0% | |
CTGGAATCGTCTTAGATTGC+GGG | - | chr7_2:56731158-56731177 | None:intergenic | 45.0% | |
ACACCTCCATTCCTTTCTGT+TGG | + | chr7_2:56731278-56731297 | Msa1064220:three_prime_UTR | 45.0% | |
!! | TTTTGAGGACGCCAACAGAA+AGG | - | chr7_2:56731292-56731311 | None:intergenic | 45.0% |
! | AACTTGCTCCTTAGGTTGCT+AGG | + | chr7_2:56731331-56731350 | Msa1064220:three_prime_UTR | 45.0% |
GTACGGATGATTGCAGGTTC+AGG | - | chr7_2:56728092-56728111 | None:intergenic | 50.0% | |
CTTCCCACTTAGGGTAACCA+AGG | - | chr7_2:56729139-56729158 | None:intergenic | 50.0% | |
CTTCCGGATCTTCCCACTTA+GGG | - | chr7_2:56729148-56729167 | None:intergenic | 50.0% | |
TCTTCCGGATCTTCCCACTT+AGG | - | chr7_2:56729149-56729168 | None:intergenic | 50.0% | |
AAGTGGGAAGATCCGGAAGA+TGG | + | chr7_2:56729149-56729168 | Msa1064220:CDS | 50.0% | |
TGGCTTCAGCAACCATCTTC+CGG | - | chr7_2:56729164-56729183 | None:intergenic | 50.0% | |
GATGGTTGCTGAAGCCAACA+AGG | + | chr7_2:56729167-56729186 | Msa1064220:CDS | 50.0% | |
! | GAGCTTCCCAATTTTCCAGG+AGG | + | chr7_2:56729210-56729229 | Msa1064220:CDS | 50.0% |
CTGGTGTCCTCCTGGAAAAT+TGG | - | chr7_2:56729220-56729239 | None:intergenic | 50.0% | |
TCAAATGTCTGGTGTCCTCC+TGG | - | chr7_2:56729228-56729247 | None:intergenic | 50.0% | |
ATGTGCCATGGGAAGAATGG+GGG | + | chr7_2:56729653-56729672 | Msa1064220:CDS | 50.0% | |
TCTAACCCCCATTCTTCCCA+TGG | - | chr7_2:56729661-56729680 | None:intergenic | 50.0% | |
AAAGGACCAGAGGACAACTG+TGG | + | chr7_2:56729794-56729813 | Msa1064220:CDS | 50.0% | |
TGGTTTCCACAGTTGTCCTC+TGG | - | chr7_2:56729803-56729822 | None:intergenic | 50.0% | |
! | TAGGTGCCACCATTCCATGT+AGG | + | chr7_2:56729907-56729926 | Msa1064220:CDS | 50.0% |
CTCAAGCCTACATGGAATGG+TGG | - | chr7_2:56729916-56729935 | None:intergenic | 50.0% | |
TTGACGTGGACACAGTTCAC+AGG | + | chr7_2:56730021-56730040 | Msa1064220:CDS | 50.0% | |
! | GCGGATTGAAGAGGAAGAAG+CGG | + | chr7_2:56730064-56730083 | Msa1064220:CDS | 50.0% |
GAGGAAGAAGCGGAAGACTA+CGG | + | chr7_2:56730074-56730093 | Msa1064220:CDS | 50.0% | |
ACCATGCTGCACAGAATGAC+AGG | + | chr7_2:56730554-56730573 | Msa1064220:CDS | 50.0% | |
ACTTGTACCACCATCTGCAG+TGG | - | chr7_2:56730583-56730602 | None:intergenic | 50.0% | |
GCGCTTGAAAAATGCCGTGT+CGG | + | chr7_2:56730621-56730640 | Msa1064220:CDS | 50.0% | |
CGCTTGAAAAATGCCGTGTC+GGG | + | chr7_2:56730622-56730641 | Msa1064220:CDS | 50.0% | |
GCTTGAAAAATGCCGTGTCG+GGG | + | chr7_2:56730623-56730642 | Msa1064220:CDS | 50.0% | |
GTAGTTGTCCCTAGGAGACA+TGG | - | chr7_2:56730704-56730723 | None:intergenic | 50.0% | |
AGTGATGCGTAGTTGTCCCT+AGG | - | chr7_2:56730712-56730731 | None:intergenic | 50.0% | |
GAACAGAGGGGAAAAATGGC+AGG | + | chr7_2:56730950-56730969 | Msa1064220:CDS | 50.0% | |
AGGGGAAAAATGGCAGGAGT+AGG | + | chr7_2:56730956-56730975 | Msa1064220:CDS | 50.0% | |
ATTGCGGGGACTATGAAGAG+TGG | - | chr7_2:56731143-56731162 | None:intergenic | 50.0% | |
GCAGTGTCTCTGTATGCATC+TGG | - | chr7_2:56731177-56731196 | None:intergenic | 50.0% | |
! | AGAGACACTGCTTGTTGCAG+TGG | + | chr7_2:56731186-56731205 | Msa1064220:three_prime_UTR | 50.0% |
TTGTTGCAGTGGCTACCAAC+AGG | + | chr7_2:56731197-56731216 | Msa1064220:three_prime_UTR | 50.0% | |
ACGCCAACAGAAAGGAATGG+AGG | - | chr7_2:56731284-56731303 | None:intergenic | 50.0% | |
AGGACGCCAACAGAAAGGAA+TGG | - | chr7_2:56731287-56731306 | None:intergenic | 50.0% | |
! | GCTCCTTAGGTTGCTAGGAA+AGG | + | chr7_2:56731336-56731355 | Msa1064220:three_prime_UTR | 50.0% |
TCCTCCTCCTCCTTGTGTCT+GGG | - | chr7_2:56728207-56728226 | None:intergenic | 55.0% | |
ACTCGGCTGCACAACGTAGT+CGG | - | chr7_2:56729308-56729327 | None:intergenic | 55.0% | |
AGGATGAGTGTGTGGCATGG+TGG | + | chr7_2:56729583-56729602 | Msa1064220:CDS | 55.0% | |
! | TGGGGACTCCTTGTTTGACG+TGG | + | chr7_2:56730007-56730026 | Msa1064220:CDS | 55.0% |
GCACCTCTTTCCCTCTGTTC+AGG | + | chr7_2:56730450-56730469 | Msa1064220:intron | 55.0% | |
GCTGTATGGGCCTGAACAGA+GGG | - | chr7_2:56730463-56730482 | None:intergenic | 55.0% | |
TGCTGTATGGGCCTGAACAG+AGG | - | chr7_2:56730464-56730483 | None:intergenic | 55.0% | |
GCCTGTCATTCTGTGCAGCA+TGG | - | chr7_2:56730558-56730577 | None:intergenic | 55.0% | |
TGACAGGCTTCCACTGCAGA+TGG | + | chr7_2:56730570-56730589 | Msa1064220:CDS | 55.0% | |
ATCTCCTGAACTCCCCGACA+CGG | - | chr7_2:56730638-56730657 | None:intergenic | 55.0% | |
TGTCGGGGAGTTCAGGAGAT+GGG | + | chr7_2:56730638-56730657 | Msa1064220:CDS | 55.0% | |
CTAGGAGACATGGCTGCACT+CGG | - | chr7_2:56730694-56730713 | None:intergenic | 55.0% | |
GAGTGCAGCCATGTCTCCTA+GGG | + | chr7_2:56730693-56730712 | Msa1064220:CDS | 55.0% | |
GGGACAACTACGCATCACTG+CGG | + | chr7_2:56730713-56730732 | Msa1064220:CDS | 55.0% | |
! | GAGGCTGAGTGAGTTGGAGA+AGG | + | chr7_2:56730780-56730799 | Msa1064220:CDS | 55.0% |
TAGGAAGTCTCGGGGAACAG+AGG | + | chr7_2:56730936-56730955 | Msa1064220:CDS | 55.0% | |
AGGAAGTCTCGGGGAACAGA+GGG | + | chr7_2:56730937-56730956 | Msa1064220:CDS | 55.0% | |
CGGGGAACAGAGGGGAAAAA+TGG | + | chr7_2:56730946-56730965 | Msa1064220:CDS | 55.0% | |
! | GGTGTTATGCCTCTGCGACT+AGG | - | chr7_2:56731263-56731282 | None:intergenic | 55.0% |
GCAGACACAGCCCAGACACA+AGG | + | chr7_2:56728194-56728213 | Msa1064220:five_prime_UTR | 60.0% | |
GACACAGCCCAGACACAAGG+AGG | + | chr7_2:56728197-56728216 | Msa1064220:five_prime_UTR | 60.0% | |
ACAGCCCAGACACAAGGAGG+AGG | + | chr7_2:56728200-56728219 | Msa1064220:five_prime_UTR | 60.0% | |
CTCCTCCTCCTCCTTGTGTC+TGG | - | chr7_2:56728208-56728227 | None:intergenic | 60.0% | |
CAGACACAAGGAGGAGGAGG+AGG | + | chr7_2:56728206-56728225 | Msa1064220:five_prime_UTR | 60.0% | |
CTCGGCTGCACAACGTAGTC+GGG | - | chr7_2:56729307-56729326 | None:intergenic | 60.0% | |
GAGTCCCCACTCTGCAGAGA+TGG | - | chr7_2:56729996-56730015 | None:intergenic | 60.0% | |
GGGCCTGAACAGAGGGAAAG+AGG | - | chr7_2:56730456-56730475 | None:intergenic | 60.0% | |
CAGGCTTCCACTGCAGATGG+TGG | + | chr7_2:56730573-56730592 | Msa1064220:CDS | 60.0% | |
AATGCCGTGTCGGGGAGTTC+AGG | + | chr7_2:56730631-56730650 | Msa1064220:CDS | 60.0% | |
GTGTCGGGGAGTTCAGGAGA+TGG | + | chr7_2:56730637-56730656 | Msa1064220:CDS | 60.0% | |
CGAGTGCAGCCATGTCTCCT+AGG | + | chr7_2:56730692-56730711 | Msa1064220:CDS | 60.0% | |
GAGGGTGAGGCTGAGTGAGT+TGG | + | chr7_2:56730774-56730793 | Msa1064220:CDS | 60.0% | |
GGAAGTCTCGGGGAACAGAG+GGG | + | chr7_2:56730938-56730957 | Msa1064220:CDS | 60.0% | |
GGAGAATGGCCTAGTCGCAG+AGG | + | chr7_2:56731251-56731270 | Msa1064220:three_prime_UTR | 60.0% | |
GCCCAGACACAAGGAGGAGG+AGG | + | chr7_2:56728203-56728222 | Msa1064220:five_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 56727985 | 56731457 | 56727985 | ID=Msa1064220;Name=Msa1064220 |
chr7_2 | mRNA | 56727985 | 56731457 | 56727985 | ID=Msa1064220-mRNA-1;Parent=Msa1064220;Name=Msa1064220-mRNA-1;_AED=0.01;_eAED=0.01;_QI=313|1|1|1|1|1|4|461|612 |
chr7_2 | exon | 56727985 | 56728380 | 56727985 | ID=Msa1064220-mRNA-1:exon:10708;Parent=Msa1064220-mRNA-1 |
chr7_2 | exon | 56728721 | 56728787 | 56728721 | ID=Msa1064220-mRNA-1:exon:10709;Parent=Msa1064220-mRNA-1 |
chr7_2 | exon | 56729132 | 56730295 | 56729132 | ID=Msa1064220-mRNA-1:exon:10710;Parent=Msa1064220-mRNA-1 |
chr7_2 | exon | 56730472 | 56731457 | 56730472 | ID=Msa1064220-mRNA-1:exon:10711;Parent=Msa1064220-mRNA-1 |
chr7_2 | five_prime_UTR | 56727985 | 56728297 | 56727985 | ID=Msa1064220-mRNA-1:five_prime_utr;Parent=Msa1064220-mRNA-1 |
chr7_2 | CDS | 56728298 | 56728380 | 56728298 | ID=Msa1064220-mRNA-1:cds;Parent=Msa1064220-mRNA-1 |
chr7_2 | CDS | 56728721 | 56728787 | 56728721 | ID=Msa1064220-mRNA-1:cds;Parent=Msa1064220-mRNA-1 |
chr7_2 | CDS | 56729132 | 56730295 | 56729132 | ID=Msa1064220-mRNA-1:cds;Parent=Msa1064220-mRNA-1 |
chr7_2 | CDS | 56730472 | 56730996 | 56730472 | ID=Msa1064220-mRNA-1:cds;Parent=Msa1064220-mRNA-1 |
chr7_2 | three_prime_UTR | 56730997 | 56731457 | 56730997 | ID=Msa1064220-mRNA-1:three_prime_utr;Parent=Msa1064220-mRNA-1 |
Gene Sequence |
Protein sequence |