Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349690 | XP_003611079.1 | 99.303 | 287 | 2 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349690 | sp|Q7XSQ9|PIP12_ORYSJ | 88.112 | 286 | 32 | 2 | 3 | 287 | 4 | 288 | 0.0 | 515 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349690 | G7KC21 | 99.303 | 287 | 2 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014770 | Msa1349690 | 0.852765 | 3.724901e-61 | -8.615850e-47 |
| Msa0025160 | Msa1349690 | 0.857380 | 1.697770e-62 | -8.615850e-47 |
| Msa0032460 | Msa1349690 | 0.867310 | 1.504390e-65 | -8.615850e-47 |
| Msa0033220 | Msa1349690 | 0.820266 | 7.510470e-53 | -8.615850e-47 |
| Msa0035270 | Msa1349690 | 0.808050 | 3.746194e-50 | -8.615850e-47 |
| Msa0035340 | Msa1349690 | 0.815774 | 7.783239e-52 | -8.615850e-47 |
| Msa0035380 | Msa1349690 | 0.805093 | 1.576215e-49 | -8.615850e-47 |
| Msa0044160 | Msa1349690 | 0.803642 | 3.162279e-49 | -8.615850e-47 |
| Msa0054390 | Msa1349690 | 0.800253 | 1.572045e-48 | -8.615850e-47 |
| Msa0072520 | Msa1349690 | 0.848408 | 6.246378e-60 | -8.615850e-47 |
| Msa0077340 | Msa1349690 | 0.827757 | 1.311621e-54 | -8.615850e-47 |
| Msa0079880 | Msa1349690 | 0.811161 | 8.038356e-51 | -8.615850e-47 |
| Msa0080030 | Msa1349690 | 0.814066 | 1.861054e-51 | -8.615850e-47 |
| Msa0080610 | Msa1349690 | 0.810812 | 9.567744e-51 | -8.615850e-47 |
| Msa0080820 | Msa1349690 | 0.813335 | 2.696895e-51 | -8.615850e-47 |
| Msa0102110 | Msa1349690 | 0.802055 | 6.726911e-49 | -8.615850e-47 |
| Msa0108630 | Msa1349690 | 0.832731 | 7.995699e-56 | -8.615850e-47 |
| Msa0108880 | Msa1349690 | 0.817850 | 2.662649e-52 | -8.615850e-47 |
| Msa1349690 | Msa1357070 | 0.806221 | 9.138308e-50 | -8.615850e-47 |
| Msa1349690 | Msa1358290 | 0.988002 | 2.421812e-172 | -8.615850e-47 |
| Msa1349690 | Msa1363010 | 0.854399 | 1.263067e-61 | -8.615850e-47 |
| Msa1349690 | Msa1374790 | 0.803839 | 2.877936e-49 | -8.615850e-47 |
| Msa1349690 | Msa1375350 | 0.851606 | 7.957128e-61 | -8.615850e-47 |
| Msa1349690 | Msa1381030 | 0.806881 | 6.631391e-50 | -8.615850e-47 |
| Msa1349690 | Msa1383310 | 0.835102 | 2.040299e-56 | -8.615850e-47 |
| Msa1349690 | Msa1387500 | 0.806170 | 9.367420e-50 | -8.615850e-47 |
| Msa1349690 | Msa1392740 | 0.995553 | 1.983262e-217 | -8.615850e-47 |
| Msa1349690 | Msa1393560 | 0.814921 | 1.204515e-51 | -8.615850e-47 |
| Msa1349690 | Msa1393780 | 0.813633 | 2.318749e-51 | -8.615850e-47 |
| Msa1349690 | Msa1405460 | 0.829020 | 6.499864e-55 | -8.615850e-47 |
| Msa1349690 | Msa1407840 | 0.862107 | 6.403792e-64 | -8.615850e-47 |
| Msa1349690 | Msa1409410 | 0.824338 | 8.522087e-54 | -8.615850e-47 |
| Msa1349690 | Msa1410160 | 0.813067 | 3.087209e-51 | -8.615850e-47 |
| Msa1349690 | Msa1414170 | 0.824291 | 8.739944e-54 | -8.615850e-47 |
| Msa1349690 | Msa1426320 | 0.816218 | 6.192834e-52 | -8.615850e-47 |
| Msa1349690 | Msa1437810 | 0.865258 | 6.726687e-65 | -8.615850e-47 |
| Msa1349690 | Msa1440430 | 0.806100 | 9.691243e-50 | -8.615850e-47 |
| Msa1349690 | Msa1447100 | 0.804938 | 1.698509e-49 | -8.615850e-47 |
| Msa1349690 | Msa1451820 | 0.803132 | 4.034050e-49 | -8.615850e-47 |
| Msa1349690 | Msa1454500 | 0.851724 | 7.365097e-61 | -8.615850e-47 |
| Msa1349690 | Msa1462490 | 0.810987 | 8.771518e-51 | -8.615850e-47 |
| Msa0607800 | Msa1349690 | 0.800374 | 1.485353e-48 | -8.615850e-47 |
| Msa0610690 | Msa1349690 | 0.815915 | 7.236866e-52 | -8.615850e-47 |
| Msa0615630 | Msa1349690 | 0.802463 | 5.542660e-49 | -8.615850e-47 |
| Msa0619710 | Msa1349690 | 0.835829 | 1.336450e-56 | -8.615850e-47 |
| Msa0625340 | Msa1349690 | 0.821187 | 4.612572e-53 | -8.615850e-47 |
| Msa0625620 | Msa1349690 | 0.805317 | 1.415266e-49 | -8.615850e-47 |
| Msa0687090 | Msa1349690 | 0.811372 | 7.236481e-51 | -8.615850e-47 |
| Msa0689660 | Msa1349690 | 0.834068 | 3.711545e-56 | -8.615850e-47 |
| Msa0703950 | Msa1349690 | 0.822659 | 2.104035e-53 | -8.615850e-47 |
| Msa0706150 | Msa1349690 | 0.831076 | 2.048758e-55 | -8.615850e-47 |
| Msa0707260 | Msa1349690 | 0.813393 | 2.619137e-51 | -8.615850e-47 |
| Msa0716480 | Msa1349690 | 0.850780 | 1.360610e-60 | -8.615850e-47 |
| Msa0733080 | Msa1349690 | 0.809547 | 1.792972e-50 | -8.615850e-47 |
| Msa0740710 | Msa1349690 | 0.831215 | 1.894174e-55 | -8.615850e-47 |
| Msa0747000 | Msa1349690 | 0.800306 | 1.533571e-48 | -8.615850e-47 |
| Msa0752780 | Msa1349690 | 0.968307 | 1.716312e-128 | -8.615850e-47 |
| Msa0761310 | Msa1349690 | 0.812780 | 3.568992e-51 | -8.615850e-47 |
| Msa0774060 | Msa1349690 | 0.808161 | 3.547522e-50 | -8.615850e-47 |
| Msa0780910 | Msa1349690 | 0.850531 | 1.598562e-60 | -8.615850e-47 |
| Msa0798080 | Msa1349690 | 0.810147 | 1.332151e-50 | -8.615850e-47 |
| Msa0811690 | Msa1349690 | 0.849923 | 2.367213e-60 | -8.615850e-47 |
| Msa0821160 | Msa1349690 | 0.836414 | 9.492661e-57 | -8.615850e-47 |
| Msa0829300 | Msa1349690 | 0.804215 | 2.404139e-49 | -8.615850e-47 |
| Msa0829330 | Msa1349690 | 0.802683 | 4.993089e-49 | -8.615850e-47 |
| Msa0837460 | Msa1349690 | 0.854246 | 1.398903e-61 | -8.615850e-47 |
| Msa0120790 | Msa1349690 | 0.825901 | 3.641406e-54 | -8.615850e-47 |
| Msa0125360 | Msa1349690 | 0.811723 | 6.071632e-51 | -8.615850e-47 |
| Msa0154620 | Msa1349690 | 0.847271 | 1.284881e-59 | -8.615850e-47 |
| Msa0165640 | Msa1349690 | 0.801003 | 1.105418e-48 | -8.615850e-47 |
| Msa0173290 | Msa1349690 | 0.858951 | 5.789727e-63 | -8.615850e-47 |
| Msa0176060 | Msa1349690 | 0.812727 | 3.665109e-51 | -8.615850e-47 |
| Msa0183710 | Msa1349690 | 0.806964 | 6.368785e-50 | -8.615850e-47 |
| Msa0185960 | Msa1349690 | 0.866492 | 2.741633e-65 | -8.615850e-47 |
| Msa1262590 | Msa1349690 | 0.838896 | 2.189530e-57 | -8.615850e-47 |
| Msa1263780 | Msa1349690 | 0.803925 | 2.762360e-49 | -8.615850e-47 |
| Msa1277110 | Msa1349690 | 0.805141 | 1.540785e-49 | -8.615850e-47 |
| Msa1297640 | Msa1349690 | 0.812449 | 4.215630e-51 | -8.615850e-47 |
| Msa1297690 | Msa1349690 | 0.810981 | 8.795987e-51 | -8.615850e-47 |
| Msa1303880 | Msa1349690 | 0.866731 | 2.301625e-65 | -8.615850e-47 |
| Msa1306570 | Msa1349690 | 0.849043 | 4.164767e-60 | -8.615850e-47 |
| Msa0381730 | Msa1349690 | 0.819776 | 9.725762e-53 | -8.615850e-47 |
| Msa0401060 | Msa1349690 | 0.810448 | 1.146715e-50 | -8.615850e-47 |
| Msa0422050 | Msa1349690 | 0.831974 | 1.231511e-55 | -8.615850e-47 |
| Msa0431200 | Msa1349690 | 0.832686 | 8.203691e-56 | -8.615850e-47 |
| Msa0433630 | Msa1349690 | 0.804921 | 1.712620e-49 | -8.615850e-47 |
| Msa0440350 | Msa1349690 | 0.800850 | 1.187566e-48 | -8.615850e-47 |
| Msa0466880 | Msa1349690 | 0.801212 | 1.001854e-48 | -8.615850e-47 |
| Msa0468700 | Msa1349690 | 0.851912 | 6.514319e-61 | -8.615850e-47 |
| Msa0476280 | Msa1349690 | 0.804039 | 2.615422e-49 | -8.615850e-47 |
| Msa0994720 | Msa1349690 | 0.829257 | 5.694458e-55 | -8.615850e-47 |
| Msa1002640 | Msa1349690 | 0.822949 | 1.801703e-53 | -8.615850e-47 |
| Msa1025560 | Msa1349690 | 0.836617 | 8.427396e-57 | -8.615850e-47 |
| Msa1031170 | Msa1349690 | 0.801474 | 8.851964e-49 | -8.615850e-47 |
| Msa1033430 | Msa1349690 | 0.817234 | 3.666187e-52 | -8.615850e-47 |
| Msa1034600 | Msa1349690 | 0.845229 | 4.625709e-59 | -8.615850e-47 |
| Msa1040150 | Msa1349690 | 0.833757 | 4.440081e-56 | -8.615850e-47 |
| Msa1042160 | Msa1349690 | 0.824215 | 9.107161e-54 | -8.615850e-47 |
| Msa1042190 | Msa1349690 | 0.826431 | 2.722936e-54 | -8.615850e-47 |
| Msa1064220 | Msa1349690 | 0.801184 | 1.014795e-48 | -8.615850e-47 |
| Msa1064370 | Msa1349690 | 0.822623 | 2.145231e-53 | -8.615850e-47 |
| Msa1073050 | Msa1349690 | 0.831044 | 2.086663e-55 | -8.615850e-47 |
| Msa1074370 | Msa1349690 | 0.802961 | 4.374630e-49 | -8.615850e-47 |
| Msa1077990 | Msa1349690 | 0.837038 | 6.578866e-57 | -8.615850e-47 |
| Msa1078820 | Msa1349690 | 0.813291 | 2.757812e-51 | -8.615850e-47 |
| Msa1080000 | Msa1349690 | 0.809506 | 1.830036e-50 | -8.615850e-47 |
| Msa1104110 | Msa1349690 | 0.816492 | 5.377936e-52 | -8.615850e-47 |
| Msa1105640 | Msa1349690 | 0.821996 | 2.999019e-53 | -8.615850e-47 |
| Msa0275070 | Msa1349690 | 0.801627 | 8.235457e-49 | -8.615850e-47 |
| Msa0275080 | Msa1349690 | 0.808977 | 2.375275e-50 | -8.615850e-47 |
| Msa0286580 | Msa1349690 | 0.803246 | 3.819576e-49 | -8.615850e-47 |
| Msa0296300 | Msa1349690 | 0.808283 | 3.342096e-50 | -8.615850e-47 |
| Msa0315980 | Msa1349690 | 0.821063 | 4.927642e-53 | -8.615850e-47 |
| Msa0325350 | Msa1349690 | 0.826150 | 3.177398e-54 | -8.615850e-47 |
| Msa0346740 | Msa1349690 | 0.865708 | 4.853389e-65 | -8.615850e-47 |
| Msa0355080 | Msa1349690 | -0.810178 | 1.311440e-50 | -8.615850e-47 |
| Msa1114690 | Msa1349690 | 0.819943 | 8.905053e-53 | -8.615850e-47 |
| Msa1123970 | Msa1349690 | 0.813340 | 2.690146e-51 | -8.615850e-47 |
| Msa1132530 | Msa1349690 | 0.800120 | 1.673132e-48 | -8.615850e-47 |
| Msa1147700 | Msa1349690 | 0.817155 | 3.819232e-52 | -8.615850e-47 |
| Msa1154550 | Msa1349690 | 0.816292 | 5.962341e-52 | -8.615850e-47 |
| Msa1167470 | Msa1349690 | 0.832648 | 8.386505e-56 | -8.615850e-47 |
| Msa1169650 | Msa1349690 | 0.810443 | 1.150054e-50 | -8.615850e-47 |
| Msa1194240 | Msa1349690 | 0.802894 | 4.516365e-49 | -8.615850e-47 |
| Msa1205110 | Msa1349690 | 0.828233 | 1.007439e-54 | -8.615850e-47 |
| Msa1216090 | Msa1349690 | 0.849262 | 3.620686e-60 | -8.615850e-47 |
| Msa1216110 | Msa1349690 | 0.829741 | 4.343776e-55 | -8.615850e-47 |
| Msa1216340 | Msa1349690 | 0.866485 | 2.754952e-65 | -8.615850e-47 |
| Msa1216590 | Msa1349690 | 0.801080 | 1.065958e-48 | -8.615850e-47 |
| Msa1219930 | Msa1349690 | 0.871482 | 6.606241e-67 | -8.615850e-47 |
| Msa0500650 | Msa1349690 | 0.814452 | 1.529311e-51 | -8.615850e-47 |
| Msa0514580 | Msa1349690 | 0.837341 | 5.503651e-57 | -8.615850e-47 |
| Msa0517250 | Msa1349690 | 0.821846 | 3.249346e-53 | -8.615850e-47 |
| Msa0520260 | Msa1349690 | 0.842144 | 3.093070e-58 | -8.615850e-47 |
| Msa0521510 | Msa1349690 | 0.830792 | 2.405523e-55 | -8.615850e-47 |
| Msa0529030 | Msa1349690 | 0.830456 | 2.906647e-55 | -8.615850e-47 |
| Msa0567610 | Msa1349690 | 0.802044 | 6.761068e-49 | -8.615850e-47 |
| Msa0570010 | Msa1349690 | 0.819145 | 1.354495e-52 | -8.615850e-47 |
| Msa0579080 | Msa1349690 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0579160 | Msa1349690 | 0.830541 | 2.770679e-55 | -8.615850e-47 |
| Msa0579220 | Msa1349690 | 0.831069 | 2.056982e-55 | -8.615850e-47 |
| Msa0591170 | Msa1349690 | 0.836355 | 9.826080e-57 | -8.615850e-47 |
| Msa0851850 | Msa1349690 | 0.834606 | 2.718944e-56 | -8.615850e-47 |
| Msa0865420 | Msa1349690 | 0.819929 | 8.969642e-53 | -8.615850e-47 |
| Msa0894790 | Msa1349690 | 0.832877 | 7.355487e-56 | -8.615850e-47 |
| Msa0901120 | Msa1349690 | 0.809903 | 1.503200e-50 | -8.615850e-47 |
| Msa0909760 | Msa1349690 | 0.809336 | 1.989885e-50 | -8.615850e-47 |
| Msa0921590 | Msa1349690 | 0.830279 | 3.211498e-55 | -8.615850e-47 |
| Msa0956350 | Msa1349690 | 0.806657 | 7.395401e-50 | -8.615850e-47 |
| Msa0967070 | Msa1349690 | 0.807440 | 5.049571e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349690 | MtrunA17_Chr5g0397391 | 99.303 | 287 | 2 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Msa1349690 | MtrunA17_Chr8g0386961 | 93.706 | 286 | 18 | 0 | 1 | 286 | 1 | 286 | 0.0 | 553 |
| Msa1349690 | MtrunA17_Chr4g0006001 | 84.722 | 288 | 40 | 2 | 2 | 286 | 3 | 289 | 3.04e-180 | 498 |
| Msa1349690 | MtrunA17_Chr5g0436701 | 84.965 | 286 | 41 | 1 | 3 | 286 | 4 | 289 | 5.43e-180 | 497 |
| Msa1349690 | MtrunA17_Chr3g0113211 | 84.669 | 287 | 42 | 1 | 3 | 287 | 4 | 290 | 2.45e-179 | 495 |
| Msa1349690 | MtrunA17_Chr7g0264111 | 74.525 | 263 | 60 | 2 | 29 | 285 | 16 | 277 | 8.86e-141 | 398 |
| Msa1349690 | MtrunA17_Chr2g0326621 | 68.889 | 270 | 76 | 2 | 23 | 285 | 11 | 279 | 6.05e-136 | 385 |
| Msa1349690 | MtrunA17_Chr1g0199731 | 71.321 | 265 | 69 | 2 | 27 | 285 | 14 | 277 | 2.30e-135 | 384 |
| Msa1349690 | MtrunA17_Chr4g0029071 | 68.914 | 267 | 76 | 2 | 25 | 285 | 12 | 277 | 1.13e-131 | 375 |
| Msa1349690 | MtrunA17_Chr3g0145671 | 69.057 | 265 | 81 | 1 | 21 | 285 | 6 | 269 | 2.29e-131 | 374 |
| Msa1349690 | MtrunA17_Chr1g0188771 | 35.776 | 232 | 130 | 6 | 52 | 278 | 21 | 238 | 8.23e-33 | 121 |
| Msa1349690 | MtrunA17_Chr6g0478191 | 39.834 | 241 | 127 | 8 | 52 | 287 | 21 | 248 | 9.67e-33 | 120 |
| Msa1349690 | MtrunA17_Chr2g0331261 | 35.897 | 234 | 135 | 5 | 47 | 277 | 15 | 236 | 2.08e-32 | 120 |
| Msa1349690 | MtrunA17_Chr8g0340161 | 36.752 | 234 | 131 | 6 | 46 | 274 | 11 | 232 | 4.76e-32 | 119 |
| Msa1349690 | MtrunA17_Chr1g0212671 | 34.836 | 244 | 139 | 7 | 41 | 278 | 10 | 239 | 4.47e-29 | 111 |
| Msa1349690 | MtrunA17_Chr7g0264961 | 33.745 | 243 | 137 | 7 | 42 | 277 | 11 | 236 | 3.72e-28 | 108 |
| Msa1349690 | MtrunA17_Chr7g0222791 | 34.426 | 244 | 140 | 7 | 41 | 278 | 10 | 239 | 4.23e-28 | 108 |
| Msa1349690 | MtrunA17_Chr4g0030861 | 32.773 | 238 | 145 | 5 | 41 | 275 | 10 | 235 | 9.84e-28 | 107 |
| Msa1349690 | MtrunA17_Chr1g0146161 | 34.199 | 231 | 125 | 7 | 52 | 275 | 19 | 229 | 1.22e-27 | 107 |
| Msa1349690 | MtrunA17_Chr5g0399341 | 37.168 | 226 | 126 | 6 | 52 | 274 | 19 | 231 | 1.12e-26 | 104 |
| Msa1349690 | MtrunA17_Chr1g0146171 | 33.906 | 233 | 123 | 8 | 52 | 275 | 19 | 229 | 2.58e-26 | 103 |
| Msa1349690 | MtrunA17_Chr5g0435051 | 29.688 | 192 | 122 | 4 | 84 | 275 | 68 | 246 | 2.79e-19 | 85.1 |
| Msa1349690 | MtrunA17_Chr8g0379901 | 29.289 | 239 | 145 | 7 | 43 | 277 | 30 | 248 | 6.30e-19 | 84.3 |
| Msa1349690 | MtrunA17_Chr2g0284591 | 32.203 | 236 | 137 | 7 | 55 | 287 | 39 | 254 | 6.97e-19 | 84.3 |
| Msa1349690 | MtrunA17_Chr5g0426131 | 27.632 | 228 | 150 | 5 | 47 | 274 | 32 | 244 | 9.60e-19 | 83.6 |
| Msa1349690 | MtrunA17_Chr3g0079421 | 31.250 | 192 | 119 | 4 | 84 | 275 | 54 | 232 | 4.64e-18 | 81.6 |
| Msa1349690 | MtrunA17_Chr2g0284611 | 30.705 | 241 | 144 | 7 | 50 | 287 | 36 | 256 | 1.04e-17 | 80.9 |
| Msa1349690 | MtrunA17_Chr2g0284631 | 28.634 | 227 | 146 | 6 | 41 | 267 | 80 | 290 | 1.60e-17 | 81.3 |
| Msa1349690 | MtrunA17_Chr4g0038591 | 28.205 | 195 | 118 | 7 | 99 | 279 | 95 | 281 | 3.23e-17 | 80.5 |
| Msa1349690 | MtrunA17_Chr8g0379911 | 27.197 | 239 | 157 | 6 | 49 | 287 | 35 | 256 | 5.34e-17 | 79.0 |
| Msa1349690 | MtrunA17_Chr4g0038611 | 29.688 | 192 | 119 | 6 | 99 | 279 | 32 | 218 | 5.63e-17 | 79.0 |
| Msa1349690 | MtrunA17_Chr4g0020781 | 32.836 | 201 | 109 | 7 | 84 | 278 | 15 | 195 | 5.86e-17 | 77.8 |
| Msa1349690 | MtrunA17_Chr2g0284581 | 29.614 | 233 | 147 | 6 | 55 | 287 | 41 | 256 | 1.22e-16 | 78.2 |
| Msa1349690 | MtrunA17_Chr4g0001221 | 28.302 | 212 | 135 | 6 | 56 | 267 | 79 | 273 | 5.26e-16 | 76.6 |
| Msa1349690 | MtrunA17_Chr7g0217331 | 27.966 | 236 | 150 | 7 | 50 | 284 | 35 | 251 | 5.33e-16 | 76.3 |
| Msa1349690 | MtrunA17_Chr2g0284601 | 30.653 | 199 | 124 | 4 | 89 | 287 | 24 | 208 | 6.15e-16 | 75.1 |
| Msa1349690 | MtrunA17_Chr4g0044201 | 25.664 | 226 | 135 | 6 | 55 | 277 | 38 | 233 | 9.50e-16 | 75.5 |
| Msa1349690 | MtrunA17_Chr2g0333771 | 30.516 | 213 | 129 | 7 | 56 | 267 | 84 | 278 | 1.61e-15 | 75.5 |
| Msa1349690 | MtrunA17_Chr1g0201331 | 28.319 | 226 | 142 | 8 | 56 | 279 | 78 | 285 | 6.09e-13 | 67.8 |
| Msa1349690 | MtrunA17_Chr1g0184541 | 24.820 | 278 | 184 | 7 | 2 | 272 | 6 | 265 | 2.72e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1349690 | AT4G00430.1 | 86.667 | 285 | 37 | 1 | 3 | 287 | 4 | 287 | 0.0 | 507 |
| Msa1349690 | AT2G45960.1 | 85.965 | 285 | 38 | 2 | 3 | 287 | 4 | 286 | 0.0 | 499 |
| Msa1349690 | AT4G23400.1 | 87.324 | 284 | 35 | 1 | 3 | 286 | 4 | 286 | 1.16e-175 | 486 |
| Msa1349690 | AT1G01620.1 | 87.018 | 285 | 35 | 2 | 3 | 287 | 4 | 286 | 2.05e-174 | 483 |
| Msa1349690 | AT3G61430.2 | 85.614 | 285 | 39 | 2 | 3 | 287 | 4 | 286 | 3.82e-172 | 477 |
| Msa1349690 | AT3G61430.1 | 85.614 | 285 | 39 | 2 | 3 | 287 | 4 | 286 | 3.82e-172 | 477 |
| Msa1349690 | AT2G45960.2 | 85.827 | 254 | 34 | 2 | 3 | 256 | 4 | 255 | 1.52e-159 | 445 |
| Msa1349690 | AT2G45960.3 | 85.827 | 254 | 34 | 2 | 3 | 256 | 4 | 255 | 4.57e-158 | 442 |
| Msa1349690 | AT1G01620.2 | 89.302 | 215 | 22 | 1 | 73 | 287 | 1 | 214 | 1.50e-138 | 389 |
| Msa1349690 | AT2G37170.2 | 72.692 | 260 | 64 | 3 | 27 | 280 | 55 | 313 | 4.58e-135 | 385 |
| Msa1349690 | AT2G37170.1 | 72.692 | 260 | 64 | 3 | 27 | 280 | 12 | 270 | 1.16e-134 | 382 |
| Msa1349690 | AT4G35100.1 | 71.483 | 263 | 74 | 1 | 23 | 285 | 9 | 270 | 1.80e-134 | 382 |
| Msa1349690 | AT4G35100.2 | 71.483 | 263 | 74 | 1 | 23 | 285 | 9 | 270 | 1.80e-134 | 382 |
| Msa1349690 | AT3G53420.1 | 72.692 | 260 | 64 | 2 | 27 | 280 | 14 | 272 | 2.18e-134 | 382 |
| Msa1349690 | AT3G53420.2 | 72.692 | 260 | 64 | 2 | 27 | 280 | 14 | 272 | 2.18e-134 | 382 |
| Msa1349690 | AT3G54820.1 | 68.000 | 275 | 81 | 2 | 17 | 285 | 3 | 276 | 3.56e-134 | 381 |
| Msa1349690 | AT2G39010.1 | 68.364 | 275 | 80 | 2 | 17 | 285 | 3 | 276 | 2.83e-133 | 379 |
| Msa1349690 | AT2G16850.1 | 72.374 | 257 | 70 | 1 | 29 | 285 | 13 | 268 | 5.81e-133 | 378 |
| Msa1349690 | AT2G37180.1 | 71.538 | 260 | 67 | 3 | 27 | 280 | 12 | 270 | 1.15e-132 | 377 |
| Msa1349690 | AT5G60660.1 | 70.455 | 264 | 71 | 2 | 28 | 285 | 15 | 277 | 2.20e-132 | 377 |
| Msa1349690 | AT4G00430.2 | 83.019 | 212 | 35 | 1 | 3 | 214 | 4 | 214 | 2.97e-126 | 358 |
| Msa1349690 | AT2G39010.2 | 64.500 | 200 | 64 | 2 | 17 | 210 | 3 | 201 | 8.26e-85 | 254 |
| Msa1349690 | AT5G47450.1 | 37.872 | 235 | 131 | 6 | 43 | 274 | 10 | 232 | 4.78e-31 | 116 |
| Msa1349690 | AT1G73190.1 | 36.066 | 244 | 127 | 8 | 52 | 282 | 24 | 251 | 5.48e-31 | 117 |
| Msa1349690 | AT4G01470.1 | 34.711 | 242 | 139 | 6 | 41 | 277 | 10 | 237 | 1.25e-30 | 115 |
| Msa1349690 | AT3G16240.1 | 36.364 | 231 | 132 | 5 | 47 | 274 | 14 | 232 | 1.67e-30 | 115 |
| Msa1349690 | AT1G17810.1 | 36.170 | 235 | 130 | 5 | 52 | 278 | 24 | 246 | 5.37e-30 | 114 |
| Msa1349690 | AT2G36830.1 | 34.286 | 245 | 134 | 9 | 41 | 276 | 10 | 236 | 5.65e-28 | 108 |
| Msa1349690 | AT3G26520.1 | 33.188 | 229 | 138 | 5 | 52 | 277 | 22 | 238 | 1.32e-27 | 107 |
| Msa1349690 | AT4G17340.1 | 36.596 | 235 | 134 | 6 | 43 | 274 | 10 | 232 | 5.15e-27 | 106 |
| Msa1349690 | AT3G47440.1 | 32.759 | 232 | 136 | 6 | 52 | 278 | 23 | 239 | 4.43e-25 | 101 |
| Msa1349690 | AT2G25810.1 | 34.335 | 233 | 136 | 8 | 52 | 282 | 19 | 236 | 9.35e-25 | 100 |
| Msa1349690 | AT4G19030.1 | 29.643 | 280 | 171 | 9 | 3 | 277 | 13 | 271 | 1.44e-19 | 87.0 |
| Msa1349690 | AT1G31885.1 | 32.000 | 225 | 140 | 7 | 45 | 267 | 36 | 249 | 5.61e-19 | 85.5 |
| Msa1349690 | AT4G18910.1 | 28.512 | 242 | 162 | 6 | 38 | 277 | 36 | 268 | 6.75e-17 | 79.3 |
| Msa1349690 | AT5G37820.1 | 28.111 | 217 | 130 | 7 | 55 | 266 | 46 | 241 | 9.12e-17 | 79.0 |
| Msa1349690 | AT5G37820.2 | 28.111 | 217 | 130 | 7 | 55 | 266 | 82 | 277 | 1.43e-16 | 79.0 |
| Msa1349690 | AT2G34390.1 | 26.119 | 268 | 168 | 9 | 16 | 277 | 20 | 263 | 6.10e-16 | 76.6 |
| Msa1349690 | AT1G31885.2 | 31.892 | 185 | 116 | 5 | 85 | 267 | 19 | 195 | 9.28e-16 | 75.9 |
| Msa1349690 | AT2G34390.2 | 27.511 | 229 | 144 | 8 | 55 | 277 | 9 | 221 | 4.24e-14 | 70.9 |
| Msa1349690 | AT3G06100.1 | 29.707 | 239 | 140 | 8 | 52 | 286 | 46 | 260 | 1.27e-13 | 69.7 |
| Msa1349690 | AT3G06100.2 | 29.661 | 236 | 138 | 8 | 55 | 286 | 1 | 212 | 3.31e-13 | 68.2 |
| Msa1349690 | AT4G10380.1 | 26.316 | 266 | 160 | 9 | 20 | 267 | 29 | 276 | 5.81e-13 | 68.2 |
| Msa1349690 | AT1G80760.1 | 29.004 | 231 | 143 | 8 | 49 | 277 | 77 | 288 | 9.61e-13 | 67.8 |
| Msa1349690 | AT5G37810.1 | 23.789 | 227 | 149 | 6 | 55 | 277 | 46 | 252 | 2.07e-12 | 66.6 |
Find 83 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAATTGCTTGGGCTTT+TGG | 0.161774 | tig0010967:-109297 | Msa1349690:CDS |
| TATTGCACTGCTGGAATTTC+AGG | 0.165208 | tig0010967:-109252 | Msa1349690:intron |
| TAATTTATATAGTGGGAATT+TGG | 0.202728 | tig0010967:+109667 | None:intergenic |
| TCATTGTTTATTTGCTTTGC+TGG | 0.234108 | tig0010967:+109705 | None:intergenic |
| CTTCTGAGTTCTGTCTTTGA+TGG | 0.262971 | tig0010967:+109622 | None:intergenic |
| TTGGCTACAATTCCCATTAC+TGG | 0.294571 | tig0010967:-108337 | Msa1349690:CDS |
| TTCTGGGTTGGACCTTTCAT+TGG | 0.308099 | tig0010967:-108134 | Msa1349690:CDS |
| GCCCTTGTCTATTGCACTGC+TGG | 0.332113 | tig0010967:-109261 | Msa1349690:CDS |
| ACCAACAGAAGCACACTTAG+AGG | 0.357180 | tig0010967:+109323 | None:intergenic |
| AGTGGTTATAATTTATATAG+TGG | 0.360443 | tig0010967:+109659 | None:intergenic |
| ATGGAAGTTTATAATATTAG+TGG | 0.365641 | tig0010967:+109641 | None:intergenic |
| TGTGCTTCTGTTGGTATTCA+AGG | 0.382436 | tig0010967:-109315 | Msa1349690:CDS |
| GGAGAGGGAGGAAGATGTTA+AGG | 0.389962 | tig0010967:-109556 | Msa1349690:CDS |
| GATCCGAGCAATTCCTTTCA+AGG | 0.393867 | tig0010967:-108078 | Msa1349690:CDS |
| TTGGTATTCAAGGAATTGCT+TGG | 0.400234 | tig0010967:-109305 | Msa1349690:CDS |
| ATACATATGAATATATGATT+TGG | 0.400235 | tig0010967:+107981 | None:intergenic |
| GCTCGTTATGAGTTGTATAA+AGG | 0.401946 | tig0010967:-108705 | Msa1349690:CDS |
| ACAATTCCCATTACTGGAAC+TGG | 0.407279 | tig0010967:-108331 | Msa1349690:CDS |
| GAATTGCTCGGATCACTATC+TGG | 0.408932 | tig0010967:+108087 | None:intergenic |
| ATGGTCTCTGTTGTATATTA+TGG | 0.412666 | tig0010967:+108279 | None:intergenic |
| AGAGTCTCTTGCATTTCTCT+TGG | 0.418783 | tig0010967:+108578 | None:intergenic |
| AGGGAGGAAGATGTTAAGGT+TGG | 0.422571 | tig0010967:-109552 | Msa1349690:CDS |
| TGCAAGAGACTCTCACGTTC+CGG | 0.436085 | tig0010967:-108568 | Msa1349690:intron |
| TGGTATTCAAGGAATTGCTT+GGG | 0.437803 | tig0010967:-109304 | Msa1349690:CDS |
| TACACCAAGGGTGATGGTCT+TGG | 0.441240 | tig0010967:-108657 | Msa1349690:CDS |
| CTTGGAGCTATCTGTGGTGC+TGG | 0.453990 | tig0010967:-108753 | Msa1349690:CDS |
| TTCTCAGAAAAGAATGCATT+GGG | 0.454430 | tig0010967:-109519 | Msa1349690:CDS |
| AATTACTCCCTTGCCTTGAA+AGG | 0.455988 | tig0010967:+108065 | None:intergenic |
| CCAGCACCTTTGTTTGAGCC+AGG | 0.466057 | tig0010967:-109453 | Msa1349690:CDS |
| TTAATGCCAGTTCCAGTAAT+GGG | 0.469401 | tig0010967:+108325 | None:intergenic |
| GTGGTTATAATTTATATAGT+GGG | 0.471781 | tig0010967:+109660 | None:intergenic |
| GCTTTGCTGGCTAATAATAA+CGG | 0.473041 | tig0010967:+109718 | None:intergenic |
| ATAAATCCAGCGGTGACATT+CGG | 0.475431 | tig0010967:-108837 | Msa1349690:CDS |
| CCCTCTAAGTGTGCTTCTGT+TGG | 0.477771 | tig0010967:-109324 | Msa1349690:CDS |
| TACATAATAATGCAGTGTCT+TGG | 0.479630 | tig0010967:-108771 | Msa1349690:CDS |
| GACCATGACTTCAACTCTCC+TGG | 0.486464 | tig0010967:+109435 | None:intergenic |
| AGCACACATGCCGATGATGA+TGG | 0.492805 | tig0010967:+108039 | None:intergenic |
| AACTCTCCTGGCTCAAACAA+AGG | 0.498554 | tig0010967:+109447 | None:intergenic |
| CATCACTGTCTTAACTGTGA+TGG | 0.500492 | tig0010967:-109361 | Msa1349690:CDS |
| GTTCTCAGAAAAGAATGCAT+TGG | 0.502108 | tig0010967:-109520 | Msa1349690:CDS |
| GGTCTTGGAGCTGAGATTGT+TGG | 0.502760 | tig0010967:-108642 | Msa1349690:CDS |
| CCTGGCTCAAACAAAGGTGC+TGG | 0.505994 | tig0010967:+109453 | None:intergenic |
| TGCATTTCTCTTGGCATCAG+TGG | 0.515764 | tig0010967:+108587 | None:intergenic |
| TAACTGTGATGGGTGTGAAT+AGG | 0.515829 | tig0010967:-109350 | Msa1349690:CDS |
| GAAAAGAATGCATTGGGCAC+AGG | 0.516964 | tig0010967:-109513 | Msa1349690:CDS |
| ATTAACCCAGCTAGGAGTCT+TGG | 0.521008 | tig0010967:-108307 | Msa1349690:CDS |
| TATACAACAGAGACCATGCT+TGG | 0.521813 | tig0010967:-108273 | Msa1349690:CDS |
| AGCTCCAAGACCATCACCCT+TGG | 0.522666 | tig0010967:+108653 | None:intergenic |
| AGCAATTCCTTTCAAGGCAA+GGG | 0.527223 | tig0010967:-108072 | Msa1349690:CDS |
| GAGTGATAGCAAGGACTACA+AGG | 0.528511 | tig0010967:-109484 | Msa1349690:CDS |
| GCAGCACCAAGACTCCTAGC+TGG | 0.528907 | tig0010967:+108301 | None:intergenic |
| CCATCACCCTTGGTGTAACC+AGG | 0.529590 | tig0010967:+108663 | None:intergenic |
| CAGTTAAGACAGTGATGTAA+AGG | 0.533154 | tig0010967:+109367 | None:intergenic |
| TTGCCTTGAAAGGAATTGCT+CGG | 0.539077 | tig0010967:+108075 | None:intergenic |
| AACAAACCGAATGTCACCGC+TGG | 0.543714 | tig0010967:+108831 | None:intergenic |
| ATCACTGTCTTAACTGTGAT+GGG | 0.546772 | tig0010967:-109360 | Msa1349690:CDS |
| CGTGAACTGAACACATTGAA+TGG | 0.548268 | tig0010967:-107919 | Msa1349690:three_prime_UTR |
| GCAAGTGCAGCTCCAATGAA+AGG | 0.549715 | tig0010967:+108122 | None:intergenic |
| AGTAATTAATCCATCATCAT+CGG | 0.554525 | tig0010967:-108049 | Msa1349690:exon |
| GGAGCAAATGTTGTGAATCC+TGG | 0.560797 | tig0010967:-108681 | Msa1349690:CDS |
| AGGAGCTCAGAGTGATAGCA+AGG | 0.561366 | tig0010967:-109493 | Msa1349690:CDS |
| GGCTCAAACAAAGGTGCTGG+TGG | 0.561806 | tig0010967:+109456 | None:intergenic |
| GTTAATGCCAGTTCCAGTAA+TGG | 0.566105 | tig0010967:+108324 | None:intergenic |
| CCTGGTTACACCAAGGGTGA+TGG | 0.571890 | tig0010967:-108663 | Msa1349690:CDS |
| GAGCAATTCCTTTCAAGGCA+AGG | 0.588614 | tig0010967:-108073 | Msa1349690:CDS |
| CGTTATGAGTTGTATAAAGG+TGG | 0.591045 | tig0010967:-108702 | Msa1349690:CDS |
| CAGTGTCTTGGAGCTATCTG+TGG | 0.593126 | tig0010967:-108759 | Msa1349690:CDS |
| ACAGCAAACCCAATTGGAAG+AGG | 0.593192 | tig0010967:+108373 | None:intergenic |
| CAGCACCAAGACTCCTAGCT+GGG | 0.594486 | tig0010967:+108302 | None:intergenic |
| GTAGAATACTGCTCTTGTCA+AGG | 0.594791 | tig0010967:+108791 | None:intergenic |
| ATACAACAGAGACCATGCTT+GGG | 0.595986 | tig0010967:-108272 | Msa1349690:CDS |
| AGCCAGGAGAGTTGAAGTCA+TGG | 0.598254 | tig0010967:-109437 | Msa1349690:CDS |
| TTCCAGCAGTGCAATAGACA+AGG | 0.608111 | tig0010967:+109259 | None:intergenic |
| TGTGGTGCTGGTGTAGTGAA+AGG | 0.611215 | tig0010967:-108741 | Msa1349690:CDS |
| CCAACAGAAGCACACTTAGA+GGG | 0.621914 | tig0010967:+109324 | None:intergenic |
| ATACATGGTCATCCCAAGCA+TGG | 0.639779 | tig0010967:+108260 | None:intergenic |
| GAACTGGCATTAACCCAGCT+AGG | 0.641090 | tig0010967:-108315 | Msa1349690:CDS |
| ATTGAATGGTCTGTGGAGTG+TGG | 0.650898 | tig0010967:-107905 | Msa1349690:three_prime_UTR |
| TCCAGCAGTGCAATAGACAA+GGG | 0.662213 | tig0010967:+109260 | None:intergenic |
| GTGAATCCTGGTTACACCAA+GGG | 0.663817 | tig0010967:-108669 | Msa1349690:CDS |
| TGAACACATTGAATGGTCTG+TGG | 0.671527 | tig0010967:-107912 | Msa1349690:three_prime_UTR |
| AGGTGGGCACATAAATCCAG+CGG | 0.718916 | tig0010967:-108847 | Msa1349690:CDS |
| TGTGAATCCTGGTTACACCA+AGG | 0.762851 | tig0010967:-108670 | Msa1349690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTACTTTTTTTCTTTT+AGG | + | tig0010967:107822-107841 | None:intergenic | 15.0% |
| !!! | TATTTAATGTTTGAATTTTG+TGG | - | tig0010967:109389-109408 | Msa1349690:CDS | 15.0% |
| !! | ATACATATGAATATATGATT+TGG | + | tig0010967:109586-109605 | None:intergenic | 15.0% |
| !!! | AACTTTACTTTTTTTCTTTT+AGG | + | tig0010967:107822-107841 | None:intergenic | 15.0% |
| !!! | TATTTAATGTTTGAATTTTG+TGG | - | tig0010967:109389-109408 | Msa1349690:CDS | 15.0% |
| !! | ATACATATGAATATATGATT+TGG | + | tig0010967:109586-109605 | None:intergenic | 15.0% |
| !!! | TAATTTATATAGTGGGAATT+TGG | + | tig0010967:107900-107919 | None:intergenic | 20.0% |
| !! | GTGGTTATAATTTATATAGT+GGG | + | tig0010967:107907-107926 | None:intergenic | 20.0% |
| !! | AGTGGTTATAATTTATATAG+TGG | + | tig0010967:107908-107927 | None:intergenic | 20.0% |
| !! | ATGGAAGTTTATAATATTAG+TGG | + | tig0010967:107926-107945 | None:intergenic | 20.0% |
| !! | AAAGAGAAAGAAAAAAAACA+TGG | - | tig0010967:107987-108006 | Msa1349690:three_prime_UTR | 20.0% |
| !! | AGATTAATATATAAGATGTG+AGG | - | tig0010967:108607-108626 | Msa1349690:CDS | 20.0% |
| !! | GATTAATATATAAGATGTGA+GGG | - | tig0010967:108608-108627 | Msa1349690:CDS | 20.0% |
| !!! | ATGTTTGTATTTGTAGATTT+TGG | - | tig0010967:109166-109185 | Msa1349690:intron | 20.0% |
| !! | CAGAACAAAAAATAAATTGA+AGG | + | tig0010967:109358-109377 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTTGTGTCTATTT+TGG | - | tig0010967:109560-109579 | Msa1349690:CDS | 20.0% |
| !!! | TAATTTATATAGTGGGAATT+TGG | + | tig0010967:107900-107919 | None:intergenic | 20.0% |
| !! | GTGGTTATAATTTATATAGT+GGG | + | tig0010967:107907-107926 | None:intergenic | 20.0% |
| !! | AGTGGTTATAATTTATATAG+TGG | + | tig0010967:107908-107927 | None:intergenic | 20.0% |
| !! | ATGGAAGTTTATAATATTAG+TGG | + | tig0010967:107926-107945 | None:intergenic | 20.0% |
| !! | AAAGAGAAAGAAAAAAAACA+TGG | - | tig0010967:107987-108006 | Msa1349690:three_prime_UTR | 20.0% |
| !! | AGATTAATATATAAGATGTG+AGG | - | tig0010967:108607-108626 | Msa1349690:CDS | 20.0% |
| !! | GATTAATATATAAGATGTGA+GGG | - | tig0010967:108608-108627 | Msa1349690:CDS | 20.0% |
| !!! | ATGTTTGTATTTGTAGATTT+TGG | - | tig0010967:109166-109185 | Msa1349690:intron | 20.0% |
| !! | CAGAACAAAAAATAAATTGA+AGG | + | tig0010967:109358-109377 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTTGTGTCTATTT+TGG | - | tig0010967:109560-109579 | Msa1349690:CDS | 20.0% |
| ! | AAAGAAAAAAAACATGGAGA+GGG | - | tig0010967:107993-108012 | Msa1349690:three_prime_UTR | 25.0% |
| !! | AAGTCTTTAATCTGAAATGT+TGG | - | tig0010967:108484-108503 | Msa1349690:intron | 25.0% |
| !! | TTTAATCTGAAATGTTGGTT+TGG | - | tig0010967:108489-108508 | Msa1349690:intron | 25.0% |
| !!! | AAATTAAACAGTGGATTTTC+TGG | - | tig0010967:109413-109432 | Msa1349690:CDS | 25.0% |
| !!! | AATTAAACAGTGGATTTTCT+GGG | - | tig0010967:109414-109433 | Msa1349690:CDS | 25.0% |
| ! | AGTAATTAATCCATCATCAT+CGG | - | tig0010967:109515-109534 | Msa1349690:CDS | 25.0% |
| ! | AAGAAAAACTCAAAAGAACT+AGG | + | tig0010967:109725-109744 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAAACATGGAGA+GGG | - | tig0010967:107993-108012 | Msa1349690:three_prime_UTR | 25.0% |
| !! | AAGTCTTTAATCTGAAATGT+TGG | - | tig0010967:108484-108503 | Msa1349690:intron | 25.0% |
| !! | TTTAATCTGAAATGTTGGTT+TGG | - | tig0010967:108489-108508 | Msa1349690:intron | 25.0% |
| !!! | AAATTAAACAGTGGATTTTC+TGG | - | tig0010967:109413-109432 | Msa1349690:CDS | 25.0% |
| !!! | AATTAAACAGTGGATTTTCT+GGG | - | tig0010967:109414-109433 | Msa1349690:CDS | 25.0% |
| ! | AGTAATTAATCCATCATCAT+CGG | - | tig0010967:109515-109534 | Msa1349690:CDS | 25.0% |
| ! | AAGAAAAACTCAAAAGAACT+AGG | + | tig0010967:109725-109744 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTAGGATAGAGTG+TGG | + | tig0010967:107811-107830 | None:intergenic | 30.0% |
| TCATTGTTTATTTGCTTTGC+TGG | + | tig0010967:107862-107881 | None:intergenic | 30.0% | |
| GAAAGAAAAAAAACATGGAG+AGG | - | tig0010967:107992-108011 | Msa1349690:three_prime_UTR | 30.0% | |
| TTCTCAGAAAAGAATGCATT+GGG | - | tig0010967:108045-108064 | Msa1349690:three_prime_UTR | 30.0% | |
| GTCAGTATTAGTGTCATATT+CGG | + | tig0010967:108386-108405 | None:intergenic | 30.0% | |
| TTTCAGATTAAAGACTTGTC+CGG | + | tig0010967:108481-108500 | None:intergenic | 30.0% | |
| TTTGAACAAAACTAACGAGA+TGG | - | tig0010967:108686-108705 | Msa1349690:CDS | 30.0% | |
| TACATAATAATGCAGTGTCT+TGG | - | tig0010967:108793-108812 | Msa1349690:CDS | 30.0% | |
| TGAAATTCATTTACACGTAC+CGG | + | tig0010967:109018-109037 | None:intergenic | 30.0% | |
| ATGGTCTCTGTTGTATATTA+TGG | + | tig0010967:109288-109307 | None:intergenic | 30.0% | |
| ! | TTTTGTGGCAAATTAAACAG+TGG | - | tig0010967:109404-109423 | Msa1349690:CDS | 30.0% |
| !!! | TTTTCTTTTAGGATAGAGTG+TGG | + | tig0010967:107811-107830 | None:intergenic | 30.0% |
| TCATTGTTTATTTGCTTTGC+TGG | + | tig0010967:107862-107881 | None:intergenic | 30.0% | |
| GAAAGAAAAAAAACATGGAG+AGG | - | tig0010967:107992-108011 | Msa1349690:three_prime_UTR | 30.0% | |
| TTCTCAGAAAAGAATGCATT+GGG | - | tig0010967:108045-108064 | Msa1349690:three_prime_UTR | 30.0% | |
| GTCAGTATTAGTGTCATATT+CGG | + | tig0010967:108386-108405 | None:intergenic | 30.0% | |
| TTTCAGATTAAAGACTTGTC+CGG | + | tig0010967:108481-108500 | None:intergenic | 30.0% | |
| TTTGAACAAAACTAACGAGA+TGG | - | tig0010967:108686-108705 | Msa1349690:CDS | 30.0% | |
| TACATAATAATGCAGTGTCT+TGG | - | tig0010967:108793-108812 | Msa1349690:CDS | 30.0% | |
| TGAAATTCATTTACACGTAC+CGG | + | tig0010967:109018-109037 | None:intergenic | 30.0% | |
| ATGGTCTCTGTTGTATATTA+TGG | + | tig0010967:109288-109307 | None:intergenic | 30.0% | |
| ! | TTTTGTGGCAAATTAAACAG+TGG | - | tig0010967:109404-109423 | Msa1349690:CDS | 30.0% |
| ! | GCTTTGCTGGCTAATAATAA+CGG | + | tig0010967:107849-107868 | None:intergenic | 35.0% |
| GTTCTCAGAAAAGAATGCAT+TGG | - | tig0010967:108044-108063 | Msa1349690:three_prime_UTR | 35.0% | |
| !! | TCATGGTCATTTTATAGAGC+TGG | - | tig0010967:108144-108163 | Msa1349690:intron | 35.0% |
| !! | CATGGTCATTTTATAGAGCT+GGG | - | tig0010967:108145-108164 | Msa1349690:intron | 35.0% |
| CAGTTAAGACAGTGATGTAA+AGG | + | tig0010967:108200-108219 | None:intergenic | 35.0% | |
| ATCACTGTCTTAACTGTGAT+GGG | - | tig0010967:108204-108223 | Msa1349690:intron | 35.0% | |
| TTGGTATTCAAGGAATTGCT+TGG | - | tig0010967:108259-108278 | Msa1349690:intron | 35.0% | |
| TGGTATTCAAGGAATTGCTT+GGG | - | tig0010967:108260-108279 | Msa1349690:intron | 35.0% | |
| TCAATGTGTCACATAAACAC+CGG | - | tig0010967:108459-108478 | Msa1349690:intron | 35.0% | |
| AAGATGTGAGGGACTAAATT+AGG | - | tig0010967:108619-108638 | Msa1349690:CDS | 35.0% | |
| AGATGTGAGGGACTAAATTA+GGG | - | tig0010967:108620-108639 | Msa1349690:CDS | 35.0% | |
| AACAAAACTAACGAGATGGT+TGG | - | tig0010967:108690-108709 | Msa1349690:CDS | 35.0% | |
| ACAAAACTAACGAGATGGTT+GGG | - | tig0010967:108691-108710 | Msa1349690:CDS | 35.0% | |
| GCTCGTTATGAGTTGTATAA+AGG | - | tig0010967:108859-108878 | Msa1349690:intron | 35.0% | |
| CGTTATGAGTTGTATAAAGG+TGG | - | tig0010967:108862-108881 | Msa1349690:intron | 35.0% | |
| !! | TGCTTCATTTTTGTCGACTA+AGG | - | tig0010967:109130-109149 | Msa1349690:intron | 35.0% |
| AAAAACACAGCAAACCCAAT+TGG | + | tig0010967:109200-109219 | None:intergenic | 35.0% | |
| !!! | AATTGGGTTTGCTGTGTTTT+TGG | - | tig0010967:109199-109218 | Msa1349690:intron | 35.0% |
| TTAATGCCAGTTCCAGTAAT+GGG | + | tig0010967:109242-109261 | None:intergenic | 35.0% | |
| ACAAAGTGAAAGGACATACA+TGG | + | tig0010967:109322-109341 | None:intergenic | 35.0% | |
| CAACAGCATAACAAAGTGAA+AGG | + | tig0010967:109332-109351 | None:intergenic | 35.0% | |
| ! | TTCACTTTGTTATGCTGTTG+TGG | - | tig0010967:109332-109351 | Msa1349690:CDS | 35.0% |
| ! | GCTTTGCTGGCTAATAATAA+CGG | + | tig0010967:107849-107868 | None:intergenic | 35.0% |
| GTTCTCAGAAAAGAATGCAT+TGG | - | tig0010967:108044-108063 | Msa1349690:three_prime_UTR | 35.0% | |
| !! | TCATGGTCATTTTATAGAGC+TGG | - | tig0010967:108144-108163 | Msa1349690:intron | 35.0% |
| !! | CATGGTCATTTTATAGAGCT+GGG | - | tig0010967:108145-108164 | Msa1349690:intron | 35.0% |
| CAGTTAAGACAGTGATGTAA+AGG | + | tig0010967:108200-108219 | None:intergenic | 35.0% | |
| ATCACTGTCTTAACTGTGAT+GGG | - | tig0010967:108204-108223 | Msa1349690:intron | 35.0% | |
| TTGGTATTCAAGGAATTGCT+TGG | - | tig0010967:108259-108278 | Msa1349690:intron | 35.0% | |
| TGGTATTCAAGGAATTGCTT+GGG | - | tig0010967:108260-108279 | Msa1349690:intron | 35.0% | |
| TCAATGTGTCACATAAACAC+CGG | - | tig0010967:108459-108478 | Msa1349690:intron | 35.0% | |
| AAGATGTGAGGGACTAAATT+AGG | - | tig0010967:108619-108638 | Msa1349690:CDS | 35.0% | |
| AGATGTGAGGGACTAAATTA+GGG | - | tig0010967:108620-108639 | Msa1349690:CDS | 35.0% | |
| AACAAAACTAACGAGATGGT+TGG | - | tig0010967:108690-108709 | Msa1349690:CDS | 35.0% | |
| ACAAAACTAACGAGATGGTT+GGG | - | tig0010967:108691-108710 | Msa1349690:CDS | 35.0% | |
| GCTCGTTATGAGTTGTATAA+AGG | - | tig0010967:108859-108878 | Msa1349690:intron | 35.0% | |
| CGTTATGAGTTGTATAAAGG+TGG | - | tig0010967:108862-108881 | Msa1349690:intron | 35.0% | |
| !! | TGCTTCATTTTTGTCGACTA+AGG | - | tig0010967:109130-109149 | Msa1349690:intron | 35.0% |
| AAAAACACAGCAAACCCAAT+TGG | + | tig0010967:109200-109219 | None:intergenic | 35.0% | |
| !!! | AATTGGGTTTGCTGTGTTTT+TGG | - | tig0010967:109199-109218 | Msa1349690:intron | 35.0% |
| TTAATGCCAGTTCCAGTAAT+GGG | + | tig0010967:109242-109261 | None:intergenic | 35.0% | |
| ACAAAGTGAAAGGACATACA+TGG | + | tig0010967:109322-109341 | None:intergenic | 35.0% | |
| CAACAGCATAACAAAGTGAA+AGG | + | tig0010967:109332-109351 | None:intergenic | 35.0% | |
| ! | TTCACTTTGTTATGCTGTTG+TGG | - | tig0010967:109332-109351 | Msa1349690:CDS | 35.0% |
| CTTCTGAGTTCTGTCTTTGA+TGG | + | tig0010967:107945-107964 | None:intergenic | 40.0% | |
| GAAAAAAAACATGGAGAGGG+AGG | - | tig0010967:107996-108015 | Msa1349690:three_prime_UTR | 40.0% | |
| CATCACTGTCTTAACTGTGA+TGG | - | tig0010967:108203-108222 | Msa1349690:intron | 40.0% | |
| !! | TAACTGTGATGGGTGTGAAT+AGG | - | tig0010967:108214-108233 | Msa1349690:intron | 40.0% |
| TGTGCTTCTGTTGGTATTCA+AGG | - | tig0010967:108249-108268 | Msa1349690:intron | 40.0% | |
| TATTGCACTGCTGGAATTTC+AGG | - | tig0010967:108312-108331 | Msa1349690:CDS | 40.0% | |
| GCATCACCATCTTGAAATTG+TGG | + | tig0010967:108649-108668 | None:intergenic | 40.0% | |
| ATAAATCCAGCGGTGACATT+CGG | - | tig0010967:108727-108746 | Msa1349690:CDS | 40.0% | |
| !! | GGTGACATTCGGTTTGTTTT+TGG | - | tig0010967:108738-108757 | Msa1349690:CDS | 40.0% |
| !!! | CATTCGGTTTGTTTTTGGCT+AGG | - | tig0010967:108743-108762 | Msa1349690:CDS | 40.0% |
| GTAGAATACTGCTCTTGTCA+AGG | + | tig0010967:108776-108795 | None:intergenic | 40.0% | |
| ! | TGGTGTAGTGAAAGGTTTTG+AGG | - | tig0010967:108831-108850 | Msa1349690:CDS | 40.0% |
| !! | GGTGTAGTGAAAGGTTTTGA+GGG | - | tig0010967:108832-108851 | Msa1349690:CDS | 40.0% |
| AGAGTCTCTTGCATTTCTCT+TGG | + | tig0010967:108989-109008 | None:intergenic | 40.0% | |
| !! | ATTTTGGCACCTCTTCCAAT+TGG | - | tig0010967:109182-109201 | Msa1349690:intron | 40.0% |
| ! | TTTTGGCACCTCTTCCAATT+GGG | - | tig0010967:109183-109202 | Msa1349690:intron | 40.0% |
| !!! | TGCTGTGTTTTTGGTTCACT+TGG | - | tig0010967:109208-109227 | Msa1349690:intron | 40.0% |
| TTGGCTACAATTCCCATTAC+TGG | - | tig0010967:109227-109246 | Msa1349690:intron | 40.0% | |
| ACAATTCCCATTACTGGAAC+TGG | - | tig0010967:109233-109252 | Msa1349690:intron | 40.0% | |
| GTTAATGCCAGTTCCAGTAA+TGG | + | tig0010967:109243-109262 | None:intergenic | 40.0% | |
| TATACAACAGAGACCATGCT+TGG | - | tig0010967:109291-109310 | Msa1349690:CDS | 40.0% | |
| ATACAACAGAGACCATGCTT+GGG | - | tig0010967:109292-109311 | Msa1349690:CDS | 40.0% | |
| !! | AAACAGTGGATTTTCTGGGT+TGG | - | tig0010967:109418-109437 | Msa1349690:CDS | 40.0% |
| TTGCCTTGAAAGGAATTGCT+CGG | + | tig0010967:109492-109511 | None:intergenic | 40.0% | |
| AGCAATTCCTTTCAAGGCAA+GGG | - | tig0010967:109492-109511 | Msa1349690:CDS | 40.0% | |
| AATTACTCCCTTGCCTTGAA+AGG | + | tig0010967:109502-109521 | None:intergenic | 40.0% | |
| CGTGAACTGAACACATTGAA+TGG | - | tig0010967:109645-109664 | Msa1349690:five_prime_UTR | 40.0% | |
| TGAACACATTGAATGGTCTG+TGG | - | tig0010967:109652-109671 | Msa1349690:five_prime_UTR | 40.0% | |
| CTTCTGAGTTCTGTCTTTGA+TGG | + | tig0010967:107945-107964 | None:intergenic | 40.0% | |
| GAAAAAAAACATGGAGAGGG+AGG | - | tig0010967:107996-108015 | Msa1349690:three_prime_UTR | 40.0% | |
| CATCACTGTCTTAACTGTGA+TGG | - | tig0010967:108203-108222 | Msa1349690:intron | 40.0% | |
| !! | TAACTGTGATGGGTGTGAAT+AGG | - | tig0010967:108214-108233 | Msa1349690:intron | 40.0% |
| TGTGCTTCTGTTGGTATTCA+AGG | - | tig0010967:108249-108268 | Msa1349690:intron | 40.0% | |
| TATTGCACTGCTGGAATTTC+AGG | - | tig0010967:108312-108331 | Msa1349690:CDS | 40.0% | |
| GCATCACCATCTTGAAATTG+TGG | + | tig0010967:108649-108668 | None:intergenic | 40.0% | |
| ATAAATCCAGCGGTGACATT+CGG | - | tig0010967:108727-108746 | Msa1349690:CDS | 40.0% | |
| !! | GGTGACATTCGGTTTGTTTT+TGG | - | tig0010967:108738-108757 | Msa1349690:CDS | 40.0% |
| !!! | CATTCGGTTTGTTTTTGGCT+AGG | - | tig0010967:108743-108762 | Msa1349690:CDS | 40.0% |
| GTAGAATACTGCTCTTGTCA+AGG | + | tig0010967:108776-108795 | None:intergenic | 40.0% | |
| ! | TGGTGTAGTGAAAGGTTTTG+AGG | - | tig0010967:108831-108850 | Msa1349690:CDS | 40.0% |
| !! | GGTGTAGTGAAAGGTTTTGA+GGG | - | tig0010967:108832-108851 | Msa1349690:CDS | 40.0% |
| AGAGTCTCTTGCATTTCTCT+TGG | + | tig0010967:108989-109008 | None:intergenic | 40.0% | |
| !! | ATTTTGGCACCTCTTCCAAT+TGG | - | tig0010967:109182-109201 | Msa1349690:intron | 40.0% |
| ! | TTTTGGCACCTCTTCCAATT+GGG | - | tig0010967:109183-109202 | Msa1349690:intron | 40.0% |
| !!! | TGCTGTGTTTTTGGTTCACT+TGG | - | tig0010967:109208-109227 | Msa1349690:intron | 40.0% |
| TTGGCTACAATTCCCATTAC+TGG | - | tig0010967:109227-109246 | Msa1349690:intron | 40.0% | |
| ACAATTCCCATTACTGGAAC+TGG | - | tig0010967:109233-109252 | Msa1349690:intron | 40.0% | |
| GTTAATGCCAGTTCCAGTAA+TGG | + | tig0010967:109243-109262 | None:intergenic | 40.0% | |
| TATACAACAGAGACCATGCT+TGG | - | tig0010967:109291-109310 | Msa1349690:CDS | 40.0% | |
| ATACAACAGAGACCATGCTT+GGG | - | tig0010967:109292-109311 | Msa1349690:CDS | 40.0% | |
| !! | AAACAGTGGATTTTCTGGGT+TGG | - | tig0010967:109418-109437 | Msa1349690:CDS | 40.0% |
| TTGCCTTGAAAGGAATTGCT+CGG | + | tig0010967:109492-109511 | None:intergenic | 40.0% | |
| AGCAATTCCTTTCAAGGCAA+GGG | - | tig0010967:109492-109511 | Msa1349690:CDS | 40.0% | |
| AATTACTCCCTTGCCTTGAA+AGG | + | tig0010967:109502-109521 | None:intergenic | 40.0% | |
| CGTGAACTGAACACATTGAA+TGG | - | tig0010967:109645-109664 | Msa1349690:five_prime_UTR | 40.0% | |
| TGAACACATTGAATGGTCTG+TGG | - | tig0010967:109652-109671 | Msa1349690:five_prime_UTR | 40.0% | |
| AGGGAGGAAGATGTTAAGGT+TGG | - | tig0010967:108012-108031 | Msa1349690:three_prime_UTR | 45.0% | |
| GAAAAGAATGCATTGGGCAC+AGG | - | tig0010967:108051-108070 | Msa1349690:exon | 45.0% | |
| GAGTGATAGCAAGGACTACA+AGG | - | tig0010967:108080-108099 | Msa1349690:CDS | 45.0% | |
| AACTCTCCTGGCTCAAACAA+AGG | + | tig0010967:108120-108139 | None:intergenic | 45.0% | |
| ! | CCAACAGAAGCACACTTAGA+GGG | + | tig0010967:108243-108262 | None:intergenic | 45.0% |
| ! | ACCAACAGAAGCACACTTAG+AGG | + | tig0010967:108244-108263 | None:intergenic | 45.0% |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | - | tig0010967:108267-108286 | Msa1349690:CDS | 45.0% |
| TCCAGCAGTGCAATAGACAA+GGG | + | tig0010967:108307-108326 | None:intergenic | 45.0% | |
| TTCCAGCAGTGCAATAGACA+AGG | + | tig0010967:108308-108327 | None:intergenic | 45.0% | |
| GGGACTCCACAATTTCAAGA+TGG | - | tig0010967:108640-108659 | Msa1349690:CDS | 45.0% | |
| GGAGCAAATGTTGTGAATCC+TGG | - | tig0010967:108883-108902 | Msa1349690:intron | 45.0% | |
| TGTGAATCCTGGTTACACCA+AGG | - | tig0010967:108894-108913 | Msa1349690:intron | 45.0% | |
| GTGAATCCTGGTTACACCAA+GGG | - | tig0010967:108895-108914 | Msa1349690:intron | 45.0% | |
| TGCATTTCTCTTGGCATCAG+TGG | + | tig0010967:108980-108999 | None:intergenic | 45.0% | |
| ACAGCAAACCCAATTGGAAG+AGG | + | tig0010967:109194-109213 | None:intergenic | 45.0% | |
| ATTAACCCAGCTAGGAGTCT+TGG | - | tig0010967:109257-109276 | Msa1349690:CDS | 45.0% | |
| ATACATGGTCATCCCAAGCA+TGG | + | tig0010967:109307-109326 | None:intergenic | 45.0% | |
| ! | TTCTGGGTTGGACCTTTCAT+TGG | - | tig0010967:109430-109449 | Msa1349690:CDS | 45.0% |
| GAATTGCTCGGATCACTATC+TGG | + | tig0010967:109480-109499 | None:intergenic | 45.0% | |
| GATCCGAGCAATTCCTTTCA+AGG | - | tig0010967:109486-109505 | Msa1349690:CDS | 45.0% | |
| GAGCAATTCCTTTCAAGGCA+AGG | - | tig0010967:109491-109510 | Msa1349690:CDS | 45.0% | |
| ATTGAATGGTCTGTGGAGTG+TGG | - | tig0010967:109659-109678 | Msa1349690:five_prime_UTR | 45.0% | |
| AGGGAGGAAGATGTTAAGGT+TGG | - | tig0010967:108012-108031 | Msa1349690:three_prime_UTR | 45.0% | |
| GAAAAGAATGCATTGGGCAC+AGG | - | tig0010967:108051-108070 | Msa1349690:exon | 45.0% | |
| GAGTGATAGCAAGGACTACA+AGG | - | tig0010967:108080-108099 | Msa1349690:CDS | 45.0% | |
| AACTCTCCTGGCTCAAACAA+AGG | + | tig0010967:108120-108139 | None:intergenic | 45.0% | |
| ! | CCAACAGAAGCACACTTAGA+GGG | + | tig0010967:108243-108262 | None:intergenic | 45.0% |
| ! | ACCAACAGAAGCACACTTAG+AGG | + | tig0010967:108244-108263 | None:intergenic | 45.0% |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | - | tig0010967:108267-108286 | Msa1349690:CDS | 45.0% |
| TCCAGCAGTGCAATAGACAA+GGG | + | tig0010967:108307-108326 | None:intergenic | 45.0% | |
| TTCCAGCAGTGCAATAGACA+AGG | + | tig0010967:108308-108327 | None:intergenic | 45.0% | |
| GGGACTCCACAATTTCAAGA+TGG | - | tig0010967:108640-108659 | Msa1349690:CDS | 45.0% | |
| GGAGCAAATGTTGTGAATCC+TGG | - | tig0010967:108883-108902 | Msa1349690:intron | 45.0% | |
| TGTGAATCCTGGTTACACCA+AGG | - | tig0010967:108894-108913 | Msa1349690:intron | 45.0% | |
| GTGAATCCTGGTTACACCAA+GGG | - | tig0010967:108895-108914 | Msa1349690:intron | 45.0% | |
| TGCATTTCTCTTGGCATCAG+TGG | + | tig0010967:108980-108999 | None:intergenic | 45.0% | |
| ACAGCAAACCCAATTGGAAG+AGG | + | tig0010967:109194-109213 | None:intergenic | 45.0% | |
| ATTAACCCAGCTAGGAGTCT+TGG | - | tig0010967:109257-109276 | Msa1349690:CDS | 45.0% | |
| ATACATGGTCATCCCAAGCA+TGG | + | tig0010967:109307-109326 | None:intergenic | 45.0% | |
| ! | TTCTGGGTTGGACCTTTCAT+TGG | - | tig0010967:109430-109449 | Msa1349690:CDS | 45.0% |
| GAATTGCTCGGATCACTATC+TGG | + | tig0010967:109480-109499 | None:intergenic | 45.0% | |
| GATCCGAGCAATTCCTTTCA+AGG | - | tig0010967:109486-109505 | Msa1349690:CDS | 45.0% | |
| GAGCAATTCCTTTCAAGGCA+AGG | - | tig0010967:109491-109510 | Msa1349690:CDS | 45.0% | |
| ATTGAATGGTCTGTGGAGTG+TGG | - | tig0010967:109659-109678 | Msa1349690:five_prime_UTR | 45.0% | |
| GGAGAGGGAGGAAGATGTTA+AGG | - | tig0010967:108008-108027 | Msa1349690:three_prime_UTR | 50.0% | |
| AGGAGCTCAGAGTGATAGCA+AGG | - | tig0010967:108071-108090 | Msa1349690:CDS | 50.0% | |
| AGCCAGGAGAGTTGAAGTCA+TGG | - | tig0010967:108127-108146 | Msa1349690:CDS | 50.0% | |
| GACCATGACTTCAACTCTCC+TGG | + | tig0010967:108132-108151 | None:intergenic | 50.0% | |
| CCCTCTAAGTGTGCTTCTGT+TGG | - | tig0010967:108240-108259 | Msa1349690:intron | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | - | tig0010967:108270-108289 | Msa1349690:CDS | 50.0% |
| CTAACGAGATGGTTGGGAAC+AGG | - | tig0010967:108697-108716 | Msa1349690:CDS | 50.0% | |
| AGGTGGGCACATAAATCCAG+CGG | - | tig0010967:108717-108736 | Msa1349690:CDS | 50.0% | |
| AACAAACCGAATGTCACCGC+TGG | + | tig0010967:108736-108755 | None:intergenic | 50.0% | |
| CAGTGTCTTGGAGCTATCTG+TGG | - | tig0010967:108805-108824 | Msa1349690:CDS | 50.0% | |
| !! | TGTGGTGCTGGTGTAGTGAA+AGG | - | tig0010967:108823-108842 | Msa1349690:CDS | 50.0% |
| ! | TACACCAAGGGTGATGGTCT+TGG | - | tig0010967:108907-108926 | Msa1349690:intron | 50.0% |
| GGTCTTGGAGCTGAGATTGT+TGG | - | tig0010967:108922-108941 | Msa1349690:intron | 50.0% | |
| TGCAAGAGACTCTCACGTTC+CGG | - | tig0010967:108996-109015 | Msa1349690:intron | 50.0% | |
| GAACTGGCATTAACCCAGCT+AGG | - | tig0010967:109249-109268 | Msa1349690:intron | 50.0% | |
| GCAAGTGCAGCTCCAATGAA+AGG | + | tig0010967:109445-109464 | None:intergenic | 50.0% | |
| AGCACACATGCCGATGATGA+TGG | + | tig0010967:109528-109547 | None:intergenic | 50.0% | |
| GGAGAGGGAGGAAGATGTTA+AGG | - | tig0010967:108008-108027 | Msa1349690:three_prime_UTR | 50.0% | |
| AGGAGCTCAGAGTGATAGCA+AGG | - | tig0010967:108071-108090 | Msa1349690:CDS | 50.0% | |
| AGCCAGGAGAGTTGAAGTCA+TGG | - | tig0010967:108127-108146 | Msa1349690:CDS | 50.0% | |
| GACCATGACTTCAACTCTCC+TGG | + | tig0010967:108132-108151 | None:intergenic | 50.0% | |
| CCCTCTAAGTGTGCTTCTGT+TGG | - | tig0010967:108240-108259 | Msa1349690:intron | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | - | tig0010967:108270-108289 | Msa1349690:CDS | 50.0% |
| CTAACGAGATGGTTGGGAAC+AGG | - | tig0010967:108697-108716 | Msa1349690:CDS | 50.0% | |
| AGGTGGGCACATAAATCCAG+CGG | - | tig0010967:108717-108736 | Msa1349690:CDS | 50.0% | |
| AACAAACCGAATGTCACCGC+TGG | + | tig0010967:108736-108755 | None:intergenic | 50.0% | |
| CAGTGTCTTGGAGCTATCTG+TGG | - | tig0010967:108805-108824 | Msa1349690:CDS | 50.0% | |
| !! | TGTGGTGCTGGTGTAGTGAA+AGG | - | tig0010967:108823-108842 | Msa1349690:CDS | 50.0% |
| ! | TACACCAAGGGTGATGGTCT+TGG | - | tig0010967:108907-108926 | Msa1349690:intron | 50.0% |
| GGTCTTGGAGCTGAGATTGT+TGG | - | tig0010967:108922-108941 | Msa1349690:intron | 50.0% | |
| TGCAAGAGACTCTCACGTTC+CGG | - | tig0010967:108996-109015 | Msa1349690:intron | 50.0% | |
| GAACTGGCATTAACCCAGCT+AGG | - | tig0010967:109249-109268 | Msa1349690:intron | 50.0% | |
| GCAAGTGCAGCTCCAATGAA+AGG | + | tig0010967:109445-109464 | None:intergenic | 50.0% | |
| AGCACACATGCCGATGATGA+TGG | + | tig0010967:109528-109547 | None:intergenic | 50.0% | |
| !! | GGCTCAAACAAAGGTGCTGG+TGG | + | tig0010967:108111-108130 | None:intergenic | 55.0% |
| ! | CCTGGCTCAAACAAAGGTGC+TGG | + | tig0010967:108114-108133 | None:intergenic | 55.0% |
| ! | CCAGCACCTTTGTTTGAGCC+AGG | - | tig0010967:108111-108130 | Msa1349690:CDS | 55.0% |
| GCCCTTGTCTATTGCACTGC+TGG | - | tig0010967:108303-108322 | Msa1349690:CDS | 55.0% | |
| ACGAGATGGTTGGGAACAGG+TGG | - | tig0010967:108700-108719 | Msa1349690:CDS | 55.0% | |
| CGAGATGGTTGGGAACAGGT+GGG | - | tig0010967:108701-108720 | Msa1349690:CDS | 55.0% | |
| CTTGGAGCTATCTGTGGTGC+TGG | - | tig0010967:108811-108830 | Msa1349690:CDS | 55.0% | |
| ! | CCATCACCCTTGGTGTAACC+AGG | + | tig0010967:108904-108923 | None:intergenic | 55.0% |
| CCTGGTTACACCAAGGGTGA+TGG | - | tig0010967:108901-108920 | Msa1349690:intron | 55.0% | |
| AGCTCCAAGACCATCACCCT+TGG | + | tig0010967:108914-108933 | None:intergenic | 55.0% | |
| CAGCACCAAGACTCCTAGCT+GGG | + | tig0010967:109265-109284 | None:intergenic | 55.0% | |
| !! | GGCTCAAACAAAGGTGCTGG+TGG | + | tig0010967:108111-108130 | None:intergenic | 55.0% |
| ! | CCTGGCTCAAACAAAGGTGC+TGG | + | tig0010967:108114-108133 | None:intergenic | 55.0% |
| ! | CCAGCACCTTTGTTTGAGCC+AGG | - | tig0010967:108111-108130 | Msa1349690:CDS | 55.0% |
| GCCCTTGTCTATTGCACTGC+TGG | - | tig0010967:108303-108322 | Msa1349690:CDS | 55.0% | |
| ACGAGATGGTTGGGAACAGG+TGG | - | tig0010967:108700-108719 | Msa1349690:CDS | 55.0% | |
| CGAGATGGTTGGGAACAGGT+GGG | - | tig0010967:108701-108720 | Msa1349690:CDS | 55.0% | |
| CTTGGAGCTATCTGTGGTGC+TGG | - | tig0010967:108811-108830 | Msa1349690:CDS | 55.0% | |
| ! | CCATCACCCTTGGTGTAACC+AGG | + | tig0010967:108904-108923 | None:intergenic | 55.0% |
| CCTGGTTACACCAAGGGTGA+TGG | - | tig0010967:108901-108920 | Msa1349690:intron | 55.0% | |
| AGCTCCAAGACCATCACCCT+TGG | + | tig0010967:108914-108933 | None:intergenic | 55.0% | |
| CAGCACCAAGACTCCTAGCT+GGG | + | tig0010967:109265-109284 | None:intergenic | 55.0% | |
| GCAGCACCAAGACTCCTAGC+TGG | + | tig0010967:109266-109285 | None:intergenic | 60.0% | |
| GCAGCACCAAGACTCCTAGC+TGG | + | tig0010967:109266-109285 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0010967 | gene | 107799 | 109787 | 107799 | ID=Msa1349690;Name=Msa1349690 |
| tig0010967 | mRNA | 107799 | 109787 | 107799 | ID=Msa1349690-mRNA-1;Parent=Msa1349690;Name=Msa1349690-mRNA-1;_AED=0.03;_eAED=0.03;_QI=207|1|1|1|1|1|4|268|287 |
| tig0010967 | exon | 107799 | 108162 | 107799 | ID=Msa1349690-mRNA-1:exon:7052;Parent=Msa1349690-mRNA-1 |
| tig0010967 | exon | 108264 | 108404 | 108264 | ID=Msa1349690-mRNA-1:exon:7051;Parent=Msa1349690-mRNA-1 |
| tig0010967 | exon | 108569 | 108867 | 108569 | ID=Msa1349690-mRNA-1:exon:7050;Parent=Msa1349690-mRNA-1 |
| tig0010967 | exon | 109253 | 109787 | 109253 | ID=Msa1349690-mRNA-1:exon:7049;Parent=Msa1349690-mRNA-1 |
| tig0010967 | five_prime_UTR | 109581 | 109787 | 109581 | ID=Msa1349690-mRNA-1:five_prime_utr;Parent=Msa1349690-mRNA-1 |
| tig0010967 | CDS | 109253 | 109580 | 109253 | ID=Msa1349690-mRNA-1:cds;Parent=Msa1349690-mRNA-1 |
| tig0010967 | CDS | 108569 | 108867 | 108569 | ID=Msa1349690-mRNA-1:cds;Parent=Msa1349690-mRNA-1 |
| tig0010967 | CDS | 108264 | 108404 | 108264 | ID=Msa1349690-mRNA-1:cds;Parent=Msa1349690-mRNA-1 |
| tig0010967 | CDS | 108067 | 108162 | 108067 | ID=Msa1349690-mRNA-1:cds;Parent=Msa1349690-mRNA-1 |
| tig0010967 | three_prime_UTR | 107799 | 108066 | 107799 | ID=Msa1349690-mRNA-1:three_prime_utr;Parent=Msa1349690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
