Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066580 | XP_003623906.3 | 91.688 | 397 | 21 | 1 | 1 | 385 | 86 | 482 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066580 | sp|Q6UW63|PLGT2_HUMAN | 25.731 | 342 | 220 | 11 | 27 | 347 | 152 | 480 | 1.34e-20 | 96.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066580 | Q2HRE8 | 91.688 | 397 | 21 | 1 | 1 | 385 | 1 | 397 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1027940 | Msa1066580 | 0.801605 | 8.323291e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066580 | MtrunA17_Chr7g0247251 | 91.688 | 397 | 21 | 1 | 1 | 385 | 1 | 397 | 0.0 | 759 |
| Msa1066580 | MtrunA17_Chr7g0247261 | 83.333 | 396 | 53 | 2 | 2 | 385 | 50 | 444 | 0.0 | 694 |
| Msa1066580 | MtrunA17_Chr8g0349241 | 63.185 | 383 | 127 | 2 | 14 | 384 | 88 | 468 | 0.0 | 540 |
| Msa1066580 | MtrunA17_Chr8g0349361 | 52.778 | 396 | 167 | 4 | 2 | 384 | 93 | 481 | 6.69e-159 | 456 |
| Msa1066580 | MtrunA17_Chr6g0471441 | 52.020 | 396 | 175 | 2 | 1 | 384 | 82 | 474 | 1.68e-157 | 452 |
| Msa1066580 | MtrunA17_Chr8g0349371 | 55.200 | 375 | 153 | 4 | 24 | 384 | 91 | 464 | 3.76e-155 | 446 |
| Msa1066580 | MtrunA17_Chr5g0397701 | 50.754 | 398 | 165 | 5 | 2 | 384 | 90 | 471 | 1.71e-151 | 437 |
| Msa1066580 | MtrunA17_Chr3g0104841 | 41.257 | 366 | 194 | 6 | 28 | 380 | 106 | 463 | 2.91e-102 | 310 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1066580 | AT5G23850.1 | 51.515 | 396 | 179 | 2 | 2 | 384 | 112 | 507 | 7.37e-159 | 457 |
| Msa1066580 | AT3G61270.1 | 53.867 | 375 | 160 | 2 | 22 | 384 | 91 | 464 | 1.26e-156 | 450 |
| Msa1066580 | AT2G45830.4 | 53.476 | 374 | 162 | 1 | 23 | 384 | 114 | 487 | 1.84e-156 | 451 |
| Msa1066580 | AT2G45830.1 | 53.476 | 374 | 162 | 1 | 23 | 384 | 114 | 487 | 1.84e-156 | 451 |
| Msa1066580 | AT3G48980.2 | 49.246 | 398 | 187 | 2 | 2 | 384 | 113 | 510 | 3.06e-152 | 441 |
| Msa1066580 | AT3G48980.1 | 49.246 | 398 | 187 | 2 | 2 | 384 | 107 | 504 | 3.35e-152 | 441 |
| Msa1066580 | AT3G61280.1 | 52.910 | 378 | 162 | 3 | 23 | 384 | 126 | 503 | 1.05e-145 | 424 |
| Msa1066580 | AT3G61290.1 | 51.187 | 379 | 168 | 3 | 23 | 384 | 39 | 417 | 1.16e-140 | 408 |
| Msa1066580 | AT2G45830.3 | 52.023 | 346 | 154 | 1 | 51 | 384 | 1 | 346 | 3.49e-140 | 404 |
| Msa1066580 | AT2G45830.6 | 52.023 | 346 | 154 | 1 | 51 | 384 | 1 | 346 | 3.49e-140 | 404 |
| Msa1066580 | AT2G45830.2 | 52.023 | 346 | 154 | 1 | 51 | 384 | 1 | 346 | 3.49e-140 | 404 |
| Msa1066580 | AT2G45830.5 | 52.023 | 346 | 154 | 1 | 51 | 384 | 1 | 346 | 3.49e-140 | 404 |
| Msa1066580 | AT3G61270.2 | 52.023 | 346 | 153 | 2 | 51 | 384 | 1 | 345 | 4.82e-139 | 401 |
| Msa1066580 | AT2G45840.1 | 49.500 | 400 | 175 | 5 | 2 | 384 | 98 | 487 | 1.47e-136 | 400 |
| Msa1066580 | AT1G63420.1 | 47.826 | 391 | 177 | 5 | 18 | 384 | 160 | 547 | 4.17e-133 | 393 |
| Msa1066580 | AT1G07220.1 | 44.780 | 364 | 180 | 6 | 28 | 378 | 115 | 470 | 1.65e-110 | 333 |
| Msa1066580 | AT1G63420.2 | 49.834 | 301 | 129 | 4 | 18 | 299 | 160 | 457 | 5.04e-101 | 308 |
| Msa1066580 | AT3G61280.2 | 51.584 | 221 | 93 | 2 | 23 | 229 | 126 | 346 | 2.10e-75 | 239 |
Find 84 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTATATGGAGGGAGTTTA+TGG | 0.224495 | 7_2:-60605126 | Msa1066580:CDS |
| AGAGAACGTAAATATGAAAT+TGG | 0.311793 | 7_2:-60605264 | Msa1066580:CDS |
| TAGATGGATTCATGAAGATT+TGG | 0.319301 | 7_2:-60607235 | Msa1066580:CDS |
| CTTGTTTGTCATCATAAATA+AGG | 0.350706 | 7_2:+60605050 | None:intergenic |
| AGAAGTGCTTATAAGGTATT+AGG | 0.357810 | 7_2:+60605875 | None:intergenic |
| CATGACAAGAACATGCAAAA+AGG | 0.365483 | 7_2:-60607331 | Msa1066580:CDS |
| AATATATGGATTACCTTCTC+TGG | 0.368962 | 7_2:+60605787 | None:intergenic |
| ATGGGCCAGAAGTGCTTATA+AGG | 0.373253 | 7_2:+60605868 | None:intergenic |
| TCTTGATGAAATGTTTGAAT+TGG | 0.373638 | 7_2:+60607300 | None:intergenic |
| GTAAAGAAATCATAATATCT+TGG | 0.373770 | 7_2:+60605904 | None:intergenic |
| CATGTCCAATGGGTGGTATA+TGG | 0.378007 | 7_2:-60605139 | Msa1066580:CDS |
| TAATACCTTATAAGCACTTC+TGG | 0.389030 | 7_2:-60605873 | Msa1066580:CDS |
| TATTAAGTATGCTGTAGATT+GGG | 0.389665 | 7_2:-60605821 | Msa1066580:CDS |
| CCCTGGGAGAGTACCAGATT+TGG | 0.390141 | 7_2:-60607040 | Msa1066580:CDS |
| CATGTCCAGAGCACTTTAGA+TGG | 0.391758 | 7_2:-60607251 | Msa1066580:CDS |
| CAAGGGATTTGTTCACTGTA+TGG | 0.396476 | 7_2:-60607089 | Msa1066580:CDS |
| GTGATTCCTGTACTCTTCCA+TGG | 0.417691 | 7_2:+60607210 | None:intergenic |
| CTCAACTGCTCCTGCAGGTA+TGG | 0.435117 | 7_2:+60605181 | None:intergenic |
| ATGTCACAGACCAGCATGAT+TGG | 0.455169 | 7_2:-60606480 | Msa1066580:CDS |
| GGAGTTTATGGTTGAGTCCA+TGG | 0.456395 | 7_2:-60605114 | Msa1066580:CDS |
| TCAAACAATAGCTCCAAATC+TGG | 0.457845 | 7_2:+60607027 | None:intergenic |
| ATATTAAGTATGCTGTAGAT+TGG | 0.458269 | 7_2:-60605822 | Msa1066580:CDS |
| TACAGGAATCACAAGGGAAA+TGG | 0.463132 | 7_2:-60607199 | Msa1066580:CDS |
| AGAAGATCAAATGGAAGGAT+AGG | 0.467492 | 7_2:-60606570 | Msa1066580:CDS |
| AAAGCAATAAGAAGATCAAA+TGG | 0.468954 | 7_2:-60606579 | Msa1066580:CDS |
| AAGGGATTTGTTCACTGTAT+GGG | 0.470688 | 7_2:-60607088 | Msa1066580:CDS |
| TCCAAATCTGGTACTCTCCC+AGG | 0.476324 | 7_2:+60607039 | None:intergenic |
| TGAATCCATCTAAAGTGCTC+TGG | 0.477066 | 7_2:+60607246 | None:intergenic |
| GCAGAAGAGATCGGCAGAGG+AGG | 0.484695 | 7_2:-60605302 | Msa1066580:CDS |
| GCCTAAGCTTATACCTTCGT+GGG | 0.487626 | 7_2:+60606509 | None:intergenic |
| GATGACAAACAAGGTATGAA+AGG | 0.492956 | 7_2:-60605040 | Msa1066580:three_prime_UTR |
| TCCTTCAACACTTTCTCCCA+TGG | 0.497364 | 7_2:+60606610 | None:intergenic |
| ACTGCTCCTGCAGGTATGGT+TGG | 0.500576 | 7_2:+60605185 | None:intergenic |
| TGAGGTCTGTTCTGAAAACT+TGG | 0.502712 | 7_2:-60605162 | Msa1066580:CDS |
| TGCCTAAGCTTATACCTTCG+TGG | 0.507114 | 7_2:+60606508 | None:intergenic |
| ACCATGGGAGAAAGTGTTGA+AGG | 0.512462 | 7_2:-60606611 | Msa1066580:CDS |
| ATGACAAACAAGGTATGAAA+GGG | 0.517583 | 7_2:-60605039 | Msa1066580:three_prime_UTR |
| CATGTTGATGTAGATGATGA+TGG | 0.525148 | 7_2:+60607270 | None:intergenic |
| TTTATGTGGAAGGGAGATCA+TGG | 0.533897 | 7_2:-60605981 | Msa1066580:CDS |
| TGAAAACTTGGCATGTCCAA+TGG | 0.534236 | 7_2:-60605150 | Msa1066580:CDS |
| ACAAGGGAAATGGTGGAAAG+TGG | 0.538257 | 7_2:-60607189 | Msa1066580:CDS |
| CAGAAGAGATCGGCAGAGGA+GGG | 0.540592 | 7_2:-60605301 | Msa1066580:CDS |
| ATGAAGGTACAAGATTTATG+TGG | 0.542099 | 7_2:-60605995 | Msa1066580:intron |
| TGCAGATTCATTTCAAACAA+GGG | 0.542697 | 7_2:-60607106 | Msa1066580:CDS |
| TTGGAGCTATTGTTTGAGAC+TGG | 0.545111 | 7_2:-60607021 | Msa1066580:CDS |
| TCGCTCATTGTTTACAACAA+AGG | 0.545650 | 7_2:+60605006 | None:intergenic |
| TTGGAACCATGGAAGAGTAC+AGG | 0.550060 | 7_2:-60607216 | Msa1066580:CDS |
| AGGGATTTGTTCACTGTATG+GGG | 0.551188 | 7_2:-60607087 | Msa1066580:CDS |
| CCCCACGAAGGTATAAGCTT+AGG | 0.565131 | 7_2:-60606510 | Msa1066580:CDS |
| GAAAACTTGGCATGTCCAAT+GGG | 0.566662 | 7_2:-60605149 | Msa1066580:CDS |
| ATTCAACAGGCAGAAGAGAT+CGG | 0.571806 | 7_2:-60605311 | Msa1066580:intron |
| TACGAGCATTCCAATCATGC+TGG | 0.572071 | 7_2:+60606470 | None:intergenic |
| TCCCTCCATATACCACCCAT+TGG | 0.572568 | 7_2:+60605134 | None:intergenic |
| CAGACCTCAACTGCTCCTGC+AGG | 0.574684 | 7_2:+60605176 | None:intergenic |
| TAAGGAGAAAACATATTACA+TGG | 0.574742 | 7_2:+60605068 | None:intergenic |
| ATGCAGATTCATTTCAAACA+AGG | 0.575080 | 7_2:-60607107 | Msa1066580:CDS |
| GTCCAATGGGTGGTATATGG+AGG | 0.577174 | 7_2:-60605136 | Msa1066580:CDS |
| ATTAAGTATGCTGTAGATTG+GGG | 0.584448 | 7_2:-60605820 | Msa1066580:CDS |
| GACTGGTGATAGAACTGTGT+TGG | 0.585078 | 7_2:-60607004 | Msa1066580:CDS |
| TTCATGAAGATTTGGAACCA+TGG | 0.585190 | 7_2:-60607227 | Msa1066580:CDS |
| CTTATTTATGATGACAAACA+AGG | 0.589384 | 7_2:-60605049 | Msa1066580:exon |
| GGTACAAGATTTATGTGGAA+GGG | 0.589725 | 7_2:-60605990 | Msa1066580:CDS |
| AGGAATCACAAGGGAAATGG+TGG | 0.591779 | 7_2:-60607196 | Msa1066580:CDS |
| CAGGCAGAAGAGATCGGCAG+AGG | 0.593552 | 7_2:-60605305 | Msa1066580:CDS |
| CATACCTGCAGGAGCAGTTG+AGG | 0.595048 | 7_2:-60605180 | Msa1066580:CDS |
| AGGTACAAGATTTATGTGGA+AGG | 0.598234 | 7_2:-60605991 | Msa1066580:CDS |
| TCCAATGGGTGGTATATGGA+GGG | 0.601512 | 7_2:-60605135 | Msa1066580:CDS |
| CAATAAGAAGATCAAATGGA+AGG | 0.601775 | 7_2:-60606575 | Msa1066580:CDS |
| TTTGAACCAACCATACCTGC+AGG | 0.605137 | 7_2:-60605191 | Msa1066580:CDS |
| TGGAATAAGGAAATTGAACA+AGG | 0.606297 | 7_2:-60606345 | Msa1066580:CDS |
| CCAAATCTGGTACTCTCCCA+GGG | 0.614217 | 7_2:+60607040 | None:intergenic |
| CTGAGACTGGAATAAAACCA+TGG | 0.614880 | 7_2:-60606627 | Msa1066580:intron |
| GAATGCTCGTATATATTCAG+TGG | 0.620382 | 7_2:-60606458 | Msa1066580:intron |
| GGGCAATACACATCCAGAGA+AGG | 0.623497 | 7_2:-60605800 | Msa1066580:intron |
| ATCACTTGGTGACTTAACCA+TGG | 0.629342 | 7_2:+60605097 | None:intergenic |
| TGAGACTGGAATAAAACCAT+GGG | 0.644894 | 7_2:-60606626 | Msa1066580:intron |
| TTACATGGAAGTGTATCACT+TGG | 0.652782 | 7_2:+60605083 | None:intergenic |
| GGAAGAGTACAGGAATCACA+AGG | 0.657748 | 7_2:-60607206 | Msa1066580:CDS |
| GGAATAAGGAAATTGAACAA+GGG | 0.681129 | 7_2:-60606344 | Msa1066580:CDS |
| TAGAAGATCAATGTACACAC+AGG | 0.688104 | 7_2:-60606305 | Msa1066580:intron |
| AACTTGGCATGTCCAATGGG+TGG | 0.715273 | 7_2:-60605146 | Msa1066580:CDS |
| ACACACATGTGTCCCCACGA+AGG | 0.726715 | 7_2:-60606522 | Msa1066580:CDS |
| GAAGAGTACAGGAATCACAA+GGG | 0.732492 | 7_2:-60607205 | Msa1066580:CDS |
| CCTAAGCTTATACCTTCGTG+GGG | 0.734199 | 7_2:+60606510 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTCAATATAATATATTTT+TGG | - | chr7_2:60606758-60606777 | Msa1066580:intron | 10.0% |
| !!! | ATGTCAATATAATATATTTT+TGG | - | chr7_2:60606758-60606777 | Msa1066580:intron | 10.0% |
| !!! | ATTTTTGGTTAAATTACATT+AGG | - | chr7_2:60606773-60606792 | Msa1066580:intron | 15.0% |
| !! | ATAATTATGAAGCAAATTAA+TGG | + | chr7_2:60606973-60606992 | None:intergenic | 15.0% |
| !!! | ATTTTTGGTTAAATTACATT+AGG | - | chr7_2:60606773-60606792 | Msa1066580:intron | 15.0% |
| !! | ATAATTATGAAGCAAATTAA+TGG | + | chr7_2:60606973-60606992 | None:intergenic | 15.0% |
| !!! | CTTTTTTAATCACAATTCTA+AGG | + | chr7_2:60605190-60605209 | None:intergenic | 20.0% |
| !! | CTTAGAATTGTGATTAAAAA+AGG | - | chr7_2:60605188-60605207 | Msa1066580:CDS | 20.0% |
| !! | TTGGATAAAAAAAGATTTGA+AGG | - | chr7_2:60605353-60605372 | Msa1066580:intron | 20.0% |
| !!! | TTGTTGTATTTTGAATTTGA+AGG | - | chr7_2:60605687-60605706 | Msa1066580:intron | 20.0% |
| !!! | TGTTGTATTTTGAATTTGAA+GGG | - | chr7_2:60605688-60605707 | Msa1066580:intron | 20.0% |
| !!! | ATCTAAGATCAAAAATTAGA+CGG | - | chr7_2:60606170-60606189 | Msa1066580:intron | 20.0% |
| !!! | ATTTTAACTTATTTTGCTAG+CGG | + | chr7_2:60606206-60606225 | None:intergenic | 20.0% |
| !!! | TAATATAGTGGATTTTGATT+TGG | + | chr7_2:60606270-60606289 | None:intergenic | 20.0% |
| !! | GTAAAGAAATCATAATATCT+TGG | + | chr7_2:60606437-60606456 | None:intergenic | 20.0% |
| !! | AGAAAATATCATAGTATTAG+GGG | + | chr7_2:60606581-60606600 | None:intergenic | 20.0% |
| !! | GAGAAAATATCATAGTATTA+GGG | + | chr7_2:60606582-60606601 | None:intergenic | 20.0% |
| !! | TGAGAAAATATCATAGTATT+AGG | + | chr7_2:60606583-60606602 | None:intergenic | 20.0% |
| !! | TCATAATTATTGTTTAATCG+TGG | - | chr7_2:60606983-60607002 | Msa1066580:CDS | 20.0% |
| !!! | TTTTTAATGCATAATTCAAC+AGG | - | chr7_2:60607014-60607033 | Msa1066580:CDS | 20.0% |
| !!! | CTTTTTTAATCACAATTCTA+AGG | + | chr7_2:60605190-60605209 | None:intergenic | 20.0% |
| !! | CTTAGAATTGTGATTAAAAA+AGG | - | chr7_2:60605188-60605207 | Msa1066580:CDS | 20.0% |
| !! | TTGGATAAAAAAAGATTTGA+AGG | - | chr7_2:60605353-60605372 | Msa1066580:intron | 20.0% |
| !!! | TTGTTGTATTTTGAATTTGA+AGG | - | chr7_2:60605687-60605706 | Msa1066580:intron | 20.0% |
| !!! | TGTTGTATTTTGAATTTGAA+GGG | - | chr7_2:60605688-60605707 | Msa1066580:intron | 20.0% |
| !!! | ATCTAAGATCAAAAATTAGA+CGG | - | chr7_2:60606170-60606189 | Msa1066580:intron | 20.0% |
| !!! | ATTTTAACTTATTTTGCTAG+CGG | + | chr7_2:60606206-60606225 | None:intergenic | 20.0% |
| !!! | TAATATAGTGGATTTTGATT+TGG | + | chr7_2:60606270-60606289 | None:intergenic | 20.0% |
| !! | GTAAAGAAATCATAATATCT+TGG | + | chr7_2:60606437-60606456 | None:intergenic | 20.0% |
| !! | AGAAAATATCATAGTATTAG+GGG | + | chr7_2:60606581-60606600 | None:intergenic | 20.0% |
| !! | GAGAAAATATCATAGTATTA+GGG | + | chr7_2:60606582-60606601 | None:intergenic | 20.0% |
| !! | TGAGAAAATATCATAGTATT+AGG | + | chr7_2:60606583-60606602 | None:intergenic | 20.0% |
| !! | TCATAATTATTGTTTAATCG+TGG | - | chr7_2:60606983-60607002 | Msa1066580:CDS | 20.0% |
| !!! | TTTTTAATGCATAATTCAAC+AGG | - | chr7_2:60607014-60607033 | Msa1066580:CDS | 20.0% |
| ! | TCTTGATGAAATGTTTGAAT+TGG | + | chr7_2:60605041-60605060 | None:intergenic | 25.0% |
| ! | TGTCCACAATAACTAAAAAT+AGG | + | chr7_2:60605401-60605420 | None:intergenic | 25.0% |
| !!! | ATTACTTTTCTCATCTTATG+AGG | - | chr7_2:60605496-60605515 | Msa1066580:intron | 25.0% |
| !! | GAAATATTTCAACGTGTTTT+TGG | - | chr7_2:60605551-60605570 | Msa1066580:intron | 25.0% |
| ! | AAAGCAATAAGAAGATCAAA+TGG | - | chr7_2:60605759-60605778 | Msa1066580:intron | 25.0% |
| !!! | ATATTGTTTGTTTTTAGCAC+TGG | - | chr7_2:60605973-60605992 | Msa1066580:CDS | 25.0% |
| ! | ATCAAAAATTAGACGGTTTA+TGG | - | chr7_2:60606177-60606196 | Msa1066580:intron | 25.0% |
| ! | AAATCCACTATATTACCTTT+AGG | - | chr7_2:60606275-60606294 | Msa1066580:intron | 25.0% |
| ! | ATATTAAGTATGCTGTAGAT+TGG | - | chr7_2:60606516-60606535 | Msa1066580:CDS | 25.0% |
| ! | TATTAAGTATGCTGTAGATT+GGG | - | chr7_2:60606517-60606536 | Msa1066580:CDS | 25.0% |
| !!! | ATTGGTCCTTTAAGTTATTT+TGG | - | chr7_2:60606824-60606843 | Msa1066580:intron | 25.0% |
| !!! | ATTGGTCGTTTAAGTTATTT+TGG | - | chr7_2:60606884-60606903 | Msa1066580:intron | 25.0% |
| ! | GAAAACGTTTACAAACTTAA+AGG | + | chr7_2:60606922-60606941 | None:intergenic | 25.0% |
| !! | GAAGCAAATTAATGGAATTT+TGG | + | chr7_2:60606965-60606984 | None:intergenic | 25.0% |
| ! | AGAGAACGTAAATATGAAAT+TGG | - | chr7_2:60607074-60607093 | Msa1066580:CDS | 25.0% |
| ! | TAAGGAGAAAACATATTACA+TGG | + | chr7_2:60607273-60607292 | None:intergenic | 25.0% |
| ! | CTTGTTTGTCATCATAAATA+AGG | + | chr7_2:60607291-60607310 | None:intergenic | 25.0% |
| ! | CTTATTTATGATGACAAACA+AGG | - | chr7_2:60607289-60607308 | Msa1066580:CDS | 25.0% |
| ! | TCTTGATGAAATGTTTGAAT+TGG | + | chr7_2:60605041-60605060 | None:intergenic | 25.0% |
| ! | TGTCCACAATAACTAAAAAT+AGG | + | chr7_2:60605401-60605420 | None:intergenic | 25.0% |
| !!! | ATTACTTTTCTCATCTTATG+AGG | - | chr7_2:60605496-60605515 | Msa1066580:intron | 25.0% |
| !! | GAAATATTTCAACGTGTTTT+TGG | - | chr7_2:60605551-60605570 | Msa1066580:intron | 25.0% |
| ! | AAAGCAATAAGAAGATCAAA+TGG | - | chr7_2:60605759-60605778 | Msa1066580:intron | 25.0% |
| !!! | ATATTGTTTGTTTTTAGCAC+TGG | - | chr7_2:60605973-60605992 | Msa1066580:CDS | 25.0% |
| ! | ATCAAAAATTAGACGGTTTA+TGG | - | chr7_2:60606177-60606196 | Msa1066580:intron | 25.0% |
| ! | AAATCCACTATATTACCTTT+AGG | - | chr7_2:60606275-60606294 | Msa1066580:intron | 25.0% |
| ! | ATATTAAGTATGCTGTAGAT+TGG | - | chr7_2:60606516-60606535 | Msa1066580:CDS | 25.0% |
| ! | TATTAAGTATGCTGTAGATT+GGG | - | chr7_2:60606517-60606536 | Msa1066580:CDS | 25.0% |
| !!! | ATTGGTCCTTTAAGTTATTT+TGG | - | chr7_2:60606824-60606843 | Msa1066580:intron | 25.0% |
| !!! | ATTGGTCGTTTAAGTTATTT+TGG | - | chr7_2:60606884-60606903 | Msa1066580:intron | 25.0% |
| ! | GAAAACGTTTACAAACTTAA+AGG | + | chr7_2:60606922-60606941 | None:intergenic | 25.0% |
| !! | GAAGCAAATTAATGGAATTT+TGG | + | chr7_2:60606965-60606984 | None:intergenic | 25.0% |
| ! | AGAGAACGTAAATATGAAAT+TGG | - | chr7_2:60607074-60607093 | Msa1066580:CDS | 25.0% |
| ! | TAAGGAGAAAACATATTACA+TGG | + | chr7_2:60607273-60607292 | None:intergenic | 25.0% |
| ! | CTTGTTTGTCATCATAAATA+AGG | + | chr7_2:60607291-60607310 | None:intergenic | 25.0% |
| ! | CTTATTTATGATGACAAACA+AGG | - | chr7_2:60607289-60607308 | Msa1066580:CDS | 25.0% |
| ! | TAGATGGATTCATGAAGATT+TGG | - | chr7_2:60605103-60605122 | Msa1066580:CDS | 30.0% |
| ATGCAGATTCATTTCAAACA+AGG | - | chr7_2:60605231-60605250 | Msa1066580:CDS | 30.0% | |
| TGCAGATTCATTTCAAACAA+GGG | - | chr7_2:60605232-60605251 | Msa1066580:CDS | 30.0% | |
| CAATAACTAAAAATAGGTGG+TGG | + | chr7_2:60605395-60605414 | None:intergenic | 30.0% | |
| CCACAATAACTAAAAATAGG+TGG | + | chr7_2:60605398-60605417 | None:intergenic | 30.0% | |
| !!! | CCACCTATTTTTAGTTATTG+TGG | - | chr7_2:60605395-60605414 | Msa1066580:intron | 30.0% |
| TTGATATTGTCTTTCCTGAT+TGG | - | chr7_2:60605432-60605451 | Msa1066580:intron | 30.0% | |
| AAGTCTTCTGCATTCAATTT+AGG | - | chr7_2:60605471-60605490 | Msa1066580:intron | 30.0% | |
| !!! | ATATTTCAACGTGTTTTTGG+AGG | - | chr7_2:60605554-60605573 | Msa1066580:intron | 30.0% |
| CAATAAGAAGATCAAATGGA+AGG | - | chr7_2:60605763-60605782 | Msa1066580:intron | 30.0% | |
| ! | TTTCCTTTCCAAAAAGCATA+GGG | + | chr7_2:60605797-60605816 | None:intergenic | 30.0% |
| !!! | TTGTTTTTAGCACTGGAATA+AGG | - | chr7_2:60605980-60605999 | Msa1066580:CDS | 30.0% |
| TGGAATAAGGAAATTGAACA+AGG | - | chr7_2:60605993-60606012 | Msa1066580:intron | 30.0% | |
| GGAATAAGGAAATTGAACAA+GGG | - | chr7_2:60605994-60606013 | Msa1066580:intron | 30.0% | |
| ! | CGACTGTTAATTTGAAATCA+AGG | - | chr7_2:60606228-60606247 | Msa1066580:intron | 30.0% |
| ! | TTAATTTGAAATCAAGGCGA+CGG | - | chr7_2:60606234-60606253 | Msa1066580:intron | 30.0% |
| CAAACCTAAAGGTAATATAG+TGG | + | chr7_2:60606282-60606301 | None:intergenic | 30.0% | |
| !!! | CTTGTGTTGCTTTTTTATGA+AGG | - | chr7_2:60606327-60606346 | Msa1066580:CDS | 30.0% |
| ! | ATGAAGGTACAAGATTTATG+TGG | - | chr7_2:60606343-60606362 | Msa1066580:CDS | 30.0% |
| !! | AGAAGTGCTTATAAGGTATT+AGG | + | chr7_2:60606466-60606485 | None:intergenic | 30.0% |
| TAATACCTTATAAGCACTTC+TGG | - | chr7_2:60606465-60606484 | Msa1066580:CDS | 30.0% | |
| ATTAAGTATGCTGTAGATTG+GGG | - | chr7_2:60606518-60606537 | Msa1066580:CDS | 30.0% | |
| ! | AATATATGGATTACCTTCTC+TGG | + | chr7_2:60606554-60606573 | None:intergenic | 30.0% |
| AATATCATAGTATTAGGGGA+AGG | + | chr7_2:60606577-60606596 | None:intergenic | 30.0% | |
| AGTAAAGCTCAAATGATAGA+AGG | - | chr7_2:60606628-60606647 | Msa1066580:intron | 30.0% | |
| GTTACAAACCTCAAACTTAA+AGG | + | chr7_2:60606802-60606821 | None:intergenic | 30.0% | |
| GTGTGACCAAAATAACTTAA+AGG | + | chr7_2:60606833-60606852 | None:intergenic | 30.0% | |
| ! | ACACAAGTCCTTTAAGTTTA+AGG | - | chr7_2:60606851-60606870 | Msa1066580:intron | 30.0% |
| GTTAGAAGCCTTAAACTTAA+AGG | + | chr7_2:60606862-60606881 | None:intergenic | 30.0% | |
| !!! | TGGAATTTTGGTTAATCAGA+AGG | + | chr7_2:60606953-60606972 | None:intergenic | 30.0% |
| ATGACAAACAAGGTATGAAA+GGG | - | chr7_2:60607299-60607318 | Msa1066580:CDS | 30.0% | |
| ! | TAGATGGATTCATGAAGATT+TGG | - | chr7_2:60605103-60605122 | Msa1066580:CDS | 30.0% |
| ATGCAGATTCATTTCAAACA+AGG | - | chr7_2:60605231-60605250 | Msa1066580:CDS | 30.0% | |
| TGCAGATTCATTTCAAACAA+GGG | - | chr7_2:60605232-60605251 | Msa1066580:CDS | 30.0% | |
| CAATAACTAAAAATAGGTGG+TGG | + | chr7_2:60605395-60605414 | None:intergenic | 30.0% | |
| CCACAATAACTAAAAATAGG+TGG | + | chr7_2:60605398-60605417 | None:intergenic | 30.0% | |
| !!! | CCACCTATTTTTAGTTATTG+TGG | - | chr7_2:60605395-60605414 | Msa1066580:intron | 30.0% |
| TTGATATTGTCTTTCCTGAT+TGG | - | chr7_2:60605432-60605451 | Msa1066580:intron | 30.0% | |
| AAGTCTTCTGCATTCAATTT+AGG | - | chr7_2:60605471-60605490 | Msa1066580:intron | 30.0% | |
| !!! | ATATTTCAACGTGTTTTTGG+AGG | - | chr7_2:60605554-60605573 | Msa1066580:intron | 30.0% |
| CAATAAGAAGATCAAATGGA+AGG | - | chr7_2:60605763-60605782 | Msa1066580:intron | 30.0% | |
| ! | TTTCCTTTCCAAAAAGCATA+GGG | + | chr7_2:60605797-60605816 | None:intergenic | 30.0% |
| !!! | TTGTTTTTAGCACTGGAATA+AGG | - | chr7_2:60605980-60605999 | Msa1066580:CDS | 30.0% |
| TGGAATAAGGAAATTGAACA+AGG | - | chr7_2:60605993-60606012 | Msa1066580:intron | 30.0% | |
| GGAATAAGGAAATTGAACAA+GGG | - | chr7_2:60605994-60606013 | Msa1066580:intron | 30.0% | |
| ! | CGACTGTTAATTTGAAATCA+AGG | - | chr7_2:60606228-60606247 | Msa1066580:intron | 30.0% |
| ! | TTAATTTGAAATCAAGGCGA+CGG | - | chr7_2:60606234-60606253 | Msa1066580:intron | 30.0% |
| CAAACCTAAAGGTAATATAG+TGG | + | chr7_2:60606282-60606301 | None:intergenic | 30.0% | |
| !!! | CTTGTGTTGCTTTTTTATGA+AGG | - | chr7_2:60606327-60606346 | Msa1066580:CDS | 30.0% |
| ! | ATGAAGGTACAAGATTTATG+TGG | - | chr7_2:60606343-60606362 | Msa1066580:CDS | 30.0% |
| !! | AGAAGTGCTTATAAGGTATT+AGG | + | chr7_2:60606466-60606485 | None:intergenic | 30.0% |
| TAATACCTTATAAGCACTTC+TGG | - | chr7_2:60606465-60606484 | Msa1066580:CDS | 30.0% | |
| ATTAAGTATGCTGTAGATTG+GGG | - | chr7_2:60606518-60606537 | Msa1066580:CDS | 30.0% | |
| ! | AATATATGGATTACCTTCTC+TGG | + | chr7_2:60606554-60606573 | None:intergenic | 30.0% |
| AATATCATAGTATTAGGGGA+AGG | + | chr7_2:60606577-60606596 | None:intergenic | 30.0% | |
| AGTAAAGCTCAAATGATAGA+AGG | - | chr7_2:60606628-60606647 | Msa1066580:intron | 30.0% | |
| GTTACAAACCTCAAACTTAA+AGG | + | chr7_2:60606802-60606821 | None:intergenic | 30.0% | |
| GTGTGACCAAAATAACTTAA+AGG | + | chr7_2:60606833-60606852 | None:intergenic | 30.0% | |
| ! | ACACAAGTCCTTTAAGTTTA+AGG | - | chr7_2:60606851-60606870 | Msa1066580:intron | 30.0% |
| GTTAGAAGCCTTAAACTTAA+AGG | + | chr7_2:60606862-60606881 | None:intergenic | 30.0% | |
| !!! | TGGAATTTTGGTTAATCAGA+AGG | + | chr7_2:60606953-60606972 | None:intergenic | 30.0% |
| ATGACAAACAAGGTATGAAA+GGG | - | chr7_2:60607299-60607318 | Msa1066580:CDS | 30.0% | |
| CATGTTGATGTAGATGATGA+TGG | + | chr7_2:60605071-60605090 | None:intergenic | 35.0% | |
| ! | TTCATGAAGATTTGGAACCA+TGG | - | chr7_2:60605111-60605130 | Msa1066580:CDS | 35.0% |
| ! | AAGGGATTTGTTCACTGTAT+GGG | - | chr7_2:60605250-60605269 | Msa1066580:CDS | 35.0% |
| ! | GGGGAATAGTACAACTTTTA+AGG | - | chr7_2:60605270-60605289 | Msa1066580:CDS | 35.0% |
| !!! | AACTTTTAAGGTTGTACCCT+GGG | - | chr7_2:60605282-60605301 | Msa1066580:CDS | 35.0% |
| TCAAACAATAGCTCCAAATC+TGG | + | chr7_2:60605314-60605333 | None:intergenic | 35.0% | |
| TCAGAGTTTCGAATCTGAAT+AGG | + | chr7_2:60605533-60605552 | None:intergenic | 35.0% | |
| TGAGACTGGAATAAAACCAT+GGG | - | chr7_2:60605712-60605731 | Msa1066580:intron | 35.0% | |
| AGAAGATCAAATGGAAGGAT+AGG | - | chr7_2:60605768-60605787 | Msa1066580:intron | 35.0% | |
| ! | ATAGGATACCCTATGCTTTT+TGG | - | chr7_2:60605786-60605805 | Msa1066580:intron | 35.0% |
| !! | ATACCCTATGCTTTTTGGAA+AGG | - | chr7_2:60605791-60605810 | Msa1066580:intron | 35.0% |
| ! | GTTTCCTTTCCAAAAAGCAT+AGG | + | chr7_2:60605798-60605817 | None:intergenic | 35.0% |
| GAATGCTCGTATATATTCAG+TGG | - | chr7_2:60605880-60605899 | Msa1066580:CDS | 35.0% | |
| TAGAAGATCAATGTACACAC+AGG | - | chr7_2:60606033-60606052 | Msa1066580:intron | 35.0% | |
| AGGTACAAGATTTATGTGGA+AGG | - | chr7_2:60606347-60606366 | Msa1066580:CDS | 35.0% | |
| GGTACAAGATTTATGTGGAA+GGG | - | chr7_2:60606348-60606367 | Msa1066580:CDS | 35.0% | |
| !! | CACATGTTTTGCTTGTTGAT+GGG | + | chr7_2:60606491-60606510 | None:intergenic | 35.0% |
| !! | ACACATGTTTTGCTTGTTGA+TGG | + | chr7_2:60606492-60606511 | None:intergenic | 35.0% |
| GTATTAGGGGAAGGAATATA+TGG | + | chr7_2:60606568-60606587 | None:intergenic | 35.0% | |
| AAGCTCAAATGATAGAAGGT+CGG | - | chr7_2:60606632-60606651 | Msa1066580:intron | 35.0% | |
| TTGTGCGTTAAAGATTCTAG+CGG | + | chr7_2:60606736-60606755 | None:intergenic | 35.0% | |
| ! | TTAGGAGTCCTTTAAGTTTG+AGG | - | chr7_2:60606791-60606810 | Msa1066580:intron | 35.0% |
| ! | GTTTGAGGTTTGTAACAGAT+TGG | - | chr7_2:60606806-60606825 | Msa1066580:intron | 35.0% |
| ! | GTTTAAGGCTTCTAACAGAT+TGG | - | chr7_2:60606866-60606885 | Msa1066580:intron | 35.0% |
| ! | TTACATGGAAGTGTATCACT+TGG | + | chr7_2:60607258-60607277 | None:intergenic | 35.0% |
| GATGACAAACAAGGTATGAA+AGG | - | chr7_2:60607298-60607317 | Msa1066580:CDS | 35.0% | |
| CATGTTGATGTAGATGATGA+TGG | + | chr7_2:60605071-60605090 | None:intergenic | 35.0% | |
| ! | TTCATGAAGATTTGGAACCA+TGG | - | chr7_2:60605111-60605130 | Msa1066580:CDS | 35.0% |
| ! | AAGGGATTTGTTCACTGTAT+GGG | - | chr7_2:60605250-60605269 | Msa1066580:CDS | 35.0% |
| ! | GGGGAATAGTACAACTTTTA+AGG | - | chr7_2:60605270-60605289 | Msa1066580:CDS | 35.0% |
| !!! | AACTTTTAAGGTTGTACCCT+GGG | - | chr7_2:60605282-60605301 | Msa1066580:CDS | 35.0% |
| TCAAACAATAGCTCCAAATC+TGG | + | chr7_2:60605314-60605333 | None:intergenic | 35.0% | |
| TCAGAGTTTCGAATCTGAAT+AGG | + | chr7_2:60605533-60605552 | None:intergenic | 35.0% | |
| TGAGACTGGAATAAAACCAT+GGG | - | chr7_2:60605712-60605731 | Msa1066580:intron | 35.0% | |
| AGAAGATCAAATGGAAGGAT+AGG | - | chr7_2:60605768-60605787 | Msa1066580:intron | 35.0% | |
| ! | ATAGGATACCCTATGCTTTT+TGG | - | chr7_2:60605786-60605805 | Msa1066580:intron | 35.0% |
| !! | ATACCCTATGCTTTTTGGAA+AGG | - | chr7_2:60605791-60605810 | Msa1066580:intron | 35.0% |
| ! | GTTTCCTTTCCAAAAAGCAT+AGG | + | chr7_2:60605798-60605817 | None:intergenic | 35.0% |
| GAATGCTCGTATATATTCAG+TGG | - | chr7_2:60605880-60605899 | Msa1066580:CDS | 35.0% | |
| TAGAAGATCAATGTACACAC+AGG | - | chr7_2:60606033-60606052 | Msa1066580:intron | 35.0% | |
| AGGTACAAGATTTATGTGGA+AGG | - | chr7_2:60606347-60606366 | Msa1066580:CDS | 35.0% | |
| GGTACAAGATTTATGTGGAA+GGG | - | chr7_2:60606348-60606367 | Msa1066580:CDS | 35.0% | |
| !! | CACATGTTTTGCTTGTTGAT+GGG | + | chr7_2:60606491-60606510 | None:intergenic | 35.0% |
| !! | ACACATGTTTTGCTTGTTGA+TGG | + | chr7_2:60606492-60606511 | None:intergenic | 35.0% |
| GTATTAGGGGAAGGAATATA+TGG | + | chr7_2:60606568-60606587 | None:intergenic | 35.0% | |
| AAGCTCAAATGATAGAAGGT+CGG | - | chr7_2:60606632-60606651 | Msa1066580:intron | 35.0% | |
| TTGTGCGTTAAAGATTCTAG+CGG | + | chr7_2:60606736-60606755 | None:intergenic | 35.0% | |
| ! | TTAGGAGTCCTTTAAGTTTG+AGG | - | chr7_2:60606791-60606810 | Msa1066580:intron | 35.0% |
| ! | GTTTGAGGTTTGTAACAGAT+TGG | - | chr7_2:60606806-60606825 | Msa1066580:intron | 35.0% |
| ! | GTTTAAGGCTTCTAACAGAT+TGG | - | chr7_2:60606866-60606885 | Msa1066580:intron | 35.0% |
| ! | TTACATGGAAGTGTATCACT+TGG | + | chr7_2:60607258-60607277 | None:intergenic | 35.0% |
| GATGACAAACAAGGTATGAA+AGG | - | chr7_2:60607298-60607317 | Msa1066580:CDS | 35.0% | |
| ! | TGAATCCATCTAAAGTGCTC+TGG | + | chr7_2:60605095-60605114 | None:intergenic | 40.0% |
| ! | GAAGAGTACAGGAATCACAA+GGG | - | chr7_2:60605133-60605152 | Msa1066580:CDS | 40.0% |
| TACAGGAATCACAAGGGAAA+TGG | - | chr7_2:60605139-60605158 | Msa1066580:CDS | 40.0% | |
| ! | CAAGGGATTTGTTCACTGTA+TGG | - | chr7_2:60605249-60605268 | Msa1066580:CDS | 40.0% |
| ! | AGGGATTTGTTCACTGTATG+GGG | - | chr7_2:60605251-60605270 | Msa1066580:CDS | 40.0% |
| !!! | CAACTTTTAAGGTTGTACCC+TGG | - | chr7_2:60605281-60605300 | Msa1066580:CDS | 40.0% |
| ! | TTGGAGCTATTGTTTGAGAC+TGG | - | chr7_2:60605317-60605336 | Msa1066580:intron | 40.0% |
| !! | TCTTTCCTGATTGGTCCTTT+TGG | - | chr7_2:60605441-60605460 | Msa1066580:intron | 40.0% |
| !! | CTTTCCTGATTGGTCCTTTT+GGG | - | chr7_2:60605442-60605461 | Msa1066580:intron | 40.0% |
| !! | TTTCCTGATTGGTCCTTTTG+GGG | - | chr7_2:60605443-60605462 | Msa1066580:intron | 40.0% |
| !!! | GTGTTTTTGGAGGTTTTACG+AGG | - | chr7_2:60605564-60605583 | Msa1066580:intron | 40.0% |
| TAATGCGCGTGAGAAACTTA+TGG | - | chr7_2:60605623-60605642 | Msa1066580:intron | 40.0% | |
| AATGCGCGTGAGAAACTTAT+GGG | - | chr7_2:60605624-60605643 | Msa1066580:intron | 40.0% | |
| CTGAGACTGGAATAAAACCA+TGG | - | chr7_2:60605711-60605730 | Msa1066580:intron | 40.0% | |
| ACTGAGAGTGACAAACCTAA+AGG | + | chr7_2:60606293-60606312 | None:intergenic | 40.0% | |
| TTTATGTGGAAGGGAGATCA+TGG | - | chr7_2:60606357-60606376 | Msa1066580:intron | 40.0% | |
| ATTCAACAGGCAGAAGAGAT+CGG | - | chr7_2:60607027-60607046 | Msa1066580:CDS | 40.0% | |
| !! | TGAGGTCTGTTCTGAAAACT+TGG | - | chr7_2:60607176-60607195 | Msa1066580:CDS | 40.0% |
| TGAAAACTTGGCATGTCCAA+TGG | - | chr7_2:60607188-60607207 | Msa1066580:CDS | 40.0% | |
| GAAAACTTGGCATGTCCAAT+GGG | - | chr7_2:60607189-60607208 | Msa1066580:CDS | 40.0% | |
| TGGTATATGGAGGGAGTTTA+TGG | - | chr7_2:60607212-60607231 | Msa1066580:CDS | 40.0% | |
| ! | ATCACTTGGTGACTTAACCA+TGG | + | chr7_2:60607244-60607263 | None:intergenic | 40.0% |
| ! | TGAATCCATCTAAAGTGCTC+TGG | + | chr7_2:60605095-60605114 | None:intergenic | 40.0% |
| ! | GAAGAGTACAGGAATCACAA+GGG | - | chr7_2:60605133-60605152 | Msa1066580:CDS | 40.0% |
| TACAGGAATCACAAGGGAAA+TGG | - | chr7_2:60605139-60605158 | Msa1066580:CDS | 40.0% | |
| ! | CAAGGGATTTGTTCACTGTA+TGG | - | chr7_2:60605249-60605268 | Msa1066580:CDS | 40.0% |
| ! | AGGGATTTGTTCACTGTATG+GGG | - | chr7_2:60605251-60605270 | Msa1066580:CDS | 40.0% |
| !!! | CAACTTTTAAGGTTGTACCC+TGG | - | chr7_2:60605281-60605300 | Msa1066580:CDS | 40.0% |
| ! | TTGGAGCTATTGTTTGAGAC+TGG | - | chr7_2:60605317-60605336 | Msa1066580:intron | 40.0% |
| !! | TCTTTCCTGATTGGTCCTTT+TGG | - | chr7_2:60605441-60605460 | Msa1066580:intron | 40.0% |
| !! | CTTTCCTGATTGGTCCTTTT+GGG | - | chr7_2:60605442-60605461 | Msa1066580:intron | 40.0% |
| !! | TTTCCTGATTGGTCCTTTTG+GGG | - | chr7_2:60605443-60605462 | Msa1066580:intron | 40.0% |
| !!! | GTGTTTTTGGAGGTTTTACG+AGG | - | chr7_2:60605564-60605583 | Msa1066580:intron | 40.0% |
| TAATGCGCGTGAGAAACTTA+TGG | - | chr7_2:60605623-60605642 | Msa1066580:intron | 40.0% | |
| AATGCGCGTGAGAAACTTAT+GGG | - | chr7_2:60605624-60605643 | Msa1066580:intron | 40.0% | |
| CTGAGACTGGAATAAAACCA+TGG | - | chr7_2:60605711-60605730 | Msa1066580:intron | 40.0% | |
| ACTGAGAGTGACAAACCTAA+AGG | + | chr7_2:60606293-60606312 | None:intergenic | 40.0% | |
| TTTATGTGGAAGGGAGATCA+TGG | - | chr7_2:60606357-60606376 | Msa1066580:intron | 40.0% | |
| ATTCAACAGGCAGAAGAGAT+CGG | - | chr7_2:60607027-60607046 | Msa1066580:CDS | 40.0% | |
| !! | TGAGGTCTGTTCTGAAAACT+TGG | - | chr7_2:60607176-60607195 | Msa1066580:CDS | 40.0% |
| TGAAAACTTGGCATGTCCAA+TGG | - | chr7_2:60607188-60607207 | Msa1066580:CDS | 40.0% | |
| GAAAACTTGGCATGTCCAAT+GGG | - | chr7_2:60607189-60607208 | Msa1066580:CDS | 40.0% | |
| TGGTATATGGAGGGAGTTTA+TGG | - | chr7_2:60607212-60607231 | Msa1066580:CDS | 40.0% | |
| ! | ATCACTTGGTGACTTAACCA+TGG | + | chr7_2:60607244-60607263 | None:intergenic | 40.0% |
| ! | CATGTCCAGAGCACTTTAGA+TGG | - | chr7_2:60605087-60605106 | Msa1066580:CDS | 45.0% |
| ! | TTGGAACCATGGAAGAGTAC+AGG | - | chr7_2:60605122-60605141 | Msa1066580:CDS | 45.0% |
| GTGATTCCTGTACTCTTCCA+TGG | + | chr7_2:60605131-60605150 | None:intergenic | 45.0% | |
| ! | GGAAGAGTACAGGAATCACA+AGG | - | chr7_2:60605132-60605151 | Msa1066580:CDS | 45.0% |
| AGGAATCACAAGGGAAATGG+TGG | - | chr7_2:60605142-60605161 | Msa1066580:CDS | 45.0% | |
| ! | ACAAGGGAAATGGTGGAAAG+TGG | - | chr7_2:60605149-60605168 | Msa1066580:CDS | 45.0% |
| GACTGGTGATAGAACTGTGT+TGG | - | chr7_2:60605334-60605353 | Msa1066580:intron | 45.0% | |
| GAAGACTTACCAACCCCAAA+AGG | + | chr7_2:60605459-60605478 | None:intergenic | 45.0% | |
| GAATCTGAATAGGACGCACA+AGG | + | chr7_2:60605523-60605542 | None:intergenic | 45.0% | |
| TGAATTTGAAGGGCTGAGAC+TGG | - | chr7_2:60605698-60605717 | Msa1066580:intron | 45.0% | |
| !! | ACCATGGGAGAAAGTGTTGA+AGG | - | chr7_2:60605727-60605746 | Msa1066580:intron | 45.0% |
| TCCTTCAACACTTTCTCCCA+TGG | + | chr7_2:60605731-60605750 | None:intergenic | 45.0% | |
| CCTAAGCTTATACCTTCGTG+GGG | + | chr7_2:60605831-60605850 | None:intergenic | 45.0% | |
| GCCTAAGCTTATACCTTCGT+GGG | + | chr7_2:60605832-60605851 | None:intergenic | 45.0% | |
| TGCCTAAGCTTATACCTTCG+TGG | + | chr7_2:60605833-60605852 | None:intergenic | 45.0% | |
| ATGTCACAGACCAGCATGAT+TGG | - | chr7_2:60605858-60605877 | Msa1066580:CDS | 45.0% | |
| TACGAGCATTCCAATCATGC+TGG | + | chr7_2:60605871-60605890 | None:intergenic | 45.0% | |
| !! | ATGGGCCAGAAGTGCTTATA+AGG | + | chr7_2:60606473-60606492 | None:intergenic | 45.0% |
| TTTGAACCAACCATACCTGC+AGG | - | chr7_2:60607147-60607166 | Msa1066580:CDS | 45.0% | |
| CATGTCCAATGGGTGGTATA+TGG | - | chr7_2:60607199-60607218 | Msa1066580:CDS | 45.0% | |
| TCCAATGGGTGGTATATGGA+GGG | - | chr7_2:60607203-60607222 | Msa1066580:CDS | 45.0% | |
| GGAGTTTATGGTTGAGTCCA+TGG | - | chr7_2:60607224-60607243 | Msa1066580:CDS | 45.0% | |
| ! | CATGTCCAGAGCACTTTAGA+TGG | - | chr7_2:60605087-60605106 | Msa1066580:CDS | 45.0% |
| ! | TTGGAACCATGGAAGAGTAC+AGG | - | chr7_2:60605122-60605141 | Msa1066580:CDS | 45.0% |
| GTGATTCCTGTACTCTTCCA+TGG | + | chr7_2:60605131-60605150 | None:intergenic | 45.0% | |
| ! | GGAAGAGTACAGGAATCACA+AGG | - | chr7_2:60605132-60605151 | Msa1066580:CDS | 45.0% |
| AGGAATCACAAGGGAAATGG+TGG | - | chr7_2:60605142-60605161 | Msa1066580:CDS | 45.0% | |
| ! | ACAAGGGAAATGGTGGAAAG+TGG | - | chr7_2:60605149-60605168 | Msa1066580:CDS | 45.0% |
| GACTGGTGATAGAACTGTGT+TGG | - | chr7_2:60605334-60605353 | Msa1066580:intron | 45.0% | |
| GAAGACTTACCAACCCCAAA+AGG | + | chr7_2:60605459-60605478 | None:intergenic | 45.0% | |
| GAATCTGAATAGGACGCACA+AGG | + | chr7_2:60605523-60605542 | None:intergenic | 45.0% | |
| TGAATTTGAAGGGCTGAGAC+TGG | - | chr7_2:60605698-60605717 | Msa1066580:intron | 45.0% | |
| !! | ACCATGGGAGAAAGTGTTGA+AGG | - | chr7_2:60605727-60605746 | Msa1066580:intron | 45.0% |
| TCCTTCAACACTTTCTCCCA+TGG | + | chr7_2:60605731-60605750 | None:intergenic | 45.0% | |
| CCTAAGCTTATACCTTCGTG+GGG | + | chr7_2:60605831-60605850 | None:intergenic | 45.0% | |
| GCCTAAGCTTATACCTTCGT+GGG | + | chr7_2:60605832-60605851 | None:intergenic | 45.0% | |
| TGCCTAAGCTTATACCTTCG+TGG | + | chr7_2:60605833-60605852 | None:intergenic | 45.0% | |
| ATGTCACAGACCAGCATGAT+TGG | - | chr7_2:60605858-60605877 | Msa1066580:CDS | 45.0% | |
| TACGAGCATTCCAATCATGC+TGG | + | chr7_2:60605871-60605890 | None:intergenic | 45.0% | |
| !! | ATGGGCCAGAAGTGCTTATA+AGG | + | chr7_2:60606473-60606492 | None:intergenic | 45.0% |
| TTTGAACCAACCATACCTGC+AGG | - | chr7_2:60607147-60607166 | Msa1066580:CDS | 45.0% | |
| CATGTCCAATGGGTGGTATA+TGG | - | chr7_2:60607199-60607218 | Msa1066580:CDS | 45.0% | |
| TCCAATGGGTGGTATATGGA+GGG | - | chr7_2:60607203-60607222 | Msa1066580:CDS | 45.0% | |
| GGAGTTTATGGTTGAGTCCA+TGG | - | chr7_2:60607224-60607243 | Msa1066580:CDS | 45.0% | |
| CCAAATCTGGTACTCTCCCA+GGG | + | chr7_2:60605301-60605320 | None:intergenic | 50.0% | |
| TCCAAATCTGGTACTCTCCC+AGG | + | chr7_2:60605302-60605321 | None:intergenic | 50.0% | |
| CAACCCCAAAAGGACCAATC+AGG | + | chr7_2:60605449-60605468 | None:intergenic | 50.0% | |
| !!! | CTGATTGGTCCTTTTGGGGT+TGG | - | chr7_2:60605447-60605466 | Msa1066580:intron | 50.0% |
| CTCACGCGCATTATGCAGTT+TGG | + | chr7_2:60605616-60605635 | None:intergenic | 50.0% | |
| CGCGTGAGAAACTTATGGGA+CGG | - | chr7_2:60605628-60605647 | Msa1066580:intron | 50.0% | |
| ! | CCCCACGAAGGTATAAGCTT+AGG | - | chr7_2:60605828-60605847 | Msa1066580:CDS | 50.0% |
| GGGCAATACACATCCAGAGA+AGG | - | chr7_2:60606538-60606557 | Msa1066580:CDS | 50.0% | |
| AACTTGGCATGTCCAATGGG+TGG | - | chr7_2:60607192-60607211 | Msa1066580:CDS | 50.0% | |
| GTCCAATGGGTGGTATATGG+AGG | - | chr7_2:60607202-60607221 | Msa1066580:CDS | 50.0% | |
| TCCCTCCATATACCACCCAT+TGG | + | chr7_2:60607207-60607226 | None:intergenic | 50.0% | |
| CCAAATCTGGTACTCTCCCA+GGG | + | chr7_2:60605301-60605320 | None:intergenic | 50.0% | |
| TCCAAATCTGGTACTCTCCC+AGG | + | chr7_2:60605302-60605321 | None:intergenic | 50.0% | |
| CAACCCCAAAAGGACCAATC+AGG | + | chr7_2:60605449-60605468 | None:intergenic | 50.0% | |
| !!! | CTGATTGGTCCTTTTGGGGT+TGG | - | chr7_2:60605447-60605466 | Msa1066580:intron | 50.0% |
| CTCACGCGCATTATGCAGTT+TGG | + | chr7_2:60605616-60605635 | None:intergenic | 50.0% | |
| CGCGTGAGAAACTTATGGGA+CGG | - | chr7_2:60605628-60605647 | Msa1066580:intron | 50.0% | |
| ! | CCCCACGAAGGTATAAGCTT+AGG | - | chr7_2:60605828-60605847 | Msa1066580:CDS | 50.0% |
| GGGCAATACACATCCAGAGA+AGG | - | chr7_2:60606538-60606557 | Msa1066580:CDS | 50.0% | |
| AACTTGGCATGTCCAATGGG+TGG | - | chr7_2:60607192-60607211 | Msa1066580:CDS | 50.0% | |
| GTCCAATGGGTGGTATATGG+AGG | - | chr7_2:60607202-60607221 | Msa1066580:CDS | 50.0% | |
| TCCCTCCATATACCACCCAT+TGG | + | chr7_2:60607207-60607226 | None:intergenic | 50.0% | |
| !! | CCCTGGGAGAGTACCAGATT+TGG | - | chr7_2:60605298-60605317 | Msa1066580:CDS | 55.0% |
| ACACACATGTGTCCCCACGA+AGG | - | chr7_2:60605816-60605835 | Msa1066580:CDS | 55.0% | |
| CAGAAGAGATCGGCAGAGGA+GGG | - | chr7_2:60607037-60607056 | Msa1066580:CDS | 55.0% | |
| ACTGCTCCTGCAGGTATGGT+TGG | + | chr7_2:60607156-60607175 | None:intergenic | 55.0% | |
| CTCAACTGCTCCTGCAGGTA+TGG | + | chr7_2:60607160-60607179 | None:intergenic | 55.0% | |
| CATACCTGCAGGAGCAGTTG+AGG | - | chr7_2:60607158-60607177 | Msa1066580:CDS | 55.0% | |
| !! | CCCTGGGAGAGTACCAGATT+TGG | - | chr7_2:60605298-60605317 | Msa1066580:CDS | 55.0% |
| ACACACATGTGTCCCCACGA+AGG | - | chr7_2:60605816-60605835 | Msa1066580:CDS | 55.0% | |
| CAGAAGAGATCGGCAGAGGA+GGG | - | chr7_2:60607037-60607056 | Msa1066580:CDS | 55.0% | |
| ACTGCTCCTGCAGGTATGGT+TGG | + | chr7_2:60607156-60607175 | None:intergenic | 55.0% | |
| CTCAACTGCTCCTGCAGGTA+TGG | + | chr7_2:60607160-60607179 | None:intergenic | 55.0% | |
| CATACCTGCAGGAGCAGTTG+AGG | - | chr7_2:60607158-60607177 | Msa1066580:CDS | 55.0% | |
| CAGGCAGAAGAGATCGGCAG+AGG | - | chr7_2:60607033-60607052 | Msa1066580:CDS | 60.0% | |
| GCAGAAGAGATCGGCAGAGG+AGG | - | chr7_2:60607036-60607055 | Msa1066580:CDS | 60.0% | |
| CAGACCTCAACTGCTCCTGC+AGG | + | chr7_2:60607165-60607184 | None:intergenic | 60.0% | |
| CAGGCAGAAGAGATCGGCAG+AGG | - | chr7_2:60607033-60607052 | Msa1066580:CDS | 60.0% | |
| GCAGAAGAGATCGGCAGAGG+AGG | - | chr7_2:60607036-60607055 | Msa1066580:CDS | 60.0% | |
| CAGACCTCAACTGCTCCTGC+AGG | + | chr7_2:60607165-60607184 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 60605008 | 60607352 | 60605008 | ID=Msa1066580;Name=Msa1066580 |
| chr7_2 | mRNA | 60605008 | 60607352 | 60605008 | ID=Msa1066580-mRNA-1;Parent=Msa1066580;Name=Msa1066580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.75|0.6|1|1|1|5|53|385 |
| chr7_2 | exon | 60605008 | 60605324 | 60605008 | ID=Msa1066580-mRNA-1:exon:12009;Parent=Msa1066580-mRNA-1 |
| chr7_2 | exon | 60605801 | 60606011 | 60605801 | ID=Msa1066580-mRNA-1:exon:12008;Parent=Msa1066580-mRNA-1 |
| chr7_2 | exon | 60606306 | 60606370 | 60606306 | ID=Msa1066580-mRNA-1:exon:12007;Parent=Msa1066580-mRNA-1 |
| chr7_2 | exon | 60606459 | 60606644 | 60606459 | ID=Msa1066580-mRNA-1:exon:12006;Parent=Msa1066580-mRNA-1 |
| chr7_2 | exon | 60606921 | 60607352 | 60606921 | ID=Msa1066580-mRNA-1:exon:12005;Parent=Msa1066580-mRNA-1 |
| chr7_2 | CDS | 60606921 | 60607352 | 60606921 | ID=Msa1066580-mRNA-1:cds;Parent=Msa1066580-mRNA-1 |
| chr7_2 | CDS | 60606459 | 60606644 | 60606459 | ID=Msa1066580-mRNA-1:cds;Parent=Msa1066580-mRNA-1 |
| chr7_2 | CDS | 60606306 | 60606370 | 60606306 | ID=Msa1066580-mRNA-1:cds;Parent=Msa1066580-mRNA-1 |
| chr7_2 | CDS | 60605801 | 60606011 | 60605801 | ID=Msa1066580-mRNA-1:cds;Parent=Msa1066580-mRNA-1 |
| chr7_2 | CDS | 60605061 | 60605324 | 60605061 | ID=Msa1066580-mRNA-1:cds;Parent=Msa1066580-mRNA-1 |
| chr7_2 | three_prime_UTR | 60605008 | 60605060 | 60605008 | ID=Msa1066580-mRNA-1:three_prime_utr;Parent=Msa1066580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
