AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1067610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067610 MtrunA17_Chr7g0248721 95.434 219 9 1 1 219 1 218 3.91e-156 431
Msa1067610 MtrunA17_Chr7g0224801 71.264 87 25 0 129 215 81 167 5.51e-42 140
Msa1067610 MtrunA17_Chr8g0335811 66.265 83 27 1 119 200 132 214 2.41e-35 124
Msa1067610 MtrunA17_Chr8g0386241 50.893 112 52 1 100 211 65 173 2.79e-33 118
Msa1067610 MtrunA17_Chr2g0294231 75.000 72 18 0 127 198 189 260 2.33e-32 120
Msa1067610 MtrunA17_Chr1g0194481 70.130 77 23 0 122 198 139 215 7.20e-32 118
Msa1067610 MtrunA17_Chr5g0443131 72.603 73 20 0 127 199 143 215 8.32e-31 115
Msa1067610 MtrunA17_Chr7g0270191 56.566 99 34 1 100 198 113 202 9.77e-31 114
Msa1067610 MtrunA17_Chr4g0051881 69.863 73 22 0 127 199 164 236 1.11e-30 115
Msa1067610 MtrunA17_Chr3g0129361 60.976 82 31 1 127 207 130 211 4.77e-30 110
Msa1067610 MtrunA17_Chr5g0418781 59.783 92 28 1 106 197 98 180 1.01e-29 111
Msa1067610 MtrunA17_Chr8g0383351 65.278 72 24 1 127 197 145 216 3.14e-29 109
Msa1067610 MtrunA17_Chr3g0129321 55.556 90 37 2 113 199 89 178 1.52e-28 106
Msa1067610 MtrunA17_Chr1g0150801 38.947 190 78 6 11 198 6 159 5.87e-28 103
Msa1067610 MtrunA17_Chr7g0218081 61.039 77 30 0 121 197 390 466 1.55e-27 109
Msa1067610 MtrunA17_Chr7g0218081 59.677 62 24 1 136 197 223 283 6.61e-19 84.7
Msa1067610 MtrunA17_Chr5g0432161 54.444 90 41 0 108 197 388 477 9.84e-27 107
Msa1067610 MtrunA17_Chr5g0432161 56.897 58 24 1 141 198 244 300 1.53e-15 74.7
Msa1067610 MtrunA17_Chr4g0042831 44.167 120 67 0 78 197 215 334 2.22e-26 104
Msa1067610 MtrunA17_Chr4g0042831 53.226 62 29 0 136 197 140 201 3.70e-16 76.3
Msa1067610 MtrunA17_Chr5g0418191 36.709 158 82 2 58 197 219 376 2.26e-26 105
Msa1067610 MtrunA17_Chr5g0418191 48.810 84 38 2 128 207 138 220 6.23e-18 81.6
Msa1067610 MtrunA17_Chr3g0079691 48.598 107 49 1 97 197 445 551 3.65e-26 105
Msa1067610 MtrunA17_Chr3g0079691 62.069 58 21 1 141 198 280 336 1.84e-18 83.6
Msa1067610 MtrunA17_Chr4g0068541 57.831 83 27 1 128 210 195 269 7.76e-26 103
Msa1067610 MtrunA17_Chr8g0383251 50.549 91 40 1 128 218 95 180 4.57e-25 97.1
Msa1067610 MtrunA17_Chr5g0445311 58.974 78 32 0 120 197 343 420 5.91e-25 102
Msa1067610 MtrunA17_Chr5g0445311 58.621 58 23 1 141 198 200 256 1.18e-16 78.2
Msa1067610 MtrunA17_Chr3g0101131 58.974 78 32 0 120 197 394 471 8.94e-25 101
Msa1067610 MtrunA17_Chr3g0101131 54.688 64 28 1 135 198 237 299 2.14e-17 80.1
Msa1067610 MtrunA17_Chr3g0106491 54.023 87 40 0 111 197 335 421 9.93e-25 101
Msa1067610 MtrunA17_Chr3g0106491 58.621 58 23 1 141 198 198 254 1.36e-15 75.1
Msa1067610 MtrunA17_Chr7g0243891 51.579 95 38 1 111 197 336 430 1.02e-24 101
Msa1067610 MtrunA17_Chr7g0243891 56.897 58 24 1 141 198 216 272 2.15e-15 74.3
Msa1067610 MtrunA17_Chr4g0004911 59.211 76 31 0 122 197 317 392 1.57e-24 100
Msa1067610 MtrunA17_Chr4g0004911 55.172 58 26 0 141 198 184 241 2.86e-16 77.0
Msa1067610 MtrunA17_Chr7g0249301 54.545 77 35 0 121 197 272 348 9.22e-24 97.4
Msa1067610 MtrunA17_Chr7g0249301 58.621 58 23 1 140 197 61 117 2.63e-15 73.9
Msa1067610 MtrunA17_Chr7g0249311 51.064 94 46 0 104 197 355 448 2.00e-23 97.8
Msa1067610 MtrunA17_Chr7g0249311 63.158 57 20 1 141 197 179 234 1.08e-17 81.3
Msa1067610 MtrunA17_Chr7g0263531 43.750 112 51 1 98 197 306 417 7.56e-22 92.8
Msa1067610 MtrunA17_Chr7g0263531 62.500 56 20 1 142 197 190 244 2.71e-16 77.0
Msa1067610 MtrunA17_Chr7g0270831 39.568 139 58 3 61 198 161 274 1.65e-21 91.7
Msa1067610 MtrunA17_Chr2g0302391 35.088 171 85 6 58 207 116 281 1.96e-21 91.3
Msa1067610 MtrunA17_Chr3g0099641 50.575 87 39 2 125 207 235 321 2.57e-21 91.3
Msa1067610 MtrunA17_Chr2g0288871 50.000 80 39 1 120 198 284 363 2.75e-21 91.7
Msa1067610 MtrunA17_Chr2g0333851 52.564 78 34 2 124 198 150 227 6.36e-21 89.0
Msa1067610 MtrunA17_Chr6g0485431 50.685 73 35 1 126 197 139 211 8.04e-21 89.0
Msa1067610 MtrunA17_Chr4g0075201 48.750 80 40 1 120 198 246 325 8.12e-21 90.1
Msa1067610 MtrunA17_Chr7g0238921 63.158 57 21 0 141 197 124 180 2.75e-20 87.0
Msa1067610 MtrunA17_Chr5g0447701 54.286 70 32 0 128 197 239 308 6.43e-20 87.0
Msa1067610 MtrunA17_Chr5g0447701 53.226 62 28 1 137 198 88 148 1.66e-14 71.6
Msa1067610 MtrunA17_Chr1g0147881 42.857 98 52 2 108 204 232 326 6.88e-20 86.3
Msa1067610 MtrunA17_Chr4g0025061 44.211 95 49 2 128 218 347 441 2.17e-19 86.3
Msa1067610 MtrunA17_Chr1g0189391 37.097 124 64 3 81 197 38 154 2.28e-19 84.7
Msa1067610 MtrunA17_Chr7g0216891 51.389 72 34 1 128 198 206 277 5.17e-19 85.1
Msa1067610 MtrunA17_Chr2g0322391 46.250 80 42 1 119 197 327 406 5.65e-19 84.7
Msa1067610 MtrunA17_Chr4g0025051 32.164 171 99 4 45 198 223 393 8.54e-19 84.3
Msa1067610 MtrunA17_Chr4g0074001 37.500 128 70 2 80 197 288 415 1.08e-18 84.0
Msa1067610 MtrunA17_Chr1g0188941 46.053 76 41 0 122 197 32 107 1.09e-18 78.2
Msa1067610 MtrunA17_Chr4g0060271 50.667 75 36 1 124 197 238 312 1.11e-18 84.0
Msa1067610 MtrunA17_Chr4g0051181 52.778 72 33 1 128 198 230 301 1.56e-18 83.6
Msa1067610 MtrunA17_Chr4g0053281 44.186 86 44 2 113 197 241 323 4.51e-18 81.3
Msa1067610 MtrunA17_Chr4g0071521 45.783 83 41 2 116 197 223 302 1.82e-17 79.3
Msa1067610 MtrunA17_Chr7g0270051 50.000 72 35 1 142 212 54 125 1.98e-17 78.6
Msa1067610 MtrunA17_Chr4g0001361 47.436 78 38 2 124 198 143 220 3.18e-17 78.6
Msa1067610 MtrunA17_Chr3g0126391 34.532 139 81 3 80 210 67 203 1.31e-16 77.0
Msa1067610 MtrunA17_Chr1g0150281 54.098 61 27 1 142 201 141 201 1.97e-16 76.3
Msa1067610 MtrunA17_Chr5g0401821 39.806 103 49 3 96 197 166 256 5.83e-16 74.7
Msa1067610 MtrunA17_Chr1g0150271 51.667 60 28 1 139 197 99 158 6.08e-16 74.3
Msa1067610 MtrunA17_Chr3g0136961 47.368 76 37 2 125 197 120 195 8.71e-16 74.3
Msa1067610 MtrunA17_Chr1g0184691 43.373 83 43 2 116 197 271 350 1.04e-15 74.7
Msa1067610 MtrunA17_Chr2g0315361 50.769 65 29 1 134 195 141 205 2.43e-15 73.2
Msa1067610 MtrunA17_Chr8g0387501 50.769 65 31 1 135 198 123 187 2.89e-15 72.8
Msa1067610 MtrunA17_Chr8g0387981 42.056 107 43 5 97 195 94 189 3.82e-15 73.2
Msa1067610 MtrunA17_Chr2g0293481 41.860 86 47 3 116 198 240 325 5.35e-15 73.2
Msa1067610 MtrunA17_Chr5g0447711 40.506 79 47 0 119 197 208 286 6.60e-15 72.0
Msa1067610 MtrunA17_Chr5g0447711 41.176 68 37 2 133 198 73 139 2.74e-11 62.0
Msa1067610 MtrunA17_Chr7g0248691 41.667 84 40 2 116 198 137 212 1.36e-14 71.2
Msa1067610 MtrunA17_Chr8g0347251 40.964 83 41 2 121 195 111 193 2.64e-14 70.9
Msa1067610 MtrunA17_Chr7g0275531 52.542 59 25 1 140 195 117 175 8.64e-14 68.9
Msa1067610 MtrunA17_Chr8g0348311 46.875 64 33 1 136 198 150 213 1.27e-13 68.6
Msa1067610 MtrunA17_Chr8g0379461 49.123 57 28 1 142 197 77 133 1.29e-13 67.8
Msa1067610 MtrunA17_Chr1g0202461 45.312 64 34 1 135 197 255 318 1.33e-13 68.9
Msa1067610 MtrunA17_Chr2g0284321 49.123 57 28 1 142 197 36 92 1.41e-13 67.0
Msa1067610 MtrunA17_Chr8g0334541 51.562 64 26 2 141 201 103 164 1.43e-13 68.2
Msa1067610 MtrunA17_Chr3g0139021 39.759 83 46 2 116 197 292 371 1.50e-13 68.9
Msa1067610 MtrunA17_Chr7g0228941 38.542 96 53 4 119 213 33 123 2.28e-13 64.7
Msa1067610 MtrunA17_Chr4g0024391 41.667 72 41 1 128 198 216 287 2.52e-13 68.2
Msa1067610 MtrunA17_Chr2g0315381 36.937 111 55 4 108 205 101 209 2.67e-13 67.8
Msa1067610 MtrunA17_Chr7g0244981 50.000 58 26 1 141 195 122 179 2.98e-13 67.4
Msa1067610 MtrunA17_Chr5g0432071 50.877 57 27 1 141 197 104 159 6.27e-13 65.5
Msa1067610 MtrunA17_Chr3g0128671 32.061 131 74 4 85 205 67 192 7.86e-13 66.2
Msa1067610 MtrunA17_Chr8g0350621 34.343 99 52 3 115 202 77 173 9.61e-13 65.5
Msa1067610 MtrunA17_Chr2g0289181 43.548 62 34 1 137 197 10 71 2.34e-12 63.9
Msa1067610 MtrunA17_Chr7g0244971 43.077 65 34 1 134 195 116 180 3.70e-12 64.3
Msa1067610 MtrunA17_Chr2g0315371 40.741 81 42 3 118 195 121 198 3.77e-12 64.3
Msa1067610 MtrunA17_Chr2g0319961 49.123 57 28 1 142 197 81 137 6.51e-12 63.2
Msa1067610 MtrunA17_Chr5g0428351 44.444 63 32 1 136 195 178 240 1.52e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1067610 AT5G41570.1 72.174 115 24 1 105 219 70 176 9.53e-58 181
Msa1067610 AT1G64000.1 73.529 102 27 0 118 219 91 192 5.93e-55 174
Msa1067610 AT2G46130.1 78.571 98 21 0 122 219 11 108 7.72e-54 168
Msa1067610 AT2G46130.2 74.490 98 21 1 122 219 11 104 3.10e-48 154
Msa1067610 AT5G13080.1 68.478 92 29 0 128 219 54 145 3.06e-42 140
Msa1067610 AT2G44745.1 64.557 79 28 0 119 197 123 201 6.38e-34 121
Msa1067610 AT3G01970.1 59.551 89 36 0 128 216 52 140 7.55e-33 116
Msa1067610 AT1G69310.4 51.667 120 52 2 78 197 90 203 1.58e-31 117
Msa1067610 AT1G69310.2 51.667 120 52 2 78 197 90 203 1.58e-31 117
Msa1067610 AT1G69310.1 51.667 120 52 2 78 197 90 203 1.58e-31 117
Msa1067610 AT4G18170.1 63.529 85 27 1 118 198 145 229 4.77e-31 116
Msa1067610 AT1G29860.1 73.239 71 19 0 128 198 123 193 1.70e-30 114
Msa1067610 AT5G46350.1 40.323 186 85 4 28 198 66 240 2.47e-30 114
Msa1067610 AT5G49520.1 74.648 71 18 0 128 198 208 278 8.66e-30 114
Msa1067610 AT2G03340.1 44.275 131 69 1 71 197 341 471 3.80e-29 114
Msa1067610 AT2G03340.1 56.061 66 28 1 132 197 241 305 7.07e-18 82.0
Msa1067610 AT4G39410.1 59.494 79 32 0 119 197 201 279 8.15e-29 110
Msa1067610 AT2G47260.1 59.783 92 28 1 106 197 148 230 3.08e-28 109
Msa1067610 AT1G13960.1 38.710 155 89 2 49 197 311 465 2.18e-26 106
Msa1067610 AT1G13960.1 58.065 62 25 1 136 197 224 284 2.45e-17 80.5
Msa1067610 AT2G38470.1 53.398 103 40 1 103 197 316 418 2.83e-26 105
Msa1067610 AT2G38470.1 56.897 58 24 1 141 198 184 240 3.05e-14 71.2
Msa1067610 AT1G13960.2 38.710 155 89 2 49 197 158 312 3.31e-26 104
Msa1067610 AT1G13960.2 58.065 62 25 1 136 197 71 131 8.23e-17 78.2
Msa1067610 AT1G69310.3 48.333 120 52 3 78 197 90 199 4.98e-26 102
Msa1067610 AT5G64810.1 49.438 89 43 1 111 197 78 166 2.75e-25 98.2
Msa1067610 AT2G04880.2 51.648 91 39 1 112 197 249 339 2.98e-25 102
Msa1067610 AT2G04880.2 55.000 60 26 1 139 198 109 167 6.77e-16 76.3
Msa1067610 AT2G04880.1 51.648 91 39 1 112 197 273 363 3.64e-25 102
Msa1067610 AT2G04880.1 55.000 60 26 1 139 198 109 167 7.14e-16 76.3
Msa1067610 AT3G62340.1 56.471 85 37 0 119 203 96 180 4.49e-25 99.8
Msa1067610 AT5G56270.1 53.191 94 44 0 104 197 450 543 4.63e-25 102
Msa1067610 AT5G56270.1 59.649 57 22 1 141 197 273 328 1.44e-16 78.2
Msa1067610 AT5G26170.1 60.000 70 28 0 128 197 100 169 5.75e-25 96.7
Msa1067610 AT4G26640.5 59.211 76 31 0 122 197 186 261 6.04e-25 100
Msa1067610 AT4G26640.5 58.333 60 24 1 139 198 33 91 3.98e-17 79.3
Msa1067610 AT4G26640.6 59.211 76 31 0 122 197 186 261 6.04e-25 100
Msa1067610 AT4G26640.6 58.333 60 24 1 139 198 33 91 3.98e-17 79.3
Msa1067610 AT4G26640.4 59.211 76 31 0 122 197 186 261 6.04e-25 100
Msa1067610 AT4G26640.4 58.333 60 24 1 139 198 33 91 3.98e-17 79.3
Msa1067610 AT4G26640.3 59.211 76 31 0 122 197 186 261 6.04e-25 100
Msa1067610 AT4G26640.3 58.333 60 24 1 139 198 33 91 3.98e-17 79.3
Msa1067610 AT4G26640.7 59.211 76 31 0 122 197 322 397 6.68e-25 102
Msa1067610 AT4G26640.7 58.333 60 24 1 139 198 169 227 2.81e-17 80.1
Msa1067610 AT4G26640.1 59.211 76 31 0 122 197 290 365 7.33e-25 101
Msa1067610 AT4G26640.1 58.333 60 24 1 139 198 137 195 3.26e-17 80.1
Msa1067610 AT4G26640.2 59.211 76 31 0 122 197 362 437 7.86e-25 102
Msa1067610 AT4G26640.2 58.333 60 24 1 139 198 209 267 2.78e-17 80.5
Msa1067610 AT3G01080.2 57.895 76 32 0 122 197 325 400 8.35e-25 101
Msa1067610 AT3G01080.2 57.377 61 25 1 137 197 201 260 1.67e-16 77.8
Msa1067610 AT3G01080.1 57.895 76 32 0 122 197 287 362 1.16e-24 100
Msa1067610 AT3G01080.1 57.377 61 25 1 137 197 163 222 2.80e-16 77.0
Msa1067610 AT2G30250.1 58.974 78 32 0 120 197 307 384 6.20e-24 98.6
Msa1067610 AT2G30250.1 41.772 79 40 2 120 198 150 222 5.05e-13 67.8
Msa1067610 AT5G07100.1 45.299 117 61 1 81 197 177 290 6.91e-24 97.1
Msa1067610 AT5G07100.1 45.714 70 38 0 129 198 105 174 2.29e-14 70.9
Msa1067610 AT5G07100.2 45.299 117 61 1 81 197 84 197 8.81e-24 94.7
Msa1067610 AT5G07100.2 45.714 70 38 0 129 198 12 81 2.26e-14 69.7
Msa1067610 AT5G07100.4 45.299 117 61 1 81 197 84 197 8.81e-24 94.7
Msa1067610 AT5G07100.4 45.714 70 38 0 129 198 12 81 2.26e-14 69.7
Msa1067610 AT5G07100.5 45.299 117 61 1 81 197 84 197 8.81e-24 94.7
Msa1067610 AT5G07100.5 45.714 70 38 0 129 198 12 81 2.26e-14 69.7
Msa1067610 AT5G07100.3 45.299 117 61 1 81 197 84 197 8.81e-24 94.7
Msa1067610 AT5G07100.3 45.714 70 38 0 129 198 12 81 2.26e-14 69.7
Msa1067610 AT4G26440.1 51.064 94 46 0 104 197 335 428 2.80e-23 97.8
Msa1067610 AT4G26440.1 59.649 57 22 1 141 197 178 233 1.91e-16 77.8
Msa1067610 AT1G55600.1 53.846 78 36 0 122 199 288 365 3.56e-23 97.1
Msa1067610 AT4G04450.2 47.126 87 45 1 113 198 170 256 1.69e-21 92.0
Msa1067610 AT1G62300.1 51.250 80 38 1 120 198 291 370 2.98e-21 91.7
Msa1067610 AT4G04450.1 47.126 87 45 1 113 198 264 350 6.49e-21 90.9
Msa1067610 AT4G22070.4 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1067610 AT4G22070.3 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1067610 AT4G22070.2 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1067610 AT4G22070.1 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1067610 AT2G37260.2 40.351 114 64 1 84 197 214 323 3.69e-20 87.4
Msa1067610 AT2G37260.2 52.703 74 33 2 125 197 66 138 7.27e-16 75.5
Msa1067610 AT2G37260.3 40.351 114 64 1 84 197 216 325 3.73e-20 87.4
Msa1067610 AT2G37260.3 52.703 74 33 2 125 197 68 140 6.94e-16 75.5
Msa1067610 AT2G37260.1 40.351 114 64 1 84 197 296 405 4.82e-20 87.8
Msa1067610 AT2G37260.1 52.703 74 33 2 125 197 148 220 7.23e-16 75.9
Msa1067610 AT5G43290.1 49.333 75 37 1 124 197 96 170 5.39e-20 85.9
Msa1067610 AT1G18860.1 52.500 80 33 2 120 198 222 297 5.39e-20 88.2
Msa1067610 AT2G24570.1 38.532 109 63 2 108 215 213 318 1.41e-19 85.5
Msa1067610 AT4G01720.1 54.167 72 32 1 128 198 226 297 2.58e-19 86.3
Msa1067610 AT2G21900.1 40.196 102 54 2 105 203 74 171 3.20e-19 82.4
Msa1067610 AT1G80840.1 48.052 77 37 2 125 198 128 204 4.80e-19 84.0
Msa1067610 AT1G68150.1 52.778 72 33 1 128 198 222 293 6.89e-19 84.3
Msa1067610 AT5G15130.2 36.879 141 80 4 58 197 110 242 1.19e-18 84.3
Msa1067610 AT5G15130.1 36.879 141 80 4 58 197 152 284 1.42e-18 84.0
Msa1067610 AT4G31550.1 31.461 178 110 5 32 207 146 313 1.46e-18 82.8
Msa1067610 AT2G25000.2 46.154 78 41 1 121 197 83 160 3.09e-18 80.5
Msa1067610 AT2G25000.4 46.154 78 41 1 121 197 83 160 3.09e-18 80.5
Msa1067610 AT5G28650.1 39.806 103 55 3 96 197 223 319 4.05e-18 81.6
Msa1067610 AT2G25000.3 46.154 78 41 1 121 197 105 182 4.78e-18 80.5
Msa1067610 AT4G30935.1 46.154 78 42 0 120 197 310 387 5.38e-18 82.4
Msa1067610 AT2G25000.1 46.154 78 41 1 121 197 126 203 7.42e-18 80.1
Msa1067610 AT2G30590.1 44.048 84 43 2 116 198 291 371 1.36e-17 80.5
Msa1067610 AT3G04670.1 39.806 103 55 3 96 197 223 319 2.77e-17 79.3
Msa1067610 AT4G31550.2 39.785 93 52 2 116 207 223 312 3.18e-17 79.3
Msa1067610 AT4G24240.1 37.097 124 63 4 85 207 237 346 3.73e-17 79.3
Msa1067610 AT3G01080.3 57.377 61 25 1 137 197 201 260 4.03e-17 79.0
Msa1067610 AT4G31800.2 52.542 59 27 1 140 197 110 168 7.24e-17 77.0
Msa1067610 AT2G34830.1 40.367 109 61 4 93 198 166 273 1.06e-16 78.6
Msa1067610 AT4G31800.1 52.542 59 27 1 140 197 175 233 1.09e-16 77.4
Msa1067610 AT2G34830.2 40.367 109 61 4 93 198 175 282 1.14e-16 78.2
Msa1067610 AT2G23320.1 33.333 138 57 6 61 197 194 297 6.57e-16 75.5
Msa1067610 AT5G24110.1 42.529 87 40 3 120 196 85 171 9.07e-16 74.7
Msa1067610 AT1G69810.2 37.500 128 62 5 74 198 92 204 1.29e-15 74.7
Msa1067610 AT1G69810.1 37.500 128 62 5 74 198 150 262 1.71e-15 74.7
Msa1067610 AT1G30650.1 37.815 119 69 5 83 198 159 275 2.16e-15 74.7
Msa1067610 AT5G45050.4 35.000 160 68 6 55 207 978 1108 5.73e-15 73.9
Msa1067610 AT5G45050.1 35.000 160 68 6 55 207 1117 1247 6.15e-15 73.6
Msa1067610 AT5G45260.1 42.169 83 36 3 119 198 1195 1268 7.16e-15 73.6
Msa1067610 AT5G45050.2 35.000 160 68 6 55 207 1089 1219 7.55e-15 73.6
Msa1067610 AT2G40740.1 48.571 70 33 1 130 196 162 231 8.63e-15 72.0
Msa1067610 AT2G40740.3 49.275 69 32 1 130 195 171 239 1.14e-14 71.6
Msa1067610 AT4G23810.1 43.038 79 40 2 134 209 151 227 1.22e-14 72.0
Msa1067610 AT3G56400.1 47.143 70 32 2 139 205 118 185 3.84e-14 70.1
Msa1067610 AT1G29280.1 41.111 90 49 3 113 198 43 132 4.16e-14 69.7
Msa1067610 AT4G01250.1 44.444 72 39 1 142 212 129 200 1.36e-13 68.6
Msa1067610 AT2G46400.1 44.706 85 41 3 121 202 85 166 1.46e-13 68.6
Msa1067610 AT5G52830.1 47.619 63 32 1 137 198 161 223 1.50e-13 68.9
Msa1067610 AT4G12020.3 44.595 74 40 1 124 197 451 523 2.54e-13 68.9
Msa1067610 AT4G12020.10 44.595 74 40 1 124 197 451 523 2.59e-13 68.9
Msa1067610 AT4G12020.4 44.595 74 40 1 124 197 451 523 2.61e-13 68.9
Msa1067610 AT4G12020.2 44.595 74 40 1 124 197 451 523 2.64e-13 68.9
Msa1067610 AT4G12020.5 44.595 74 40 1 124 197 384 456 2.70e-13 68.9
Msa1067610 AT4G12020.7 44.595 74 40 1 124 197 451 523 2.94e-13 68.9
Msa1067610 AT4G12020.6 44.595 74 40 1 124 197 451 523 2.96e-13 68.9
Msa1067610 AT4G12020.8 44.595 74 40 1 124 197 451 523 2.96e-13 68.9
Msa1067610 AT4G12020.1 44.595 74 40 1 124 197 451 523 2.97e-13 68.9
Msa1067610 AT4G12020.9 44.595 74 40 1 124 197 451 523 2.97e-13 68.9
Msa1067610 AT4G12020.11 44.595 74 40 1 124 197 451 523 4.99e-13 68.2
Msa1067610 AT3G58710.1 39.000 100 57 3 103 198 30 129 5.22e-13 66.6
Msa1067610 AT3G58710.2 51.724 58 27 1 142 198 71 128 5.43e-13 66.6
Msa1067610 AT4G11070.2 42.169 83 40 2 121 195 84 166 6.00e-13 66.6
Msa1067610 AT4G11070.1 42.169 83 40 2 121 195 116 198 8.41e-13 66.6
Msa1067610 AT1G66560.1 50.000 58 26 1 141 195 103 160 1.04e-12 65.9
Msa1067610 AT2G40750.1 39.326 89 50 2 111 195 121 209 1.11e-12 66.6
Msa1067610 AT4G23550.1 46.774 62 32 1 137 197 136 197 1.16e-12 66.2
Msa1067610 AT5G01900.1 38.298 94 51 2 105 195 78 167 3.01e-12 64.7
Msa1067610 AT5G22570.1 41.333 75 41 1 135 206 104 178 5.83e-12 63.9
Msa1067610 AT1G66550.2 46.552 58 28 1 141 195 103 160 3.28e-11 61.6
Msa1067610 AT1G66550.1 46.552 58 28 1 141 195 108 165 3.90e-11 61.2
Msa1067610 AT1G66600.1 47.458 59 28 1 140 195 102 160 7.58e-11 60.5

Find 50 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCATCTTCTTCTAATT+TGG 0.109939 7_2:+62364927 Msa1067610:CDS
AAGAAGTGTTGATGATATTT+TGG 0.221201 7_2:+62365080 Msa1067610:CDS
ACAACAATAACTTGCTTGTT+GGG 0.273574 7_2:+62364863 Msa1067610:CDS
GGTGATGGTATATTCATTAA+TGG 0.285795 7_2:-62364715 None:intergenic
CACCACAATGCTAGTATCTT+TGG 0.301892 7_2:-62367952 None:intergenic
GGTTATCGTTGGAGGAAATA+TGG 0.317694 7_2:+62365108 Msa1067610:CDS
AACAACAATAACTTGCTTGT+TGG 0.348151 7_2:+62364862 Msa1067610:CDS
AATGGTGGTGGTGGGTTTAG+TGG 0.352349 7_2:-62364697 None:intergenic
GAAACAAGTTAGAGGAGAAA+AGG 0.356863 7_2:+62365001 Msa1067610:CDS
TTAGAGGAGAAAAGGGTTAG+AGG 0.362096 7_2:+62365009 Msa1067610:CDS
TTCTTTACAAAATTACCCTT+TGG 0.387629 7_2:+62364783 Msa1067610:CDS
AGAAAAGGGAAACAAGTTAG+AGG 0.399768 7_2:+62364993 Msa1067610:CDS
GTGGTGGGTTTAGTGGGTCT+TGG 0.400902 7_2:-62364690 None:intergenic
ATGGTGGTGGTGGGTTTAGT+GGG 0.416027 7_2:-62364696 None:intergenic
TCAACTACATGAAGAAGAAA+AGG 0.419090 7_2:+62364978 Msa1067610:CDS
AAACAAGTTAGAGGAGAAAA+GGG 0.432866 7_2:+62365002 Msa1067610:CDS
ATATTCATTAATGGTGGTGG+TGG 0.437732 7_2:-62364706 None:intergenic
GAATCTCAAGATCAAGGTCT+TGG 0.448496 7_2:+62364805 Msa1067610:CDS
TGGATGATGGTTATCGTTGG+AGG 0.458848 7_2:+62365100 Msa1067610:CDS
AAAGAAGGTGTGAAGAAGAA+GGG 0.464186 7_2:-62364766 None:intergenic
GTAATTCAAAATAATGAAAG+TGG 0.470864 7_2:+62364949 Msa1067610:CDS
TAAAGAAGGTGTGAAGAAGA+AGG 0.475260 7_2:-62364767 None:intergenic
AGGAGAAAAGGGTTAGAGGT+GGG 0.487742 7_2:+62365013 Msa1067610:CDS
CCTTTGGAATCTCAAGATCA+AGG 0.488132 7_2:+62364799 Msa1067610:CDS
CACATGCAACGTGAAGAAAC+AGG 0.504608 7_2:+62367917 Msa1067610:CDS
AACTGTATTTGCTTTAGAAG+AGG 0.505645 7_2:-62368032 None:intergenic
CTTGCTTGTTGGGGATGCTA+AGG 0.508570 7_2:+62364873 Msa1067610:CDS
CAACTACATGAAGAAGAAAA+GGG 0.514940 7_2:+62364979 Msa1067610:CDS
GTTTCCATCAGCTTCTCGCA+TGG 0.515796 7_2:-62368002 None:intergenic
TTTCCATCAGCTTCTCGCAT+GGG 0.522203 7_2:-62368001 None:intergenic
AAGAAGGTGTGAAGAAGAAG+GGG 0.524889 7_2:-62364765 None:intergenic
TATTCATTAATGGTGGTGGT+GGG 0.530475 7_2:-62364705 None:intergenic
GAGGAGAAAAGGGTTAGAGG+TGG 0.538687 7_2:+62365012 Msa1067610:CDS
CAACAATAACTTGCTTGTTG+GGG 0.541537 7_2:+62364864 Msa1067610:CDS
CTTGATCTTGAGATTCCAAA+GGG 0.545457 7_2:-62364798 None:intergenic
CCATCAGCTTCTCGCATGGG+TGG 0.547684 7_2:-62367998 None:intergenic
GGTATATTCATTAATGGTGG+TGG 0.558354 7_2:-62364709 None:intergenic
CTTGTCTGAAATGCAAACCT+TGG 0.566555 7_2:-62365060 None:intergenic
TCAAGAACAGCAAGTATCCC+AGG 0.569780 7_2:+62365142 Msa1067610:CDS
ATTGTGGTGACTACTTATGA+AGG 0.571435 7_2:+62367966 Msa1067610:CDS
AGGTCTTGGTGATATTGAGT+GGG 0.577572 7_2:+62364819 Msa1067610:CDS
CCACCCATGCGAGAAGCTGA+TGG 0.580190 7_2:+62367998 Msa1067610:CDS
CCTTGATCTTGAGATTCCAA+AGG 0.594663 7_2:-62364799 None:intergenic
AAGGTCTTGGTGATATTGAG+TGG 0.598654 7_2:+62364818 Msa1067610:CDS
ACGTGAAGAAACAGGTGCAA+AGG 0.603852 7_2:+62367925 Msa1067610:CDS
TAATTCAAAATAATGAAAGT+GGG 0.605922 7_2:+62364950 Msa1067610:CDS
TTCCAAAGATACTAGCATTG+TGG 0.630354 7_2:+62367950 Msa1067610:CDS
GATGGTATATTCATTAATGG+TGG 0.631790 7_2:-62364712 None:intergenic
AAAAGACAACAAAAGTGCCA+AGG 0.641958 7_2:+62365043 Msa1067610:CDS
GGTCTTGGTGATATTGAGTG+GGG 0.698935 7_2:+62364820 Msa1067610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATCTTTACAAAAATAAA+TGG + chr7_2:62365377-62365396 Msa1067610:intron 10.0%
!! ATAATCTTTACAAAAATAAA+TGG + chr7_2:62365644-62365663 Msa1067610:intron 10.0%
!!! TTTAAAATAATTAACTTCAT+TGG - chr7_2:62366270-62366289 None:intergenic 10.0%
!! ATACTAATTAAATTCTTTAT+TGG + chr7_2:62366624-62366643 Msa1067610:intron 10.0%
!! ATTAAACATAAAAAATGATA+GGG + chr7_2:62366700-62366719 Msa1067610:intron 10.0%
!!! GAATTAAATATGATTTTTTT+TGG - chr7_2:62367145-62367164 None:intergenic 10.0%
!! TAATTCAAAATAATGAAAGT+GGG + chr7_2:62364950-62364969 Msa1067610:CDS 15.0%
!! TTAGAAGAATAAATTTAGAA+GGG - chr7_2:62365837-62365856 None:intergenic 15.0%
!! TTTAGAAGAATAAATTTAGA+AGG - chr7_2:62365838-62365857 None:intergenic 15.0%
!!! TAATAAATTTTCCATTTGTT+TGG + chr7_2:62365947-62365966 Msa1067610:intron 15.0%
!! TGTTTGATAAAATTAAATGT+TGG - chr7_2:62366087-62366106 None:intergenic 15.0%
!! AAAGACAAATACTTTATATA+AGG + chr7_2:62366366-62366385 Msa1067610:intron 15.0%
!! AAGACAAATACTTTATATAA+GGG + chr7_2:62366367-62366386 Msa1067610:intron 15.0%
!! GATTAAACATAAAAAATGAT+AGG + chr7_2:62366699-62366718 Msa1067610:intron 15.0%
!! AAGATAAAATTAACAAAATC+TGG - chr7_2:62366964-62366983 None:intergenic 15.0%
!!! TGAATTTTTTAAAATGACAA+AGG - chr7_2:62366990-62367009 None:intergenic 15.0%
!! TACAAAAATTTAAGAGTTTA+AGG + chr7_2:62367241-62367260 Msa1067610:intron 15.0%
!!! TAGAAGTAATTTTTTTTTGT+AGG + chr7_2:62367301-62367320 Msa1067610:intron 15.0%
!!! AGAAGTAATTTTTTTTTGTA+GGG + chr7_2:62367302-62367321 Msa1067610:intron 15.0%
!! AAACCTATTAAAATTAAGTA+AGG + chr7_2:62367331-62367350 Msa1067610:intron 15.0%
!!! AATCCTTACTTAATTTTAAT+AGG - chr7_2:62367337-62367356 None:intergenic 15.0%
!! TTAAAATTTATAAACTATCG+AGG - chr7_2:62367605-62367624 None:intergenic 15.0%
!!! CGATAGTTTATAAATTTTAA+CGG + chr7_2:62367605-62367624 Msa1067610:intron 15.0%
!! GTAATTCAAAATAATGAAAG+TGG + chr7_2:62364949-62364968 Msa1067610:CDS 20.0%
!!! TTTGTTAAGTTTGAAATTGA+GGG - chr7_2:62365233-62365252 None:intergenic 20.0%
!!! TTTTGTTAAGTTTGAAATTG+AGG - chr7_2:62365234-62365253 None:intergenic 20.0%
!! AGATGTATATTACATTTCTA+AGG + chr7_2:62365303-62365322 Msa1067610:intron 20.0%
!! ATCTTTACAAAAATAAATGG+AGG + chr7_2:62365380-62365399 Msa1067610:intron 20.0%
!! TCTTTACAAAAATAAATGGA+GGG + chr7_2:62365381-62365400 Msa1067610:intron 20.0%
!!! TACAATTTTAGAGAAGAAAT+TGG - chr7_2:62365502-62365521 None:intergenic 20.0%
!!! AATTTCTTCTCTAAAATTGT+AGG + chr7_2:62365501-62365520 Msa1067610:intron 20.0%
!! GTAAAGATTATAAATGACAA+TGG - chr7_2:62365635-62365654 None:intergenic 20.0%
!! ATCTTTACAAAAATAAATGG+AGG + chr7_2:62365380-62365399 Msa1067610:intron 20.0%
!! TCTTTACAAAAATAAATGGA+GGG + chr7_2:62365381-62365400 Msa1067610:intron 20.0%
!!! ATTATTTAAGATCAAGATAC+AGG - chr7_2:62365861-62365880 None:intergenic 20.0%
!!! GTTTAATTTAAGTAGGTTAA+AGG + chr7_2:62366036-62366055 Msa1067610:intron 20.0%
!! CCTTAGTTTAAAAAATATTG+TGG - chr7_2:62366188-62366207 None:intergenic 20.0%
!!! CCACAATATTTTTTAAACTA+AGG + chr7_2:62366185-62366204 Msa1067610:intron 20.0%
!!! TTTTTGTTCCCTATAAAATT+GGG + chr7_2:62366732-62366751 Msa1067610:intron 20.0%
!! AAGTAATGACTAAACTTAAA+AGG - chr7_2:62366759-62366778 None:intergenic 20.0%
!!! TGAGTGCATAAATTTTTTTA+GGG - chr7_2:62366803-62366822 None:intergenic 20.0%
!! AATTAAACAAATTTGAACTG+AGG - chr7_2:62366838-62366857 None:intergenic 20.0%
!! AAAAAATTGTTCAAAAACTC+AGG - chr7_2:62366873-62366892 None:intergenic 20.0%
!!! GATATTACATTTTATATGCA+GGG + chr7_2:62367045-62367064 Msa1067610:intron 20.0%
!!! ATATTACATTTTATATGCAG+GGG + chr7_2:62367046-62367065 Msa1067610:intron 20.0%
!! ATTAAGTAAGGATTAAACTT+AGG + chr7_2:62367343-62367362 Msa1067610:intron 20.0%
!!! CATAAATGTCATATCATTTT+GGG - chr7_2:62367405-62367424 None:intergenic 20.0%
!!! TCATAAATGTCATATCATTT+TGG - chr7_2:62367406-62367425 None:intergenic 20.0%
!!! AAATGATCAATATCTCTTTT+AGG + chr7_2:62367690-62367709 Msa1067610:intron 20.0%
!!! ATTTTACCAATGCAAATTTA+TGG - chr7_2:62367867-62367886 None:intergenic 20.0%
!! AAAGGGTAATTTTGTAAAGA+AGG - chr7_2:62364784-62364803 None:intergenic 25.0%
! TTCTTTACAAAATTACCCTT+TGG + chr7_2:62364783-62364802 Msa1067610:CDS 25.0%
!!! AAGAAGTGTTGATGATATTT+TGG + chr7_2:62365080-62365099 Msa1067610:CDS 25.0%
! ATGTTTGTGAAATCATCATT+TGG + chr7_2:62365179-62365198 Msa1067610:intron 25.0%
!!! TATTTTGTTTGCCAAACAAA+TGG - chr7_2:62365961-62365980 None:intergenic 25.0%
! GCTCGTATAAAAGATTAATT+TGG + chr7_2:62365994-62366013 Msa1067610:intron 25.0%
!!! AATTTGGTAACCATCATTTT+CGG + chr7_2:62366010-62366029 Msa1067610:intron 25.0%
! ATTAAACTTACCGAAAATGA+TGG - chr7_2:62366023-62366042 None:intergenic 25.0%
!! TCGGTAAGTTTAATTTAAGT+AGG + chr7_2:62366029-62366048 Msa1067610:intron 25.0%
!! ATTATTTGCTACCTTTATTG+AGG + chr7_2:62366433-62366452 Msa1067610:intron 25.0%
! CTAATTAAACTCCTCAATAA+AGG - chr7_2:62366447-62366466 None:intergenic 25.0%
!! TATTTTACACATGCATTCAA+TGG + chr7_2:62366488-62366507 Msa1067610:intron 25.0%
!! GTTTTTGTTCCCTATAAAAT+TGG + chr7_2:62366731-62366750 Msa1067610:intron 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG - chr7_2:62366743-62366762 None:intergenic 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG - chr7_2:62366744-62366763 None:intergenic 25.0%
!!! CTGAGTGCATAAATTTTTTT+AGG - chr7_2:62366804-62366823 None:intergenic 25.0%
!! GGATATTACATTTTATATGC+AGG + chr7_2:62367044-62367063 Msa1067610:intron 25.0%
!! GTTTAGAATAGTACTATGAA+AGG - chr7_2:62367205-62367224 None:intergenic 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr7_2:62367373-62367392 None:intergenic 25.0%
!!! TTTTGGGTTAAATGTGTTTT+TGG - chr7_2:62367389-62367408 None:intergenic 25.0%
! GACATTTATGATTGAATGAT+TGG + chr7_2:62367415-62367434 Msa1067610:intron 25.0%
!! CTTAGAGAAAGAGTATAATT+TGG - chr7_2:62367484-62367503 None:intergenic 25.0%
! AGTGAAACTAAGAGAAAAAT+AGG + chr7_2:62367636-62367655 Msa1067610:intron 25.0%
! GTGAAACTAAGAGAAAAATA+GGG + chr7_2:62367637-62367656 Msa1067610:intron 25.0%
GATGGTATATTCATTAATGG+TGG - chr7_2:62364715-62364734 None:intergenic 30.0%
! GGTGATGGTATATTCATTAA+TGG - chr7_2:62364718-62364737 None:intergenic 30.0%
!! AACAACAATAACTTGCTTGT+TGG + chr7_2:62364862-62364881 Msa1067610:CDS 30.0%
!! ACAACAATAACTTGCTTGTT+GGG + chr7_2:62364863-62364882 Msa1067610:CDS 30.0%
CACTTCATCTTCTTCTAATT+TGG + chr7_2:62364927-62364946 Msa1067610:CDS 30.0%
TCAACTACATGAAGAAGAAA+AGG + chr7_2:62364978-62364997 Msa1067610:CDS 30.0%
CAACTACATGAAGAAGAAAA+GGG + chr7_2:62364979-62364998 Msa1067610:CDS 30.0%
AAACAAGTTAGAGGAGAAAA+GGG + chr7_2:62365002-62365021 Msa1067610:CDS 30.0%
!!! GTTGATGATATTTTGGATGA+TGG + chr7_2:62365087-62365106 Msa1067610:CDS 30.0%
CATACATGTAGTATATACCT+GGG - chr7_2:62365162-62365181 None:intergenic 30.0%
ACATACATGTAGTATATACC+TGG - chr7_2:62365163-62365182 None:intergenic 30.0%
!! GACGATTTTGATAAATGTCT+TGG + chr7_2:62365670-62365689 Msa1067610:intron 30.0%
TTAGTGTGACAGTATATCAT+TGG + chr7_2:62366567-62366586 Msa1067610:intron 30.0%
ATTGGTTAGCAATACTCTAT+CGG + chr7_2:62366642-62366661 Msa1067610:intron 30.0%
AAACAAATTTGAACTGAGGA+GGG - chr7_2:62366834-62366853 None:intergenic 30.0%
TAAACAAATTTGAACTGAGG+AGG - chr7_2:62366835-62366854 None:intergenic 30.0%
!!! TTTGCGATAATTTTTTGCAG+AGG - chr7_2:62366926-62366945 None:intergenic 30.0%
GAGCATACACAATTAAATTG+TGG - chr7_2:62367103-62367122 None:intergenic 30.0%
! TTAGGAGTTCCCAATTTTAT+AGG + chr7_2:62367361-62367380 Msa1067610:intron 30.0%
! TAGGAGTTCCCAATTTTATA+GGG + chr7_2:62367362-62367381 Msa1067610:intron 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr7_2:62367374-62367393 None:intergenic 30.0%
AGTATCTATACAAAACTCCA+CGG + chr7_2:62367442-62367461 Msa1067610:intron 30.0%
AGAGATGTAGAAAATAGTGA+TGG - chr7_2:62367549-62367568 None:intergenic 30.0%
!! TTGATCATTTTTCACGTGTT+TGG - chr7_2:62367680-62367699 None:intergenic 30.0%
CTTGATCCATAAATTTGCAT+TGG + chr7_2:62367858-62367877 Msa1067610:intron 30.0%
!! AACTGTATTTGCTTTAGAAG+AGG - chr7_2:62368035-62368054 None:intergenic 30.0%
!! TATTCATTAATGGTGGTGGT+GGG - chr7_2:62364708-62364727 None:intergenic 35.0%
!! ATATTCATTAATGGTGGTGG+TGG - chr7_2:62364709-62364728 None:intergenic 35.0%
GGTATATTCATTAATGGTGG+TGG - chr7_2:62364712-62364731 None:intergenic 35.0%
! AAAGAAGGTGTGAAGAAGAA+GGG - chr7_2:62364769-62364788 None:intergenic 35.0%
! TAAAGAAGGTGTGAAGAAGA+AGG - chr7_2:62364770-62364789 None:intergenic 35.0%
CTTGATCTTGAGATTCCAAA+GGG - chr7_2:62364801-62364820 None:intergenic 35.0%
!! CAACAATAACTTGCTTGTTG+GGG + chr7_2:62364864-62364883 Msa1067610:CDS 35.0%
AGAAAAGGGAAACAAGTTAG+AGG + chr7_2:62364993-62365012 Msa1067610:CDS 35.0%
GAAACAAGTTAGAGGAGAAA+AGG + chr7_2:62365001-62365020 Msa1067610:CDS 35.0%
!! AAAAGACAACAAAAGTGCCA+AGG + chr7_2:62365043-62365062 Msa1067610:CDS 35.0%
!! TTTTGGATGATGGTTATCGT+TGG + chr7_2:62365097-62365116 Msa1067610:CDS 35.0%
!! CTTCTCTAAAATTGTAGGAC+TGG + chr7_2:62365506-62365525 Msa1067610:intron 35.0%
TACCAACTGAACTAAGCTTA+CGG - chr7_2:62367023-62367042 None:intergenic 35.0%
! TAAGCTTAGTTCAGTTGGTA+GGG + chr7_2:62367023-62367042 Msa1067610:intron 35.0%
! TGTAGAAAATAGTGATGGAG+AGG - chr7_2:62367544-62367563 None:intergenic 35.0%
CAACATCGAAGACTGAAAAA+GGG - chr7_2:62367763-62367782 None:intergenic 35.0%
!! TTTTTCAGTCTTCGATGTTG+CGG + chr7_2:62367763-62367782 Msa1067610:intron 35.0%
TTCCAAAGATACTAGCATTG+TGG + chr7_2:62367950-62367969 Msa1067610:CDS 35.0%
ATTGTGGTGACTACTTATGA+AGG + chr7_2:62367966-62367985 Msa1067610:CDS 35.0%
!!! TTGTTTTGAGCTTGTGGTGA+TGG - chr7_2:62364733-62364752 None:intergenic 40.0%
!!! GTGTTGTTGTTTTGAGCTTG+TGG - chr7_2:62364739-62364758 None:intergenic 40.0%
! AAGAAGGTGTGAAGAAGAAG+GGG - chr7_2:62364768-62364787 None:intergenic 40.0%
CCTTGATCTTGAGATTCCAA+AGG - chr7_2:62364802-62364821 None:intergenic 40.0%
!! CCTTTGGAATCTCAAGATCA+AGG + chr7_2:62364799-62364818 Msa1067610:CDS 40.0%
GAATCTCAAGATCAAGGTCT+TGG + chr7_2:62364805-62364824 Msa1067610:CDS 40.0%
! AAGGTCTTGGTGATATTGAG+TGG + chr7_2:62364818-62364837 Msa1067610:CDS 40.0%
! AGGTCTTGGTGATATTGAGT+GGG + chr7_2:62364819-62364838 Msa1067610:CDS 40.0%
!! GAGTGGGGAAACTTTTTCTT+AGG + chr7_2:62364835-62364854 Msa1067610:CDS 40.0%
TTAGAGGAGAAAAGGGTTAG+AGG + chr7_2:62365009-62365028 Msa1067610:CDS 40.0%
! CTTGTCTGAAATGCAAACCT+TGG - chr7_2:62365063-62365082 None:intergenic 40.0%
GGTTATCGTTGGAGGAAATA+TGG + chr7_2:62365108-62365127 Msa1067610:CDS 40.0%
ACCAACTGAACTAAGCTTAC+GGG - chr7_2:62367022-62367041 None:intergenic 40.0%
GTAAGCTTAGTTCAGTTGGT+AGG + chr7_2:62367022-62367041 Msa1067610:intron 40.0%
! TACATTTTATATGCAGGGGC+CGG + chr7_2:62367050-62367069 Msa1067610:intron 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr7_2:62367129-62367148 None:intergenic 40.0%
GCAACATCGAAGACTGAAAA+AGG - chr7_2:62367764-62367783 None:intergenic 40.0%
!! AGTTGTTGACTTCCTCTCTT+TGG + chr7_2:62367806-62367825 Msa1067610:intron 40.0%
ACTTCCTCTCTTTGGTTGAT+TGG + chr7_2:62367814-62367833 Msa1067610:intron 40.0%
CTTCCTCTCTTTGGTTGATT+GGG + chr7_2:62367815-62367834 Msa1067610:intron 40.0%
CACCACAATGCTAGTATCTT+TGG - chr7_2:62367955-62367974 None:intergenic 40.0%
! GGTCTTGGTGATATTGAGTG+GGG + chr7_2:62364820-62364839 Msa1067610:CDS 45.0%
AGGAGAAAAGGGTTAGAGGT+GGG + chr7_2:62365013-62365032 Msa1067610:CDS 45.0%
! TGGATGATGGTTATCGTTGG+AGG + chr7_2:62365100-62365119 Msa1067610:CDS 45.0%
TCAAGAACAGCAAGTATCCC+AGG + chr7_2:62365142-62365161 Msa1067610:CDS 45.0%
CCAACTGAACTAAGCTTACG+GGG - chr7_2:62367021-62367040 None:intergenic 45.0%
! ACATTTTATATGCAGGGGCC+GGG + chr7_2:62367051-62367070 Msa1067610:intron 45.0%
! TTGTGGAGAAGTAGAGTGTC+CGG - chr7_2:62367086-62367105 None:intergenic 45.0%
TTGTGTATGCTCTAGCCACT+AGG + chr7_2:62367111-62367130 Msa1067610:intron 45.0%
GAGATAACACTAAGCTACCG+TGG - chr7_2:62367462-62367481 None:intergenic 45.0%
GATCCCAATCAACCAAAGAG+AGG - chr7_2:62367821-62367840 None:intergenic 45.0%
CACATGCAACGTGAAGAAAC+AGG + chr7_2:62367917-62367936 Msa1067610:CDS 45.0%
ACGTGAAGAAACAGGTGCAA+AGG + chr7_2:62367925-62367944 Msa1067610:CDS 45.0%
TTTCCATCAGCTTCTCGCAT+GGG - chr7_2:62368004-62368023 None:intergenic 45.0%
!! ATGGTGGTGGTGGGTTTAGT+GGG - chr7_2:62364699-62364718 None:intergenic 50.0%
!! AATGGTGGTGGTGGGTTTAG+TGG - chr7_2:62364700-62364719 None:intergenic 50.0%
! CTTGCTTGTTGGGGATGCTA+AGG + chr7_2:62364873-62364892 Msa1067610:CDS 50.0%
GAGGAGAAAAGGGTTAGAGG+TGG + chr7_2:62365012-62365031 Msa1067610:CDS 50.0%
CCCCGTAAGCTTAGTTCAGT+TGG + chr7_2:62367018-62367037 Msa1067610:intron 50.0%
! CATTTTATATGCAGGGGCCG+GGG + chr7_2:62367052-62367071 Msa1067610:intron 50.0%
! TGTGGAGAAGTAGAGTGTCC+GGG - chr7_2:62367085-62367104 None:intergenic 50.0%
GTTTCCATCAGCTTCTCGCA+TGG - chr7_2:62368005-62368024 None:intergenic 50.0%
!! GTGGTGGGTTTAGTGGGTCT+TGG - chr7_2:62364693-62364712 None:intergenic 55.0%
! GTGGAGAAGTAGAGTGTCCG+GGG - chr7_2:62367084-62367103 None:intergenic 55.0%
CCATCAGCTTCTCGCATGGG+TGG - chr7_2:62368001-62368020 None:intergenic 60.0%
CCACCCATGCGAGAAGCTGA+TGG + chr7_2:62367998-62368017 Msa1067610:CDS 60.0%
AGTGTCCGGGGTTCGAACCC+CGG - chr7_2:62367072-62367091 None:intergenic 65.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr7_2:62367064-62367083 Msa1067610:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 62364682 62368070 62364682 ID=Msa1067610;Name=Msa1067610
chr7_2 mRNA 62364682 62368070 62364682 ID=Msa1067610-mRNA-1;Parent=Msa1067610;Name=Msa1067610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|0|0.5|2|0|219
chr7_2 exon 62364682 62365163 62364682 ID=Msa1067610-mRNA-1:exon:12606;Parent=Msa1067610-mRNA-1
chr7_2 exon 62367893 62368070 62367893 ID=Msa1067610-mRNA-1:exon:12607;Parent=Msa1067610-mRNA-1
chr7_2 CDS 62364682 62365163 62364682 ID=Msa1067610-mRNA-1:cds;Parent=Msa1067610-mRNA-1
chr7_2 CDS 62367893 62368070 62367893 ID=Msa1067610-mRNA-1:cds;Parent=Msa1067610-mRNA-1
Gene Sequence

>Msa1067610

ATGGATAGCCAAGACCCACTAAACCCACCACCACCATTAATGAATATACCATCACCACAAGCTCAAAACAACAACACTTCTCTCCCCTTCTTCTTCACACCTTCTTTACAAAATTACCCTTTGGAATCTCAAGATCAAGGTCTTGGTGATATTGAGTGGGGAAACTTTTTCTTAGGTCAAAACAACAATAACTTGCTTGTTGGGGATGCTAAGGAGACATTAAAGATTGACAATATTCAACAATGCACTTCATCTTCTTCTAATTTGGTAATTCAAAATAATGAAAGTGGGAGTTATCAACTACATGAAGAAGAAAAGGGAAACAAGTTAGAGGAGAAAAGGGTTAGAGGTGGGAGAGTGAAAAAGACAACAAAAGTGCCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAACAGCAAGTATCCCAGAAGCTACTATCGATGCACACATCACACATGCAACGTGAAGAAACAGGTGCAAAGGCTTTCCAAAGATACTAGCATTGTGGTGACTACTTATGAAGGAATTCACAACCACCCATGCGAGAAGCTGATGGAAACTCTAACTCCTCTTCTAAAGCAAATACAGTTTCTTGCTAGCTTGTAA
Protein sequence

>Msa1067610

MDSQDPLNPPPPLMNIPSPQAQNNNTSLPFFFTPSLQNYPLESQDQGLGDIEWGNFFLGQNNNNLLVGDAKETLKIDNIQQCTSSSSNLVIQNNESGSYQLHEEEKGNKLEEKRVRGGRVKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSKYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL*