AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0810330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0810330 MtrunA17_Chr5g0426511 86.667 150 8 2 83 226 1 144 2.90e-62 191
Msa0810330 MtrunA17_Chr4g0049951 63.780 127 26 3 83 207 1 109 1.87e-28 104
Msa0810330 MtrunA17_Chr4g0049951 50.000 106 29 4 1 82 1 106 1.12e-14 68.2
Msa0810330 MtrunA17_Chr4g0049911 63.780 127 26 3 83 207 1 109 2.56e-28 103
Msa0810330 MtrunA17_Chr4g0049911 50.943 106 28 4 1 82 1 106 1.15e-15 70.9
Msa0810330 MtrunA17_Chr4g0049921 62.992 127 27 3 83 207 1 109 3.20e-28 103
Msa0810330 MtrunA17_Chr4g0049921 58.140 86 26 3 1 78 1 84 4.29e-16 72.0
Msa0810330 MtrunA17_Chr4g0052441 65.152 66 19 1 17 78 1 66 1.32e-14 66.2
Msa0810330 MtrunA17_Chr4g0052441 50.515 97 11 5 99 191 1 64 2.89e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 78 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGGAATGCTTGGCAAAT+TGG 0.274340 5_3:+38670806 None:intergenic
GATGGGAGTGTTGGATTAGT+AGG 0.289744 5_3:+38661396 None:intergenic
GAAAGGGATGGAGGAGATAA+TGG 0.324144 5_3:+38661317 None:intergenic
GCAAAAGGTTGCGAGCTTCT+AGG 0.340614 5_3:+38670844 None:intergenic
ATTGAAGGCAATGTTGGTTT+TGG 0.363932 5_3:+38661588 None:intergenic
TGAGGCAATGTTGGCATTGA+AGG 0.392675 5_3:+38670687 None:intergenic
ATTGAAGGCAATGTTGGGTT+TGG 0.405055 5_3:+38670780 None:intergenic
GAAGGCAATGTTGGAATAGA+AGG 0.409503 5_3:+38670735 None:intergenic
GGGGTAGAGGTTGAAGGTGG+TGG 0.414326 5_3:+38661288 None:intergenic
TGAGGCAATGTTGGCATTGA+AGG 0.417465 5_3:+38661495 None:intergenic
TTGGGATTGAAGGCAATGTT+GGG 0.420064 5_3:+38670775 None:intergenic
AGTGAATTGGTTGGCAATGG+TGG 0.426352 5_3:+38661363 None:intergenic
GGCAAAGGTGGTAATGTTGT+TGG 0.427772 5_3:+38670756 None:intergenic
GTGGGAATGCTTGGCAAATT+GGG 0.437102 5_3:+38670807 None:intergenic
GAAGGCAAGGTTGGAATAGA+AGG 0.443187 5_3:+38661543 None:intergenic
GCAAAGGTGGCAATGTTGTT+GGG 0.444953 5_3:+38661517 None:intergenic
GCAAAGGTGGCAATGTTGTT+GGG 0.444953 5_3:+38670709 None:intergenic
GGAACATTGCCTTGAGGTTG+AGG 0.447102 5_3:+38661477 None:intergenic
GGCAATGTTGTTGGGATTGA+AGG 0.463586 5_3:+38661525 None:intergenic
GGCAATGTTGTTGGGATTGA+AGG 0.463586 5_3:+38670717 None:intergenic
GTTGGGATTGAAGGCAATGT+TGG 0.464162 5_3:+38670774 None:intergenic
AGGAATGTTGGGAAGTGAAT+TGG 0.464436 5_3:+38661350 None:intergenic
GAAGGTGGTGGAGAGAAGAA+AGG 0.468019 5_3:+38661300 None:intergenic
GGTTGAGATTGAAGGAATGT+TGG 0.470769 5_3:+38661338 None:intergenic
GTTGGATTAGTAGGAATGCT+AGG 0.470882 5_3:+38661405 None:intergenic
GCAAAGGTGGTAATGTTGTT+GGG 0.474204 5_3:+38670757 None:intergenic
GGCAAAGGTGGCAATGTTGT+TGG 0.474544 5_3:+38661564 None:intergenic
GTTGGGATTGAAGGCAAGGT+TGG 0.474567 5_3:+38661534 None:intergenic
GGCAATGTTGTTGGAATTGA+AGG 0.477009 5_3:+38661573 None:intergenic
TTTGGCAAAGTGGGAATGCT+TGG 0.480070 5_3:+38670798 None:intergenic
GTTGTGTGGTTGTTTGCAAA+AGG 0.480622 5_3:+38661619 None:intergenic
GGTAATGTTGTTGGGATTGA+AGG 0.482657 5_3:+38670765 None:intergenic
GTTGTGTAGTTGTTTGCAAA+AGG 0.486177 5_3:+38670829 None:intergenic
GAGATAATGGTTGAGATTGA+AGG 0.488067 5_3:+38661330 None:intergenic
AAGGTGGTGGAGAGAAGAAA+GGG 0.496086 5_3:+38661301 None:intergenic
GTTGGGATTGAAGGCAATGT+TGG 0.497267 5_3:+38670726 None:intergenic
ATGGTGGAAAGTTGAGAGAT+GGG 0.499488 5_3:+38661379 None:intergenic
ACATTACCTTGAGGCAATGT+TGG 0.499704 5_3:+38670678 None:intergenic
GGCAAAGGTGGCAATGTTGT+TGG 0.501336 5_3:+38661516 None:intergenic
GGCAAAGGTGGCAATGTTGT+TGG 0.501336 5_3:+38670708 None:intergenic
GTTGGAATTGAAGGCAATGT+TGG 0.501730 5_3:+38661582 None:intergenic
CCTTGAGGTTGAGGCAATGT+TGG 0.509473 5_3:+38661486 None:intergenic
GTTGAGATTGAAGGAATGTT+GGG 0.510751 5_3:+38661339 None:intergenic
TGGAGAGAAGAAAGGGATGG+AGG 0.512326 5_3:+38661308 None:intergenic
AAGAAGTAAAGATGTGATGA+TGG 0.515143 5_3:+38661680 None:intergenic
CTTCAAGGGGTAGAGGTTGA+AGG 0.516901 5_3:+38661282 None:intergenic
GGAAGTGAATTGGTTGGCAA+TGG 0.525163 5_3:+38661360 None:intergenic
AATGTTGGGTTTGGCAAAGT+GGG 0.535879 5_3:+38670789 None:intergenic
AGTGGTGGCATAGTGAGCTT+AGG 0.545367 5_3:+38661429 None:intergenic
TGGTGGAGAGAAGAAAGGGA+TGG 0.548047 5_3:+38661305 None:intergenic
AAGTTGAGAGATGGGAGTGT+TGG 0.551170 5_3:+38661387 None:intergenic
CAATGTTGGGTTTGGCAAAG+TGG 0.554327 5_3:+38670788 None:intergenic
ATAGTGAGCTTAGGCACTGA+AGG 0.554532 5_3:+38661438 None:intergenic
AAGAAGTAAAGATATGATGA+AGG 0.559406 5_3:+38670890 None:intergenic
TTAGTAGGAATGCTAGGAAG+TGG 0.565420 5_3:+38661411 None:intergenic
GAGCTTAGGCACTGAAGGGA+TGG 0.575148 5_3:+38661443 None:intergenic
TGTTGTTGGGATTGAAGGCA+AGG 0.577348 5_3:+38661530 None:intergenic
GTTGGCATTGAAGGCAAAGG+TGG 0.579920 5_3:+38661504 None:intergenic
GTTGGCATTGAAGGCAAAGG+TGG 0.579920 5_3:+38670696 None:intergenic
TTAGGCACTGAAGGGATGGT+AGG 0.587385 5_3:+38661447 None:intergenic
TTCTATGCTCATGTTTGACA+AGG 0.589337 5_3:+38661650 None:intergenic
AATGGTGGAAAGTTGAGAGA+TGG 0.590990 5_3:+38661378 None:intergenic
GAAGGGATGGTAGGCAATGG+AGG 0.598281 5_3:+38661456 None:intergenic
CCAACATTGCCTCAACCTCA+AGG 0.612595 5_3:-38661486 Msa0810330:CDS
GTTGGAATAGAAGGCAAAGG+TGG 0.615727 5_3:+38670744 None:intergenic
TTCTAGGCTCATGTTTGACA+AGG 0.618361 5_3:+38670860 None:intergenic
AATGTTGGCATTGAAGGCAA+AGG 0.619480 5_3:+38661501 None:intergenic
AATGTTGGCATTGAAGGCAA+AGG 0.619480 5_3:+38670693 None:intergenic
TAGTGAGCTTAGGCACTGAA+GGG 0.628071 5_3:+38661439 None:intergenic
GTTGGAATAGAAGGCAAAGG+TGG 0.637502 5_3:+38661552 None:intergenic
GTAGGAATGCTAGGAAGTGG+TGG 0.647666 5_3:+38661414 None:intergenic
ACTGAAGGGATGGTAGGCAA+TGG 0.655830 5_3:+38661453 None:intergenic
CAAGGGGTAGAGGTTGAAGG+TGG 0.657058 5_3:+38661285 None:intergenic
TCAATGCCAACATTGCCTCA+AGG 0.659742 5_3:-38670684 Msa0810330:intron
AAGGTTGGAATAGAAGGCAA+AGG 0.659905 5_3:+38661549 None:intergenic
AATGTTGGAATAGAAGGCAA+AGG 0.665937 5_3:+38670741 None:intergenic
AATGGAGGAACATTGCCTTG+AGG 0.697803 5_3:+38661471 None:intergenic
ATGTTGGGAAGTGAATTGGT+TGG 0.737713 5_3:+38661354 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATTTTATTTTTTA+AGG - chr5_3:38669198-38669217 Msa0810330:intron 0.0%
!!! TTCTTTTTTATTTATGAATT+TGG - chr5_3:38661852-38661871 Msa0810330:intron 10.0%
!!! ATATATTAGGTTTTAATATT+GGG + chr5_3:38663005-38663024 None:intergenic 10.0%
!!! TCTAATTTTTTTTTTTTTGA+AGG - chr5_3:38663064-38663083 Msa0810330:intron 10.0%
!! AAAAATGCAAATAAATTAAA+TGG - chr5_3:38663912-38663931 Msa0810330:intron 10.0%
!! AAAATGCAAATAAATTAAAT+GGG - chr5_3:38663913-38663932 Msa0810330:intron 10.0%
!!! TTTTATTTTATTTGAATTGA+AGG - chr5_3:38664657-38664676 Msa0810330:intron 10.0%
!!! ATTTTATTTAAGAAAAGAAA+GGG - chr5_3:38664895-38664914 Msa0810330:intron 10.0%
!!! ATAATTTCCTAATAAATTTT+GGG + chr5_3:38664942-38664961 None:intergenic 10.0%
!!! AATAATTTCCTAATAAATTT+TGG + chr5_3:38664943-38664962 None:intergenic 10.0%
!!! TACTTTTTGTTAAATTTTTA+TGG + chr5_3:38665768-38665787 None:intergenic 10.0%
!!! AATATTGAACAAATTTTTTT+AGG - chr5_3:38666035-38666054 Msa0810330:intron 10.0%
!!! TTTTTTGTTATTTATTATAG+TGG + chr5_3:38669028-38669047 None:intergenic 10.0%
!!! AACATTTCAATATTTTTTTT+TGG + chr5_3:38669560-38669579 None:intergenic 10.0%
!!! AAAATATTGAAATGTTTTAA+AGG - chr5_3:38669564-38669583 Msa0810330:intron 10.0%
!!! TAACTTTTTTTTTTTTTTGA+AGG + chr5_3:38669838-38669857 None:intergenic 10.0%
!! CTTTGCATATATATATATAA+TGG - chr5_3:38661998-38662017 Msa0810330:intron 15.0%
!!! AACGAAAAATTGTTTTATTT+AGG + chr5_3:38662300-38662319 None:intergenic 15.0%
!!! ACTATATTATGTTTTGTATT+GGG + chr5_3:38662892-38662911 None:intergenic 15.0%
!!! TACTATATTATGTTTTGTAT+TGG + chr5_3:38662893-38662912 None:intergenic 15.0%
!!! GATATATTAGGTTTTAATAT+TGG + chr5_3:38663006-38663025 None:intergenic 15.0%
!! CAAGGATATTTAAAAATAAT+AGG + chr5_3:38663116-38663135 None:intergenic 15.0%
!! TTTGTATGCATATATATAAA+AGG - chr5_3:38663643-38663662 Msa0810330:intron 15.0%
!!! TATAAAAGGTATTATATAGA+AGG - chr5_3:38663657-38663676 Msa0810330:intron 15.0%
!!! AACTTAATTTTTTTTTCGTT+TGG - chr5_3:38664064-38664083 Msa0810330:intron 15.0%
!!! ACTTAATTTTTTTTTCGTTT+GGG - chr5_3:38664065-38664084 Msa0810330:intron 15.0%
!!! CTTTATTTTTAAATGCTATT+TGG - chr5_3:38664566-38664585 Msa0810330:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+GGG - chr5_3:38664763-38664782 Msa0810330:intron 15.0%
!!! GATTTTATTTAAGAAAAGAA+AGG - chr5_3:38664894-38664913 Msa0810330:intron 15.0%
!!! TGTAATTTTATTCAAAAGAT+AGG - chr5_3:38665837-38665856 Msa0810330:intron 15.0%
!! AACATTTATTGAAAATAACA+AGG - chr5_3:38666011-38666030 Msa0810330:intron 15.0%
!!! GAATTTTTATCAAAGTTTTT+AGG - chr5_3:38666057-38666076 Msa0810330:intron 15.0%
!!! TTTTTTACACTTTTTAAAAC+CGG - chr5_3:38666527-38666546 Msa0810330:intron 15.0%
!! TTTACAAAATTCATGAAAAA+GGG + chr5_3:38667869-38667888 None:intergenic 15.0%
!! AAAATATCTTATCTTCATAA+GGG + chr5_3:38668368-38668387 None:intergenic 15.0%
!! TAAAATATCTTATCTTCATA+AGG + chr5_3:38668369-38668388 None:intergenic 15.0%
!!! GACTTATAAGATATTTTATA+TGG + chr5_3:38668469-38668488 None:intergenic 15.0%
!!! GTTTATCTTAGTTTTATTTT+TGG + chr5_3:38669119-38669138 None:intergenic 15.0%
!!! ATAAAATTAAAATAGGTTGA+AGG - chr5_3:38669161-38669180 Msa0810330:intron 15.0%
!! TTAATAAAAAAAAACTGTTC+TGG + chr5_3:38669606-38669625 None:intergenic 15.0%
!! ATTAAATTAACGTGTTTAAA+AGG + chr5_3:38669644-38669663 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTGAAGGA+AGG + chr5_3:38669834-38669853 None:intergenic 15.0%
!!! CTTAATCAAAATATTTTTGT+GGG + chr5_3:38670259-38670278 None:intergenic 15.0%
!! ATGTTGAATTATTACACATT+TGG - chr5_3:38661905-38661924 Msa0810330:intron 20.0%
!!! TTTTACAAGTCGATTTTATA+AGG - chr5_3:38662856-38662875 Msa0810330:intron 20.0%
!!! TTTACAAGTCGATTTTATAA+GGG - chr5_3:38662857-38662876 Msa0810330:intron 20.0%
!! TAGTATCAGATCTATTAATT+CGG - chr5_3:38662908-38662927 Msa0810330:intron 20.0%
!!! TTTTGAGGAAATGATATATT+AGG + chr5_3:38663018-38663037 None:intergenic 20.0%
!! GGATATTTAAAAATAATAGG+TGG + chr5_3:38663113-38663132 None:intergenic 20.0%
!! TATATATGCATACAAATTTG+AGG + chr5_3:38663639-38663658 None:intergenic 20.0%
!!! ATTTTGAACAAACCATTATA+TGG + chr5_3:38663813-38663832 None:intergenic 20.0%
!!! TATAATGGTTTGTTCAAAAT+TGG - chr5_3:38663813-38663832 Msa0810330:intron 20.0%
!! AAACAAATTTCAAGAATTCA+AGG + chr5_3:38663960-38663979 None:intergenic 20.0%
!!! TTCTTGAAATTTGTTTGTTT+TGG - chr5_3:38663964-38663983 Msa0810330:intron 20.0%
!!! TCATTTTTTTACGATATTTC+CGG - chr5_3:38664014-38664033 Msa0810330:intron 20.0%
!!! TTGATGCATGTAATTTTTTT+GGG + chr5_3:38664110-38664129 None:intergenic 20.0%
!!! ATTGATGCATGTAATTTTTT+TGG + chr5_3:38664111-38664130 None:intergenic 20.0%
!! AAGTTAGAGAATGATAATTA+AGG - chr5_3:38664155-38664174 Msa0810330:intron 20.0%
!!! ATTTGTTTTATCTTGGTTTT+CGG - chr5_3:38664355-38664374 Msa0810330:intron 20.0%
!!! AACGAAAACAAAAACATTTT+TGG + chr5_3:38664741-38664760 None:intergenic 20.0%
!!! AAAAATGTTTTTGTTTTCGT+TGG - chr5_3:38664740-38664759 Msa0810330:intron 20.0%
!!! GTTGATTTTAAGTTTGAAAA+TGG - chr5_3:38664762-38664781 Msa0810330:intron 20.0%
!! ATACTTTAGATGTATGTTTA+GGG + chr5_3:38665078-38665097 None:intergenic 20.0%
!!! GTTAAATTTTTATGGCATTT+TGG + chr5_3:38665760-38665779 None:intergenic 20.0%
!! AACTCATTTCAAAAATATGT+AGG + chr5_3:38665810-38665829 None:intergenic 20.0%
!!! TAAAAATAATTTGTTCCTTG+TGG + chr5_3:38665955-38665974 None:intergenic 20.0%
!! AGTGTAAAAAAAATTCGAAT+CGG + chr5_3:38666518-38666537 None:intergenic 20.0%
!!! CTCAAATGCAATTTTTAAAA+CGG - chr5_3:38667579-38667598 Msa0810330:intron 20.0%
!!! TTTTGAAATGGATTTTAACA+TGG - chr5_3:38667750-38667769 Msa0810330:intron 20.0%
!! TTACAAAATTCATGAAAAAG+GGG + chr5_3:38667868-38667887 None:intergenic 20.0%
!! GTTTACAAAATTCATGAAAA+AGG + chr5_3:38667870-38667889 None:intergenic 20.0%
!!! CATCTTGAGAAAATATTTTT+AGG - chr5_3:38668133-38668152 Msa0810330:intron 20.0%
!!! ATATTTTTAGGTCCAAAATT+AGG - chr5_3:38668145-38668164 Msa0810330:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG - chr5_3:38668146-38668165 Msa0810330:intron 20.0%
!!! ATTTTATATGCCATATATAG+TGG - chr5_3:38668383-38668402 Msa0810330:intron 20.0%
!! AATCTAAAAAGAAGTAACAT+AGG + chr5_3:38668422-38668441 None:intergenic 20.0%
!! GGGAAATAAAAAATCAAATT+GGG + chr5_3:38668737-38668756 None:intergenic 20.0%
!!! AGGTTGAAATTTTAAATTTG+CGG + chr5_3:38668759-38668778 None:intergenic 20.0%
!! AAATAAAGAGAGAAAAACTA+AGG + chr5_3:38668782-38668801 None:intergenic 20.0%
!!! TTCTCTTTGCAATATTTTTT+TGG - chr5_3:38668949-38668968 Msa0810330:intron 20.0%
!!! TATCTTAGTTTTATTTTTGG+TGG + chr5_3:38669116-38669135 None:intergenic 20.0%
!!! CCTATTTTAATTTTATCAGT+AGG + chr5_3:38669157-38669176 None:intergenic 20.0%
!! CCTACTGATAAAATTAAAAT+AGG - chr5_3:38669154-38669173 Msa0810330:intron 20.0%
!! TGAATTGAATTCTTATCAAT+TGG + chr5_3:38669945-38669964 None:intergenic 20.0%
!! ACGATTTCTTTGTATTATAA+AGG + chr5_3:38669996-38670015 None:intergenic 20.0%
!! AAACCATAATATTCAAATGT+TGG + chr5_3:38670199-38670218 None:intergenic 20.0%
!!! CCTTAATCAAAATATTTTTG+TGG + chr5_3:38670260-38670279 None:intergenic 20.0%
!!! CCACAAAAATATTTTGATTA+AGG - chr5_3:38670257-38670276 Msa0810330:intron 20.0%
!!! CAAAAATATTTTGATTAAGG+AGG - chr5_3:38670260-38670279 Msa0810330:intron 20.0%
!!! TGGTTTTTCTTTTTCTTTTT+TGG + chr5_3:38670310-38670329 None:intergenic 20.0%
! AAGAAGTAAAGATATGATGA+AGG + chr5_3:38661303-38661322 None:intergenic 25.0%
! ATATATATGCAAAGATGAGA+GGG + chr5_3:38661992-38662011 None:intergenic 25.0%
! TATATATATGCAAAGATGAG+AGG + chr5_3:38661993-38662012 None:intergenic 25.0%
! AGAGTGAATTAAACTCTAAA+AGG - chr5_3:38662034-38662053 Msa0810330:intron 25.0%
! AGAATGAATAACAATCATGT+AGG - chr5_3:38662129-38662148 Msa0810330:intron 25.0%
!!! AGGAAAATAAGCTTTTGTTT+AGG + chr5_3:38662188-38662207 None:intergenic 25.0%
! TGATCTTGAGAAGAAAAAAA+AGG + chr5_3:38662325-38662344 None:intergenic 25.0%
! AGACTTAATTATTATTGCGT+TGG - chr5_3:38662448-38662467 Msa0810330:intron 25.0%
! AAATAGAAGTAGTATCATGT+CGG + chr5_3:38662551-38662570 None:intergenic 25.0%
!!! CTATTTTGGTTTAAAGATTG+TGG - chr5_3:38662725-38662744 Msa0810330:intron 25.0%
! TCTTTAATCTATATGGAACT+TGG + chr5_3:38662797-38662816 None:intergenic 25.0%
!! CGTCTTTTCTTTAATCTATA+TGG + chr5_3:38662804-38662823 None:intergenic 25.0%
! TATAGATTAAAGAAAAGACG+CGG - chr5_3:38662804-38662823 Msa0810330:intron 25.0%
!!! AAAATCGACTTGTAAAATGT+AGG + chr5_3:38662853-38662872 None:intergenic 25.0%
! TAGATTTAACAGTTGCTTAA+GGG + chr5_3:38663048-38663067 None:intergenic 25.0%
! TTAGATTTAACAGTTGCTTA+AGG + chr5_3:38663049-38663068 None:intergenic 25.0%
!!! TTTTTTAATGAGTGACGTAT+CGG + chr5_3:38663332-38663351 None:intergenic 25.0%
! AAGAGAATACTATAAGATGT+GGG + chr5_3:38663585-38663604 None:intergenic 25.0%
!! TTGTTCAAAATTGGTAATTG+TGG - chr5_3:38663822-38663841 Msa0810330:intron 25.0%
! AATTCTTTCATTGTGCAAAT+TGG + chr5_3:38663870-38663889 None:intergenic 25.0%
! TTTGCACAATGAAAGAATTA+TGG - chr5_3:38663871-38663890 Msa0810330:intron 25.0%
! AATTTCAAGAATTCAAGGAT+AGG + chr5_3:38663955-38663974 None:intergenic 25.0%
!!! ATTTTTTTGGGTACAAAAGA+GGG + chr5_3:38664098-38664117 None:intergenic 25.0%
!!! AATTTTTTTGGGTACAAAAG+AGG + chr5_3:38664099-38664118 None:intergenic 25.0%
! TTACATGCATCAATTAAAGT+AGG - chr5_3:38664117-38664136 Msa0810330:intron 25.0%
! TACATGCATCAATTAAAGTA+GGG - chr5_3:38664118-38664137 Msa0810330:intron 25.0%
! TAGAGAATGATAATTAAGGA+AGG - chr5_3:38664159-38664178 Msa0810330:intron 25.0%
! AGAGAATGATAATTAAGGAA+GGG - chr5_3:38664160-38664179 Msa0810330:intron 25.0%
!!! GACTATGATTTGTTTTATCT+TGG - chr5_3:38664348-38664367 Msa0810330:intron 25.0%
!!! TTTGTTTTATCTTGGTTTTC+GGG - chr5_3:38664356-38664375 Msa0810330:intron 25.0%
!! GAAAAAAATGAGGTATCAAA+AGG + chr5_3:38664415-38664434 None:intergenic 25.0%
!!! TTGATACCTCATTTTTTTCT+TGG - chr5_3:38664416-38664435 Msa0810330:intron 25.0%
!!! TGATACCTCATTTTTTTCTT+GGG - chr5_3:38664417-38664436 Msa0810330:intron 25.0%
! AAAAGAAAGGGAAAATCAAT+GGG - chr5_3:38664907-38664926 Msa0810330:intron 25.0%
! TTTGGATCCCAAAATTTATT+AGG - chr5_3:38664932-38664951 Msa0810330:intron 25.0%
!!! GTTCATGTTTTTTGGAAAAA+AGG - chr5_3:38664974-38664993 Msa0810330:intron 25.0%
! GTATGTTTAGATGTATGATT+AGG + chr5_3:38665024-38665043 None:intergenic 25.0%
! GATACTTTAGATGTATGTTT+AGG + chr5_3:38665079-38665098 None:intergenic 25.0%
!!! TTGCACTTTAATTTTTACCA+AGG + chr5_3:38665256-38665275 None:intergenic 25.0%
!! TCATAATGTTGGAGAAATTT+TGG - chr5_3:38665503-38665522 Msa0810330:intron 25.0%
! AAAATCAACATGAGAATCTA+AGG - chr5_3:38665541-38665560 Msa0810330:intron 25.0%
!!! TGTTTTGATTTAGTTTCTTG+TGG + chr5_3:38665645-38665664 None:intergenic 25.0%
! AAAGGATGGAATAAAAAGTT+TGG - chr5_3:38666644-38666663 Msa0810330:intron 25.0%
!!! TTTGTGTTGATGAATGTTTT+TGG - chr5_3:38666875-38666894 Msa0810330:intron 25.0%
! CAAATTCATTACCAAATTCA+AGG + chr5_3:38666907-38666926 None:intergenic 25.0%
!!! TGAATTTGGTAATGAATTTG+TGG - chr5_3:38666907-38666926 Msa0810330:intron 25.0%
! GTGTATTTGTGAAAAATGAT+TGG - chr5_3:38667225-38667244 Msa0810330:intron 25.0%
! AAGTACTTCATTTCAGTAAT+TGG + chr5_3:38667483-38667502 None:intergenic 25.0%
!!! GTCTCTAAGTCTTTTTAATT+GGG + chr5_3:38667641-38667660 None:intergenic 25.0%
!! TGTCTCTAAGTCTTTTTAAT+TGG + chr5_3:38667642-38667661 None:intergenic 25.0%
!!! ATTAAACAGAGTTTTAACAC+TGG - chr5_3:38667672-38667691 Msa0810330:intron 25.0%
!!! CTCAAATGCAATTTTTGAAA+TGG - chr5_3:38667738-38667757 Msa0810330:intron 25.0%
! ACAAATAGACAATCTTTCAA+AGG - chr5_3:38668082-38668101 Msa0810330:intron 25.0%
!!! AGTTTTATATCTTTTGCCAA+AGG - chr5_3:38668318-38668337 Msa0810330:intron 25.0%
! CATTGAGAAAAACAAACTAA+AGG - chr5_3:38668542-38668561 Msa0810330:intron 25.0%
! GGGGAAATAAAAAATCAAAT+TGG + chr5_3:38668738-38668757 None:intergenic 25.0%
!! GTTGAAATTTTAAATTTGCG+GGG + chr5_3:38668757-38668776 None:intergenic 25.0%
!! GGTTGAAATTTTAAATTTGC+GGG + chr5_3:38668758-38668777 None:intergenic 25.0%
! AATAAAAGAAGCAGAAGATA+TGG + chr5_3:38668896-38668915 None:intergenic 25.0%
! AACAACATACTAATTTGAAC+AGG + chr5_3:38669457-38669476 None:intergenic 25.0%
!!! TTGTTTTTAGCTGATTTAAC+TGG - chr5_3:38669472-38669491 Msa0810330:intron 25.0%
!!! TTTTTTTTTGGATGACAAGA+GGG + chr5_3:38669548-38669567 None:intergenic 25.0%
!!! ATTTTTTTTTGGATGACAAG+AGG + chr5_3:38669549-38669568 None:intergenic 25.0%
!!! GTGTTTAAAAGGCATTAATT+TGG + chr5_3:38669633-38669652 None:intergenic 25.0%
!!! TTTTTTTTTTGAAGGAAGGT+TGG + chr5_3:38669830-38669849 None:intergenic 25.0%
!! TGAGTTGAATCTTTACTAAT+TGG + chr5_3:38669894-38669913 None:intergenic 25.0%
! ACAAATTGTTAAAGAGGAAT+TGG + chr5_3:38670142-38670161 None:intergenic 25.0%
! CATCCAACATTTGAATATTA+TGG - chr5_3:38670193-38670212 Msa0810330:intron 25.0%
! AGATATTTGAAGGATGATAT+TGG + chr5_3:38670385-38670404 None:intergenic 25.0%
! ATAGAGTAAGAGATATTTGA+AGG + chr5_3:38670395-38670414 None:intergenic 25.0%
!! TGAGATTTTATGAGAAGTAA+GGG + chr5_3:38670436-38670455 None:intergenic 25.0%
!! TTGAGATTTTATGAGAAGTA+AGG + chr5_3:38670437-38670456 None:intergenic 25.0%
TCATTTCGTTATTGTGTTGT+TGG - chr5_3:38661778-38661797 Msa0810330:intron 30.0%
! AACTCTAAAAGGCAACATAA+TGG - chr5_3:38662045-38662064 Msa0810330:intron 30.0%
! ACATAATGGAACAATGTGTA+TGG - chr5_3:38662059-38662078 Msa0810330:intron 30.0%
! GTTGACAATTGACTCAATAT+AGG + chr5_3:38662208-38662227 None:intergenic 30.0%
TCAATTGTCAACCATGTAAT+TGG - chr5_3:38662216-38662235 Msa0810330:intron 30.0%
CAATTGTCAACCATGTAATT+GGG - chr5_3:38662217-38662236 Msa0810330:intron 30.0%
!! ATAATGGATTTCAACCTTGT+GGG + chr5_3:38662354-38662373 None:intergenic 30.0%
!! TATAATGGATTTCAACCTTG+TGG + chr5_3:38662355-38662374 None:intergenic 30.0%
CAAGTGAATGCAAACTATAA+TGG + chr5_3:38662370-38662389 None:intergenic 30.0%
TCTTTCTCTAGTTAGTCAAT+GGG - chr5_3:38662410-38662429 Msa0810330:intron 30.0%
ACTGAAACATGTACATTGAT+AGG + chr5_3:38662694-38662713 None:intergenic 30.0%
! AGTGATGGTTTCTACTATTT+TGG - chr5_3:38662711-38662730 Msa0810330:intron 30.0%
! AAAGATTGTGGTTTGTGTTA+AGG - chr5_3:38662737-38662756 Msa0810330:intron 30.0%
GGTGCATGAATATAAATGAT+TGG + chr5_3:38662938-38662957 None:intergenic 30.0%
AAGTCCAATACTACTTTACT+TGG + chr5_3:38662959-38662978 None:intergenic 30.0%
! AGTAAAGTAGTATTGGACTT+AGG - chr5_3:38662959-38662978 Msa0810330:intron 30.0%
! GTAAAGTAGTATTGGACTTA+GGG - chr5_3:38662960-38662979 Msa0810330:intron 30.0%
!! TAGGTTTTAATATTGGGACT+TGG + chr5_3:38662999-38663018 None:intergenic 30.0%
GAAGGACTGTTAAATCTAAA+TGG - chr5_3:38663082-38663101 Msa0810330:intron 30.0%
ACTGTTAAATCTAAATGGCT+TGG - chr5_3:38663087-38663106 Msa0810330:intron 30.0%
!! TTTAGGAGGAGATTTTAATG+TGG + chr5_3:38663223-38663242 None:intergenic 30.0%
!! ACATTGATTTGGTACTTCAT+AGG + chr5_3:38663255-38663274 None:intergenic 30.0%
! AGTGATAACTCACATTGATT+TGG + chr5_3:38663266-38663285 None:intergenic 30.0%
! TCTGATAACTCACATTGATT+TGG + chr5_3:38663297-38663316 None:intergenic 30.0%
AGTGTTCTATTTAGTGATGA+TGG + chr5_3:38663477-38663496 None:intergenic 30.0%
GAAGAGAATACTATAAGATG+TGG + chr5_3:38663586-38663605 None:intergenic 30.0%
!! CATACAAATTTGAGGCTTTT+GGG + chr5_3:38663631-38663650 None:intergenic 30.0%
AGTTTGTATCCTCCATATAA+TGG - chr5_3:38663798-38663817 Msa0810330:intron 30.0%
TTGAACAAACCATTATATGG+AGG + chr5_3:38663810-38663829 None:intergenic 30.0%
TCATTGTGCAAATTGGATTT+AGG + chr5_3:38663863-38663882 None:intergenic 30.0%
ATTCCTTCGATACATATCAA+CGG - chr5_3:38664298-38664317 Msa0810330:intron 30.0%
TAGGATACTATAGTCGTTAT+GGG + chr5_3:38664516-38664535 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG + chr5_3:38664517-38664536 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG - chr5_3:38664517-38664536 Msa0810330:intron 30.0%
TCTTGACTTAGTAAACTCTT+AGG + chr5_3:38664610-38664629 None:intergenic 30.0%
GAGTTTACTAAGTCAAGAAT+TGG - chr5_3:38664612-38664631 Msa0810330:intron 30.0%
TTTACTAAGTCAAGAATTGG+AGG - chr5_3:38664615-38664634 Msa0810330:intron 30.0%
TTACTAAGTCAAGAATTGGA+GGG - chr5_3:38664616-38664635 Msa0810330:intron 30.0%
!! ACATTTTTGGAAGAGAACTA+CGG + chr5_3:38664728-38664747 None:intergenic 30.0%
!! TTTTGAAGAATAAGAGAGAG+AGG - chr5_3:38664787-38664806 Msa0810330:intron 30.0%
CATAAGATTGTGAAATTGTG+AGG - chr5_3:38664819-38664838 Msa0810330:intron 30.0%
GAAAAGAAAGGGAAAATCAA+TGG - chr5_3:38664906-38664925 Msa0810330:intron 30.0%
!!! GTGATGTTGTTCATGTTTTT+TGG - chr5_3:38664966-38664985 Msa0810330:intron 30.0%
ATTCCCTAAACATACATCTA+AGG - chr5_3:38665044-38665063 Msa0810330:intron 30.0%
ATGCCTTAGATGTATGTTTA+GGG + chr5_3:38665050-38665069 None:intergenic 30.0%
AAGACCATAGCATGTAAATA+GGG + chr5_3:38665175-38665194 None:intergenic 30.0%
GGCTTAGAATGTAAAACTTA+GGG + chr5_3:38665235-38665254 None:intergenic 30.0%
AGGCTTAGAATGTAAAACTT+AGG + chr5_3:38665236-38665255 None:intergenic 30.0%
! AAGTTTTACATTCTAAGCCT+TGG - chr5_3:38665236-38665255 Msa0810330:intron 30.0%
AAATATGATGTGAGATGCTA+TGG - chr5_3:38665305-38665324 Msa0810330:intron 30.0%
! CTTGAAAGTCTTGTAAACTT+TGG + chr5_3:38665578-38665597 None:intergenic 30.0%
! TTTCTTGTGGATTTTGTGTT+TGG + chr5_3:38665632-38665651 None:intergenic 30.0%
CTTCAAAAGTTACATGTTCA+AGG - chr5_3:38665697-38665716 Msa0810330:intron 30.0%
CACAATTATATGCCAAAATC+CGG - chr5_3:38665721-38665740 Msa0810330:intron 30.0%
ACAATTATATGCCAAAATCC+GGG - chr5_3:38665722-38665741 Msa0810330:intron 30.0%
! TTTTGGTATGATCTTAAACC+CGG + chr5_3:38665743-38665762 None:intergenic 30.0%
GAAAAAGAATTGAATCCACA+AGG - chr5_3:38665937-38665956 Msa0810330:intron 30.0%
CAAATTGGAAGAAAAAAGGA+TGG - chr5_3:38666630-38666649 Msa0810330:intron 30.0%
TCTTCTTATGTATTCGGATT+AGG - chr5_3:38666716-38666735 Msa0810330:intron 30.0%
! TGATTGAAGATTGTTGTTCA+TGG - chr5_3:38666828-38666847 Msa0810330:intron 30.0%
! TGTGATTTTTGTGGAATTGA+AGG - chr5_3:38666852-38666871 Msa0810330:intron 30.0%
TTTGGATGAATCCTTGAATT+TGG - chr5_3:38666893-38666912 Msa0810330:intron 30.0%
!! ATTTGGTAATGAATTTGTGG+AGG - chr5_3:38666910-38666929 Msa0810330:intron 30.0%
!! TTGTAGTTTGTTAGAGATGA+AGG - chr5_3:38666953-38666972 Msa0810330:intron 30.0%
!! GGTTTTGTGGTGAATTTTAA+TGG - chr5_3:38666992-38667011 Msa0810330:intron 30.0%
!! TTTGTGGTGAATTTTAATGG+TGG - chr5_3:38666995-38667014 Msa0810330:intron 30.0%
!! TTGTGGTGAATTTTAATGGT+GGG - chr5_3:38666996-38667015 Msa0810330:intron 30.0%
TCACACATCACCTATATAAT+GGG + chr5_3:38667275-38667294 None:intergenic 30.0%
TTCACACATCACCTATATAA+TGG + chr5_3:38667276-38667295 None:intergenic 30.0%
! ATAGGTGATGTGTGAATTTT+TGG - chr5_3:38667280-38667299 Msa0810330:intron 30.0%
!! GTGTGAATTTTTGGACTAAT+AGG - chr5_3:38667289-38667308 Msa0810330:intron 30.0%
!! ATTTTTGGACTAATAGGAGT+AGG - chr5_3:38667295-38667314 Msa0810330:intron 30.0%
!! AATGCAATTTTGACAACTTG+AGG - chr5_3:38667360-38667379 Msa0810330:intron 30.0%
! CATTTCACACGAAATTTTGA+CGG + chr5_3:38667521-38667540 None:intergenic 30.0%
AAATGACTAAAATGCCCTTA+GGG - chr5_3:38667695-38667714 Msa0810330:intron 30.0%
! ATTGTGTGAGTCTTTTCAAT+TGG + chr5_3:38667800-38667819 None:intergenic 30.0%
! AAAGACTCACACAATTTTCA+AGG - chr5_3:38667805-38667824 Msa0810330:intron 30.0%
! GCATTTCAAGTCATTTGAAT+TGG + chr5_3:38667936-38667955 None:intergenic 30.0%
! GAAATGCAAGAAAGATGTTT+TGG - chr5_3:38667949-38667968 Msa0810330:intron 30.0%
ACTTGAAATGCAAGAAAACA+TGG - chr5_3:38667975-38667994 Msa0810330:intron 30.0%
! GCTGTATTTGCATATTTCTA+CGG + chr5_3:38668036-38668055 None:intergenic 30.0%
! ATCGTGTTATACCCTAATTT+TGG + chr5_3:38668160-38668179 None:intergenic 30.0%
AATTAGGGTATAACACGATT+CGG - chr5_3:38668161-38668180 Msa0810330:intron 30.0%
TTGAGATTACTTAAGGTCTT+TGG + chr5_3:38668268-38668287 None:intergenic 30.0%
TATGGAGTTGAGATTACTTA+AGG + chr5_3:38668275-38668294 None:intergenic 30.0%
TTAAGTAATCTCAACTCCAT+AGG - chr5_3:38668274-38668293 Msa0810330:intron 30.0%
TATAATGAGTGAGATTCCTT+TGG + chr5_3:38668337-38668356 None:intergenic 30.0%
TACTAAATGGCCACTATATA+TGG + chr5_3:38668396-38668415 None:intergenic 30.0%
CTAAAAAGAAGTAACATAGG+AGG + chr5_3:38668419-38668438 None:intergenic 30.0%
! CATCTATCTTGGTGATTTAA+TGG + chr5_3:38668621-38668640 None:intergenic 30.0%
TAAAGAGAGAAAAACTAAGG+AGG + chr5_3:38668779-38668798 None:intergenic 30.0%
ATGAAGAATTAGCAAAGAGA+AGG + chr5_3:38668839-38668858 None:intergenic 30.0%
GAAGAAAAGAACTGAAAGAA+TGG + chr5_3:38668868-38668887 None:intergenic 30.0%
TTTGCCTAGATTTGAACTTA+TGG - chr5_3:38668914-38668933 Msa0810330:intron 30.0%
! TATTGCAAAGAGAAAAGTGT+TGG + chr5_3:38668943-38668962 None:intergenic 30.0%
! TGTTTTACTGCAACAAAGAA+CGG - chr5_3:38669273-38669292 Msa0810330:intron 30.0%
!!! TTAAGCGGTAGTTTTTTTGT+TGG - chr5_3:38669515-38669534 Msa0810330:intron 30.0%
!!! TAAGCGGTAGTTTTTTTGTT+GGG - chr5_3:38669516-38669535 Msa0810330:intron 30.0%
TATTCGGATTATTGTAAGGT+CGG + chr5_3:38669864-38669883 None:intergenic 30.0%
AACCTATTCGGATTATTGTA+AGG + chr5_3:38669868-38669887 None:intergenic 30.0%
ACTAATTGGACTAACCTATT+CGG + chr5_3:38669880-38669899 None:intergenic 30.0%
! TTAGGATTTTTGCTTCACTT+AGG + chr5_3:38670062-38670081 None:intergenic 30.0%
AAGTGAAGCAAAAATCCTAA+AGG - chr5_3:38670062-38670081 Msa0810330:intron 30.0%
AATGCGACAAATTGTTAAAG+AGG + chr5_3:38670148-38670167 None:intergenic 30.0%
ACATACAAAACAGTAAGAGT+TGG - chr5_3:38670170-38670189 Msa0810330:intron 30.0%
TATTGGTCCAACAAATATCA+TGG + chr5_3:38670368-38670387 None:intergenic 30.0%
! GAGATTTTATGAGAAGTAAG+GGG + chr5_3:38670435-38670454 None:intergenic 30.0%
AAGAAGTAAAGATGTGATGA+TGG + chr5_3:38670513-38670532 None:intergenic 30.0%
!!! AATGTTGGTTTTGGCAAATT+GGG + chr5_3:38670596-38670615 None:intergenic 30.0%
! TATGATGAAGGTTTTCACTG+AGG + chr5_3:38661291-38661310 None:intergenic 35.0%
GTTGTGTAGTTGTTTGCAAA+AGG + chr5_3:38661364-38661383 None:intergenic 35.0%
AATGTTGGAATAGAAGGCAA+AGG + chr5_3:38661452-38661471 None:intergenic 35.0%
AACGAGCGAAAAATCTTCAA+GGG + chr5_3:38661727-38661746 None:intergenic 35.0%
! TTTCGTTATTGTGTTGTTGG+AGG - chr5_3:38661781-38661800 Msa0810330:intron 35.0%
TCACTTGTCTGCTATGATTA+CGG - chr5_3:38662383-38662402 Msa0810330:intron 35.0%
CTCTTTCTCTAGTTAGTCAA+TGG - chr5_3:38662409-38662428 Msa0810330:intron 35.0%
! TTCAAATTGAAAGTGTGCCT+GGG - chr5_3:38662501-38662520 Msa0810330:intron 35.0%
TCAACTCGCTCTTAAAAGTT+TGG - chr5_3:38662659-38662678 Msa0810330:intron 35.0%
CAATGTACATGTTTCAGTGA+TGG - chr5_3:38662696-38662715 Msa0810330:intron 35.0%
!! ACAAGTCGATTTTATAAGGG+TGG - chr5_3:38662860-38662879 Msa0810330:intron 35.0%
!! CAAGTCGATTTTATAAGGGT+GGG - chr5_3:38662861-38662880 Msa0810330:intron 35.0%
TGCACCAAGTAAAGTAGTAT+TGG - chr5_3:38662952-38662971 Msa0810330:intron 35.0%
! CTTAAGGGAACACAATTTTG+AGG + chr5_3:38663033-38663052 None:intergenic 35.0%
!! TTTAGTGATGATGGTGAAAG+AGG + chr5_3:38663468-38663487 None:intergenic 35.0%
TACTATAAGATGTGGGACAT+TGG + chr5_3:38663578-38663597 None:intergenic 35.0%
!! GCATACAAATTTGAGGCTTT+TGG + chr5_3:38663632-38663651 None:intergenic 35.0%
!! AGACTTTGAAGTTCACTAGA+TGG + chr5_3:38663995-38664014 None:intergenic 35.0%
ATTCTTAGACATGCAAACTC+CGG + chr5_3:38664036-38664055 None:intergenic 35.0%
! GAGGTATCAAAAGGTTCAAA+AGG + chr5_3:38664406-38664425 None:intergenic 35.0%
!!! ACCTCATTTTTTTCTTGGGA+AGG - chr5_3:38664421-38664440 Msa0810330:intron 35.0%
!!! CCTCATTTTTTTCTTGGGAA+GGG - chr5_3:38664422-38664441 Msa0810330:intron 35.0%
AAAGTAAAGACGGTTCCTAT+AGG + chr5_3:38664535-38664554 None:intergenic 35.0%
GTGGATTTGATCCCTTAAAA+GGG + chr5_3:38664706-38664725 None:intergenic 35.0%
AGGGAAAATCAATGGGAATT+TGG - chr5_3:38664914-38664933 Msa0810330:intron 35.0%
CATGCCTTAGATGTATGTTT+AGG + chr5_3:38665051-38665070 None:intergenic 35.0%
CAAGACCATAGCATGTAAAT+AGG + chr5_3:38665176-38665195 None:intergenic 35.0%
TAACGAGACATGAAACAGAA+GGG - chr5_3:38665328-38665347 Msa0810330:intron 35.0%
!! CACTTTTTGTCAAGCTTGAT+TGG + chr5_3:38665429-38665448 None:intergenic 35.0%
AGCCTAGATTCTCATAATGT+TGG - chr5_3:38665492-38665511 Msa0810330:intron 35.0%
CTCCAACATTATGAGAATCT+AGG + chr5_3:38665497-38665516 None:intergenic 35.0%
!! CGGATTTTGGCATATAATTG+TGG + chr5_3:38665723-38665742 None:intergenic 35.0%
! ATGATCTTAAACCCGGATTT+TGG + chr5_3:38665736-38665755 None:intergenic 35.0%
!! CAAAGTTTTTAGGCAAACAG+TGG - chr5_3:38666067-38666086 Msa0810330:intron 35.0%
TGTGCATATAGCGAGAAAAT+AGG - chr5_3:38666109-38666128 Msa0810330:intron 35.0%
GATATGGATCTTGTGTGTTT+GGG + chr5_3:38666159-38666178 None:intergenic 35.0%
TATTGCTTTCTGTGTGGATA+TGG + chr5_3:38666175-38666194 None:intergenic 35.0%
ATATCCACACAGAAAGCAAT+AGG - chr5_3:38666174-38666193 Msa0810330:intron 35.0%
TATCCACACAGAAAGCAATA+GGG - chr5_3:38666175-38666194 Msa0810330:intron 35.0%
ATCCAATTGGATCAATCCTA+CGG + chr5_3:38666202-38666221 None:intergenic 35.0%
CATGCGCATAGGATAAAAAA+TGG - chr5_3:38666274-38666293 Msa0810330:intron 35.0%
GAGAGAATTTATGCATGCTT+TGG + chr5_3:38666367-38666386 None:intergenic 35.0%
!! ATTGTGTTTTGGATGTTTCC+GGG + chr5_3:38666579-38666598 None:intergenic 35.0%
!! GATTGTGTTTTGGATGTTTC+CGG + chr5_3:38666580-38666599 None:intergenic 35.0%
!!! TAGGTGGATTGATTGTGTTT+TGG + chr5_3:38666590-38666609 None:intergenic 35.0%
!!! CTTTTTTCTTCCAATTTGCG+CGG + chr5_3:38666628-38666647 None:intergenic 35.0%
CCGAATACATAAGAAGAATC+CGG + chr5_3:38666713-38666732 None:intergenic 35.0%
CCGGATTCTTCTTATGTATT+CGG - chr5_3:38666710-38666729 Msa0810330:intron 35.0%
! GTTCATGGATGTGATTTTTG+TGG - chr5_3:38666843-38666862 Msa0810330:intron 35.0%
AATGAATTTGTGGAGGTTTG+AGG - chr5_3:38666917-38666936 Msa0810330:intron 35.0%
TTTGTTAGAGATGAAGGTTG+TGG - chr5_3:38666959-38666978 Msa0810330:intron 35.0%
GTTAGAGATGAAGATTGTGA+TGG - chr5_3:38667047-38667066 Msa0810330:intron 35.0%
GTTAGAGATGAAGATTGTAG+TGG - chr5_3:38667079-38667098 Msa0810330:intron 35.0%
!! GTAGTGGAAAGAGTTTGTTA+TGG - chr5_3:38667095-38667114 Msa0810330:intron 35.0%
AAATGACCAAAATGCCCTTA+GGG - chr5_3:38667536-38667555 Msa0810330:intron 35.0%
!! TGAGTCATTTTAGTCCCTAA+GGG + chr5_3:38667553-38667572 None:intergenic 35.0%
!! TTGAGTCATTTTAGTCCCTA+AGG + chr5_3:38667554-38667573 None:intergenic 35.0%
GAAATGACTAAAATGCCCTT+AGG - chr5_3:38667694-38667713 Msa0810330:intron 35.0%
AATGACTAAAATGCCCTTAG+GGG - chr5_3:38667696-38667715 Msa0810330:intron 35.0%
CTATCTCTGATATGTGTCTT+TGG + chr5_3:38668109-38668128 None:intergenic 35.0%
TTAAAGAGTAGGAGTGAGAT+AGG + chr5_3:38668217-38668236 None:intergenic 35.0%
! TGAGTATTGTGAGGATGAAT+CGG + chr5_3:38668245-38668264 None:intergenic 35.0%
!! GTAACATAGGAGGTACTAAA+TGG + chr5_3:38668409-38668428 None:intergenic 35.0%
! ATCTTGGTGATTTAATGGCA+CGG + chr5_3:38668616-38668635 None:intergenic 35.0%
TTTGTGTGGCACAGATTTAA+TGG - chr5_3:38668672-38668691 Msa0810330:intron 35.0%
GCACAGATTTAATGGCATAA+TGG - chr5_3:38668680-38668699 Msa0810330:intron 35.0%
ATTGGGTGATCATAGAAGTT+GGG + chr5_3:38668720-38668739 None:intergenic 35.0%
AATTGGGTGATCATAGAAGT+TGG + chr5_3:38668721-38668740 None:intergenic 35.0%
AGAAGCAGAAGATATGGATT+AGG + chr5_3:38668890-38668909 None:intergenic 35.0%
GTTTACTGCAACATATTCGA+CGG - chr5_3:38669308-38669327 Msa0810330:intron 35.0%
GTTGTTGGATATGAATTGAG+AGG - chr5_3:38669330-38669349 Msa0810330:intron 35.0%
CTCTGTACGAATGACAAATT+CGG + chr5_3:38669357-38669376 None:intergenic 35.0%
ACAAGCTATATTTGCAAGTG+CGG + chr5_3:38669398-38669417 None:intergenic 35.0%
!!! GTAGTTTTTTTGTTGGGCTT+AGG - chr5_3:38669522-38669541 Msa0810330:intron 35.0%
GACCTTACAATAATCCGAAT+AGG - chr5_3:38669863-38669882 Msa0810330:intron 35.0%
TTGCTTCACTTAGGTTCAAA+AGG + chr5_3:38670053-38670072 None:intergenic 35.0%
GAATTGGACTATCTAAGAGT+AGG + chr5_3:38670126-38670145 None:intergenic 35.0%
AAGCGTTTGCAAGTTTAAGT+TGG + chr5_3:38670330-38670349 None:intergenic 35.0%
GTCCAAACCATGATATTTGT+TGG - chr5_3:38670358-38670377 Msa0810330:intron 35.0%
GTCCAACAAATATCATGGTT+TGG + chr5_3:38670363-38670382 None:intergenic 35.0%
!! CATGACTTGTTACTTGATGA+AGG + chr5_3:38670477-38670496 None:intergenic 35.0%
CTTCATCAAGTAACAAGTCA+TGG - chr5_3:38670475-38670494 Msa0810330:intron 35.0%
!!! TGTGATGATGGTTTTCATTG+AGG + chr5_3:38670501-38670520 None:intergenic 35.0%
TTCTATGCTCATGTTTGACA+AGG + chr5_3:38670543-38670562 None:intergenic 35.0%
!!! CAATGTTGGTTTTGGCAAAT+TGG + chr5_3:38670597-38670616 None:intergenic 35.0%
!!! ATTGAAGGCAATGTTGGTTT+TGG + chr5_3:38670605-38670624 None:intergenic 35.0%
GTTGAGATTGAAGGAATGTT+GGG + chr5_3:38670854-38670873 None:intergenic 35.0%
! GAGATAATGGTTGAGATTGA+AGG + chr5_3:38670863-38670882 None:intergenic 35.0%
TTCTAGGCTCATGTTTGACA+AGG + chr5_3:38661333-38661352 None:intergenic 40.0%
AATGTTGGGTTTGGCAAAGT+GGG + chr5_3:38661404-38661423 None:intergenic 40.0%
ATTGAAGGCAATGTTGGGTT+TGG + chr5_3:38661413-38661432 None:intergenic 40.0%
TTGGGATTGAAGGCAATGTT+GGG + chr5_3:38661418-38661437 None:intergenic 40.0%
GGTAATGTTGTTGGGATTGA+AGG + chr5_3:38661428-38661447 None:intergenic 40.0%
! GCAAAGGTGGTAATGTTGTT+GGG + chr5_3:38661436-38661455 None:intergenic 40.0%
GAAGGCAATGTTGGAATAGA+AGG + chr5_3:38661458-38661477 None:intergenic 40.0%
! AATGTTGGCATTGAAGGCAA+AGG + chr5_3:38661500-38661519 None:intergenic 40.0%
ACATTACCTTGAGGCAATGT+TGG + chr5_3:38661515-38661534 None:intergenic 40.0%
AATGGAGGAACATTACCTTG+AGG + chr5_3:38661524-38661543 None:intergenic 40.0%
ATAGAAGGGATAGTAGGCAA+TGG + chr5_3:38661542-38661561 None:intergenic 40.0%
TTAGGCATAGAAGGGATAGT+AGG + chr5_3:38661548-38661567 None:intergenic 40.0%
TAGTGAGCTTAGGCATAGAA+GGG + chr5_3:38661556-38661575 None:intergenic 40.0%
ATAGTGAGCTTAGGCATAGA+AGG + chr5_3:38661557-38661576 None:intergenic 40.0%
! AAGTTGAGAGATGGAAGTGT+TGG + chr5_3:38661608-38661627 None:intergenic 40.0%
GTTGAGATTGAAGGAAGGTT+GGG + chr5_3:38661656-38661675 None:intergenic 40.0%
TGATGGTTGAGATTGAAGGA+AGG + chr5_3:38661661-38661680 None:intergenic 40.0%
! GAGATGATGGTTGAGATTGA+AGG + chr5_3:38661665-38661684 None:intergenic 40.0%
GAAAAATCTTCAAGGGGAAG+AGG + chr5_3:38661720-38661739 None:intergenic 40.0%
ACGAGCGAAAAATCTTCAAG+GGG + chr5_3:38661726-38661745 None:intergenic 40.0%
GAACGAGCGAAAAATCTTCA+AGG + chr5_3:38661728-38661747 None:intergenic 40.0%
ACCATGTAATTGGGCACAAA+TGG - chr5_3:38662226-38662245 Msa0810330:intron 40.0%
ACCATTTGTGCCCAATTACA+TGG + chr5_3:38662230-38662249 None:intergenic 40.0%
! CTTCAAATTGAAAGTGTGCC+TGG - chr5_3:38662500-38662519 Msa0810330:intron 40.0%
GGTGTTCGCAATTAATGTGT+TGG - chr5_3:38662522-38662541 Msa0810330:intron 40.0%
! GTGTTTGTGTCACTACTTCA+TGG - chr5_3:38662604-38662623 Msa0810330:intron 40.0%
CTGAAATGTTGCATGCAAGT+GGG + chr5_3:38663146-38663165 None:intergenic 40.0%
ACTGAAATGTTGCATGCAAG+TGG + chr5_3:38663147-38663166 None:intergenic 40.0%
!!! ATACCCAAAGCATCGTTTTC+GGG + chr5_3:38663198-38663217 None:intergenic 40.0%
!!! CATACCCAAAGCATCGTTTT+CGG + chr5_3:38663199-38663218 None:intergenic 40.0%
TTCATAGGAGAGTGGTGTTT+AGG + chr5_3:38663240-38663259 None:intergenic 40.0%
TTTGGTACTTCATAGGAGAG+TGG + chr5_3:38663248-38663267 None:intergenic 40.0%
TATAAGATGTGGGACATTGG+TGG + chr5_3:38663575-38663594 None:intergenic 40.0%
!! CAAATTTGAGGCTTTTGGGT+AGG + chr5_3:38663627-38663646 None:intergenic 40.0%
! GTATCCACCTTTGAAGGAAA+GGG + chr5_3:38663754-38663773 None:intergenic 40.0%
! AGTATCCACCTTTGAAGGAA+AGG + chr5_3:38663755-38663774 None:intergenic 40.0%
GATGACGTATAGCAACATGT+TGG - chr5_3:38664227-38664246 Msa0810330:intron 40.0%
CCCTTCCCAAGAAAAAAATG+AGG + chr5_3:38664425-38664444 None:intergenic 40.0%
! TTGCCTACGTACCCTTTTAA+GGG - chr5_3:38664692-38664711 Msa0810330:intron 40.0%
! GGTGGATTTGATCCCTTAAA+AGG + chr5_3:38664707-38664726 None:intergenic 40.0%
!! TTTTTGGAAGAGAACTACGG+TGG + chr5_3:38664725-38664744 None:intergenic 40.0%
TTCACAATCTTATGCCCTTG+AGG + chr5_3:38664813-38664832 None:intergenic 40.0%
GGGCATGATGTAAAAGACAA+TGG + chr5_3:38665155-38665174 None:intergenic 40.0%
CATGCCCTATTTACATGCTA+TGG - chr5_3:38665168-38665187 Msa0810330:intron 40.0%
GTAACGAGACATGAAACAGA+AGG - chr5_3:38665327-38665346 Msa0810330:intron 40.0%
AACGAGACATGAAACAGAAG+GGG - chr5_3:38665329-38665348 Msa0810330:intron 40.0%
AGCAAGCATACACCAAAACA+AGG - chr5_3:38665664-38665683 Msa0810330:intron 40.0%
GCAAGCATACACCAAAACAA+GGG - chr5_3:38665665-38665684 Msa0810330:intron 40.0%
CAAGCATACACCAAAACAAG+GGG - chr5_3:38665666-38665685 Msa0810330:intron 40.0%
GGATATGGATCTTGTGTGTT+TGG + chr5_3:38666160-38666179 None:intergenic 40.0%
GGATCAAGGATTGATCCAAT+TGG + chr5_3:38666215-38666234 None:intergenic 40.0%
! TGTTGTGTTGTTCACGTGAA+AGG + chr5_3:38666319-38666338 None:intergenic 40.0%
!! CTTTGGCTTTAGAGAGAGAA+AGG + chr5_3:38666350-38666369 None:intergenic 40.0%
CTTCAACCTCATGAATGTCA+CGG - chr5_3:38666408-38666427 Msa0810330:intron 40.0%
TTCAACCTCATGAATGTCAC+GGG - chr5_3:38666409-38666428 Msa0810330:intron 40.0%
TCGAAAAGAGGATAACGATC+CGG + chr5_3:38666549-38666568 None:intergenic 40.0%
! CCTCTTTTCGAATATGAACC+CGG - chr5_3:38666558-38666577 Msa0810330:intron 40.0%
GCTATATGTGTAGATGTAGG+TGG + chr5_3:38666606-38666625 None:intergenic 40.0%
CGCGCAAATTGGAAGAAAAA+AGG - chr5_3:38666626-38666645 Msa0810330:intron 40.0%
!! ATGCTTGACGAAGCTTTGAA+TGG - chr5_3:38666685-38666704 Msa0810330:intron 40.0%
AGGAATGCAATCGAAGCAAA+GGG + chr5_3:38666757-38666776 None:intergenic 40.0%
AAGGAATGCAATCGAAGCAA+AGG + chr5_3:38666758-38666777 None:intergenic 40.0%
GTTGTTGAATTCGGTCACAA+TGG - chr5_3:38666802-38666821 Msa0810330:intron 40.0%
! TGGAGGTTTGAGGTTAATTG+TGG - chr5_3:38666927-38666946 Msa0810330:intron 40.0%
! AGGTTTGAGGTTAATTGTGG+TGG - chr5_3:38666930-38666949 Msa0810330:intron 40.0%
!! GTGGAAAGAGTTTGTTATGG+TGG - chr5_3:38667098-38667117 Msa0810330:intron 40.0%
!! GAGTTTGTTATGGTGGTTTG+AGG - chr5_3:38667105-38667124 Msa0810330:intron 40.0%
! TTTGTTATGGTGGTTTGAGG+TGG - chr5_3:38667108-38667127 Msa0810330:intron 40.0%
!! GTGGTGGAAAAAGTTTGTTG+TGG - chr5_3:38667127-38667146 Msa0810330:intron 40.0%
!! GTGGAAAAAGTTTGTTGTGG+TGG - chr5_3:38667130-38667149 Msa0810330:intron 40.0%
!! GAAAAAGTTTGTTGTGGTGG+TGG - chr5_3:38667133-38667152 Msa0810330:intron 40.0%
CTTTCCCTCTTTCTTCTCTT+AGG + chr5_3:38667180-38667199 None:intergenic 40.0%
!! TGTGTTGACTCTTTGACCAT+GGG - chr5_3:38667248-38667267 Msa0810330:intron 40.0%
ACTAATAGGAGTAGGACATG+TGG - chr5_3:38667303-38667322 Msa0810330:intron 40.0%
ATGTGGCGTAACTAACTTCT+TGG - chr5_3:38667320-38667339 Msa0810330:intron 40.0%
!! CACGAAATTTTGACGGAGAA+AGG + chr5_3:38667514-38667533 None:intergenic 40.0%
GAAATGACCAAAATGCCCTT+AGG - chr5_3:38667535-38667554 Msa0810330:intron 40.0%
!!! TTTAGTCCCTAAGGGCATTT+TGG + chr5_3:38667545-38667564 None:intergenic 40.0%
! AATCGGTGGGTTTAAAGAGT+AGG + chr5_3:38668228-38668247 None:intergenic 40.0%
TATTGTGAGGATGAATCGGT+GGG + chr5_3:38668241-38668260 None:intergenic 40.0%
! AAAGTGCTACCCTAGAAGTT+GGG + chr5_3:38668577-38668596 None:intergenic 40.0%
!! TAATGGCACGGTGTCATTAA+TGG + chr5_3:38668604-38668623 None:intergenic 40.0%
ACCAAGATAGATGTGTTGTG+TGG - chr5_3:38668628-38668647 Msa0810330:intron 40.0%
AACACATTGCCATTGCATCT+GGG + chr5_3:38668654-38668673 None:intergenic 40.0%
AAACACATTGCCATTGCATC+TGG + chr5_3:38668655-38668674 None:intergenic 40.0%
TTGGGTGATCATAGAAGTTG+GGG + chr5_3:38668719-38668738 None:intergenic 40.0%
GAGGCCATAAGTTCAAATCT+AGG + chr5_3:38668921-38668940 None:intergenic 40.0%
!! TGCAAAGAGAAAAGTGTTGG+AGG + chr5_3:38668940-38668959 None:intergenic 40.0%
AACAAAGAACGGCAACAAGT+TGG - chr5_3:38669284-38669303 Msa0810330:intron 40.0%
! GCAAATATAGCTTGTGACAG+AGG - chr5_3:38669403-38669422 Msa0810330:intron 40.0%
AACTACCGCTTAACAATACG+CGG + chr5_3:38669508-38669527 None:intergenic 40.0%
ATTGCTTGTGGACATCCTTT+AGG + chr5_3:38670080-38670099 None:intergenic 40.0%
TAGTTCACCTCTATTGCTTG+TGG + chr5_3:38670092-38670111 None:intergenic 40.0%
GCAATAGAGGTGAACTAGAT+TGG - chr5_3:38670095-38670114 Msa0810330:intron 40.0%
TTGTGGGCAAACAGCTAATA+TGG + chr5_3:38670243-38670262 None:intergenic 40.0%
AGAAGTAAGGGGATAGTGTT+AGG + chr5_3:38670424-38670443 None:intergenic 40.0%
GTTGTGTGGTTGTTTGCAAA+AGG + chr5_3:38670574-38670593 None:intergenic 40.0%
!! TTTTGGCAAATTGGGTTGTG+TGG + chr5_3:38670588-38670607 None:intergenic 40.0%
GTTGGAATTGAAGGCAATGT+TGG + chr5_3:38670611-38670630 None:intergenic 40.0%
GGCAATGTTGTTGGAATTGA+AGG + chr5_3:38670620-38670639 None:intergenic 40.0%
AAGGTTGGAATAGAAGGCAA+AGG + chr5_3:38670644-38670663 None:intergenic 40.0%
! AATGTTGGCATTGAAGGCAA+AGG + chr5_3:38661500-38661519 None:intergenic 40.0%
TTAGTAGGAATGCTAGGAAG+TGG + chr5_3:38670782-38670801 None:intergenic 40.0%
!! GTTGGATTAGTAGGAATGCT+AGG + chr5_3:38670788-38670807 None:intergenic 40.0%
! ATGGTGGAAAGTTGAGAGAT+GGG + chr5_3:38670814-38670833 None:intergenic 40.0%
! AATGGTGGAAAGTTGAGAGA+TGG + chr5_3:38670815-38670834 None:intergenic 40.0%
ATGTTGGGAAGTGAATTGGT+TGG + chr5_3:38670839-38670858 None:intergenic 40.0%
AGGAATGTTGGGAAGTGAAT+TGG + chr5_3:38670843-38670862 None:intergenic 40.0%
GGTTGAGATTGAAGGAATGT+TGG + chr5_3:38670855-38670874 None:intergenic 40.0%
GTGGGAATGCTTGGCAAATT+GGG + chr5_3:38661386-38661405 None:intergenic 45.0%
AGTGGGAATGCTTGGCAAAT+TGG + chr5_3:38661387-38661406 None:intergenic 45.0%
TTTGGCAAAGTGGGAATGCT+TGG + chr5_3:38661395-38661414 None:intergenic 45.0%
CAATGTTGGGTTTGGCAAAG+TGG + chr5_3:38661405-38661424 None:intergenic 45.0%
GTTGGGATTGAAGGCAATGT+TGG + chr5_3:38661419-38661438 None:intergenic 45.0%
! GGCAAAGGTGGTAATGTTGT+TGG + chr5_3:38661437-38661456 None:intergenic 45.0%
GTTGGAATAGAAGGCAAAGG+TGG + chr5_3:38661449-38661468 None:intergenic 45.0%
GTTGGGATTGAAGGCAATGT+TGG + chr5_3:38661419-38661438 None:intergenic 45.0%
GGCAATGTTGTTGGGATTGA+AGG + chr5_3:38661476-38661495 None:intergenic 45.0%
GCAAAGGTGGCAATGTTGTT+GGG + chr5_3:38661484-38661503 None:intergenic 45.0%
! TGAGGCAATGTTGGCATTGA+AGG + chr5_3:38661506-38661525 None:intergenic 45.0%
TCAATGCCAACATTGCCTCA+AGG - chr5_3:38661506-38661525 Msa0810330:CDS 45.0%
TTGGTAGGAATGCTAGGAAG+TGG + chr5_3:38661584-38661603 None:intergenic 45.0%
!! GTTGGATTGGTAGGAATGCT+AGG + chr5_3:38661590-38661609 None:intergenic 45.0%
!! GATGGAAGTGTTGGATTGGT+AGG + chr5_3:38661599-38661618 None:intergenic 45.0%
!! GAGAGATGGAAGTGTTGGAT+TGG + chr5_3:38661603-38661622 None:intergenic 45.0%
AATGGGGGAAAGTTGAGAGA+TGG + chr5_3:38661617-38661636 None:intergenic 45.0%
AAGTGAAGTGGATGGCAATG+GGG + chr5_3:38661633-38661652 None:intergenic 45.0%
GAAGTGAAGTGGATGGCAAT+GGG + chr5_3:38661634-38661653 None:intergenic 45.0%
GGTTGAGATTGAAGGAAGGT+TGG + chr5_3:38661657-38661676 None:intergenic 45.0%
CAAGATCAATGCATCCCACA+AGG - chr5_3:38662337-38662356 Msa0810330:intron 45.0%
CACATTAATTGCGAACACCC+AGG + chr5_3:38662521-38662540 None:intergenic 45.0%
ATGCAAGTGGGTGGATAACA+AGG + chr5_3:38663134-38663153 None:intergenic 45.0%
AAATGTTGCATGCAAGTGGG+TGG + chr5_3:38663143-38663162 None:intergenic 45.0%
! TTCGGGTTCTCGTTGATTGA+GGG + chr5_3:38663181-38663200 None:intergenic 45.0%
!! TTTCGGGTTCTCGTTGATTG+AGG + chr5_3:38663182-38663201 None:intergenic 45.0%
AGAACCCGAAAACGATGCTT+TGG - chr5_3:38663191-38663210 Msa0810330:intron 45.0%
GAACCCGAAAACGATGCTTT+GGG - chr5_3:38663192-38663211 Msa0810330:intron 45.0%
ATAGGAGAGTGGTGTTTAGG+AGG + chr5_3:38663237-38663256 None:intergenic 45.0%
! GATGATGGTGAAAGAGGAGA+TGG + chr5_3:38663462-38663481 None:intergenic 45.0%
!! TGGGAAAGCTTTGATGGTGT+TGG + chr5_3:38663545-38663564 None:intergenic 45.0%
! GATGCATGGGAAAGCTTTGA+TGG + chr5_3:38663551-38663570 None:intergenic 45.0%
TCTACTGCCCTTTCCTTCAA+AGG - chr5_3:38663744-38663763 Msa0810330:intron 45.0%
! GGTAGAGTATCCACCTTTGA+AGG + chr5_3:38663760-38663779 None:intergenic 45.0%
ACTCACTAGTCACTACTCAC+TGG + chr5_3:38663781-38663800 None:intergenic 45.0%
TGGGTACAAAAGAGGGTCTT+AGG + chr5_3:38664091-38664110 None:intergenic 45.0%
CCTTCGATACATATCAACGG+CGG - chr5_3:38664301-38664320 Msa0810330:intron 45.0%
AGCAAAACCCTTGAGAAACG+AGG - chr5_3:38664453-38664472 Msa0810330:intron 45.0%
!! TTTCGCTACGGGAAAGTGTT+AGG - chr5_3:38664488-38664507 Msa0810330:intron 45.0%
! CTTAAAAGGGTACGTAGGCA+AGG + chr5_3:38664693-38664712 None:intergenic 45.0%
! CTTGCCTACGTACCCTTTTA+AGG - chr5_3:38664691-38664710 Msa0810330:intron 45.0%
! GATCCCTTAAAAGGGTACGT+AGG + chr5_3:38664698-38664717 None:intergenic 45.0%
AATAAGAGAGAGAGGCCTCA+AGG - chr5_3:38664795-38664814 Msa0810330:intron 45.0%
ATAAGAGAGAGAGGCCTCAA+GGG - chr5_3:38664796-38664815 Msa0810330:intron 45.0%
TGTGATGTGTGTGCATGTGT+CGG - chr5_3:38665101-38665120 Msa0810330:intron 45.0%
!! AGTGAGTTTGCCCCTTGTTT+TGG + chr5_3:38665679-38665698 None:intergenic 45.0%
GACCGTAGGATTGATCCAAT+TGG - chr5_3:38666197-38666216 Msa0810330:intron 45.0%
CCTTCTTGATCGTTGGATCA+AGG + chr5_3:38666229-38666248 None:intergenic 45.0%
CCTTGATCCAACGATCAAGA+AGG - chr5_3:38666226-38666245 Msa0810330:intron 45.0%
TCCAACGATCAAGAAGGCAA+AGG - chr5_3:38666232-38666251 Msa0810330:intron 45.0%
CCAACGATCAAGAAGGCAAA+GGG - chr5_3:38666233-38666252 Msa0810330:intron 45.0%
CAACGATCAAGAAGGCAAAG+GGG - chr5_3:38666234-38666253 Msa0810330:intron 45.0%
ATGAGTGTAGTCATGCGCAT+AGG - chr5_3:38666263-38666282 Msa0810330:intron 45.0%
ACTTTCCCGTGACATTCATG+AGG + chr5_3:38666417-38666436 None:intergenic 45.0%
GGAAAGTTCAACAAACTCGC+CGG - chr5_3:38666430-38666449 Msa0810330:intron 45.0%
AAACTCGCCGGAATCTTCAT+AGG - chr5_3:38666442-38666461 Msa0810330:intron 45.0%
CCGGGTTCATATTCGAAAAG+AGG + chr5_3:38666561-38666580 None:intergenic 45.0%
GCGGCTATATGTGTAGATGT+AGG + chr5_3:38666609-38666628 None:intergenic 45.0%
ACACATATAGCCGCGCAAAT+TGG - chr5_3:38666615-38666634 Msa0810330:intron 45.0%
CAAAGCTTCGTCAAGCATCA+CGG + chr5_3:38666683-38666702 None:intergenic 45.0%
TCCTTTCTTTCGTCCGATTC+CGG - chr5_3:38666773-38666792 Msa0810330:intron 45.0%
CGAATTCAACAACGACGAAC+CGG + chr5_3:38666795-38666814 None:intergenic 45.0%
CGGTTCGTCGTTGTTGAATT+CGG - chr5_3:38666793-38666812 Msa0810330:intron 45.0%
GTTAGAGATGAAGGTTGTGG+TGG - chr5_3:38666962-38666981 Msa0810330:intron 45.0%
GATGAAGGTTGTGGTGGTTA+TGG - chr5_3:38666968-38666987 Msa0810330:intron 45.0%
! TGGTGGTTATGGAGGTTTTG+TGG - chr5_3:38666979-38666998 Msa0810330:intron 45.0%
!! ATGGTGGGTGAAGAAGATTG+TGG - chr5_3:38667011-38667030 Msa0810330:intron 45.0%
GTGAAGAAGATTGTGGTGGT+TGG - chr5_3:38667018-38667037 Msa0810330:intron 45.0%
!! GTTTGTTGTGGTGGTGGAAA+TGG - chr5_3:38667139-38667158 Msa0810330:intron 45.0%
!! GTGTGTTGACTCTTTGACCA+TGG - chr5_3:38667247-38667266 Msa0810330:intron 45.0%
GACCATGGGACCCATTATAT+AGG - chr5_3:38667262-38667281 Msa0810330:intron 45.0%
!! CACCTATATAATGGGTCCCA+TGG + chr5_3:38667267-38667286 None:intergenic 45.0%
TGAGTCAGTTTAGCCCCTAA+GGG + chr5_3:38667712-38667731 None:intergenic 45.0%
TTGAGTCAGTTTAGCCCCTA+AGG + chr5_3:38667713-38667732 None:intergenic 45.0%
! TAGGGTATAACACGATTCGG+TGG - chr5_3:38668164-38668183 Msa0810330:intron 45.0%
!! GAAGCACCGATAAGCCTAAA+TGG + chr5_3:38668190-38668209 None:intergenic 45.0%
GTATTGTGAGGATGAATCGG+TGG + chr5_3:38668242-38668261 None:intergenic 45.0%
! GGTCTTTGGTGAGTATTGTG+AGG + chr5_3:38668254-38668273 None:intergenic 45.0%
CCAACAAAGCCCAACTTCTA+GGG - chr5_3:38668565-38668584 Msa0810330:intron 45.0%
! CAAAGTGCTACCCTAGAAGT+TGG + chr5_3:38668578-38668597 None:intergenic 45.0%
!! CAACTTCTAGGGTAGCACTT+TGG - chr5_3:38668576-38668595 Msa0810330:intron 45.0%
GCCACACAACACATCTATCT+TGG + chr5_3:38668632-38668651 None:intergenic 45.0%
GCAATGGCAATGTGTTTGTG+TGG - chr5_3:38668658-38668677 Msa0810330:intron 45.0%
TAGAAGTTGGGGTAGCACTT+TGG + chr5_3:38668708-38668727 None:intergenic 45.0%
GCAACATATTCGACGGTTGT+TGG - chr5_3:38669315-38669334 Msa0810330:intron 45.0%
GTACTCCGCGTATTGTTAAG+CGG - chr5_3:38669500-38669519 Msa0810330:intron 45.0%
AGGATGTCCACAAGCAATAG+AGG - chr5_3:38670082-38670101 Msa0810330:intron 45.0%
GGGCAAACAGCTAATATGGT+TGG + chr5_3:38670239-38670258 None:intergenic 45.0%
GTTGGAATAGAAGGCAAAGG+TGG + chr5_3:38661449-38661468 None:intergenic 45.0%
GAAGGCAAGGTTGGAATAGA+AGG + chr5_3:38670650-38670669 None:intergenic 45.0%
TGTTGTTGGGATTGAAGGCA+AGG + chr5_3:38661423-38661442 None:intergenic 45.0%
GGCAATGTTGTTGGGATTGA+AGG + chr5_3:38661476-38661495 None:intergenic 45.0%
GCAAAGGTGGCAATGTTGTT+GGG + chr5_3:38661484-38661503 None:intergenic 45.0%
! TGAGGCAATGTTGGCATTGA+AGG + chr5_3:38661506-38661525 None:intergenic 45.0%
AATGGAGGAACATTGCCTTG+AGG + chr5_3:38670722-38670741 None:intergenic 45.0%
!! TAGTGAGCTTAGGCACTGAA+GGG + chr5_3:38670754-38670773 None:intergenic 45.0%
!! ATAGTGAGCTTAGGCACTGA+AGG + chr5_3:38670755-38670774 None:intergenic 45.0%
!! GATGGGAGTGTTGGATTAGT+AGG + chr5_3:38670797-38670816 None:intergenic 45.0%
! AAGTTGAGAGATGGGAGTGT+TGG + chr5_3:38670806-38670825 None:intergenic 45.0%
AGTGAATTGGTTGGCAATGG+TGG + chr5_3:38670830-38670849 None:intergenic 45.0%
GGAAGTGAATTGGTTGGCAA+TGG + chr5_3:38670833-38670852 None:intergenic 45.0%
GAAAGGGATGGAGGAGATAA+TGG + chr5_3:38670876-38670895 None:intergenic 45.0%
!! AAGGTGGTGGAGAGAAGAAA+GGG + chr5_3:38670892-38670911 None:intergenic 45.0%
GCAAAAGGTTGCGAGCTTCT+AGG + chr5_3:38661349-38661368 None:intergenic 50.0%
GGCAAAGGTGGCAATGTTGT+TGG + chr5_3:38661485-38661504 None:intergenic 50.0%
! GTTGGCATTGAAGGCAAAGG+TGG + chr5_3:38661497-38661516 None:intergenic 50.0%
GAAGGGATAGTAGGCAATGG+AGG + chr5_3:38661539-38661558 None:intergenic 50.0%
AGTGGTGGCATAGTGAGCTT+AGG + chr5_3:38661566-38661585 None:intergenic 50.0%
GTAGGAATGCTAGGAAGTGG+TGG + chr5_3:38661581-38661600 None:intergenic 50.0%
AGTGAAGTGGATGGCAATGG+GGG + chr5_3:38661632-38661651 None:intergenic 50.0%
GGAAGTGAAGTGGATGGCAA+TGG + chr5_3:38661635-38661654 None:intergenic 50.0%
AGGTTGGGAAGTGAAGTGGA+TGG + chr5_3:38661641-38661660 None:intergenic 50.0%
AGGAAGGTTGGGAAGTGAAG+TGG + chr5_3:38661645-38661664 None:intergenic 50.0%
CTTCAAGGGGAAGAGGTTGA+AGG + chr5_3:38661713-38661732 None:intergenic 50.0%
GGACATTGGTGGAGATGCAT+GGG + chr5_3:38663564-38663583 None:intergenic 50.0%
GAATTCTGCCTCTCGATGAC+TGG - chr5_3:38663704-38663723 Msa0810330:intron 50.0%
GATCCAAACCAGTCATCGAG+AGG + chr5_3:38663715-38663734 None:intergenic 50.0%
ACTGCCCTTTCCTTCAAAGG+TGG - chr5_3:38663747-38663766 Msa0810330:intron 50.0%
CCGCCGTTGATATGTATCGA+AGG + chr5_3:38664304-38664323 None:intergenic 50.0%
AACCCTTGAGAAACGAGGTC+CGG - chr5_3:38664458-38664477 Msa0810330:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG - chr5_3:38664476-38664495 Msa0810330:intron 50.0%
GCGCGCGTAGAAAGTAAAGA+CGG + chr5_3:38664545-38664564 None:intergenic 50.0%
GGATCTTGTGTGTTTGGGCT+TGG + chr5_3:38666154-38666173 None:intergenic 50.0%
GGTCCCTATTGCTTTCTGTG+TGG + chr5_3:38666181-38666200 None:intergenic 50.0%
CAGAAAGCAATAGGGACCGT+AGG - chr5_3:38666183-38666202 Msa0810330:intron 50.0%
CCCTTTGCCTTCTTGATCGT+TGG + chr5_3:38666236-38666255 None:intergenic 50.0%
ATCAAGAAGGCAAAGGGGCA+TGG - chr5_3:38666239-38666258 Msa0810330:intron 50.0%
CGGCGAACCTATGAAGATTC+CGG + chr5_3:38666452-38666471 None:intergenic 50.0%
CGGAATCTTCATAGGTTCGC+CGG - chr5_3:38666450-38666469 Msa0810330:intron 50.0%
AAATTCGAATCGGAGCTCGC+CGG + chr5_3:38666508-38666527 None:intergenic 50.0%
!! GACGAAGCTTTGAATGGCTC+CGG - chr5_3:38666691-38666710 Msa0810330:intron 50.0%
TGCAATCGAAGCAAAGGGAG+AGG + chr5_3:38666752-38666771 None:intergenic 50.0%
ACCGGAATCGGACGAAAGAA+AGG + chr5_3:38666777-38666796 None:intergenic 50.0%
CAACAACGACGAACCGGAAT+CGG + chr5_3:38666789-38666808 None:intergenic 50.0%
GAAGGTTGTGGTGGTTATGG+AGG - chr5_3:38666971-38666990 Msa0810330:intron 50.0%
GTGGGTGAAGAAGATTGTGG+TGG - chr5_3:38667014-38667033 Msa0810330:intron 50.0%
AGATTGTGGTGGTTGGAGAG+AGG - chr5_3:38667025-38667044 Msa0810330:intron 50.0%
! GTTATGGTGGTTTGAGGTGG+TGG - chr5_3:38667111-38667130 Msa0810330:intron 50.0%
!! GGTGGTGGAAATGGTGATGA+TGG - chr5_3:38667148-38667167 Msa0810330:intron 50.0%
CTCTTTCTTCTCTTAGGCCG+CGG + chr5_3:38667174-38667193 None:intergenic 50.0%
GCGGCCTAAGAGAAGAAAGA+GGG - chr5_3:38667173-38667192 Msa0810330:intron 50.0%
!! ACACGATTCGGTGGCCATTT+AGG - chr5_3:38668173-38668192 Msa0810330:intron 50.0%
CGGTGGCCATTTAGGCTTAT+CGG - chr5_3:38668181-38668200 Msa0810330:intron 50.0%
GCCAACAAAGCCCAACTTCT+AGG - chr5_3:38668564-38668583 Msa0810330:intron 50.0%
! CCCTAGAAGTTGGGCTTTGT+TGG + chr5_3:38668568-38668587 None:intergenic 50.0%
GGCAAAGGTGGCAATGTTGT+TGG + chr5_3:38661485-38661504 None:intergenic 50.0%
GTTGGGATTGAAGGCAAGGT+TGG + chr5_3:38670659-38670678 None:intergenic 50.0%
GGCAAAGGTGGCAATGTTGT+TGG + chr5_3:38661485-38661504 None:intergenic 50.0%
! GTTGGCATTGAAGGCAAAGG+TGG + chr5_3:38661497-38661516 None:intergenic 50.0%
CCTTGAGGTTGAGGCAATGT+TGG + chr5_3:38670707-38670726 None:intergenic 50.0%
CCAACATTGCCTCAACCTCA+AGG - chr5_3:38670704-38670723 Msa0810330:CDS 50.0%
GGAACATTGCCTTGAGGTTG+AGG + chr5_3:38670716-38670735 None:intergenic 50.0%
ACTGAAGGGATGGTAGGCAA+TGG + chr5_3:38670740-38670759 None:intergenic 50.0%
!! TTAGGCACTGAAGGGATGGT+AGG + chr5_3:38670746-38670765 None:intergenic 50.0%
AGTGGTGGCATAGTGAGCTT+AGG + chr5_3:38661566-38661585 None:intergenic 50.0%
GTAGGAATGCTAGGAAGTGG+TGG + chr5_3:38661581-38661600 None:intergenic 50.0%
TGGAGAGAAGAAAGGGATGG+AGG + chr5_3:38670885-38670904 None:intergenic 50.0%
TGGTGGAGAGAAGAAAGGGA+TGG + chr5_3:38670888-38670907 None:intergenic 50.0%
!! GAAGGTGGTGGAGAGAAGAA+AGG + chr5_3:38670893-38670912 None:intergenic 50.0%
GAAGGGGAAGGAGGAGATGA+TGG + chr5_3:38661678-38661697 None:intergenic 55.0%
CAAGGGGAAGAGGTTGAAGG+TGG + chr5_3:38661710-38661729 None:intergenic 55.0%
GGGACATTGGTGGAGATGCA+TGG + chr5_3:38663565-38663584 None:intergenic 55.0%
! CTGCCTCTCGATGACTGGTT+TGG - chr5_3:38663709-38663728 Msa0810330:intron 55.0%
ACCGTCATGAGACATGCGTG+AGG - chr5_3:38664198-38664217 Msa0810330:intron 55.0%
GCCTCACGCATGTCTCATGA+CGG + chr5_3:38664202-38664221 None:intergenic 55.0%
ACCCTTGAGAAACGAGGTCC+GGG - chr5_3:38664459-38664478 Msa0810330:intron 55.0%
TCCCGGACCTCGTTTCTCAA+GGG + chr5_3:38664463-38664482 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG + chr5_3:38664480-38664499 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG - chr5_3:38664477-38664496 Msa0810330:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG - chr5_3:38665113-38665132 Msa0810330:intron 55.0%
!! GGAAATGGTGATGATGGCCG+CGG - chr5_3:38667154-38667173 Msa0810330:intron 55.0%
CGCGGCCTAAGAGAAGAAAG+AGG - chr5_3:38667172-38667191 Msa0810330:intron 55.0%
GCGAAACTGACGCACACCTA+TGG + chr5_3:38668293-38668312 None:intergenic 55.0%
GTTGTGTGGCCCAGATGCAA+TGG - chr5_3:38668642-38668661 Msa0810330:intron 55.0%
GAAGGGATGGTAGGCAATGG+AGG + chr5_3:38670737-38670756 None:intergenic 55.0%
!! GAGCTTAGGCACTGAAGGGA+TGG + chr5_3:38670750-38670769 None:intergenic 55.0%
CAAGGGGTAGAGGTTGAAGG+TGG + chr5_3:38670908-38670927 None:intergenic 55.0%
GGAAGAGGTTGAAGGTGGCG+GGG + chr5_3:38661705-38661724 None:intergenic 60.0%
GGGAAGAGGTTGAAGGTGGC+GGG + chr5_3:38661706-38661725 None:intergenic 60.0%
GGGGAAGAGGTTGAAGGTGG+CGG + chr5_3:38661707-38661726 None:intergenic 60.0%
CTCCCGGACCTCGTTTCTCA+AGG + chr5_3:38664464-38664483 None:intergenic 60.0%
AATCGGAGCTCGCCGGAATC+CGG + chr5_3:38666501-38666520 None:intergenic 60.0%
GGGGTAGAGGTTGAAGGTGG+TGG + chr5_3:38670905-38670924 None:intergenic 60.0%
!! AAGGTGGCGGGGAGAGGAAG+GGG + chr5_3:38661694-38661713 None:intergenic 65.0%
!! GAAGGTGGCGGGGAGAGGAA+GGG + chr5_3:38661695-38661714 None:intergenic 65.0%
!! TGAAGGTGGCGGGGAGAGGA+AGG + chr5_3:38661696-38661715 None:intergenic 65.0%
!! AGGTTGAAGGTGGCGGGGAG+AGG + chr5_3:38661700-38661719 None:intergenic 65.0%
!! CCGGAATCCGGAAGTGTCGC+CGG + chr5_3:38666489-38666508 None:intergenic 65.0%
CCGGCGACACTTCCGGATTC+CGG - chr5_3:38666486-38666505 Msa0810330:intron 65.0%
CGGGGAGAGGAAGGGGAAGG+AGG + chr5_3:38661687-38661706 None:intergenic 70.0%
TGGCGGGGAGAGGAAGGGGA+AGG + chr5_3:38661690-38661709 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 38661284 38670928 38661284 ID=Msa0810330;Name=Msa0810330
chr5_3 mRNA 38661284 38670928 38661284 ID=Msa0810330-mRNA-1;Parent=Msa0810330;Name=Msa0810330-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|0|0|2|0|226
chr5_3 exon 38670685 38670928 38670685 ID=Msa0810330-mRNA-1:exon:11766;Parent=Msa0810330-mRNA-1
chr5_3 exon 38661284 38661720 38661284 ID=Msa0810330-mRNA-1:exon:11765;Parent=Msa0810330-mRNA-1
chr5_3 CDS 38670685 38670928 38670685 ID=Msa0810330-mRNA-1:cds;Parent=Msa0810330-mRNA-1
chr5_3 CDS 38661284 38661720 38661284 ID=Msa0810330-mRNA-1:cds;Parent=Msa0810330-mRNA-1
Gene Sequence

>Msa0810330

ATGGCCTCAGTGAAAACCTTCATCATATCTTTACTTCTTTTTGTTACCTTGTCAAACATGAGCCTAGAAGCTCGCAACCTTTTGCAAACAACTACACAACCCAATTTGCCAAGCATTCCCACTTTGCCAAACCCAACATTGCCTTCAATCCCAACAACATTACCACCTTTGCCTTCTATTCCAACATTGCCTTCAATCCCAACAACATTGCCACCTTTGCCTTCAATGCCAACATTGCCTCAAGTCATGGCCTCAATGAAAACCATCATCACATCTTTACTTCTTTTTGTTACCTTGTCAAACATGAGCATAGAAGCTCGCAACCTTTTGCAAACAACCACACAACCCAATTTGCCAAAACCAACATTGCCTTCAATTCCAACAACATTGCCACCTTTGCCTTCTATTCCAACCTTGCCTTCAATCCCAACAACATTGCCACCTTTGCCTTCAATGCCAACATTGCCTCAACCTCAAGGCAATGTTCCTCCATTGCCTACCATCCCTTCAGTGCCTAAGCTCACTATGCCACCACTTCCTAGCATTCCTACTAATCCAACACTCCCATCTCTCAACTTTCCACCATTGCCAACCAATTCACTTCCCAACATTCCTTCAATCTCAACCATTATCTCCTCCATCCCTTTCTTCTCTCCACCACCTTCAACCTCTACCCCTTGA

Protein sequence

>Msa0810330

MASVKTFIISLLLFVTLSNMSLEARNLLQTTTQPNLPSIPTLPNPTLPSIPTTLPPLPSIPTLPSIPTTLPPLPSMPTLPQVMASMKTIITSLLLFVTLSNMSIEARNLLQTTTQPNLPKPTLPSIPTTLPPLPSIPTLPSIPTTLPPLPSMPTLPQPQGNVPPLPTIPSVPKLTMPPLPSIPTNPTLPSLNFPPLPTNSLPNIPSISTIISSIPFFSPPPSTSTP*