Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1069690 | XP_013449453.1 | 93.878 | 196 | 10 | 2 | 1 | 196 | 1 | 194 | 5.58e-133 | 380 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1069690 | sp|Q949N0|NAC53_ARATH | 34.868 | 152 | 92 | 6 | 18 | 164 | 9 | 158 | 9.76e-21 | 92.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1069690 | I3SX53 | 93.878 | 196 | 10 | 2 | 1 | 196 | 1 | 194 | 2.66e-133 | 380 |
Gene ID | Type | Classification |
---|---|---|
Msa1069690 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1030550 | Msa1069690 | 0.931474 | 3.579677e-94 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1069690 | MtrunA17_Chr7g0251651 | 93.878 | 196 | 10 | 2 | 1 | 196 | 1 | 194 | 5.13e-137 | 380 |
Msa1069690 | MtrunA17_Chr7g0251671 | 71.429 | 140 | 39 | 1 | 18 | 157 | 10 | 148 | 5.45e-72 | 215 |
Msa1069690 | MtrunA17_Chr7g0251661 | 69.014 | 142 | 43 | 1 | 16 | 157 | 8 | 148 | 4.91e-71 | 212 |
Msa1069690 | MtrunA17_Chr2g0309891 | 32.911 | 158 | 98 | 5 | 16 | 167 | 4 | 159 | 5.20e-21 | 88.6 |
Msa1069690 | MtrunA17_Chr6g0481091 | 33.117 | 154 | 96 | 5 | 16 | 164 | 4 | 155 | 1.70e-20 | 85.5 |
Msa1069690 | MtrunA17_Chr4g0047841 | 34.932 | 146 | 84 | 6 | 18 | 157 | 15 | 155 | 3.15e-19 | 84.0 |
Msa1069690 | MtrunA17_Chr5g0442771 | 37.778 | 135 | 75 | 6 | 13 | 142 | 14 | 144 | 4.51e-19 | 83.2 |
Msa1069690 | MtrunA17_Chr2g0311651 | 31.383 | 188 | 93 | 9 | 13 | 174 | 18 | 195 | 6.51e-19 | 82.4 |
Msa1069690 | MtrunA17_Chr2g0311661 | 36.364 | 143 | 74 | 7 | 10 | 142 | 14 | 149 | 2.91e-18 | 80.5 |
Msa1069690 | MtrunA17_Chr5g0433781 | 35.606 | 132 | 76 | 5 | 16 | 142 | 4 | 131 | 3.01e-18 | 82.0 |
Msa1069690 | MtrunA17_Chr3g0109821 | 34.848 | 132 | 77 | 5 | 16 | 142 | 4 | 131 | 5.00e-18 | 81.3 |
Msa1069690 | MtrunA17_Chr6g0453131 | 31.507 | 146 | 94 | 4 | 5 | 147 | 2 | 144 | 1.29e-17 | 79.7 |
Msa1069690 | MtrunA17_Chr5g0417791 | 29.193 | 161 | 105 | 6 | 16 | 173 | 1 | 155 | 1.92e-17 | 77.8 |
Msa1069690 | MtrunA17_Chr8g0384721 | 30.216 | 139 | 89 | 5 | 12 | 147 | 1 | 134 | 4.38e-17 | 77.4 |
Msa1069690 | MtrunA17_Chr5g0417001 | 33.094 | 139 | 85 | 6 | 14 | 148 | 11 | 145 | 5.55e-17 | 77.8 |
Msa1069690 | MtrunA17_Chr7g0252971 | 31.618 | 136 | 79 | 5 | 18 | 142 | 8 | 140 | 8.80e-17 | 77.0 |
Msa1069690 | MtrunA17_Chr3g0130731 | 31.655 | 139 | 87 | 5 | 12 | 147 | 1 | 134 | 1.00e-16 | 76.3 |
Msa1069690 | MtrunA17_Chr3g0124761 | 31.852 | 135 | 84 | 4 | 16 | 147 | 5 | 134 | 1.05e-16 | 76.3 |
Msa1069690 | MtrunA17_Chr1g0147421 | 33.333 | 132 | 80 | 6 | 18 | 144 | 27 | 155 | 1.28e-16 | 76.6 |
Msa1069690 | MtrunA17_Chr5g0428991 | 29.744 | 195 | 122 | 6 | 5 | 186 | 12 | 204 | 1.60e-16 | 77.0 |
Msa1069690 | MtrunA17_Chr2g0318101 | 34.351 | 131 | 75 | 6 | 18 | 142 | 15 | 140 | 1.65e-16 | 76.3 |
Msa1069690 | MtrunA17_Chr4g0042561 | 28.571 | 161 | 104 | 7 | 17 | 173 | 8 | 161 | 1.83e-16 | 75.5 |
Msa1069690 | MtrunA17_Chr1g0201021 | 30.601 | 183 | 109 | 7 | 2 | 177 | 3 | 174 | 2.49e-16 | 76.3 |
Msa1069690 | MtrunA17_Chr6g0461661 | 32.824 | 131 | 81 | 5 | 16 | 142 | 16 | 143 | 2.70e-16 | 75.9 |
Msa1069690 | MtrunA17_Chr1g0183741 | 32.353 | 136 | 85 | 5 | 15 | 146 | 7 | 139 | 4.22e-16 | 74.3 |
Msa1069690 | MtrunA17_Chr8g0345711 | 32.308 | 130 | 81 | 4 | 18 | 142 | 12 | 139 | 5.65e-16 | 72.0 |
Msa1069690 | MtrunA17_Chr7g0214071 | 35.338 | 133 | 76 | 6 | 16 | 144 | 13 | 139 | 8.62e-16 | 73.2 |
Msa1069690 | MtrunA17_Chr4g0018391 | 28.750 | 160 | 108 | 5 | 18 | 173 | 7 | 164 | 1.24e-15 | 73.9 |
Msa1069690 | MtrunA17_Chr2g0316971 | 32.593 | 135 | 84 | 6 | 18 | 148 | 23 | 154 | 1.60e-15 | 73.6 |
Msa1069690 | MtrunA17_Chr6g0453451 | 34.932 | 146 | 87 | 7 | 1 | 142 | 2 | 143 | 1.63e-15 | 73.2 |
Msa1069690 | MtrunA17_Chr8g0345671 | 32.143 | 140 | 87 | 5 | 18 | 152 | 11 | 147 | 1.71e-15 | 73.6 |
Msa1069690 | MtrunA17_Chr3g0139331 | 32.061 | 131 | 82 | 6 | 18 | 144 | 11 | 138 | 1.92e-15 | 73.2 |
Msa1069690 | MtrunA17_Chr8g0361731 | 29.348 | 184 | 110 | 9 | 4 | 172 | 2 | 180 | 2.41e-15 | 73.2 |
Msa1069690 | MtrunA17_Chr3g0128151 | 33.571 | 140 | 82 | 5 | 12 | 142 | 10 | 147 | 2.80e-15 | 73.6 |
Msa1069690 | MtrunA17_Chr8g0345701 | 28.000 | 150 | 85 | 4 | 12 | 142 | 1 | 146 | 7.39e-15 | 69.3 |
Msa1069690 | MtrunA17_Chr6g0484441 | 28.571 | 154 | 103 | 6 | 18 | 168 | 5 | 154 | 1.16e-14 | 70.9 |
Msa1069690 | MtrunA17_Chr7g0261411 | 32.353 | 136 | 85 | 5 | 15 | 146 | 7 | 139 | 1.64e-14 | 70.1 |
Msa1069690 | MtrunA17_Chr4g0060931 | 30.827 | 133 | 85 | 6 | 13 | 142 | 12 | 140 | 1.86e-14 | 70.5 |
Msa1069690 | MtrunA17_Chr3g0144271 | 33.846 | 130 | 78 | 7 | 18 | 142 | 23 | 149 | 2.04e-14 | 70.9 |
Msa1069690 | MtrunA17_Chr4g0054791 | 27.485 | 171 | 118 | 3 | 14 | 179 | 2 | 171 | 2.13e-14 | 70.1 |
Msa1069690 | MtrunA17_Chr1g0197361 | 30.464 | 151 | 94 | 7 | 21 | 164 | 11 | 157 | 2.73e-14 | 70.5 |
Msa1069690 | MtrunA17_Chr3g0091921 | 31.579 | 133 | 84 | 6 | 13 | 142 | 11 | 139 | 2.76e-14 | 69.7 |
Msa1069690 | MtrunA17_Chr7g0263931 | 29.050 | 179 | 104 | 9 | 7 | 177 | 6 | 169 | 3.64e-14 | 69.7 |
Msa1069690 | MtrunA17_Chr8g0345691 | 31.343 | 134 | 77 | 5 | 18 | 142 | 12 | 139 | 3.83e-14 | 70.1 |
Msa1069690 | MtrunA17_Chr7g0253011 | 33.094 | 139 | 84 | 6 | 16 | 148 | 15 | 150 | 4.16e-14 | 69.7 |
Msa1069690 | MtrunA17_Chr8g0359921 | 32.824 | 131 | 79 | 6 | 16 | 142 | 12 | 137 | 4.41e-14 | 69.3 |
Msa1069690 | MtrunA17_Chr8g0372121 | 30.597 | 134 | 87 | 5 | 18 | 147 | 6 | 137 | 5.14e-14 | 68.9 |
Msa1069690 | MtrunA17_Chr4g0056541 | 28.571 | 161 | 105 | 7 | 18 | 172 | 7 | 163 | 5.48e-14 | 69.3 |
Msa1069690 | MtrunA17_Chr2g0326361 | 28.859 | 149 | 97 | 6 | 18 | 162 | 14 | 157 | 8.71e-14 | 68.6 |
Msa1069690 | MtrunA17_Chr5g0400461 | 29.240 | 171 | 101 | 7 | 15 | 174 | 3 | 164 | 1.50e-13 | 67.8 |
Msa1069690 | MtrunA17_Chr1g0197351 | 33.077 | 130 | 78 | 5 | 18 | 142 | 42 | 167 | 1.64e-13 | 68.2 |
Msa1069690 | MtrunA17_Chr5g0398971 | 27.820 | 133 | 91 | 4 | 18 | 146 | 7 | 138 | 1.90e-13 | 67.8 |
Msa1069690 | MtrunA17_Chr3g0130101 | 31.200 | 125 | 81 | 4 | 21 | 142 | 10 | 132 | 2.38e-13 | 67.4 |
Msa1069690 | MtrunA17_Chr3g0128111 | 32.000 | 125 | 80 | 4 | 21 | 142 | 45 | 167 | 2.71e-13 | 66.2 |
Msa1069690 | MtrunA17_Chr2g0318081 | 31.538 | 130 | 82 | 5 | 16 | 142 | 14 | 139 | 3.46e-13 | 67.0 |
Msa1069690 | MtrunA17_Chr5g0405211 | 30.233 | 129 | 84 | 5 | 18 | 142 | 8 | 134 | 9.86e-13 | 65.5 |
Msa1069690 | MtrunA17_Chr3g0092671 | 28.188 | 149 | 100 | 5 | 21 | 164 | 8 | 154 | 1.20e-12 | 65.9 |
Msa1069690 | MtrunA17_Chr2g0309331 | 30.075 | 133 | 88 | 4 | 16 | 144 | 8 | 139 | 1.48e-12 | 65.1 |
Msa1069690 | MtrunA17_Chr1g0200561 | 28.477 | 151 | 102 | 5 | 18 | 164 | 19 | 167 | 3.25e-12 | 64.3 |
Msa1069690 | MtrunA17_Chr8g0385991 | 28.395 | 162 | 101 | 8 | 17 | 169 | 13 | 168 | 3.78e-12 | 62.8 |
Msa1069690 | MtrunA17_Chr4g0076731 | 29.167 | 168 | 107 | 7 | 21 | 183 | 57 | 217 | 7.06e-12 | 63.5 |
Msa1069690 | MtrunA17_Chr4g0017921 | 32.824 | 131 | 82 | 6 | 18 | 144 | 8 | 136 | 1.85e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1069690 | AT3G10500.1 | 34.868 | 152 | 92 | 6 | 18 | 164 | 9 | 158 | 9.93e-22 | 92.4 |
Msa1069690 | AT5G13180.1 | 36.957 | 138 | 77 | 5 | 9 | 142 | 5 | 136 | 2.80e-21 | 88.2 |
Msa1069690 | AT5G04410.1 | 35.156 | 128 | 78 | 4 | 18 | 142 | 9 | 134 | 1.26e-20 | 89.4 |
Msa1069690 | AT3G03200.1 | 32.927 | 164 | 102 | 5 | 16 | 173 | 4 | 165 | 2.57e-20 | 88.2 |
Msa1069690 | AT5G17260.1 | 31.707 | 164 | 104 | 5 | 16 | 173 | 4 | 165 | 5.50e-20 | 87.0 |
Msa1069690 | AT3G17730.1 | 35.659 | 129 | 80 | 3 | 16 | 142 | 4 | 131 | 7.93e-20 | 84.3 |
Msa1069690 | AT1G54330.1 | 33.537 | 164 | 99 | 5 | 16 | 174 | 4 | 162 | 2.17e-19 | 84.0 |
Msa1069690 | AT1G65910.1 | 32.099 | 162 | 102 | 6 | 16 | 172 | 4 | 162 | 4.69e-19 | 84.7 |
Msa1069690 | AT5G39820.1 | 33.108 | 148 | 91 | 6 | 4 | 147 | 7 | 150 | 7.18e-19 | 83.2 |
Msa1069690 | AT2G24430.2 | 34.884 | 129 | 77 | 6 | 18 | 142 | 16 | 141 | 9.96e-19 | 82.4 |
Msa1069690 | AT2G24430.1 | 34.884 | 129 | 77 | 6 | 18 | 142 | 16 | 141 | 9.96e-19 | 82.4 |
Msa1069690 | AT3G12910.1 | 36.879 | 141 | 77 | 6 | 13 | 146 | 17 | 152 | 1.00e-18 | 82.4 |
Msa1069690 | AT1G76420.1 | 33.108 | 148 | 90 | 7 | 1 | 142 | 3 | 147 | 1.93e-18 | 82.0 |
Msa1069690 | AT1G61110.1 | 34.615 | 130 | 75 | 5 | 18 | 142 | 16 | 140 | 6.00e-18 | 80.5 |
Msa1069690 | AT3G04070.2 | 30.822 | 146 | 91 | 5 | 18 | 156 | 10 | 152 | 7.80e-18 | 80.5 |
Msa1069690 | AT1G01720.1 | 30.256 | 195 | 114 | 8 | 16 | 194 | 5 | 193 | 9.78e-18 | 79.3 |
Msa1069690 | AT2G33480.1 | 34.043 | 141 | 83 | 5 | 5 | 142 | 2 | 135 | 1.10e-17 | 79.0 |
Msa1069690 | AT2G33480.2 | 34.043 | 141 | 83 | 5 | 5 | 142 | 2 | 135 | 1.18e-17 | 79.0 |
Msa1069690 | AT3G04070.1 | 30.822 | 146 | 91 | 5 | 18 | 156 | 10 | 152 | 1.28e-17 | 79.7 |
Msa1069690 | AT5G14000.1 | 27.746 | 173 | 115 | 5 | 5 | 173 | 2 | 168 | 2.83e-17 | 76.6 |
Msa1069690 | AT5G07680.1 | 30.481 | 187 | 119 | 9 | 13 | 193 | 12 | 193 | 2.99e-17 | 78.6 |
Msa1069690 | AT5G07680.2 | 30.978 | 184 | 116 | 9 | 16 | 193 | 1 | 179 | 3.30e-17 | 78.2 |
Msa1069690 | AT5G08790.1 | 30.496 | 141 | 90 | 5 | 16 | 153 | 5 | 140 | 4.06e-17 | 77.8 |
Msa1069690 | AT1G77450.1 | 32.593 | 135 | 83 | 4 | 16 | 147 | 8 | 137 | 4.62e-17 | 77.0 |
Msa1069690 | AT1G26870.1 | 35.556 | 135 | 78 | 7 | 12 | 142 | 12 | 141 | 6.63e-17 | 78.2 |
Msa1069690 | AT2G43000.1 | 29.381 | 194 | 114 | 9 | 13 | 191 | 14 | 199 | 7.43e-17 | 77.0 |
Msa1069690 | AT5G18270.1 | 35.338 | 133 | 80 | 5 | 13 | 142 | 16 | 145 | 8.03e-17 | 77.4 |
Msa1069690 | AT5G63790.2 | 31.111 | 135 | 85 | 5 | 16 | 147 | 58 | 187 | 1.12e-16 | 77.0 |
Msa1069690 | AT5G63790.1 | 31.111 | 135 | 85 | 5 | 16 | 147 | 48 | 177 | 1.12e-16 | 77.0 |
Msa1069690 | AT3G10490.1 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 1.21e-16 | 75.9 |
Msa1069690 | AT5G18270.2 | 34.586 | 133 | 81 | 5 | 13 | 142 | 16 | 145 | 2.11e-16 | 76.3 |
Msa1069690 | AT3G15170.1 | 32.593 | 135 | 84 | 6 | 12 | 142 | 14 | 145 | 2.89e-16 | 75.9 |
Msa1069690 | AT3G10480.2 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 3.68e-16 | 76.3 |
Msa1069690 | AT5G53950.1 | 33.083 | 133 | 82 | 6 | 14 | 142 | 13 | 142 | 3.99e-16 | 75.9 |
Msa1069690 | AT3G10480.1 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 4.02e-16 | 76.3 |
Msa1069690 | AT5G61430.1 | 33.835 | 133 | 81 | 6 | 13 | 142 | 11 | 139 | 5.33e-16 | 75.1 |
Msa1069690 | AT2G27300.1 | 32.394 | 142 | 89 | 7 | 6 | 144 | 3 | 140 | 6.85e-16 | 74.7 |
Msa1069690 | AT1G34180.1 | 33.071 | 127 | 80 | 4 | 21 | 144 | 19 | 143 | 9.25e-16 | 75.1 |
Msa1069690 | AT1G34190.1 | 33.858 | 127 | 79 | 4 | 21 | 144 | 19 | 143 | 1.01e-15 | 75.1 |
Msa1069690 | AT3G10490.2 | 36.434 | 129 | 75 | 6 | 18 | 142 | 27 | 152 | 1.26e-15 | 74.7 |
Msa1069690 | AT5G14000.2 | 28.387 | 155 | 101 | 5 | 5 | 155 | 2 | 150 | 1.27e-15 | 71.2 |
Msa1069690 | AT3G29035.1 | 31.522 | 184 | 104 | 9 | 16 | 193 | 22 | 189 | 1.44e-15 | 73.9 |
Msa1069690 | AT1G34180.3 | 33.071 | 127 | 80 | 4 | 21 | 144 | 19 | 143 | 1.64e-15 | 74.3 |
Msa1069690 | AT3G15510.1 | 33.600 | 125 | 76 | 5 | 22 | 142 | 21 | 142 | 1.87e-15 | 73.9 |
Msa1069690 | AT5G39610.1 | 32.414 | 145 | 83 | 7 | 1 | 142 | 11 | 143 | 2.24e-15 | 72.8 |
Msa1069690 | AT5G46590.1 | 30.469 | 128 | 85 | 3 | 18 | 142 | 6 | 132 | 3.66e-15 | 72.4 |
Msa1069690 | AT5G46590.2 | 30.469 | 128 | 85 | 3 | 18 | 142 | 6 | 132 | 4.06e-15 | 72.0 |
Msa1069690 | AT5G66300.1 | 32.558 | 129 | 81 | 5 | 18 | 142 | 12 | 138 | 4.89e-15 | 72.0 |
Msa1069690 | AT4G17980.1 | 28.105 | 153 | 104 | 5 | 18 | 165 | 6 | 157 | 5.87e-15 | 71.6 |
Msa1069690 | AT1G69490.1 | 32.031 | 128 | 80 | 5 | 18 | 142 | 9 | 132 | 7.09e-15 | 71.2 |
Msa1069690 | AT3G04060.1 | 33.077 | 130 | 81 | 5 | 16 | 142 | 18 | 144 | 1.00e-14 | 71.6 |
Msa1069690 | AT4G35580.1 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.44e-14 | 71.6 |
Msa1069690 | AT5G24590.2 | 27.717 | 184 | 110 | 5 | 18 | 181 | 13 | 193 | 1.48e-14 | 71.6 |
Msa1069690 | AT4G17980.2 | 28.105 | 153 | 104 | 5 | 18 | 165 | 6 | 157 | 1.56e-14 | 70.9 |
Msa1069690 | AT4G35580.2 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.75e-14 | 71.6 |
Msa1069690 | AT4G35580.3 | 28.643 | 199 | 114 | 7 | 18 | 192 | 9 | 203 | 1.86e-14 | 71.2 |
Msa1069690 | AT4G27410.2 | 29.167 | 168 | 109 | 7 | 16 | 178 | 12 | 174 | 2.60e-14 | 70.1 |
Msa1069690 | AT1G79580.3 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.80e-14 | 70.5 |
Msa1069690 | AT1G79580.5 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.80e-14 | 70.5 |
Msa1069690 | AT1G79580.4 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.80e-14 | 70.5 |
Msa1069690 | AT1G79580.2 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.80e-14 | 70.5 |
Msa1069690 | AT1G79580.1 | 30.534 | 131 | 86 | 4 | 16 | 142 | 15 | 144 | 2.80e-14 | 70.5 |
Msa1069690 | AT3G12977.1 | 31.884 | 138 | 86 | 6 | 18 | 151 | 18 | 151 | 5.34e-14 | 68.9 |
Msa1069690 | AT1G33060.1 | 32.624 | 141 | 90 | 5 | 5 | 142 | 11 | 149 | 7.81e-14 | 69.7 |
Msa1069690 | AT1G33060.2 | 32.624 | 141 | 90 | 5 | 5 | 142 | 11 | 149 | 7.82e-14 | 69.7 |
Msa1069690 | AT1G12260.2 | 28.387 | 155 | 105 | 5 | 18 | 168 | 7 | 159 | 8.23e-14 | 68.9 |
Msa1069690 | AT5G62380.2 | 28.777 | 139 | 93 | 5 | 12 | 146 | 1 | 137 | 9.97e-14 | 68.9 |
Msa1069690 | AT5G62380.1 | 28.777 | 139 | 93 | 5 | 12 | 146 | 1 | 137 | 9.97e-14 | 68.9 |
Msa1069690 | AT1G12260.1 | 28.387 | 155 | 105 | 5 | 18 | 168 | 7 | 159 | 1.33e-13 | 68.6 |
Msa1069690 | AT1G62700.1 | 27.329 | 161 | 111 | 5 | 17 | 173 | 6 | 164 | 1.59e-13 | 68.6 |
Msa1069690 | AT1G62700.2 | 27.329 | 161 | 111 | 5 | 17 | 173 | 6 | 164 | 1.59e-13 | 68.6 |
Msa1069690 | AT1G02230.1 | 30.714 | 140 | 86 | 4 | 16 | 148 | 1 | 136 | 2.02e-13 | 68.2 |
Msa1069690 | AT4G36160.2 | 29.630 | 135 | 89 | 5 | 12 | 142 | 8 | 140 | 2.24e-13 | 68.2 |
Msa1069690 | AT4G36160.1 | 29.630 | 135 | 89 | 5 | 12 | 142 | 4 | 136 | 2.26e-13 | 67.8 |
Msa1069690 | AT4G36160.3 | 29.630 | 135 | 89 | 5 | 12 | 142 | 4 | 136 | 2.26e-13 | 67.8 |
Msa1069690 | AT1G52890.1 | 31.538 | 130 | 82 | 5 | 16 | 142 | 12 | 137 | 2.50e-13 | 67.4 |
Msa1069690 | AT1G34180.2 | 30.216 | 139 | 80 | 5 | 21 | 144 | 19 | 155 | 2.56e-13 | 68.2 |
Msa1069690 | AT3G18400.1 | 32.812 | 128 | 79 | 6 | 18 | 142 | 5 | 128 | 3.52e-13 | 67.0 |
Msa1069690 | AT1G34180.4 | 30.216 | 139 | 80 | 5 | 21 | 144 | 19 | 155 | 4.62e-13 | 67.4 |
Msa1069690 | AT1G71930.2 | 31.008 | 129 | 83 | 5 | 18 | 142 | 9 | 135 | 6.31e-13 | 66.6 |
Msa1069690 | AT1G71930.1 | 31.008 | 129 | 83 | 5 | 18 | 142 | 9 | 135 | 6.31e-13 | 66.6 |
Msa1069690 | AT3G15500.1 | 30.769 | 130 | 83 | 4 | 16 | 142 | 12 | 137 | 6.39e-13 | 66.2 |
Msa1069690 | AT5G09330.5 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.42e-13 | 67.0 |
Msa1069690 | AT5G09330.2 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.42e-13 | 67.0 |
Msa1069690 | AT5G09330.4 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.42e-13 | 67.0 |
Msa1069690 | AT5G09330.3 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.42e-13 | 67.0 |
Msa1069690 | AT5G09330.1 | 33.333 | 129 | 81 | 5 | 17 | 142 | 5 | 131 | 6.42e-13 | 67.0 |
Msa1069690 | AT2G18060.3 | 28.571 | 133 | 89 | 5 | 14 | 142 | 5 | 135 | 1.64e-12 | 65.5 |
Msa1069690 | AT2G18060.1 | 28.571 | 133 | 89 | 5 | 14 | 142 | 5 | 135 | 1.64e-12 | 65.5 |
Msa1069690 | AT1G32510.1 | 30.216 | 139 | 83 | 5 | 15 | 142 | 3 | 138 | 3.81e-12 | 63.9 |
Msa1069690 | AT4G27410.3 | 26.230 | 183 | 112 | 7 | 16 | 178 | 12 | 191 | 6.04e-12 | 63.5 |
Msa1069690 | AT4G28530.1 | 30.405 | 148 | 80 | 6 | 15 | 142 | 7 | 151 | 8.25e-12 | 63.5 |
Msa1069690 | AT4G01540.3 | 28.342 | 187 | 119 | 9 | 16 | 193 | 2 | 182 | 1.28e-11 | 63.2 |
Msa1069690 | AT4G01540.4 | 28.342 | 187 | 119 | 9 | 16 | 193 | 2 | 182 | 1.40e-11 | 62.8 |
Msa1069690 | AT4G01540.2 | 28.342 | 187 | 119 | 9 | 16 | 193 | 2 | 182 | 1.53e-11 | 62.8 |
Msa1069690 | AT4G01540.1 | 28.342 | 187 | 119 | 9 | 16 | 193 | 2 | 182 | 1.69e-11 | 62.8 |
Msa1069690 | AT3G49530.1 | 28.906 | 128 | 87 | 3 | 18 | 142 | 13 | 139 | 2.09e-11 | 62.4 |
Msa1069690 | AT1G33280.1 | 31.298 | 131 | 84 | 5 | 18 | 144 | 8 | 136 | 2.25e-11 | 62.0 |
Msa1069690 | AT3G49530.2 | 28.906 | 128 | 87 | 3 | 18 | 142 | 13 | 139 | 2.74e-11 | 62.0 |
Msa1069690 | AT4G10350.1 | 31.298 | 131 | 84 | 5 | 18 | 144 | 9 | 137 | 3.82e-11 | 61.2 |
Msa1069690 | AT3G44350.2 | 27.500 | 200 | 121 | 8 | 15 | 193 | 2 | 198 | 4.62e-11 | 60.5 |
Msa1069690 | AT5G64530.2 | 30.534 | 131 | 76 | 6 | 16 | 144 | 1 | 118 | 6.74e-11 | 58.5 |
Msa1069690 | AT1G32770.1 | 29.197 | 137 | 91 | 5 | 10 | 142 | 8 | 142 | 7.59e-11 | 60.5 |
Msa1069690 | AT1G32870.3 | 28.070 | 171 | 110 | 6 | 1 | 165 | 30 | 193 | 8.28e-11 | 60.8 |
Find 57 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCATTGTCTTCAATTTAT+AGG | 0.223937 | 7_2:-65472670 | None:intergenic |
TGAAATTACCTGTTGGATTC+AGG | 0.250804 | 7_2:+65472799 | Msa1069690:CDS |
GAAAGAACACATTTGTTTAC+TGG | 0.255170 | 7_2:+65473294 | Msa1069690:CDS |
CTTCACTTGCTAAGAACTTT+TGG | 0.256930 | 7_2:+65472722 | Msa1069690:five_prime_UTR |
GGTACTATTTCTTTGATATC+AGG | 0.295817 | 7_2:+65473165 | Msa1069690:CDS |
GAACCGTAGGTTCGAAAATA+TGG | 0.299363 | 7_2:+65473187 | Msa1069690:CDS |
AAAGCATAGTGAGCTAGTTT+TGG | 0.338409 | 7_2:+65472767 | Msa1069690:CDS |
AGAAATGAAACATGAGTTCA+TGG | 0.371014 | 7_2:-65473766 | None:intergenic |
TCGAATTCTGACAGGACATT+TGG | 0.373254 | 7_2:-65472888 | None:intergenic |
CAGGAATTGAGGTTTGTGCT+TGG | 0.441832 | 7_2:+65473894 | Msa1069690:three_prime_UTR |
GAATTTAGTTGTAAGTCCTA+TGG | 0.472907 | 7_2:+65473840 | Msa1069690:three_prime_UTR |
TGAGTTCATGGAGAGGGAGG+AGG | 0.476558 | 7_2:-65473754 | None:intergenic |
GGATCAAACCTGAATCCAAC+AGG | 0.478056 | 7_2:-65472807 | None:intergenic |
AAATCAATCACTGTTGGTGT+GGG | 0.492009 | 7_2:-65473703 | None:intergenic |
ACAGGACATTTGGAAGAGGT+TGG | 0.514459 | 7_2:-65472878 | None:intergenic |
GAGTTCATGGAGAGGGAGGA+GGG | 0.516664 | 7_2:-65473753 | None:intergenic |
AATATGGATGCAAGAAGAGC+TGG | 0.518416 | 7_2:+65473203 | Msa1069690:CDS |
GAGCCATGGAAGCTGCCAAA+AGG | 0.533677 | 7_2:+65472924 | Msa1069690:CDS |
GAAATCAATCACTGTTGGTG+TGG | 0.538024 | 7_2:-65473704 | None:intergenic |
GAAGAGCTGGAAATGGTGAA+TGG | 0.539470 | 7_2:+65473216 | Msa1069690:CDS |
AGTTCATGGAGAGGGAGGAG+GGG | 0.541559 | 7_2:-65473752 | None:intergenic |
TTTGTTTACTGGAGAATGCA+AGG | 0.541628 | 7_2:+65473305 | Msa1069690:CDS |
CTATCGGATATTTAAGATGA+AGG | 0.543622 | 7_2:+65473657 | Msa1069690:CDS |
TCTACAAGCTCATGATCAGT+TGG | 0.547810 | 7_2:-65472828 | None:intergenic |
GAAATACATCGAATTCTGAC+AGG | 0.551455 | 7_2:-65472896 | None:intergenic |
GGACCTCTTCAAAGCATATG+AGG | 0.554252 | 7_2:+65473144 | Msa1069690:CDS |
ATTGAGAATAATTGTTGTGT+GGG | 0.561181 | 7_2:+65474002 | Msa1069690:three_prime_UTR |
TCTGACAGGACATTTGGAAG+AGG | 0.561916 | 7_2:-65472882 | None:intergenic |
ATGTATTTCAAACTGAGCCA+TGG | 0.561975 | 7_2:+65472910 | Msa1069690:CDS |
TGAAACATGAGTTCATGGAG+AGG | 0.563520 | 7_2:-65473761 | None:intergenic |
ATAATGCACATAATTAGTAA+AGG | 0.565113 | 7_2:-65473966 | None:intergenic |
GATGGTATGAAATTACCTGT+TGG | 0.565216 | 7_2:+65472792 | Msa1069690:CDS |
GATGCAAGAAGAGCTGGAAA+TGG | 0.566075 | 7_2:+65473209 | Msa1069690:CDS |
AATTGAGAATAATTGTTGTG+TGG | 0.569112 | 7_2:+65474001 | Msa1069690:three_prime_UTR |
ATCAATCACTGTTGGTGTGG+GGG | 0.572846 | 7_2:-65473701 | None:intergenic |
AAGCAACAATCAGCATCACT+TGG | 0.576110 | 7_2:-65474040 | None:intergenic |
ATGTAGGTGTACTCAGCTGT+AGG | 0.589112 | 7_2:+65473631 | Msa1069690:intron |
ACTCAGCTGTAGGTGCCTAT+CGG | 0.590616 | 7_2:+65473641 | Msa1069690:CDS |
GTACCTCATATGCTTTGAAG+AGG | 0.594155 | 7_2:-65473147 | None:intergenic |
TCTTTGATATCAGGAACCGT+AGG | 0.597083 | 7_2:+65473174 | Msa1069690:CDS |
GAGAGAGAAAGAGAGAGACC+AGG | 0.598361 | 7_2:-65472621 | None:intergenic |
AGAGACACTTGCATCTTCCA+TGG | 0.599268 | 7_2:-65473728 | None:intergenic |
CTTCATCTTAAATATCCGAT+AGG | 0.611455 | 7_2:-65473656 | None:intergenic |
ACATGAGTTCATGGAGAGGG+AGG | 0.614894 | 7_2:-65473757 | None:intergenic |
GTGAATGGAGAATATATGAG+AGG | 0.620604 | 7_2:+65473231 | Msa1069690:CDS |
GAAACATGAGTTCATGGAGA+GGG | 0.632009 | 7_2:-65473760 | None:intergenic |
AATCAATCACTGTTGGTGTG+GGG | 0.641402 | 7_2:-65473702 | None:intergenic |
TTGTAGATTATTATCTGACG+AGG | 0.656467 | 7_2:+65472844 | Msa1069690:CDS |
AGGATGCATGAATTTGTCAT+CGG | 0.657194 | 7_2:+65473356 | Msa1069690:CDS |
GTCAAGCTCTGATGACACAA+TGG | 0.657620 | 7_2:+65473333 | Msa1069690:CDS |
ATGGTGAAATCAATCACTGT+TGG | 0.663372 | 7_2:-65473709 | None:intergenic |
TCGGATATTTAAGATGAAGG+TGG | 0.674233 | 7_2:+65473660 | Msa1069690:CDS |
AACAGTGATTGATTTCACCA+TGG | 0.680653 | 7_2:+65473711 | Msa1069690:CDS |
GAGAATATATGAGAGGAACG+AGG | 0.682363 | 7_2:+65473238 | Msa1069690:CDS |
AAGCTCTGATGACACAATGG+AGG | 0.685488 | 7_2:+65473336 | Msa1069690:CDS |
CAAGTGAAGAAAGAGTTGTG+TGG | 0.710718 | 7_2:-65472708 | None:intergenic |
GTTTACTGGAGAATGCAAGG+AGG | 0.781160 | 7_2:+65473308 | Msa1069690:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAACTAAAAAAAAATATGA+TGG | - | chr7_2:65473818-65473837 | None:intergenic | 10.0% |
!! | TAAACTAAAAAAAAATATGA+TGG | - | chr7_2:65473818-65473837 | None:intergenic | 10.0% |
!! | ATCATAAGAAAAAGAATGAA+GGG | - | chr7_2:65472965-65472984 | None:intergenic | 20.0% |
!!! | ACACAAGGAAAATTTTAAAA+GGG | - | chr7_2:65473026-65473045 | None:intergenic | 20.0% |
!!! | AACACAAGGAAAATTTTAAA+AGG | - | chr7_2:65473027-65473046 | None:intergenic | 20.0% |
!! | CCATCATAAGATTAATTAAA+GGG | - | chr7_2:65473058-65473077 | None:intergenic | 20.0% |
!! | TCCATCATAAGATTAATTAA+AGG | - | chr7_2:65473059-65473078 | None:intergenic | 20.0% |
!!! | TACAATTTTTCATCAAACTA+AGG | + | chr7_2:65473379-65473398 | Msa1069690:CDS | 20.0% |
!! | ATCACTATAAAAAAACTATG+AGG | + | chr7_2:65473471-65473490 | Msa1069690:intron | 20.0% |
!!! | TTTGAAGTAATAATGTGTTT+TGG | + | chr7_2:65473500-65473519 | Msa1069690:intron | 20.0% |
!!! | TTTTGAACTCAAATTAATGT+AGG | + | chr7_2:65473615-65473634 | Msa1069690:intron | 20.0% |
!! | ATAATGCACATAATTAGTAA+AGG | - | chr7_2:65473969-65473988 | None:intergenic | 20.0% |
!! | ATCATAAGAAAAAGAATGAA+GGG | - | chr7_2:65472965-65472984 | None:intergenic | 20.0% |
!!! | ACACAAGGAAAATTTTAAAA+GGG | - | chr7_2:65473026-65473045 | None:intergenic | 20.0% |
!!! | AACACAAGGAAAATTTTAAA+AGG | - | chr7_2:65473027-65473046 | None:intergenic | 20.0% |
!! | CCATCATAAGATTAATTAAA+GGG | - | chr7_2:65473058-65473077 | None:intergenic | 20.0% |
!! | TCCATCATAAGATTAATTAA+AGG | - | chr7_2:65473059-65473078 | None:intergenic | 20.0% |
!!! | TACAATTTTTCATCAAACTA+AGG | + | chr7_2:65473379-65473398 | Msa1069690:CDS | 20.0% |
!! | ATCACTATAAAAAAACTATG+AGG | + | chr7_2:65473471-65473490 | Msa1069690:intron | 20.0% |
!!! | TTTGAAGTAATAATGTGTTT+TGG | + | chr7_2:65473500-65473519 | Msa1069690:intron | 20.0% |
!!! | TTTTGAACTCAAATTAATGT+AGG | + | chr7_2:65473615-65473634 | Msa1069690:intron | 20.0% |
!! | ATAATGCACATAATTAGTAA+AGG | - | chr7_2:65473969-65473988 | None:intergenic | 20.0% |
!! | AAGCATTGTCTTCAATTTAT+AGG | - | chr7_2:65472673-65472692 | None:intergenic | 25.0% |
!! | CTATAATTTCACAAACCTTT+TGG | - | chr7_2:65472942-65472961 | None:intergenic | 25.0% |
! | GATCATAAGAAAAAGAATGA+AGG | - | chr7_2:65472966-65472985 | None:intergenic | 25.0% |
! | CCCTTTAATTAATCTTATGA+TGG | + | chr7_2:65473055-65473074 | Msa1069690:intron | 25.0% |
!!! | ATTTGTTTTCTGCAGATAAT+AGG | + | chr7_2:65473123-65473142 | Msa1069690:intron | 25.0% |
!!! | AAACATGTTTTTTTGTCCAT+AGG | - | chr7_2:65473859-65473878 | None:intergenic | 25.0% |
!!! | GTTTTATCTTTCTAGTTTTC+AGG | + | chr7_2:65473875-65473894 | Msa1069690:three_prime_UTR | 25.0% |
! | AATTGAGAATAATTGTTGTG+TGG | + | chr7_2:65474001-65474020 | Msa1069690:three_prime_UTR | 25.0% |
! | ATTGAGAATAATTGTTGTGT+GGG | + | chr7_2:65474002-65474021 | Msa1069690:three_prime_UTR | 25.0% |
!! | AAGCATTGTCTTCAATTTAT+AGG | - | chr7_2:65472673-65472692 | None:intergenic | 25.0% |
!! | CTATAATTTCACAAACCTTT+TGG | - | chr7_2:65472942-65472961 | None:intergenic | 25.0% |
! | GATCATAAGAAAAAGAATGA+AGG | - | chr7_2:65472966-65472985 | None:intergenic | 25.0% |
! | CCCTTTAATTAATCTTATGA+TGG | + | chr7_2:65473055-65473074 | Msa1069690:intron | 25.0% |
!!! | ATTTGTTTTCTGCAGATAAT+AGG | + | chr7_2:65473123-65473142 | Msa1069690:intron | 25.0% |
!!! | AAACATGTTTTTTTGTCCAT+AGG | - | chr7_2:65473859-65473878 | None:intergenic | 25.0% |
!!! | GTTTTATCTTTCTAGTTTTC+AGG | + | chr7_2:65473875-65473894 | Msa1069690:three_prime_UTR | 25.0% |
! | AATTGAGAATAATTGTTGTG+TGG | + | chr7_2:65474001-65474020 | Msa1069690:three_prime_UTR | 25.0% |
! | ATTGAGAATAATTGTTGTGT+GGG | + | chr7_2:65474002-65474021 | Msa1069690:three_prime_UTR | 25.0% |
TTGTAGATTATTATCTGACG+AGG | + | chr7_2:65472844-65472863 | Msa1069690:CDS | 30.0% | |
! | GGTACTATTTCTTTGATATC+AGG | + | chr7_2:65473165-65473184 | Msa1069690:CDS | 30.0% |
GAAAGAACACATTTGTTTAC+TGG | + | chr7_2:65473294-65473313 | Msa1069690:CDS | 30.0% | |
!!! | TGCTAGTTTTATGCAAAAAG+TGG | + | chr7_2:65473542-65473561 | Msa1069690:intron | 30.0% |
CTTCATCTTAAATATCCGAT+AGG | - | chr7_2:65473659-65473678 | None:intergenic | 30.0% | |
! | CTATCGGATATTTAAGATGA+AGG | + | chr7_2:65473657-65473676 | Msa1069690:CDS | 30.0% |
AGAAATGAAACATGAGTTCA+TGG | - | chr7_2:65473769-65473788 | None:intergenic | 30.0% | |
GAATTTAGTTGTAAGTCCTA+TGG | + | chr7_2:65473840-65473859 | Msa1069690:three_prime_UTR | 30.0% | |
!!! | TTTCTAGTTTTCAGGAATTG+AGG | + | chr7_2:65473883-65473902 | Msa1069690:three_prime_UTR | 30.0% |
TTGTAGATTATTATCTGACG+AGG | + | chr7_2:65472844-65472863 | Msa1069690:CDS | 30.0% | |
! | GGTACTATTTCTTTGATATC+AGG | + | chr7_2:65473165-65473184 | Msa1069690:CDS | 30.0% |
GAAAGAACACATTTGTTTAC+TGG | + | chr7_2:65473294-65473313 | Msa1069690:CDS | 30.0% | |
!!! | TGCTAGTTTTATGCAAAAAG+TGG | + | chr7_2:65473542-65473561 | Msa1069690:intron | 30.0% |
CTTCATCTTAAATATCCGAT+AGG | - | chr7_2:65473659-65473678 | None:intergenic | 30.0% | |
! | CTATCGGATATTTAAGATGA+AGG | + | chr7_2:65473657-65473676 | Msa1069690:CDS | 30.0% |
AGAAATGAAACATGAGTTCA+TGG | - | chr7_2:65473769-65473788 | None:intergenic | 30.0% | |
GAATTTAGTTGTAAGTCCTA+TGG | + | chr7_2:65473840-65473859 | Msa1069690:three_prime_UTR | 30.0% | |
!!! | TTTCTAGTTTTCAGGAATTG+AGG | + | chr7_2:65473883-65473902 | Msa1069690:three_prime_UTR | 30.0% |
!! | CTTCACTTGCTAAGAACTTT+TGG | + | chr7_2:65472722-65472741 | Msa1069690:five_prime_UTR | 35.0% |
!! | AAAGCATAGTGAGCTAGTTT+TGG | + | chr7_2:65472767-65472786 | Msa1069690:CDS | 35.0% |
GATGGTATGAAATTACCTGT+TGG | + | chr7_2:65472792-65472811 | Msa1069690:CDS | 35.0% | |
TGAAATTACCTGTTGGATTC+AGG | + | chr7_2:65472799-65472818 | Msa1069690:CDS | 35.0% | |
GAAATACATCGAATTCTGAC+AGG | - | chr7_2:65472899-65472918 | None:intergenic | 35.0% | |
ATGTATTTCAAACTGAGCCA+TGG | + | chr7_2:65472910-65472929 | Msa1069690:CDS | 35.0% | |
AAAGGGTTTCAAAGAACACA+AGG | - | chr7_2:65473041-65473060 | None:intergenic | 35.0% | |
! | CATCCATATTTTCGAACCTA+CGG | - | chr7_2:65473193-65473212 | None:intergenic | 35.0% |
GTGAATGGAGAATATATGAG+AGG | + | chr7_2:65473231-65473250 | Msa1069690:CDS | 35.0% | |
TTTGTTTACTGGAGAATGCA+AGG | + | chr7_2:65473305-65473324 | Msa1069690:CDS | 35.0% | |
AGGATGCATGAATTTGTCAT+CGG | + | chr7_2:65473356-65473375 | Msa1069690:CDS | 35.0% | |
! | TCGGATATTTAAGATGAAGG+TGG | + | chr7_2:65473660-65473679 | Msa1069690:CDS | 35.0% |
AAATCAATCACTGTTGGTGT+GGG | - | chr7_2:65473706-65473725 | None:intergenic | 35.0% | |
ATGGTGAAATCAATCACTGT+TGG | - | chr7_2:65473712-65473731 | None:intergenic | 35.0% | |
! | AACAGTGATTGATTTCACCA+TGG | + | chr7_2:65473711-65473730 | Msa1069690:CDS | 35.0% |
!! | CTTCACTTGCTAAGAACTTT+TGG | + | chr7_2:65472722-65472741 | Msa1069690:five_prime_UTR | 35.0% |
!! | AAAGCATAGTGAGCTAGTTT+TGG | + | chr7_2:65472767-65472786 | Msa1069690:CDS | 35.0% |
GATGGTATGAAATTACCTGT+TGG | + | chr7_2:65472792-65472811 | Msa1069690:CDS | 35.0% | |
TGAAATTACCTGTTGGATTC+AGG | + | chr7_2:65472799-65472818 | Msa1069690:CDS | 35.0% | |
GAAATACATCGAATTCTGAC+AGG | - | chr7_2:65472899-65472918 | None:intergenic | 35.0% | |
ATGTATTTCAAACTGAGCCA+TGG | + | chr7_2:65472910-65472929 | Msa1069690:CDS | 35.0% | |
AAAGGGTTTCAAAGAACACA+AGG | - | chr7_2:65473041-65473060 | None:intergenic | 35.0% | |
! | CATCCATATTTTCGAACCTA+CGG | - | chr7_2:65473193-65473212 | None:intergenic | 35.0% |
GTGAATGGAGAATATATGAG+AGG | + | chr7_2:65473231-65473250 | Msa1069690:CDS | 35.0% | |
TTTGTTTACTGGAGAATGCA+AGG | + | chr7_2:65473305-65473324 | Msa1069690:CDS | 35.0% | |
AGGATGCATGAATTTGTCAT+CGG | + | chr7_2:65473356-65473375 | Msa1069690:CDS | 35.0% | |
! | TCGGATATTTAAGATGAAGG+TGG | + | chr7_2:65473660-65473679 | Msa1069690:CDS | 35.0% |
AAATCAATCACTGTTGGTGT+GGG | - | chr7_2:65473706-65473725 | None:intergenic | 35.0% | |
ATGGTGAAATCAATCACTGT+TGG | - | chr7_2:65473712-65473731 | None:intergenic | 35.0% | |
! | AACAGTGATTGATTTCACCA+TGG | + | chr7_2:65473711-65473730 | Msa1069690:CDS | 35.0% |
! | CATTTTCTCTCTCTACATCC+TGG | + | chr7_2:65472603-65472622 | Msa1069690:five_prime_UTR | 40.0% |
CAAGTGAAGAAAGAGTTGTG+TGG | - | chr7_2:65472711-65472730 | None:intergenic | 40.0% | |
!! | AGAACTTTTGGTGACAACCA+TGG | + | chr7_2:65472734-65472753 | Msa1069690:exon | 40.0% |
!!! | AGTGAGCTAGTTTTGGAAGA+TGG | + | chr7_2:65472774-65472793 | Msa1069690:CDS | 40.0% |
TCTACAAGCTCATGATCAGT+TGG | - | chr7_2:65472831-65472850 | None:intergenic | 40.0% | |
TCGAATTCTGACAGGACATT+TGG | - | chr7_2:65472891-65472910 | None:intergenic | 40.0% | |
!! | GTACCTCATATGCTTTGAAG+AGG | - | chr7_2:65473150-65473169 | None:intergenic | 40.0% |
TCTTTGATATCAGGAACCGT+AGG | + | chr7_2:65473174-65473193 | Msa1069690:CDS | 40.0% | |
GAACCGTAGGTTCGAAAATA+TGG | + | chr7_2:65473187-65473206 | Msa1069690:CDS | 40.0% | |
AATATGGATGCAAGAAGAGC+TGG | + | chr7_2:65473203-65473222 | Msa1069690:CDS | 40.0% | |
GAGAATATATGAGAGGAACG+AGG | + | chr7_2:65473238-65473257 | Msa1069690:CDS | 40.0% | |
AATCAATCACTGTTGGTGTG+GGG | - | chr7_2:65473705-65473724 | None:intergenic | 40.0% | |
GAAATCAATCACTGTTGGTG+TGG | - | chr7_2:65473707-65473726 | None:intergenic | 40.0% | |
GAAACATGAGTTCATGGAGA+GGG | - | chr7_2:65473763-65473782 | None:intergenic | 40.0% | |
TGAAACATGAGTTCATGGAG+AGG | - | chr7_2:65473764-65473783 | None:intergenic | 40.0% | |
! | CATTTTCTCTCTCTACATCC+TGG | + | chr7_2:65472603-65472622 | Msa1069690:five_prime_UTR | 40.0% |
CAAGTGAAGAAAGAGTTGTG+TGG | - | chr7_2:65472711-65472730 | None:intergenic | 40.0% | |
!! | AGAACTTTTGGTGACAACCA+TGG | + | chr7_2:65472734-65472753 | Msa1069690:exon | 40.0% |
!!! | AGTGAGCTAGTTTTGGAAGA+TGG | + | chr7_2:65472774-65472793 | Msa1069690:CDS | 40.0% |
TCTACAAGCTCATGATCAGT+TGG | - | chr7_2:65472831-65472850 | None:intergenic | 40.0% | |
TCGAATTCTGACAGGACATT+TGG | - | chr7_2:65472891-65472910 | None:intergenic | 40.0% | |
!! | GTACCTCATATGCTTTGAAG+AGG | - | chr7_2:65473150-65473169 | None:intergenic | 40.0% |
TCTTTGATATCAGGAACCGT+AGG | + | chr7_2:65473174-65473193 | Msa1069690:CDS | 40.0% | |
GAACCGTAGGTTCGAAAATA+TGG | + | chr7_2:65473187-65473206 | Msa1069690:CDS | 40.0% | |
AATATGGATGCAAGAAGAGC+TGG | + | chr7_2:65473203-65473222 | Msa1069690:CDS | 40.0% | |
GAGAATATATGAGAGGAACG+AGG | + | chr7_2:65473238-65473257 | Msa1069690:CDS | 40.0% | |
AATCAATCACTGTTGGTGTG+GGG | - | chr7_2:65473705-65473724 | None:intergenic | 40.0% | |
GAAATCAATCACTGTTGGTG+TGG | - | chr7_2:65473707-65473726 | None:intergenic | 40.0% | |
GAAACATGAGTTCATGGAGA+GGG | - | chr7_2:65473763-65473782 | None:intergenic | 40.0% | |
TGAAACATGAGTTCATGGAG+AGG | - | chr7_2:65473764-65473783 | None:intergenic | 40.0% | |
! | ATGCTTTTCATCAGCAGCCA+TGG | - | chr7_2:65472754-65472773 | None:intergenic | 45.0% |
GGATCAAACCTGAATCCAAC+AGG | - | chr7_2:65472810-65472829 | None:intergenic | 45.0% | |
ACAGGACATTTGGAAGAGGT+TGG | - | chr7_2:65472881-65472900 | None:intergenic | 45.0% | |
TCTGACAGGACATTTGGAAG+AGG | - | chr7_2:65472885-65472904 | None:intergenic | 45.0% | |
! | AAACCTTTTGGCAGCTTCCA+TGG | - | chr7_2:65472930-65472949 | None:intergenic | 45.0% |
GGACCTCTTCAAAGCATATG+AGG | + | chr7_2:65473144-65473163 | Msa1069690:CDS | 45.0% | |
GATGCAAGAAGAGCTGGAAA+TGG | + | chr7_2:65473209-65473228 | Msa1069690:CDS | 45.0% | |
GAAGAGCTGGAAATGGTGAA+TGG | + | chr7_2:65473216-65473235 | Msa1069690:CDS | 45.0% | |
GTTTACTGGAGAATGCAAGG+AGG | + | chr7_2:65473308-65473327 | Msa1069690:CDS | 45.0% | |
! | GTCAAGCTCTGATGACACAA+TGG | + | chr7_2:65473333-65473352 | Msa1069690:CDS | 45.0% |
! | AAGCTCTGATGACACAATGG+AGG | + | chr7_2:65473336-65473355 | Msa1069690:CDS | 45.0% |
ATGTAGGTGTACTCAGCTGT+AGG | + | chr7_2:65473631-65473650 | Msa1069690:intron | 45.0% | |
ATCAATCACTGTTGGTGTGG+GGG | - | chr7_2:65473704-65473723 | None:intergenic | 45.0% | |
AGAGACACTTGCATCTTCCA+TGG | - | chr7_2:65473731-65473750 | None:intergenic | 45.0% | |
CAGGAATTGAGGTTTGTGCT+TGG | + | chr7_2:65473894-65473913 | Msa1069690:three_prime_UTR | 45.0% | |
! | ATGCTTTTCATCAGCAGCCA+TGG | - | chr7_2:65472754-65472773 | None:intergenic | 45.0% |
GGATCAAACCTGAATCCAAC+AGG | - | chr7_2:65472810-65472829 | None:intergenic | 45.0% | |
ACAGGACATTTGGAAGAGGT+TGG | - | chr7_2:65472881-65472900 | None:intergenic | 45.0% | |
TCTGACAGGACATTTGGAAG+AGG | - | chr7_2:65472885-65472904 | None:intergenic | 45.0% | |
! | AAACCTTTTGGCAGCTTCCA+TGG | - | chr7_2:65472930-65472949 | None:intergenic | 45.0% |
GGACCTCTTCAAAGCATATG+AGG | + | chr7_2:65473144-65473163 | Msa1069690:CDS | 45.0% | |
GATGCAAGAAGAGCTGGAAA+TGG | + | chr7_2:65473209-65473228 | Msa1069690:CDS | 45.0% | |
GAAGAGCTGGAAATGGTGAA+TGG | + | chr7_2:65473216-65473235 | Msa1069690:CDS | 45.0% | |
GTTTACTGGAGAATGCAAGG+AGG | + | chr7_2:65473308-65473327 | Msa1069690:CDS | 45.0% | |
! | GTCAAGCTCTGATGACACAA+TGG | + | chr7_2:65473333-65473352 | Msa1069690:CDS | 45.0% |
! | AAGCTCTGATGACACAATGG+AGG | + | chr7_2:65473336-65473355 | Msa1069690:CDS | 45.0% |
ATGTAGGTGTACTCAGCTGT+AGG | + | chr7_2:65473631-65473650 | Msa1069690:intron | 45.0% | |
ATCAATCACTGTTGGTGTGG+GGG | - | chr7_2:65473704-65473723 | None:intergenic | 45.0% | |
AGAGACACTTGCATCTTCCA+TGG | - | chr7_2:65473731-65473750 | None:intergenic | 45.0% | |
CAGGAATTGAGGTTTGTGCT+TGG | + | chr7_2:65473894-65473913 | Msa1069690:three_prime_UTR | 45.0% | |
GAGAGAGAAAGAGAGAGACC+AGG | - | chr7_2:65472624-65472643 | None:intergenic | 50.0% | |
ACTCAGCTGTAGGTGCCTAT+CGG | + | chr7_2:65473641-65473660 | Msa1069690:CDS | 50.0% | |
ACATGAGTTCATGGAGAGGG+AGG | - | chr7_2:65473760-65473779 | None:intergenic | 50.0% | |
GAGAGAGAAAGAGAGAGACC+AGG | - | chr7_2:65472624-65472643 | None:intergenic | 50.0% | |
ACTCAGCTGTAGGTGCCTAT+CGG | + | chr7_2:65473641-65473660 | Msa1069690:CDS | 50.0% | |
ACATGAGTTCATGGAGAGGG+AGG | - | chr7_2:65473760-65473779 | None:intergenic | 50.0% | |
GAGCCATGGAAGCTGCCAAA+AGG | + | chr7_2:65472924-65472943 | Msa1069690:CDS | 55.0% | |
AGTTCATGGAGAGGGAGGAG+GGG | - | chr7_2:65473755-65473774 | None:intergenic | 55.0% | |
GAGTTCATGGAGAGGGAGGA+GGG | - | chr7_2:65473756-65473775 | None:intergenic | 55.0% | |
TGAGTTCATGGAGAGGGAGG+AGG | - | chr7_2:65473757-65473776 | None:intergenic | 55.0% | |
GAGCCATGGAAGCTGCCAAA+AGG | + | chr7_2:65472924-65472943 | Msa1069690:CDS | 55.0% | |
AGTTCATGGAGAGGGAGGAG+GGG | - | chr7_2:65473755-65473774 | None:intergenic | 55.0% | |
GAGTTCATGGAGAGGGAGGA+GGG | - | chr7_2:65473756-65473775 | None:intergenic | 55.0% | |
TGAGTTCATGGAGAGGGAGG+AGG | - | chr7_2:65473757-65473776 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 65472580 | 65474059 | 65472580 | ID=Msa1069690;Name=Msa1069690 |
chr7_2 | mRNA | 65472580 | 65474059 | 65472580 | ID=Msa1069690-mRNA-1;Parent=Msa1069690;Name=Msa1069690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=173|1|1|1|1|1|3|288|196 |
chr7_2 | exon | 65472580 | 65472945 | 65472580 | ID=Msa1069690-mRNA-1:exon:13778;Parent=Msa1069690-mRNA-1 |
chr7_2 | exon | 65473138 | 65473400 | 65473138 | ID=Msa1069690-mRNA-1:exon:13779;Parent=Msa1069690-mRNA-1 |
chr7_2 | exon | 65473637 | 65474059 | 65473637 | ID=Msa1069690-mRNA-1:exon:13780;Parent=Msa1069690-mRNA-1 |
chr7_2 | five_prime_UTR | 65472580 | 65472752 | 65472580 | ID=Msa1069690-mRNA-1:five_prime_utr;Parent=Msa1069690-mRNA-1 |
chr7_2 | CDS | 65472753 | 65472945 | 65472753 | ID=Msa1069690-mRNA-1:cds;Parent=Msa1069690-mRNA-1 |
chr7_2 | CDS | 65473138 | 65473400 | 65473138 | ID=Msa1069690-mRNA-1:cds;Parent=Msa1069690-mRNA-1 |
chr7_2 | CDS | 65473637 | 65473771 | 65473637 | ID=Msa1069690-mRNA-1:cds;Parent=Msa1069690-mRNA-1 |
chr7_2 | three_prime_UTR | 65473772 | 65474059 | 65473772 | ID=Msa1069690-mRNA-1:three_prime_utr;Parent=Msa1069690-mRNA-1 |
Gene Sequence |
Protein sequence |