Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070240 | XP_013449475.1 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070240 | sp|O82768|HIS2_ARATH | 75.319 | 235 | 52 | 2 | 48 | 281 | 51 | 280 | 1.90e-128 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070240 | A0A072U2X9 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1031140 | Msa1070240 | 0.945768 | 1.643862e-104 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070240 | MtrunA17_Chr7g0252441 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1070240 | AT1G31860.1 | 75.319 | 235 | 52 | 2 | 48 | 281 | 51 | 280 | 1.93e-129 | 369 |
| Msa1070240 | AT1G31860.2 | 73.659 | 205 | 48 | 2 | 78 | 281 | 1 | 200 | 1.64e-108 | 313 |
| Msa1070240 | AT1G31860.3 | 76.023 | 171 | 35 | 2 | 48 | 217 | 51 | 216 | 9.39e-93 | 274 |
Find 102 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTGTTCCACCGATTTC+TGG | 0.137364 | 7_2:-66196651 | None:intergenic |
| ATTTGTCCAACTTAGATATT+TGG | 0.150858 | 7_2:+66196838 | Msa1070240:three_prime_UTR |
| CACTGTTGGACGGTGTAAAA+TGG | 0.157529 | 7_2:+66195509 | Msa1070240:CDS |
| CAAGCAACATATTTAGTTTC+TGG | 0.177202 | 7_2:+66196698 | Msa1070240:three_prime_UTR |
| ATAGTTATTATAATATTATT+TGG | 0.219017 | 7_2:-66196979 | None:intergenic |
| ATGGACATTGATGAAATTAT+TGG | 0.223699 | 7_2:-66195695 | None:intergenic |
| ATTATAATAACTATTTATTA+TGG | 0.245921 | 7_2:+66196988 | Msa1070240:three_prime_UTR |
| ATGAAGGGAAGATGTGAAAT+TGG | 0.271843 | 7_2:-66192706 | None:intergenic |
| GTTGGTCCTGTAACCGCATC+TGG | 0.276016 | 7_2:-66194166 | None:intergenic |
| AAAACGAGAGATTGCACTTC+TGG | 0.284409 | 7_2:-66194128 | None:intergenic |
| TTCATCGCTGCTATTCATTC+AGG | 0.317541 | 7_2:+66192724 | Msa1070240:five_prime_UTR |
| ATTATTGGAGGTCTCTCCTT+TGG | 0.330042 | 7_2:-66195680 | None:intergenic |
| GCTATCCCAGATGCGGTTAC+AGG | 0.343137 | 7_2:+66194160 | Msa1070240:CDS |
| ACGAGTTGTTACCATGAATA+GGG | 0.355971 | 7_2:+66196742 | Msa1070240:three_prime_UTR |
| AAATTCTTGTGATGATAGTA+TGG | 0.359955 | 7_2:-66196923 | None:intergenic |
| TGAAGGGAAGATGTGAAATT+GGG | 0.365325 | 7_2:-66192705 | None:intergenic |
| GTGTGGCAGGTAGGCCCATC+AGG | 0.375048 | 7_2:-66195884 | None:intergenic |
| CTACTACCTCTGCCTTGCGC+TGG | 0.376948 | 7_2:-66196112 | None:intergenic |
| AAGTGAAGATGGAGAAAGAC+AGG | 0.378838 | 7_2:-66192650 | None:intergenic |
| ACAGGTTGAAGGAAACAAAT+TGG | 0.394156 | 7_2:+66196052 | Msa1070240:intron |
| AAGAAAACGGAAAGCCTTCA+TGG | 0.412346 | 7_2:+66196135 | Msa1070240:CDS |
| TCATTGTTCCACCGATTTCT+GGG | 0.414624 | 7_2:-66196650 | None:intergenic |
| GATGTGAAATTGGGGTTGTA+AGG | 0.419545 | 7_2:-66192696 | None:intergenic |
| GCTAGAGTTACCCCTATTCA+TGG | 0.425615 | 7_2:-66196753 | None:intergenic |
| GTTGGGTTAGAAAGTGAAGA+TGG | 0.429235 | 7_2:-66192661 | None:intergenic |
| TGTGGCCTTCCGAGAAGATA+TGG | 0.431591 | 7_2:-66195626 | None:intergenic |
| AACAACTCGTCTTGTACATC+TGG | 0.433413 | 7_2:-66196729 | None:intergenic |
| TAAGAGGCGTTTCAATTCAA+TGG | 0.438518 | 7_2:+66194065 | Msa1070240:exon |
| TAAGGAAGAAGAGTTGAGTT+GGG | 0.445699 | 7_2:-66192678 | None:intergenic |
| AGTTGCTGTGCTCTAAAATC+AGG | 0.447400 | 7_2:+66196183 | Msa1070240:CDS |
| GACGAGTTGTTACCATGAAT+AGG | 0.450522 | 7_2:+66196741 | Msa1070240:three_prime_UTR |
| TACTACCTCTGCCTTGCGCT+GGG | 0.453376 | 7_2:-66196111 | None:intergenic |
| TGTTTCTGCCCCTGTGTGGC+AGG | 0.457775 | 7_2:-66195897 | None:intergenic |
| TGGTATCTGCTACAGGTTGA+AGG | 0.459991 | 7_2:+66196041 | Msa1070240:intron |
| CATGGTTCTGTTGGCACTAA+AGG | 0.463951 | 7_2:+66196546 | Msa1070240:CDS |
| TGGCTACAACCATATCTTCT+CGG | 0.473692 | 7_2:+66195617 | Msa1070240:CDS |
| CGAGTTCCAAATATCTAAGT+TGG | 0.475665 | 7_2:-66196844 | None:intergenic |
| TGAATGAATAGCAGCGATGA+AGG | 0.476212 | 7_2:-66192722 | None:intergenic |
| AAGTCGCACAACCCAGAAAT+CGG | 0.479737 | 7_2:+66196639 | Msa1070240:CDS |
| TCTGCCCCTGTGTGGCAGGT+AGG | 0.494555 | 7_2:-66195893 | None:intergenic |
| TCTTTCAACAAGTCAAAGAC+TGG | 0.497321 | 7_2:-66195932 | None:intergenic |
| GTAAGGAAGAAGAGTTGAGT+TGG | 0.497769 | 7_2:-66192679 | None:intergenic |
| CAACTTAGATAATATACCTT+GGG | 0.500220 | 7_2:+66195858 | Msa1070240:intron |
| CTATCATGCCATGGTTCTGT+TGG | 0.502158 | 7_2:+66196537 | Msa1070240:CDS |
| GGTGTAAAATGGGATGATAA+AGG | 0.507922 | 7_2:+66195520 | Msa1070240:CDS |
| ACTGTTGGACGGTGTAAAAT+GGG | 0.513858 | 7_2:+66195510 | Msa1070240:CDS |
| GACATTGATGAAATTATTGG+AGG | 0.523136 | 7_2:-66195692 | None:intergenic |
| GTCGGTCACGGTCATCGTTG+TGG | 0.523921 | 7_2:+66195656 | Msa1070240:CDS |
| TGACTTGTTGAAAGAAGAAG+AGG | 0.531116 | 7_2:+66195940 | Msa1070240:CDS |
| TCTTTCTACTTGCAGAGAAG+AGG | 0.537580 | 7_2:+66196441 | Msa1070240:intron |
| ATTGCACTTCTGGAAACCTC+TGG | 0.541828 | 7_2:-66194118 | None:intergenic |
| AAAATGGGATGATAAAGGTT+TGG | 0.543571 | 7_2:+66195525 | Msa1070240:CDS |
| AATAACCGCTTTGTCCATGA+AGG | 0.545592 | 7_2:-66196149 | None:intergenic |
| GATGGGCCTACCTGCCACAC+AGG | 0.546338 | 7_2:+66195887 | Msa1070240:CDS |
| GCAGAGGTAGTAGAAGAAAA+CGG | 0.548101 | 7_2:+66196122 | Msa1070240:CDS |
| ACAACTTAGATAATATACCT+TGG | 0.549394 | 7_2:+66195857 | Msa1070240:intron |
| ATGGGCCTACCTGCCACACA+GGG | 0.551373 | 7_2:+66195888 | Msa1070240:CDS |
| CGGTCATCGTTGTGGACCAA+AGG | 0.552026 | 7_2:+66195664 | Msa1070240:CDS |
| CACAATCAAGAAAGACATCA+TGG | 0.552848 | 7_2:-66195714 | None:intergenic |
| ATATACCTTGGGAAACCTGA+TGG | 0.557467 | 7_2:+66195869 | Msa1070240:CDS |
| GCATCTGGGATAGCCATGGC+TGG | 0.559498 | 7_2:-66194151 | None:intergenic |
| GTCACGCACTGCTTCAGAGA+TGG | 0.565116 | 7_2:+66196504 | Msa1070240:CDS |
| TTTACAGTTGCAAAGTCAAG+TGG | 0.565123 | 7_2:+66194039 | Msa1070240:intron |
| AATATCCCAGCGCAAGGCAG+AGG | 0.568929 | 7_2:+66196106 | Msa1070240:CDS |
| AGAAGATATGGTTGTAGCCA+CGG | 0.570030 | 7_2:-66195614 | None:intergenic |
| CGGTTACAGGACCAACCACT+TGG | 0.571408 | 7_2:+66194173 | Msa1070240:CDS |
| TTGGTCCTGTAACCGCATCT+GGG | 0.575216 | 7_2:-66194165 | None:intergenic |
| TGATGTACTCTATCATGCCA+TGG | 0.578899 | 7_2:+66196528 | Msa1070240:CDS |
| TAAATTGACCACATTACAAG+AGG | 0.582351 | 7_2:-66196870 | None:intergenic |
| CAAAGTCAAGTGGCTCTAAG+AGG | 0.585169 | 7_2:+66194049 | Msa1070240:five_prime_UTR |
| CACATGCTTCAATCCGCCAG+AGG | 0.586849 | 7_2:+66194102 | Msa1070240:CDS |
| TATACCTTGGGAAACCTGAT+GGG | 0.588739 | 7_2:+66195870 | Msa1070240:CDS |
| GAATGAATAGCAGCGATGAA+GGG | 0.599402 | 7_2:-66192721 | None:intergenic |
| GTCAACAATATCCCAGCGCA+AGG | 0.606963 | 7_2:+66196100 | Msa1070240:CDS |
| GGAAGGCCACATTCTATAGT+CGG | 0.610737 | 7_2:+66195638 | Msa1070240:CDS |
| CAGGTAGACTCACTGTTGGA+CGG | 0.614205 | 7_2:+66195499 | Msa1070240:intron |
| TACAACCATATCTTCTCGGA+AGG | 0.619181 | 7_2:+66195621 | Msa1070240:CDS |
| CGAGTTGTTACCATGAATAG+GGG | 0.620499 | 7_2:+66196743 | Msa1070240:three_prime_UTR |
| AACCGCATCTGGGATAGCCA+TGG | 0.622178 | 7_2:-66194155 | None:intergenic |
| GCACTTCTGGAAACCTCTGG+CGG | 0.626654 | 7_2:-66194115 | None:intergenic |
| AGAAGCAAAAGCCAAGTGGT+TGG | 0.627767 | 7_2:-66194184 | None:intergenic |
| TATGCACACATCTGACCCCA+AGG | 0.631404 | 7_2:+66194206 | Msa1070240:CDS |
| CTTTGCAAATAGAGAAGCCG+TGG | 0.632765 | 7_2:+66195597 | Msa1070240:CDS |
| ACTCGTATCCTCTTGTAATG+TGG | 0.638626 | 7_2:+66196862 | Msa1070240:three_prime_UTR |
| CCACATTCTATAGTCGGTCA+CGG | 0.639280 | 7_2:+66195644 | Msa1070240:CDS |
| TAGGCCCATCAGGTTTCCCA+AGG | 0.643905 | 7_2:-66195874 | None:intergenic |
| TGAAACACTAGAGAATAATG+AGG | 0.646491 | 7_2:+66196477 | Msa1070240:CDS |
| ATAGCTCAGAATGTTGACAC+AGG | 0.647706 | 7_2:+66195556 | Msa1070240:CDS |
| AGCCATGGCTATCCCAGATG+CGG | 0.651262 | 7_2:+66194153 | Msa1070240:CDS |
| TTGTCAGGTAGACTCACTGT+TGG | 0.652198 | 7_2:+66195495 | Msa1070240:intron |
| TAGCTCAGAATGTTGACACA+GGG | 0.653091 | 7_2:+66195557 | Msa1070240:CDS |
| CTTTAGTGCCAACAGAACCA+TGG | 0.657861 | 7_2:-66196545 | None:intergenic |
| GAAGGGAAGATGTGAAATTG+GGG | 0.659208 | 7_2:-66192704 | None:intergenic |
| ACAGGGGCAATACTGATGCA+AGG | 0.659548 | 7_2:+66195574 | Msa1070240:CDS |
| AGCATGTTTCTGCCCCTGTG+TGG | 0.667419 | 7_2:-66195901 | None:intergenic |
| GGATGATAAAGGTTTGGCTG+TGG | 0.671785 | 7_2:+66195531 | Msa1070240:CDS |
| TCGCACAACCCAGAAATCGG+TGG | 0.673876 | 7_2:+66196642 | Msa1070240:CDS |
| CCGTGACCGACTATAGAATG+TGG | 0.681377 | 7_2:-66195644 | None:intergenic |
| GCATAGAAGCAAAAGCCAAG+TGG | 0.692528 | 7_2:-66194188 | None:intergenic |
| GGATTGAAGCATGTGAACGT+TGG | 0.704472 | 7_2:-66194094 | None:intergenic |
| GAAAGCCTTCATGGACAAAG+CGG | 0.708284 | 7_2:+66196144 | Msa1070240:CDS |
| AGCTCAGAATGTTGACACAG+GGG | 0.720988 | 7_2:+66195558 | Msa1070240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCAAAAAACATTTTAAAT+GGG | - | chr7_2:66193872-66193891 | None:intergenic | 10.0% |
| !!! | TTATCAAAAAACATTTTAAA+TGG | - | chr7_2:66193873-66193892 | None:intergenic | 10.0% |
| !! | GTTTAAAAAATAAATAAATG+AGG | + | chr7_2:66194638-66194657 | Msa1070240:intron | 10.0% |
| !! | AAAATAAAATTAATGTTTCA+TGG | - | chr7_2:66196342-66196361 | None:intergenic | 10.0% |
| !! | GAATAATTTCATCAAATATA+TGG | - | chr7_2:66192855-66192874 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTAAGTCTGAAT+TGG | + | chr7_2:66192896-66192915 | Msa1070240:intron | 15.0% |
| !! | AATAAGAAGATATAAACAAT+GGG | + | chr7_2:66193458-66193477 | Msa1070240:intron | 15.0% |
| !! | TAAAAATGTAAAAGAATTTG+AGG | - | chr7_2:66195307-66195326 | None:intergenic | 15.0% |
| !! | TATTATTAACAGCATATTTA+CGG | - | chr7_2:66195336-66195355 | None:intergenic | 15.0% |
| !! | TAAAAAATGAACATTTGACA+TGG | + | chr7_2:66193053-66193072 | Msa1070240:intron | 20.0% |
| !! | TTATAACAATGTTGTAATTG+CGG | + | chr7_2:66193085-66193104 | Msa1070240:intron | 20.0% |
| !!! | TAACAACATTGGTTTATATA+AGG | + | chr7_2:66193240-66193259 | Msa1070240:intron | 20.0% |
| !!! | TTTATATAAGGCATTCTTAT+TGG | + | chr7_2:66193252-66193271 | Msa1070240:intron | 20.0% |
| !!! | ATAACATAAGCAATTTTTGT+CGG | + | chr7_2:66193381-66193400 | Msa1070240:intron | 20.0% |
| !! | GAATAAGAAGATATAAACAA+TGG | + | chr7_2:66193457-66193476 | Msa1070240:intron | 20.0% |
| !!! | AAATGTTTTTTGATAACGTA+AGG | + | chr7_2:66193877-66193896 | Msa1070240:intron | 20.0% |
| !!! | ACTAGTTTCTTTCTTATATT+TGG | + | chr7_2:66194250-66194269 | Msa1070240:intron | 20.0% |
| !! | AATCAAACTAAACAAAACAA+AGG | + | chr7_2:66194473-66194492 | Msa1070240:intron | 20.0% |
| !! | ATCAAACTAAACAAAACAAA+GGG | + | chr7_2:66194474-66194493 | Msa1070240:intron | 20.0% |
| !! | AATTGGACAATAAAAAAAGA+TGG | - | chr7_2:66194501-66194520 | None:intergenic | 20.0% |
| !! | AATAACAATATTTCTCAGAT+AGG | - | chr7_2:66194734-66194753 | None:intergenic | 20.0% |
| !!! | TGTTATTTTATAGATAGACA+AGG | + | chr7_2:66194747-66194766 | Msa1070240:intron | 20.0% |
| !! | GTTATTATCACAATTTCAAT+AGG | - | chr7_2:66195217-66195236 | None:intergenic | 20.0% |
| !! | TTTGTATTTCTTAGTTCAAA+TGG | + | chr7_2:66195252-66195271 | Msa1070240:intron | 20.0% |
| !! | TTGTATTTCTTAGTTCAAAT+GGG | + | chr7_2:66195253-66195272 | Msa1070240:intron | 20.0% |
| !! | TATTATCTAAGTTGTTATCA+AGG | - | chr7_2:66195852-66195871 | None:intergenic | 20.0% |
| !! | AAAGTTTATGCATTTTGTTG+AGG | + | chr7_2:66193013-66193032 | Msa1070240:intron | 25.0% |
| ! | GATATAGAGCTATAAAATTC+CGG | - | chr7_2:66193211-66193230 | None:intergenic | 25.0% |
| ! | AAACCAATGTTGTTAAATAG+TGG | - | chr7_2:66193235-66193254 | None:intergenic | 25.0% |
| ! | GACAAAAATTGCTTATGTTA+TGG | - | chr7_2:66193382-66193401 | None:intergenic | 25.0% |
| ! | ATATGGTAAAAAAGTTCACA+GGG | - | chr7_2:66193946-66193965 | None:intergenic | 25.0% |
| !!! | TGTGAACTTTTTTACCATAT+GGG | + | chr7_2:66193946-66193965 | Msa1070240:intron | 25.0% |
| ! | CTTTCTTATATTTGGACAAT+TGG | + | chr7_2:66194258-66194277 | Msa1070240:intron | 25.0% |
| ! | AACATATCAACTGAAAATGA+AGG | - | chr7_2:66194365-66194384 | None:intergenic | 25.0% |
| !! | TTAAATGACAGTTTTCTTGT+TGG | + | chr7_2:66194559-66194578 | Msa1070240:intron | 25.0% |
| ! | AAATAAATAAATGAGGAACC+TGG | + | chr7_2:66194645-66194664 | Msa1070240:intron | 25.0% |
| ! | TACAATTATATTCATGAACC+AGG | - | chr7_2:66194666-66194685 | None:intergenic | 25.0% |
| ! | CAGTCAAATTGACAATAAAA+TGG | - | chr7_2:66194905-66194924 | None:intergenic | 25.0% |
| !!! | CTCTTGCTTTGAAAAATTAT+TGG | + | chr7_2:66194957-66194976 | Msa1070240:intron | 25.0% |
| ! | AAGTCATGCTTATTTGTAAA+TGG | + | chr7_2:66195001-66195020 | Msa1070240:intron | 25.0% |
| ! | TTATCAGTATCATGATGAAT+GGG | - | chr7_2:66195065-66195084 | None:intergenic | 25.0% |
| ! | ATTATCAGTATCATGATGAA+TGG | - | chr7_2:66195066-66195085 | None:intergenic | 25.0% |
| ! | TTGAACTAAGAAATACAAAC+TGG | - | chr7_2:66195251-66195270 | None:intergenic | 25.0% |
| ! | TGTATTTCTTAGTTCAAATG+GGG | + | chr7_2:66195254-66195273 | Msa1070240:intron | 25.0% |
| ! | TTAATGTGAAACAGAAAACA+AGG | - | chr7_2:66195463-66195482 | None:intergenic | 25.0% |
| !! | TAAAAAGCTAAACTTTTGTC+AGG | + | chr7_2:66195480-66195499 | Msa1070240:intron | 25.0% |
| ! | ATGGACATTGATGAAATTAT+TGG | - | chr7_2:66195698-66195717 | None:intergenic | 25.0% |
| ! | AAAAAGTCAATGCAGAAAAA+CGG | - | chr7_2:66195764-66195783 | None:intergenic | 25.0% |
| !! | TTGTTATTCTTTGTATCATG+TGG | + | chr7_2:66195803-66195822 | Msa1070240:intron | 25.0% |
| ! | ACAACTTAGATAATATACCT+TGG | + | chr7_2:66195857-66195876 | Msa1070240:intron | 25.0% |
| ! | CAACTTAGATAATATACCTT+GGG | + | chr7_2:66195858-66195877 | Msa1070240:intron | 25.0% |
| ! | TAGCTTCAATCAATTAAAAC+AGG | + | chr7_2:66195964-66195983 | Msa1070240:intron | 25.0% |
| !! | CATGAAGAATATGATTTTTG+GGG | - | chr7_2:66196260-66196279 | None:intergenic | 25.0% |
| !! | CCATGAAGAATATGATTTTT+GGG | - | chr7_2:66196261-66196280 | None:intergenic | 25.0% |
| !! | ACCATGAAGAATATGATTTT+TGG | - | chr7_2:66196262-66196281 | None:intergenic | 25.0% |
| !!! | GGAAATGCTTTTTTAAACAA+AGG | - | chr7_2:66196321-66196340 | None:intergenic | 25.0% |
| ! | ATTTGTCCAACTTAGATATT+TGG | + | chr7_2:66196838-66196857 | Msa1070240:three_prime_UTR | 25.0% |
| ! | AAATTCTTGTGATGATAGTA+TGG | - | chr7_2:66196926-66196945 | None:intergenic | 25.0% |
| ! | CTTATTCAACAAAAATCACA+TGG | - | chr7_2:66196957-66196976 | None:intergenic | 25.0% |
| AACGCGAATTTGAAAACAAA+AGG | - | chr7_2:66192808-66192827 | None:intergenic | 30.0% | |
| AAATGCTAATGTCATTAAGC+TGG | + | chr7_2:66192926-66192945 | Msa1070240:intron | 30.0% | |
| AACTCTTTCAGTAATGTAGA+GGG | - | chr7_2:66193304-66193323 | None:intergenic | 30.0% | |
| TTAGTTATGGTTAGAGAGAT+AGG | + | chr7_2:66193435-66193454 | Msa1070240:intron | 30.0% | |
| TAATTGATTGAGAGAGAGAT+AGG | + | chr7_2:66193684-66193703 | Msa1070240:intron | 30.0% | |
| ACAATCTCATGATTTGATGT+TGG | + | chr7_2:66193762-66193781 | Msa1070240:intron | 30.0% | |
| CATATGGTAAAAAAGTTCAC+AGG | - | chr7_2:66193947-66193966 | None:intergenic | 30.0% | |
| !!! | CTGTGAACTTTTTTACCATA+TGG | + | chr7_2:66193945-66193964 | Msa1070240:intron | 30.0% |
| AACTAGTTAGATAGTTGACA+TGG | - | chr7_2:66194237-66194256 | None:intergenic | 30.0% | |
| TTAGCATGTTATTCAGACAA+CGG | + | chr7_2:66194291-66194310 | Msa1070240:intron | 30.0% | |
| AAACCGTACTATATATGTCA+AGG | - | chr7_2:66194600-66194619 | None:intergenic | 30.0% | |
| ! | CTATTTCTTCCAGATGTATT+AGG | + | chr7_2:66194819-66194838 | Msa1070240:intron | 30.0% |
| TCCTATTGTAAGTTATGTAG+TGG | + | chr7_2:66194851-66194870 | Msa1070240:intron | 30.0% | |
| ! | ATTTGACTGTGTAGAAGTAT+CGG | + | chr7_2:66194916-66194935 | Msa1070240:intron | 30.0% |
| TATCAGTATCATGATGAATG+GGG | - | chr7_2:66195064-66195083 | None:intergenic | 30.0% | |
| ! | TCATCATGATACTGATAATG+TGG | + | chr7_2:66195067-66195086 | Msa1070240:intron | 30.0% |
| AAAATGGGATGATAAAGGTT+TGG | + | chr7_2:66195525-66195544 | Msa1070240:CDS | 30.0% | |
| GACATTGATGAAATTATTGG+AGG | - | chr7_2:66195695-66195714 | None:intergenic | 30.0% | |
| CAAACCAATTTAAATGTTGC+TGG | - | chr7_2:66196023-66196042 | None:intergenic | 30.0% | |
| CAGCAACATTTAAATTGGTT+TGG | + | chr7_2:66196021-66196040 | Msa1070240:intron | 30.0% | |
| CCCAAAAATCATATTCTTCA+TGG | + | chr7_2:66196258-66196277 | Msa1070240:intron | 30.0% | |
| AGATGATTGAAGAAAACAGA+TGG | + | chr7_2:66196370-66196389 | Msa1070240:intron | 30.0% | |
| TGAAACACTAGAGAATAATG+AGG | + | chr7_2:66196477-66196496 | Msa1070240:CDS | 30.0% | |
| ! | CAAGCAACATATTTAGTTTC+TGG | + | chr7_2:66196698-66196717 | Msa1070240:three_prime_UTR | 30.0% |
| ATGACAGAGAATAAAAACTC+GGG | - | chr7_2:66196808-66196827 | None:intergenic | 30.0% | |
| CATGACAGAGAATAAAAACT+CGG | - | chr7_2:66196809-66196828 | None:intergenic | 30.0% | |
| TAAATTGACCACATTACAAG+AGG | - | chr7_2:66196873-66196892 | None:intergenic | 30.0% | |
| TAAGGAAGAAGAGTTGAGTT+GGG | - | chr7_2:66192681-66192700 | None:intergenic | 35.0% | |
| TGAAGGGAAGATGTGAAATT+GGG | - | chr7_2:66192708-66192727 | None:intergenic | 35.0% | |
| ATGAAGGGAAGATGTGAAAT+TGG | - | chr7_2:66192709-66192728 | None:intergenic | 35.0% | |
| TCATTAAGCTGGATTCTTCT+TGG | + | chr7_2:66192937-66192956 | Msa1070240:intron | 35.0% | |
| ATCGCAGAAAATAGCAGTTT+AGG | + | chr7_2:66193108-66193127 | Msa1070240:intron | 35.0% | |
| ! | ATATTGTGAAGTACCAGCTA+TGG | - | chr7_2:66193167-66193186 | None:intergenic | 35.0% |
| TGTACTAAATAGCGTATCAC+CGG | + | chr7_2:66193189-66193208 | Msa1070240:intron | 35.0% | |
| TCGCCACTATTTAACAACAT+TGG | + | chr7_2:66193229-66193248 | Msa1070240:intron | 35.0% | |
| ACTCTTTCAGTAATGTAGAG+GGG | - | chr7_2:66193303-66193322 | None:intergenic | 35.0% | |
| CAACTCTTTCAGTAATGTAG+AGG | - | chr7_2:66193305-66193324 | None:intergenic | 35.0% | |
| ACCAAAGCTCTTTGATCTAA+GGG | - | chr7_2:66193536-66193555 | None:intergenic | 35.0% | |
| !!! | ACTTGGGTGACATAGTTTTT+TGG | + | chr7_2:66193588-66193607 | Msa1070240:intron | 35.0% |
| AGTTTGATTGAACCATAGAG+TGG | + | chr7_2:66193836-66193855 | Msa1070240:intron | 35.0% | |
| GTTTGATTGAACCATAGAGT+GGG | + | chr7_2:66193837-66193856 | Msa1070240:intron | 35.0% | |
| !!! | TTTTGATAACGTAAGGCCTA+TGG | + | chr7_2:66193884-66193903 | Msa1070240:intron | 35.0% |
| !! | TTTGATAACGTAAGGCCTAT+GGG | + | chr7_2:66193885-66193904 | Msa1070240:intron | 35.0% |
| TCAATAAACGGTGTGCATTA+AGG | - | chr7_2:66193915-66193934 | None:intergenic | 35.0% | |
| AGGGACAAAAGGTCAATAAA+CGG | - | chr7_2:66193927-66193946 | None:intergenic | 35.0% | |
| AAAAAGTTCACAGGGACAAA+AGG | - | chr7_2:66193938-66193957 | None:intergenic | 35.0% | |
| TTTACAGTTGCAAAGTCAAG+TGG | + | chr7_2:66194039-66194058 | Msa1070240:intron | 35.0% | |
| !! | TAAGAGGCGTTTCAATTCAA+TGG | + | chr7_2:66194065-66194084 | Msa1070240:exon | 35.0% |
| AGTTGACATGGAAATACCTT+GGG | - | chr7_2:66194225-66194244 | None:intergenic | 35.0% | |
| TAGTTGACATGGAAATACCT+TGG | - | chr7_2:66194226-66194245 | None:intergenic | 35.0% | |
| AGAGCCCTTGAGAAAATAAA+GGG | + | chr7_2:66194320-66194339 | Msa1070240:intron | 35.0% | |
| !!! | ACGTCCCTTTATTTTCTCAA+GGG | - | chr7_2:66194327-66194346 | None:intergenic | 35.0% |
| TAAGGAGTTGTCACTGTAAT+TGG | - | chr7_2:66194518-66194537 | None:intergenic | 35.0% | |
| ATTACAGTGACAACTCCTTA+CGG | + | chr7_2:66194518-66194537 | Msa1070240:intron | 35.0% | |
| CGTCCTTGACATATATAGTA+CGG | + | chr7_2:66194594-66194613 | Msa1070240:intron | 35.0% | |
| AATCCTAGACCTAATACATC+TGG | - | chr7_2:66194831-66194850 | None:intergenic | 35.0% | |
| GCCACTACATAACTTACAAT+AGG | - | chr7_2:66194855-66194874 | None:intergenic | 35.0% | |
| !! | TTTGACTGTGTAGAAGTATC+GGG | + | chr7_2:66194917-66194936 | Msa1070240:intron | 35.0% |
| TAACAACTAAAACAGCACCA+AGG | - | chr7_2:66195189-66195208 | None:intergenic | 35.0% | |
| CTTGATGCCACAAAACTAAA+TGG | - | chr7_2:66195283-66195302 | None:intergenic | 35.0% | |
| TGATTGCTTATGAAATGCCA+TGG | + | chr7_2:66195385-66195404 | Msa1070240:intron | 35.0% | |
| GAATGTAACAACAAATGCCA+TGG | - | chr7_2:66195405-66195424 | None:intergenic | 35.0% | |
| ! | GTTACATTCCTTCTCTCTTT+TGG | + | chr7_2:66195416-66195435 | Msa1070240:intron | 35.0% |
| AAAAGACACCAAAAGAGAGA+AGG | - | chr7_2:66195427-66195446 | None:intergenic | 35.0% | |
| GGTGTAAAATGGGATGATAA+AGG | + | chr7_2:66195520-66195539 | Msa1070240:CDS | 35.0% | |
| CACAATCAAGAAAGACATCA+TGG | - | chr7_2:66195717-66195736 | None:intergenic | 35.0% | |
| ! | CAAGAGCTTTTACAGAATCA+CGG | - | chr7_2:66195741-66195760 | None:intergenic | 35.0% |
| TCTTTCAACAAGTCAAAGAC+TGG | - | chr7_2:66195935-66195954 | None:intergenic | 35.0% | |
| !! | TGACTTGTTGAAAGAAGAAG+AGG | + | chr7_2:66195940-66195959 | Msa1070240:CDS | 35.0% |
| AAGGCCAGCAACATTTAAAT+TGG | + | chr7_2:66196016-66196035 | Msa1070240:intron | 35.0% | |
| ! | ACAGGTTGAAGGAAACAAAT+TGG | + | chr7_2:66196052-66196071 | Msa1070240:intron | 35.0% |
| !!! | GATTTTTGGGGTGGAAAAAA+GGG | - | chr7_2:66196248-66196267 | None:intergenic | 35.0% |
| !!! | TGATTTTTGGGGTGGAAAAA+AGG | - | chr7_2:66196249-66196268 | None:intergenic | 35.0% |
| !! | GAAGAATATGATTTTTGGGG+TGG | - | chr7_2:66196257-66196276 | None:intergenic | 35.0% |
| AAGGCAACTTTATAGCAACA+AGG | - | chr7_2:66196302-66196321 | None:intergenic | 35.0% | |
| ! | CAAAGTAGAAGAAGTTTTGC+AGG | + | chr7_2:66196573-66196592 | Msa1070240:CDS | 35.0% |
| ! | ATTTTCCAAGTCTGGTATTG+AGG | + | chr7_2:66196609-66196628 | Msa1070240:CDS | 35.0% |
| ACGAGTTGTTACCATGAATA+GGG | + | chr7_2:66196742-66196761 | Msa1070240:three_prime_UTR | 35.0% | |
| TGACAGAGAATAAAAACTCG+GGG | - | chr7_2:66196807-66196826 | None:intergenic | 35.0% | |
| CGAGTTCCAAATATCTAAGT+TGG | - | chr7_2:66196847-66196866 | None:intergenic | 35.0% | |
| AAGTGAAGATGGAGAAAGAC+AGG | - | chr7_2:66192653-66192672 | None:intergenic | 40.0% | |
| ! | GTTGGGTTAGAAAGTGAAGA+TGG | - | chr7_2:66192664-66192683 | None:intergenic | 40.0% |
| GTAAGGAAGAAGAGTTGAGT+TGG | - | chr7_2:66192682-66192701 | None:intergenic | 40.0% | |
| GATGTGAAATTGGGGTTGTA+AGG | - | chr7_2:66192699-66192718 | None:intergenic | 40.0% | |
| GAAGGGAAGATGTGAAATTG+GGG | - | chr7_2:66192707-66192726 | None:intergenic | 40.0% | |
| GAATGAATAGCAGCGATGAA+GGG | - | chr7_2:66192724-66192743 | None:intergenic | 40.0% | |
| TGAATGAATAGCAGCGATGA+AGG | - | chr7_2:66192725-66192744 | None:intergenic | 40.0% | |
| TTCATCGCTGCTATTCATTC+AGG | + | chr7_2:66192724-66192743 | Msa1070240:five_prime_UTR | 40.0% | |
| TGTTGAGGACAACTATTGTC+AGG | + | chr7_2:66193028-66193047 | Msa1070240:intron | 40.0% | |
| CTCTTTCAGTAATGTAGAGG+GGG | - | chr7_2:66193302-66193321 | None:intergenic | 40.0% | |
| TTTGTCGGCATCATACTGTT+TGG | + | chr7_2:66193396-66193415 | Msa1070240:intron | 40.0% | |
| CCATAACTAACTAACGCTGT+GGG | - | chr7_2:66193425-66193444 | None:intergenic | 40.0% | |
| ACCATAACTAACTAACGCTG+TGG | - | chr7_2:66193426-66193445 | None:intergenic | 40.0% | |
| TCCCTTAGATCAAAGAGCTT+TGG | + | chr7_2:66193532-66193551 | Msa1070240:intron | 40.0% | |
| GACCAAAGCTCTTTGATCTA+AGG | - | chr7_2:66193537-66193556 | None:intergenic | 40.0% | |
| ! | TGTAGATAGCCGATTTCACT+TGG | + | chr7_2:66193571-66193590 | Msa1070240:intron | 40.0% |
| ! | GTAGATAGCCGATTTCACTT+GGG | + | chr7_2:66193572-66193591 | Msa1070240:intron | 40.0% |
| CTATGTCACCCAAGTGAAAT+CGG | - | chr7_2:66193583-66193602 | None:intergenic | 40.0% | |
| ! | CACTTAGGTGACATAGCTTT+TGG | - | chr7_2:66193720-66193739 | None:intergenic | 40.0% |
| ! | ATATGGGCTACTGTCAAGAA+GGG | + | chr7_2:66193962-66193981 | Msa1070240:intron | 40.0% |
| AAAACGAGAGATTGCACTTC+TGG | - | chr7_2:66194131-66194150 | None:intergenic | 40.0% | |
| GTTGACATGGAAATACCTTG+GGG | - | chr7_2:66194224-66194243 | None:intergenic | 40.0% | |
| ! | ATTTTCTCAAGGGCTCTCAT+TGG | - | chr7_2:66194317-66194336 | None:intergenic | 40.0% |
| GAGAGCCCTTGAGAAAATAA+AGG | + | chr7_2:66194319-66194338 | Msa1070240:intron | 40.0% | |
| !!! | CACGTCCCTTTATTTTCTCA+AGG | - | chr7_2:66194328-66194347 | None:intergenic | 40.0% |
| TGAGAAAATAAAGGGACGTG+TGG | + | chr7_2:66194328-66194347 | Msa1070240:intron | 40.0% | |
| AACTCCTTACGGTGACATTT+GGG | + | chr7_2:66194529-66194548 | Msa1070240:intron | 40.0% | |
| AGATAGGAACGTCTATAAGC+AGG | - | chr7_2:66194718-66194737 | None:intergenic | 40.0% | |
| ACACCAAAGCATGCTAACAT+AGG | + | chr7_2:66194778-66194797 | Msa1070240:intron | 40.0% | |
| CACCAAAGCATGCTAACATA+GGG | + | chr7_2:66194779-66194798 | Msa1070240:intron | 40.0% | |
| ACCAAAGCATGCTAACATAG+GGG | + | chr7_2:66194780-66194799 | Msa1070240:intron | 40.0% | |
| CTTCCAGATGTATTAGGTCT+AGG | + | chr7_2:66194825-66194844 | Msa1070240:intron | 40.0% | |
| AAGGCTCAGAAGATACTAGA+AGG | - | chr7_2:66195170-66195189 | None:intergenic | 40.0% | |
| TTCTAGTATCTTCTGAGCCT+TGG | + | chr7_2:66195169-66195188 | Msa1070240:intron | 40.0% | |
| ATACAAACTGGACTTGCATG+AGG | - | chr7_2:66195239-66195258 | None:intergenic | 40.0% | |
| ACTGTTGGACGGTGTAAAAT+GGG | + | chr7_2:66195510-66195529 | Msa1070240:CDS | 40.0% | |
| ATAGCTCAGAATGTTGACAC+AGG | + | chr7_2:66195556-66195575 | Msa1070240:CDS | 40.0% | |
| TAGCTCAGAATGTTGACACA+GGG | + | chr7_2:66195557-66195576 | Msa1070240:CDS | 40.0% | |
| AGAAGATATGGTTGTAGCCA+CGG | - | chr7_2:66195617-66195636 | None:intergenic | 40.0% | |
| TGGCTACAACCATATCTTCT+CGG | + | chr7_2:66195617-66195636 | Msa1070240:CDS | 40.0% | |
| TACAACCATATCTTCTCGGA+AGG | + | chr7_2:66195621-66195640 | Msa1070240:CDS | 40.0% | |
| ATTATTGGAGGTCTCTCCTT+TGG | - | chr7_2:66195683-66195702 | None:intergenic | 40.0% | |
| ATATACCTTGGGAAACCTGA+TGG | + | chr7_2:66195869-66195888 | Msa1070240:CDS | 40.0% | |
| TATACCTTGGGAAACCTGAT+GGG | + | chr7_2:66195870-66195889 | Msa1070240:CDS | 40.0% | |
| ! | TCCTGTTTTCCTGTAGAGAA+AGG | + | chr7_2:66195997-66196016 | Msa1070240:intron | 40.0% |
| !! | ATTGGTTTGGTATCTGCTAC+AGG | + | chr7_2:66196034-66196053 | Msa1070240:intron | 40.0% |
| GCAGAGGTAGTAGAAGAAAA+CGG | + | chr7_2:66196122-66196141 | Msa1070240:CDS | 40.0% | |
| AAGAAAACGGAAAGCCTTCA+TGG | + | chr7_2:66196135-66196154 | Msa1070240:CDS | 40.0% | |
| AATAACCGCTTTGTCCATGA+AGG | - | chr7_2:66196152-66196171 | None:intergenic | 40.0% | |
| !! | AGTTGCTGTGCTCTAAAATC+AGG | + | chr7_2:66196183-66196202 | Msa1070240:CDS | 40.0% |
| !! | CTGTGCTCTAAAATCAGGTT+GGG | + | chr7_2:66196188-66196207 | Msa1070240:intron | 40.0% |
| TCTTTCTACTTGCAGAGAAG+AGG | + | chr7_2:66196441-66196460 | Msa1070240:intron | 40.0% | |
| TGATGTACTCTATCATGCCA+TGG | + | chr7_2:66196528-66196547 | Msa1070240:CDS | 40.0% | |
| ! | AAGAAGTTTTGCAGGTTCTG+AGG | + | chr7_2:66196581-66196600 | Msa1070240:CDS | 40.0% |
| ! | CTTTTCCTCAATACCAGACT+TGG | - | chr7_2:66196617-66196636 | None:intergenic | 40.0% |
| !! | TCATTGTTCCACCGATTTCT+GGG | - | chr7_2:66196653-66196672 | None:intergenic | 40.0% |
| !! | TTCATTGTTCCACCGATTTC+TGG | - | chr7_2:66196654-66196673 | None:intergenic | 40.0% |
| AACAACTCGTCTTGTACATC+TGG | - | chr7_2:66196732-66196751 | None:intergenic | 40.0% | |
| GACGAGTTGTTACCATGAAT+AGG | + | chr7_2:66196741-66196760 | Msa1070240:three_prime_UTR | 40.0% | |
| CGAGTTGTTACCATGAATAG+GGG | + | chr7_2:66196743-66196762 | Msa1070240:three_prime_UTR | 40.0% | |
| ACTCGTATCCTCTTGTAATG+TGG | + | chr7_2:66196862-66196881 | Msa1070240:three_prime_UTR | 40.0% | |
| TGGCGTGCAAGTCATAAATG+TGG | - | chr7_2:66192835-66192854 | None:intergenic | 45.0% | |
| GCTATAGCACTGTTGTGTAG+CGG | - | chr7_2:66193140-66193159 | None:intergenic | 45.0% | |
| ! | TTGTGAAGTACCAGCTATGG+TGG | - | chr7_2:66193164-66193183 | None:intergenic | 45.0% |
| CCCACAGCGTTAGTTAGTTA+TGG | + | chr7_2:66193422-66193441 | Msa1070240:intron | 45.0% | |
| ! | ATTGAACCATAGAGTGGGCT+AGG | + | chr7_2:66193842-66193861 | Msa1070240:intron | 45.0% |
| TAAACGGTGTGCATTAAGGC+TGG | - | chr7_2:66193911-66193930 | None:intergenic | 45.0% | |
| CTTCTTGACAGTAGCCCATA+TGG | - | chr7_2:66193963-66193982 | None:intergenic | 45.0% | |
| ! | CATATGGGCTACTGTCAAGA+AGG | + | chr7_2:66193961-66193980 | Msa1070240:intron | 45.0% |
| !! | CAAAGTCAAGTGGCTCTAAG+AGG | + | chr7_2:66194049-66194068 | Msa1070240:five_prime_UTR | 45.0% |
| GGATTGAAGCATGTGAACGT+TGG | - | chr7_2:66194097-66194116 | None:intergenic | 45.0% | |
| ! | ATTGCACTTCTGGAAACCTC+TGG | - | chr7_2:66194121-66194140 | None:intergenic | 45.0% |
| ! | AATCTCTCGTTTTCCAGCCA+TGG | + | chr7_2:66194138-66194157 | Msa1070240:CDS | 45.0% |
| AGAAGCAAAAGCCAAGTGGT+TGG | - | chr7_2:66194187-66194206 | None:intergenic | 45.0% | |
| GCATAGAAGCAAAAGCCAAG+TGG | - | chr7_2:66194191-66194210 | None:intergenic | 45.0% | |
| CAACTCCTTACGGTGACATT+TGG | + | chr7_2:66194528-66194547 | Msa1070240:intron | 45.0% | |
| AACGTCTATAAGCAGGATGG+TGG | - | chr7_2:66194711-66194730 | None:intergenic | 45.0% | |
| AGGAACGTCTATAAGCAGGA+TGG | - | chr7_2:66194714-66194733 | None:intergenic | 45.0% | |
| TCCCCTATGTTAGCATGCTT+TGG | - | chr7_2:66194784-66194803 | None:intergenic | 45.0% | |
| !!! | GGGGCAACCATTTAGTTTTG+TGG | + | chr7_2:66195273-66195292 | Msa1070240:intron | 45.0% |
| TTGTCAGGTAGACTCACTGT+TGG | + | chr7_2:66195495-66195514 | Msa1070240:intron | 45.0% | |
| CACTGTTGGACGGTGTAAAA+TGG | + | chr7_2:66195509-66195528 | Msa1070240:CDS | 45.0% | |
| GGATGATAAAGGTTTGGCTG+TGG | + | chr7_2:66195531-66195550 | Msa1070240:CDS | 45.0% | |
| AGCTCAGAATGTTGACACAG+GGG | + | chr7_2:66195558-66195577 | Msa1070240:CDS | 45.0% | |
| CTTTGCAAATAGAGAAGCCG+TGG | + | chr7_2:66195597-66195616 | Msa1070240:CDS | 45.0% | |
| GGAAGGCCACATTCTATAGT+CGG | + | chr7_2:66195638-66195657 | Msa1070240:CDS | 45.0% | |
| CCACATTCTATAGTCGGTCA+CGG | + | chr7_2:66195644-66195663 | Msa1070240:CDS | 45.0% | |
| GCCTTTCTCTACAGGAAAAC+AGG | - | chr7_2:66196001-66196020 | None:intergenic | 45.0% | |
| ! | TGGTATCTGCTACAGGTTGA+AGG | + | chr7_2:66196041-66196060 | Msa1070240:intron | 45.0% |
| GAAAGCCTTCATGGACAAAG+CGG | + | chr7_2:66196144-66196163 | Msa1070240:CDS | 45.0% | |
| !! | GCTGTGCTCTAAAATCAGGT+TGG | + | chr7_2:66196187-66196206 | Msa1070240:intron | 45.0% |
| ! | CTATCATGCCATGGTTCTGT+TGG | + | chr7_2:66196537-66196556 | Msa1070240:CDS | 45.0% |
| CTTTAGTGCCAACAGAACCA+TGG | - | chr7_2:66196548-66196567 | None:intergenic | 45.0% | |
| ! | CATGGTTCTGTTGGCACTAA+AGG | + | chr7_2:66196546-66196565 | Msa1070240:CDS | 45.0% |
| AAGTCGCACAACCCAGAAAT+CGG | + | chr7_2:66196639-66196658 | Msa1070240:CDS | 45.0% | |
| GCTAGAGTTACCCCTATTCA+TGG | - | chr7_2:66196756-66196775 | None:intergenic | 45.0% | |
| !! | ATAGTTATTATAATATTATT+TGG | - | chr7_2:66196982-66197001 | None:intergenic | 5.0% |
| !! | ATTATAATAACTATTTATTA+TGG | + | chr7_2:66196988-66197007 | Msa1070240:three_prime_UTR | 5.0% |
| ! | ATGGGAGTGAAAGTGCAGCA+AGG | + | chr7_2:66193476-66193495 | Msa1070240:intron | 50.0% |
| ! | TGGGAGTGAAAGTGCAGCAA+GGG | + | chr7_2:66193477-66193496 | Msa1070240:intron | 50.0% |
| ! | TGTCACCTAAGTGCTACTCG+TGG | + | chr7_2:66193727-66193746 | Msa1070240:intron | 50.0% |
| GCTATCCACGAGTAGCACTT+AGG | - | chr7_2:66193735-66193754 | None:intergenic | 50.0% | |
| TTGGTCCTGTAACCGCATCT+GGG | - | chr7_2:66194168-66194187 | None:intergenic | 50.0% | |
| TATGCACACATCTGACCCCA+AGG | + | chr7_2:66194206-66194225 | Msa1070240:CDS | 50.0% | |
| CAAGCCCAAATGTCACCGTA+AGG | - | chr7_2:66194536-66194555 | None:intergenic | 50.0% | |
| !! | GATGGTGGAGGTCACATGTT+AGG | - | chr7_2:66194696-66194715 | None:intergenic | 50.0% |
| ! | GTCTATAAGCAGGATGGTGG+AGG | - | chr7_2:66194708-66194727 | None:intergenic | 50.0% |
| CAGGTAGACTCACTGTTGGA+CGG | + | chr7_2:66195499-66195518 | Msa1070240:intron | 50.0% | |
| ACAGGGGCAATACTGATGCA+AGG | + | chr7_2:66195574-66195593 | Msa1070240:CDS | 50.0% | |
| TGTGGCCTTCCGAGAAGATA+TGG | - | chr7_2:66195629-66195648 | None:intergenic | 50.0% | |
| CCGTGACCGACTATAGAATG+TGG | - | chr7_2:66195647-66195666 | None:intergenic | 50.0% | |
| !! | TGTTGCTGGCCTTTCTCTAC+AGG | - | chr7_2:66196009-66196028 | None:intergenic | 50.0% |
| GTCAACAATATCCCAGCGCA+AGG | + | chr7_2:66196100-66196119 | Msa1070240:CDS | 50.0% | |
| ! | AGGCAGCGATTTTCCAAGTC+TGG | + | chr7_2:66196601-66196620 | Msa1070240:CDS | 50.0% |
| TGCTATAGCGCCACCATAGC+TGG | + | chr7_2:66193151-66193170 | Msa1070240:intron | 55.0% | |
| ! | GAAAGTGCAGCAAGGGCAAC+TGG | + | chr7_2:66193484-66193503 | Msa1070240:intron | 55.0% |
| GGATTGCCTAGCCCACTCTA+TGG | - | chr7_2:66193851-66193870 | None:intergenic | 55.0% | |
| ! | GTGCATTAAGGCTGGCCCAT+AGG | - | chr7_2:66193903-66193922 | None:intergenic | 55.0% |
| TGGGCTACTGTCAAGAAGGG+TGG | + | chr7_2:66193965-66193984 | Msa1070240:intron | 55.0% | |
| GGGTGGCTCAGCTCATATTG+AGG | + | chr7_2:66193982-66194001 | Msa1070240:intron | 55.0% | |
| CACATGCTTCAATCCGCCAG+AGG | + | chr7_2:66194102-66194121 | Msa1070240:CDS | 55.0% | |
| ! | GCACTTCTGGAAACCTCTGG+CGG | - | chr7_2:66194118-66194137 | None:intergenic | 55.0% |
| AGCCATGGCTATCCCAGATG+CGG | + | chr7_2:66194153-66194172 | Msa1070240:CDS | 55.0% | |
| ! | AACCGCATCTGGGATAGCCA+TGG | - | chr7_2:66194158-66194177 | None:intergenic | 55.0% |
| GCTATCCCAGATGCGGTTAC+AGG | + | chr7_2:66194160-66194179 | Msa1070240:CDS | 55.0% | |
| GTTGGTCCTGTAACCGCATC+TGG | - | chr7_2:66194169-66194188 | None:intergenic | 55.0% | |
| CGGTTACAGGACCAACCACT+TGG | + | chr7_2:66194173-66194192 | Msa1070240:CDS | 55.0% | |
| CGGTCATCGTTGTGGACCAA+AGG | + | chr7_2:66195664-66195683 | Msa1070240:CDS | 55.0% | |
| TAGGCCCATCAGGTTTCCCA+AGG | - | chr7_2:66195877-66195896 | None:intergenic | 55.0% | |
| ! | AGCATGTTTCTGCCCCTGTG+TGG | - | chr7_2:66195904-66195923 | None:intergenic | 55.0% |
| AATATCCCAGCGCAAGGCAG+AGG | + | chr7_2:66196106-66196125 | Msa1070240:CDS | 55.0% | |
| TACTACCTCTGCCTTGCGCT+GGG | - | chr7_2:66196114-66196133 | None:intergenic | 55.0% | |
| GTCACGCACTGCTTCAGAGA+TGG | + | chr7_2:66196504-66196523 | Msa1070240:CDS | 55.0% | |
| TCGCACAACCCAGAAATCGG+TGG | + | chr7_2:66196642-66196661 | Msa1070240:CDS | 55.0% | |
| ! | GCATCTGGGATAGCCATGGC+TGG | - | chr7_2:66194154-66194173 | None:intergenic | 60.0% |
| GTCGGTCACGGTCATCGTTG+TGG | + | chr7_2:66195656-66195675 | Msa1070240:CDS | 60.0% | |
| ATGGGCCTACCTGCCACACA+GGG | + | chr7_2:66195888-66195907 | Msa1070240:CDS | 60.0% | |
| ! | TGTTTCTGCCCCTGTGTGGC+AGG | - | chr7_2:66195900-66195919 | None:intergenic | 60.0% |
| CTACTACCTCTGCCTTGCGC+TGG | - | chr7_2:66196115-66196134 | None:intergenic | 60.0% | |
| GTGTGGCAGGTAGGCCCATC+AGG | - | chr7_2:66195887-66195906 | None:intergenic | 65.0% | |
| GATGGGCCTACCTGCCACAC+AGG | + | chr7_2:66195887-66195906 | Msa1070240:CDS | 65.0% | |
| TGGGCCTACCTGCCACACAG+GGG | + | chr7_2:66195889-66195908 | Msa1070240:CDS | 65.0% | |
| TCTGCCCCTGTGTGGCAGGT+AGG | - | chr7_2:66195896-66195915 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 66192632 | 66197020 | 66192632 | ID=Msa1070240;Name=Msa1070240 |
| chr7_2 | mRNA | 66192632 | 66197020 | 66192632 | ID=Msa1070240-mRNA-1;Parent=Msa1070240;Name=Msa1070240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=152|0.8|0.83|1|0.8|0.66|6|348|288 |
| chr7_2 | exon | 66192632 | 66192745 | 66192632 | ID=Msa1070240-mRNA-1:exon:14139;Parent=Msa1070240-mRNA-1 |
| chr7_2 | exon | 66194046 | 66194227 | 66194046 | ID=Msa1070240-mRNA-1:exon:14140;Parent=Msa1070240-mRNA-1 |
| chr7_2 | exon | 66195502 | 66195762 | 66195502 | ID=Msa1070240-mRNA-1:exon:14141;Parent=Msa1070240-mRNA-1 |
| chr7_2 | exon | 66195866 | 66195961 | 66195866 | ID=Msa1070240-mRNA-1:exon:14142;Parent=Msa1070240-mRNA-1 |
| chr7_2 | exon | 66196056 | 66196204 | 66196056 | ID=Msa1070240-mRNA-1:exon:14143;Parent=Msa1070240-mRNA-1 |
| chr7_2 | exon | 66196456 | 66197020 | 66196456 | ID=Msa1070240-mRNA-1:exon:14144;Parent=Msa1070240-mRNA-1 |
| chr7_2 | five_prime_UTR | 66192632 | 66192745 | 66192632 | ID=Msa1070240-mRNA-1:five_prime_utr;Parent=Msa1070240-mRNA-1 |
| chr7_2 | five_prime_UTR | 66194046 | 66194083 | 66194046 | ID=Msa1070240-mRNA-1:five_prime_utr;Parent=Msa1070240-mRNA-1 |
| chr7_2 | CDS | 66194084 | 66194227 | 66194084 | ID=Msa1070240-mRNA-1:cds;Parent=Msa1070240-mRNA-1 |
| chr7_2 | CDS | 66195502 | 66195762 | 66195502 | ID=Msa1070240-mRNA-1:cds;Parent=Msa1070240-mRNA-1 |
| chr7_2 | CDS | 66195866 | 66195961 | 66195866 | ID=Msa1070240-mRNA-1:cds;Parent=Msa1070240-mRNA-1 |
| chr7_2 | CDS | 66196056 | 66196204 | 66196056 | ID=Msa1070240-mRNA-1:cds;Parent=Msa1070240-mRNA-1 |
| chr7_2 | CDS | 66196456 | 66196672 | 66196456 | ID=Msa1070240-mRNA-1:cds;Parent=Msa1070240-mRNA-1 |
| chr7_2 | three_prime_UTR | 66196673 | 66197020 | 66196673 | ID=Msa1070240-mRNA-1:three_prime_utr;Parent=Msa1070240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
