Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031140 | XP_013449475.1 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031140 | sp|O82768|HIS2_ARATH | 75.319 | 235 | 52 | 2 | 48 | 281 | 51 | 280 | 1.90e-128 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031140 | A0A072U2X9 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1031140 | Msa1070240 | 0.945768 | 1.643862e-104 | -8.615850e-47 |
| Msa1031140 | Msa1119580 | 0.807778 | 4.280728e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031140 | MtrunA17_Chr7g0252441 | 96.516 | 287 | 5 | 1 | 1 | 287 | 1 | 282 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1031140 | AT1G31860.1 | 75.319 | 235 | 52 | 2 | 48 | 281 | 51 | 280 | 1.93e-129 | 369 |
| Msa1031140 | AT1G31860.2 | 73.659 | 205 | 48 | 2 | 78 | 281 | 1 | 200 | 1.64e-108 | 313 |
| Msa1031140 | AT1G31860.3 | 76.023 | 171 | 35 | 2 | 48 | 217 | 51 | 216 | 9.39e-93 | 274 |
Find 102 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATTGTTCCACCGATTTC+TGG | 0.137364 | 7_1:-65572953 | None:intergenic |
| ATTTGTCCAACTTAGATATT+TGG | 0.150858 | 7_1:+65573140 | Msa1031140:three_prime_UTR |
| CACTGTTGGACGGTGTAAAA+TGG | 0.157529 | 7_1:+65571811 | Msa1031140:CDS |
| CAAGCAACATATTTAGTTTC+TGG | 0.177202 | 7_1:+65573000 | Msa1031140:three_prime_UTR |
| ATAGTTATTATAATATTATT+TGG | 0.219017 | 7_1:-65573281 | None:intergenic |
| ATGGACATTGATGAAATTAT+TGG | 0.223699 | 7_1:-65571997 | None:intergenic |
| ATTATAATAACTATTTATTA+TGG | 0.245921 | 7_1:+65573290 | Msa1031140:three_prime_UTR |
| ATGAAGGGAAGATGTGAAAT+TGG | 0.271843 | 7_1:-65569009 | None:intergenic |
| GTTGGTCCTGTAACCGCATC+TGG | 0.276016 | 7_1:-65570468 | None:intergenic |
| AAAACGAGAGATTGCACTTC+TGG | 0.284409 | 7_1:-65570430 | None:intergenic |
| TTCATCGCTGCTATTCATTC+AGG | 0.317541 | 7_1:+65569027 | Msa1031140:five_prime_UTR |
| ATTATTGGAGGTCTCTCCTT+TGG | 0.330042 | 7_1:-65571982 | None:intergenic |
| GCTATCCCAGATGCGGTTAC+AGG | 0.343137 | 7_1:+65570462 | Msa1031140:CDS |
| ACGAGTTGTTACCATGAATA+GGG | 0.355971 | 7_1:+65573044 | Msa1031140:three_prime_UTR |
| AAATTCTTGTGATGATAGTA+TGG | 0.359955 | 7_1:-65573225 | None:intergenic |
| TGAAGGGAAGATGTGAAATT+GGG | 0.365325 | 7_1:-65569008 | None:intergenic |
| GTGTGGCAGGTAGGCCCATC+AGG | 0.375048 | 7_1:-65572186 | None:intergenic |
| CTACTACCTCTGCCTTGCGC+TGG | 0.376948 | 7_1:-65572414 | None:intergenic |
| AAGTGAAGATGGAGAAAGAC+AGG | 0.378838 | 7_1:-65568953 | None:intergenic |
| ACAGGTTGAAGGAAACAAAT+TGG | 0.394156 | 7_1:+65572354 | Msa1031140:intron |
| AAGAAAACGGAAAGCCTTCA+TGG | 0.412346 | 7_1:+65572437 | Msa1031140:CDS |
| TCATTGTTCCACCGATTTCT+GGG | 0.414624 | 7_1:-65572952 | None:intergenic |
| GATGTGAAATTGGGGTTGTA+AGG | 0.419545 | 7_1:-65568999 | None:intergenic |
| GCTAGAGTTACCCCTATTCA+TGG | 0.425615 | 7_1:-65573055 | None:intergenic |
| GTTGGGTTAGAAAGTGAAGA+TGG | 0.429235 | 7_1:-65568964 | None:intergenic |
| TGTGGCCTTCCGAGAAGATA+TGG | 0.431591 | 7_1:-65571928 | None:intergenic |
| AACAACTCGTCTTGTACATC+TGG | 0.433413 | 7_1:-65573031 | None:intergenic |
| TAAGAGGCGTTTCAATTCAA+TGG | 0.438518 | 7_1:+65570367 | Msa1031140:exon |
| TAAGGAAGAAGAGTTGAGTT+GGG | 0.445699 | 7_1:-65568981 | None:intergenic |
| AGTTGCTGTGCTCTAAAATC+AGG | 0.447400 | 7_1:+65572485 | Msa1031140:CDS |
| GACGAGTTGTTACCATGAAT+AGG | 0.450522 | 7_1:+65573043 | Msa1031140:three_prime_UTR |
| TACTACCTCTGCCTTGCGCT+GGG | 0.453376 | 7_1:-65572413 | None:intergenic |
| TGTTTCTGCCCCTGTGTGGC+AGG | 0.457775 | 7_1:-65572199 | None:intergenic |
| TGGTATCTGCTACAGGTTGA+AGG | 0.459991 | 7_1:+65572343 | Msa1031140:intron |
| CATGGTTCTGTTGGCACTAA+AGG | 0.463951 | 7_1:+65572848 | Msa1031140:CDS |
| TGGCTACAACCATATCTTCT+CGG | 0.473692 | 7_1:+65571919 | Msa1031140:CDS |
| CGAGTTCCAAATATCTAAGT+TGG | 0.475665 | 7_1:-65573146 | None:intergenic |
| TGAATGAATAGCAGCGATGA+AGG | 0.476212 | 7_1:-65569025 | None:intergenic |
| AAGTCGCACAACCCAGAAAT+CGG | 0.479737 | 7_1:+65572941 | Msa1031140:CDS |
| TCTGCCCCTGTGTGGCAGGT+AGG | 0.494555 | 7_1:-65572195 | None:intergenic |
| TCTTTCAACAAGTCAAAGAC+TGG | 0.497321 | 7_1:-65572234 | None:intergenic |
| GTAAGGAAGAAGAGTTGAGT+TGG | 0.497769 | 7_1:-65568982 | None:intergenic |
| CAACTTAGATAATATACCTT+GGG | 0.500220 | 7_1:+65572160 | Msa1031140:intron |
| CTATCATGCCATGGTTCTGT+TGG | 0.502158 | 7_1:+65572839 | Msa1031140:CDS |
| GGTGTAAAATGGGATGATAA+AGG | 0.507922 | 7_1:+65571822 | Msa1031140:CDS |
| ACTGTTGGACGGTGTAAAAT+GGG | 0.513858 | 7_1:+65571812 | Msa1031140:CDS |
| GACATTGATGAAATTATTGG+AGG | 0.523136 | 7_1:-65571994 | None:intergenic |
| GTCGGTCACGGTCATCGTTG+TGG | 0.523921 | 7_1:+65571958 | Msa1031140:CDS |
| TGACTTGTTGAAAGAAGAAG+AGG | 0.531116 | 7_1:+65572242 | Msa1031140:CDS |
| TCTTTCTACTTGCAGAGAAG+AGG | 0.537580 | 7_1:+65572743 | Msa1031140:intron |
| ATTGCACTTCTGGAAACCTC+TGG | 0.541828 | 7_1:-65570420 | None:intergenic |
| AAAATGGGATGATAAAGGTT+TGG | 0.543571 | 7_1:+65571827 | Msa1031140:CDS |
| AATAACCGCTTTGTCCATGA+AGG | 0.545592 | 7_1:-65572451 | None:intergenic |
| GATGGGCCTACCTGCCACAC+AGG | 0.546338 | 7_1:+65572189 | Msa1031140:CDS |
| GCAGAGGTAGTAGAAGAAAA+CGG | 0.548101 | 7_1:+65572424 | Msa1031140:CDS |
| ACAACTTAGATAATATACCT+TGG | 0.549394 | 7_1:+65572159 | Msa1031140:intron |
| ATGGGCCTACCTGCCACACA+GGG | 0.551373 | 7_1:+65572190 | Msa1031140:CDS |
| CGGTCATCGTTGTGGACCAA+AGG | 0.552026 | 7_1:+65571966 | Msa1031140:CDS |
| CACAATCAAGAAAGACATCA+TGG | 0.552848 | 7_1:-65572016 | None:intergenic |
| ATATACCTTGGGAAACCTGA+TGG | 0.557467 | 7_1:+65572171 | Msa1031140:CDS |
| GCATCTGGGATAGCCATGGC+TGG | 0.559498 | 7_1:-65570453 | None:intergenic |
| GTCACGCACTGCTTCAGAGA+TGG | 0.565116 | 7_1:+65572806 | Msa1031140:CDS |
| TTTACAGTTGCAAAGTCAAG+TGG | 0.565123 | 7_1:+65570341 | Msa1031140:intron |
| AATATCCCAGCGCAAGGCAG+AGG | 0.568929 | 7_1:+65572408 | Msa1031140:CDS |
| AGAAGATATGGTTGTAGCCA+CGG | 0.570030 | 7_1:-65571916 | None:intergenic |
| CGGTTACAGGACCAACCACT+TGG | 0.571408 | 7_1:+65570475 | Msa1031140:CDS |
| TTGGTCCTGTAACCGCATCT+GGG | 0.575216 | 7_1:-65570467 | None:intergenic |
| TGATGTACTCTATCATGCCA+TGG | 0.578899 | 7_1:+65572830 | Msa1031140:CDS |
| TAAATTGACCACATTACAAG+AGG | 0.582351 | 7_1:-65573172 | None:intergenic |
| CAAAGTCAAGTGGCTCTAAG+AGG | 0.585169 | 7_1:+65570351 | Msa1031140:five_prime_UTR |
| CACATGCTTCAATCCGCCAG+AGG | 0.586849 | 7_1:+65570404 | Msa1031140:CDS |
| TATACCTTGGGAAACCTGAT+GGG | 0.588739 | 7_1:+65572172 | Msa1031140:CDS |
| GAATGAATAGCAGCGATGAA+GGG | 0.599402 | 7_1:-65569024 | None:intergenic |
| GTCAACAATATCCCAGCGCA+AGG | 0.606963 | 7_1:+65572402 | Msa1031140:CDS |
| GGAAGGCCACATTCTATAGT+CGG | 0.610737 | 7_1:+65571940 | Msa1031140:CDS |
| CAGGTAGACTCACTGTTGGA+CGG | 0.614205 | 7_1:+65571801 | Msa1031140:intron |
| TACAACCATATCTTCTCGGA+AGG | 0.619181 | 7_1:+65571923 | Msa1031140:CDS |
| CGAGTTGTTACCATGAATAG+GGG | 0.620499 | 7_1:+65573045 | Msa1031140:three_prime_UTR |
| AACCGCATCTGGGATAGCCA+TGG | 0.622178 | 7_1:-65570457 | None:intergenic |
| GCACTTCTGGAAACCTCTGG+CGG | 0.626654 | 7_1:-65570417 | None:intergenic |
| AGAAGCAAAAGCCAAGTGGT+TGG | 0.627767 | 7_1:-65570486 | None:intergenic |
| TATGCACACATCTGACCCCA+AGG | 0.631404 | 7_1:+65570508 | Msa1031140:CDS |
| CTTTGCAAATAGAGAAGCCG+TGG | 0.632765 | 7_1:+65571899 | Msa1031140:CDS |
| ACTCGTATCCTCTTGTAATG+TGG | 0.638626 | 7_1:+65573164 | Msa1031140:three_prime_UTR |
| CCACATTCTATAGTCGGTCA+CGG | 0.639280 | 7_1:+65571946 | Msa1031140:CDS |
| TAGGCCCATCAGGTTTCCCA+AGG | 0.643905 | 7_1:-65572176 | None:intergenic |
| TGAAACACTAGAGAATAATG+AGG | 0.646491 | 7_1:+65572779 | Msa1031140:CDS |
| ATAGCTCAGAATGTTGACAC+AGG | 0.647706 | 7_1:+65571858 | Msa1031140:CDS |
| AGCCATGGCTATCCCAGATG+CGG | 0.651262 | 7_1:+65570455 | Msa1031140:CDS |
| TTGTCAGGTAGACTCACTGT+TGG | 0.652198 | 7_1:+65571797 | Msa1031140:intron |
| TAGCTCAGAATGTTGACACA+GGG | 0.653091 | 7_1:+65571859 | Msa1031140:CDS |
| CTTTAGTGCCAACAGAACCA+TGG | 0.657861 | 7_1:-65572847 | None:intergenic |
| GAAGGGAAGATGTGAAATTG+GGG | 0.659208 | 7_1:-65569007 | None:intergenic |
| ACAGGGGCAATACTGATGCA+AGG | 0.659548 | 7_1:+65571876 | Msa1031140:CDS |
| AGCATGTTTCTGCCCCTGTG+TGG | 0.667419 | 7_1:-65572203 | None:intergenic |
| GGATGATAAAGGTTTGGCTG+TGG | 0.671785 | 7_1:+65571833 | Msa1031140:CDS |
| TCGCACAACCCAGAAATCGG+TGG | 0.673876 | 7_1:+65572944 | Msa1031140:CDS |
| CCGTGACCGACTATAGAATG+TGG | 0.681377 | 7_1:-65571946 | None:intergenic |
| GCATAGAAGCAAAAGCCAAG+TGG | 0.692528 | 7_1:-65570490 | None:intergenic |
| GGATTGAAGCATGTGAACGT+TGG | 0.704472 | 7_1:-65570396 | None:intergenic |
| GAAAGCCTTCATGGACAAAG+CGG | 0.708284 | 7_1:+65572446 | Msa1031140:CDS |
| AGCTCAGAATGTTGACACAG+GGG | 0.720988 | 7_1:+65571860 | Msa1031140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCAAAAAACATTTTAAAT+GGG | - | chr7_1:65570174-65570193 | None:intergenic | 10.0% |
| !!! | TTATCAAAAAACATTTTAAA+TGG | - | chr7_1:65570175-65570194 | None:intergenic | 10.0% |
| !! | GTTTAAAAAATAAATAAATG+AGG | + | chr7_1:65570940-65570959 | Msa1031140:intron | 10.0% |
| !! | AAAATAAAATTAATGTTTCA+TGG | - | chr7_1:65572644-65572663 | None:intergenic | 10.0% |
| !! | GAATAATTTCATCAAATATA+TGG | - | chr7_1:65569158-65569177 | None:intergenic | 15.0% |
| !!! | TTTTTTAATTAAGTCTGAAT+TGG | + | chr7_1:65569198-65569217 | Msa1031140:intron | 15.0% |
| !! | AATAAGAAGATATAAACAAT+GGG | + | chr7_1:65569760-65569779 | Msa1031140:intron | 15.0% |
| !! | TAAAAATGTAAAAGAATTTG+AGG | - | chr7_1:65571609-65571628 | None:intergenic | 15.0% |
| !! | TATTATTAACAGCATATTTA+CGG | - | chr7_1:65571638-65571657 | None:intergenic | 15.0% |
| !! | TAAAAAATGAACATTTGACA+TGG | + | chr7_1:65569355-65569374 | Msa1031140:intron | 20.0% |
| !! | TTATAACAATGTTGTAATTG+CGG | + | chr7_1:65569387-65569406 | Msa1031140:intron | 20.0% |
| !!! | TAACAACATTGGTTTATATA+AGG | + | chr7_1:65569542-65569561 | Msa1031140:intron | 20.0% |
| !!! | TTTATATAAGGCATTCTTAT+TGG | + | chr7_1:65569554-65569573 | Msa1031140:intron | 20.0% |
| !!! | ATAACATAAGCAATTTTTGT+CGG | + | chr7_1:65569683-65569702 | Msa1031140:intron | 20.0% |
| !! | GAATAAGAAGATATAAACAA+TGG | + | chr7_1:65569759-65569778 | Msa1031140:intron | 20.0% |
| !!! | AAATGTTTTTTGATAACGTA+AGG | + | chr7_1:65570179-65570198 | Msa1031140:intron | 20.0% |
| !!! | ACTAGTTTCTTTCTTATATT+TGG | + | chr7_1:65570552-65570571 | Msa1031140:intron | 20.0% |
| !! | AATCAAACTAAACAAAACAA+AGG | + | chr7_1:65570775-65570794 | Msa1031140:intron | 20.0% |
| !! | ATCAAACTAAACAAAACAAA+GGG | + | chr7_1:65570776-65570795 | Msa1031140:intron | 20.0% |
| !! | AATTGGACAATAAAAAAAGA+TGG | - | chr7_1:65570803-65570822 | None:intergenic | 20.0% |
| !! | AATAACAATATTTCTCAGAT+AGG | - | chr7_1:65571036-65571055 | None:intergenic | 20.0% |
| !!! | TGTTATTTTATAGATAGACA+AGG | + | chr7_1:65571049-65571068 | Msa1031140:intron | 20.0% |
| !! | GTTATTATCACAATTTCAAT+AGG | - | chr7_1:65571519-65571538 | None:intergenic | 20.0% |
| !! | TTTGTATTTCTTAGTTCAAA+TGG | + | chr7_1:65571554-65571573 | Msa1031140:intron | 20.0% |
| !! | TTGTATTTCTTAGTTCAAAT+GGG | + | chr7_1:65571555-65571574 | Msa1031140:intron | 20.0% |
| !! | TATTATCTAAGTTGTTATCA+AGG | - | chr7_1:65572154-65572173 | None:intergenic | 20.0% |
| !! | AAAGTTTATGCATTTTGTTG+AGG | + | chr7_1:65569315-65569334 | Msa1031140:intron | 25.0% |
| ! | GATATAGAGCTATAAAATTC+CGG | - | chr7_1:65569513-65569532 | None:intergenic | 25.0% |
| ! | AAACCAATGTTGTTAAATAG+TGG | - | chr7_1:65569537-65569556 | None:intergenic | 25.0% |
| ! | GACAAAAATTGCTTATGTTA+TGG | - | chr7_1:65569684-65569703 | None:intergenic | 25.0% |
| ! | ATATGGTAAAAAAGTTCACA+GGG | - | chr7_1:65570248-65570267 | None:intergenic | 25.0% |
| !!! | TGTGAACTTTTTTACCATAT+GGG | + | chr7_1:65570248-65570267 | Msa1031140:intron | 25.0% |
| ! | CTTTCTTATATTTGGACAAT+TGG | + | chr7_1:65570560-65570579 | Msa1031140:intron | 25.0% |
| ! | AACATATCAACTGAAAATGA+AGG | - | chr7_1:65570667-65570686 | None:intergenic | 25.0% |
| !! | TTAAATGACAGTTTTCTTGT+TGG | + | chr7_1:65570861-65570880 | Msa1031140:intron | 25.0% |
| ! | AAATAAATAAATGAGGAACC+TGG | + | chr7_1:65570947-65570966 | Msa1031140:intron | 25.0% |
| ! | TACAATTATATTCATGAACC+AGG | - | chr7_1:65570968-65570987 | None:intergenic | 25.0% |
| ! | CAGTCAAATTGACAATAAAA+TGG | - | chr7_1:65571207-65571226 | None:intergenic | 25.0% |
| !!! | CTCTTGCTTTGAAAAATTAT+TGG | + | chr7_1:65571259-65571278 | Msa1031140:intron | 25.0% |
| ! | AAGTCATGCTTATTTGTAAA+TGG | + | chr7_1:65571303-65571322 | Msa1031140:intron | 25.0% |
| ! | TTATCAGTATCATGATGAAT+GGG | - | chr7_1:65571367-65571386 | None:intergenic | 25.0% |
| ! | ATTATCAGTATCATGATGAA+TGG | - | chr7_1:65571368-65571387 | None:intergenic | 25.0% |
| ! | TTGAACTAAGAAATACAAAC+TGG | - | chr7_1:65571553-65571572 | None:intergenic | 25.0% |
| ! | TGTATTTCTTAGTTCAAATG+GGG | + | chr7_1:65571556-65571575 | Msa1031140:intron | 25.0% |
| ! | TTAATGTGAAACAGAAAACA+AGG | - | chr7_1:65571765-65571784 | None:intergenic | 25.0% |
| !! | TAAAAAGCTAAACTTTTGTC+AGG | + | chr7_1:65571782-65571801 | Msa1031140:intron | 25.0% |
| ! | ATGGACATTGATGAAATTAT+TGG | - | chr7_1:65572000-65572019 | None:intergenic | 25.0% |
| ! | AAAAAGTCAATGCAGAAAAA+CGG | - | chr7_1:65572066-65572085 | None:intergenic | 25.0% |
| !! | TTGTTATTCTTTGTATCATG+TGG | + | chr7_1:65572105-65572124 | Msa1031140:intron | 25.0% |
| ! | ACAACTTAGATAATATACCT+TGG | + | chr7_1:65572159-65572178 | Msa1031140:intron | 25.0% |
| ! | CAACTTAGATAATATACCTT+GGG | + | chr7_1:65572160-65572179 | Msa1031140:intron | 25.0% |
| ! | TAGCTTCAATCAATTAAAAC+AGG | + | chr7_1:65572266-65572285 | Msa1031140:intron | 25.0% |
| !! | CATGAAGAATATGATTTTTG+GGG | - | chr7_1:65572562-65572581 | None:intergenic | 25.0% |
| !! | CCATGAAGAATATGATTTTT+GGG | - | chr7_1:65572563-65572582 | None:intergenic | 25.0% |
| !! | ACCATGAAGAATATGATTTT+TGG | - | chr7_1:65572564-65572583 | None:intergenic | 25.0% |
| !!! | GGAAATGCTTTTTTAAACAA+AGG | - | chr7_1:65572623-65572642 | None:intergenic | 25.0% |
| ! | ATTTGTCCAACTTAGATATT+TGG | + | chr7_1:65573140-65573159 | Msa1031140:three_prime_UTR | 25.0% |
| ! | AAATTCTTGTGATGATAGTA+TGG | - | chr7_1:65573228-65573247 | None:intergenic | 25.0% |
| ! | CTTATTCAACAAAAATCACA+TGG | - | chr7_1:65573259-65573278 | None:intergenic | 25.0% |
| AACGCGAATTTGAAAACAAA+AGG | - | chr7_1:65569111-65569130 | None:intergenic | 30.0% | |
| AAATGCTAATGTCATTAAGC+TGG | + | chr7_1:65569228-65569247 | Msa1031140:intron | 30.0% | |
| AACTCTTTCAGTAATGTAGA+GGG | - | chr7_1:65569606-65569625 | None:intergenic | 30.0% | |
| TTAGTTATGGTTAGAGAGAT+AGG | + | chr7_1:65569737-65569756 | Msa1031140:intron | 30.0% | |
| TAATTGATTGAGAGAGAGAT+AGG | + | chr7_1:65569986-65570005 | Msa1031140:intron | 30.0% | |
| ACAATCTCATGATTTGATGT+TGG | + | chr7_1:65570064-65570083 | Msa1031140:intron | 30.0% | |
| CATATGGTAAAAAAGTTCAC+AGG | - | chr7_1:65570249-65570268 | None:intergenic | 30.0% | |
| !!! | CTGTGAACTTTTTTACCATA+TGG | + | chr7_1:65570247-65570266 | Msa1031140:intron | 30.0% |
| AACTAGTTAGATAGTTGACA+TGG | - | chr7_1:65570539-65570558 | None:intergenic | 30.0% | |
| TTAGCATGTTATTCAGACAA+CGG | + | chr7_1:65570593-65570612 | Msa1031140:intron | 30.0% | |
| AAACCGTACTATATATGTCA+AGG | - | chr7_1:65570902-65570921 | None:intergenic | 30.0% | |
| ! | CTATTTCTTCCAGATGTATT+AGG | + | chr7_1:65571121-65571140 | Msa1031140:intron | 30.0% |
| TCCTATTGTAAGTTATGTAG+TGG | + | chr7_1:65571153-65571172 | Msa1031140:intron | 30.0% | |
| ! | ATTTGACTGTGTAGAAGTAT+CGG | + | chr7_1:65571218-65571237 | Msa1031140:intron | 30.0% |
| TATCAGTATCATGATGAATG+GGG | - | chr7_1:65571366-65571385 | None:intergenic | 30.0% | |
| ! | TCATCATGATACTGATAATG+TGG | + | chr7_1:65571369-65571388 | Msa1031140:intron | 30.0% |
| AAAATGGGATGATAAAGGTT+TGG | + | chr7_1:65571827-65571846 | Msa1031140:CDS | 30.0% | |
| GACATTGATGAAATTATTGG+AGG | - | chr7_1:65571997-65572016 | None:intergenic | 30.0% | |
| CAAACCAATTTAAATGTTGC+TGG | - | chr7_1:65572325-65572344 | None:intergenic | 30.0% | |
| CAGCAACATTTAAATTGGTT+TGG | + | chr7_1:65572323-65572342 | Msa1031140:intron | 30.0% | |
| CCCAAAAATCATATTCTTCA+TGG | + | chr7_1:65572560-65572579 | Msa1031140:intron | 30.0% | |
| AGATGATTGAAGAAAACAGA+TGG | + | chr7_1:65572672-65572691 | Msa1031140:intron | 30.0% | |
| TGAAACACTAGAGAATAATG+AGG | + | chr7_1:65572779-65572798 | Msa1031140:CDS | 30.0% | |
| ! | CAAGCAACATATTTAGTTTC+TGG | + | chr7_1:65573000-65573019 | Msa1031140:three_prime_UTR | 30.0% |
| ATGACAGAGAATAAAAACTC+GGG | - | chr7_1:65573110-65573129 | None:intergenic | 30.0% | |
| CATGACAGAGAATAAAAACT+CGG | - | chr7_1:65573111-65573130 | None:intergenic | 30.0% | |
| TAAATTGACCACATTACAAG+AGG | - | chr7_1:65573175-65573194 | None:intergenic | 30.0% | |
| TAAGGAAGAAGAGTTGAGTT+GGG | - | chr7_1:65568984-65569003 | None:intergenic | 35.0% | |
| TGAAGGGAAGATGTGAAATT+GGG | - | chr7_1:65569011-65569030 | None:intergenic | 35.0% | |
| ATGAAGGGAAGATGTGAAAT+TGG | - | chr7_1:65569012-65569031 | None:intergenic | 35.0% | |
| TCATTAAGCTGGATTCTTCT+TGG | + | chr7_1:65569239-65569258 | Msa1031140:intron | 35.0% | |
| ATCGCAGAAAATAGCAGTTT+AGG | + | chr7_1:65569410-65569429 | Msa1031140:intron | 35.0% | |
| ! | ATATTGTGAAGTACCAGCTA+TGG | - | chr7_1:65569469-65569488 | None:intergenic | 35.0% |
| TGTACTAAATAGCGTATCAC+CGG | + | chr7_1:65569491-65569510 | Msa1031140:intron | 35.0% | |
| TCGCCACTATTTAACAACAT+TGG | + | chr7_1:65569531-65569550 | Msa1031140:intron | 35.0% | |
| ACTCTTTCAGTAATGTAGAG+GGG | - | chr7_1:65569605-65569624 | None:intergenic | 35.0% | |
| CAACTCTTTCAGTAATGTAG+AGG | - | chr7_1:65569607-65569626 | None:intergenic | 35.0% | |
| ACCAAAGCTCTTTGATCTAA+GGG | - | chr7_1:65569838-65569857 | None:intergenic | 35.0% | |
| !!! | ACTTGGGTGACATAGTTTTT+TGG | + | chr7_1:65569890-65569909 | Msa1031140:intron | 35.0% |
| AGTTTGATTGAACCATAGAG+TGG | + | chr7_1:65570138-65570157 | Msa1031140:intron | 35.0% | |
| GTTTGATTGAACCATAGAGT+GGG | + | chr7_1:65570139-65570158 | Msa1031140:intron | 35.0% | |
| !!! | TTTTGATAACGTAAGGCCTA+TGG | + | chr7_1:65570186-65570205 | Msa1031140:intron | 35.0% |
| !! | TTTGATAACGTAAGGCCTAT+GGG | + | chr7_1:65570187-65570206 | Msa1031140:intron | 35.0% |
| TCAATAAACGGTGTGCATTA+AGG | - | chr7_1:65570217-65570236 | None:intergenic | 35.0% | |
| AGGGACAAAAGGTCAATAAA+CGG | - | chr7_1:65570229-65570248 | None:intergenic | 35.0% | |
| AAAAAGTTCACAGGGACAAA+AGG | - | chr7_1:65570240-65570259 | None:intergenic | 35.0% | |
| TTTACAGTTGCAAAGTCAAG+TGG | + | chr7_1:65570341-65570360 | Msa1031140:intron | 35.0% | |
| !! | TAAGAGGCGTTTCAATTCAA+TGG | + | chr7_1:65570367-65570386 | Msa1031140:exon | 35.0% |
| AGTTGACATGGAAATACCTT+GGG | - | chr7_1:65570527-65570546 | None:intergenic | 35.0% | |
| TAGTTGACATGGAAATACCT+TGG | - | chr7_1:65570528-65570547 | None:intergenic | 35.0% | |
| AGAGCCCTTGAGAAAATAAA+GGG | + | chr7_1:65570622-65570641 | Msa1031140:intron | 35.0% | |
| !!! | ACGTCCCTTTATTTTCTCAA+GGG | - | chr7_1:65570629-65570648 | None:intergenic | 35.0% |
| TAAGGAGTTGTCACTGTAAT+TGG | - | chr7_1:65570820-65570839 | None:intergenic | 35.0% | |
| ATTACAGTGACAACTCCTTA+CGG | + | chr7_1:65570820-65570839 | Msa1031140:intron | 35.0% | |
| CGTCCTTGACATATATAGTA+CGG | + | chr7_1:65570896-65570915 | Msa1031140:intron | 35.0% | |
| AATCCTAGACCTAATACATC+TGG | - | chr7_1:65571133-65571152 | None:intergenic | 35.0% | |
| GCCACTACATAACTTACAAT+AGG | - | chr7_1:65571157-65571176 | None:intergenic | 35.0% | |
| !! | TTTGACTGTGTAGAAGTATC+GGG | + | chr7_1:65571219-65571238 | Msa1031140:intron | 35.0% |
| TAACAACTAAAACAGCACCA+AGG | - | chr7_1:65571491-65571510 | None:intergenic | 35.0% | |
| CTTGATGCCACAAAACTAAA+TGG | - | chr7_1:65571585-65571604 | None:intergenic | 35.0% | |
| TGATTGCTTATGAAATGCCA+TGG | + | chr7_1:65571687-65571706 | Msa1031140:intron | 35.0% | |
| GAATGTAACAACAAATGCCA+TGG | - | chr7_1:65571707-65571726 | None:intergenic | 35.0% | |
| ! | GTTACATTCCTTCTCTCTTT+TGG | + | chr7_1:65571718-65571737 | Msa1031140:intron | 35.0% |
| AAAAGACACCAAAAGAGAGA+AGG | - | chr7_1:65571729-65571748 | None:intergenic | 35.0% | |
| GGTGTAAAATGGGATGATAA+AGG | + | chr7_1:65571822-65571841 | Msa1031140:CDS | 35.0% | |
| CACAATCAAGAAAGACATCA+TGG | - | chr7_1:65572019-65572038 | None:intergenic | 35.0% | |
| ! | CAAGAGCTTTTACAGAATCA+CGG | - | chr7_1:65572043-65572062 | None:intergenic | 35.0% |
| TCTTTCAACAAGTCAAAGAC+TGG | - | chr7_1:65572237-65572256 | None:intergenic | 35.0% | |
| !! | TGACTTGTTGAAAGAAGAAG+AGG | + | chr7_1:65572242-65572261 | Msa1031140:CDS | 35.0% |
| AAGGCCAGCAACATTTAAAT+TGG | + | chr7_1:65572318-65572337 | Msa1031140:intron | 35.0% | |
| ! | ACAGGTTGAAGGAAACAAAT+TGG | + | chr7_1:65572354-65572373 | Msa1031140:intron | 35.0% |
| !!! | GATTTTTGGGGTGGAAAAAA+GGG | - | chr7_1:65572550-65572569 | None:intergenic | 35.0% |
| !!! | TGATTTTTGGGGTGGAAAAA+AGG | - | chr7_1:65572551-65572570 | None:intergenic | 35.0% |
| !! | GAAGAATATGATTTTTGGGG+TGG | - | chr7_1:65572559-65572578 | None:intergenic | 35.0% |
| AAGGCAACTTTATAGCAACA+AGG | - | chr7_1:65572604-65572623 | None:intergenic | 35.0% | |
| ! | CAAAGTAGAAGAAGTTTTGC+AGG | + | chr7_1:65572875-65572894 | Msa1031140:CDS | 35.0% |
| ! | ATTTTCCAAGTCTGGTATTG+AGG | + | chr7_1:65572911-65572930 | Msa1031140:CDS | 35.0% |
| ACGAGTTGTTACCATGAATA+GGG | + | chr7_1:65573044-65573063 | Msa1031140:three_prime_UTR | 35.0% | |
| TGACAGAGAATAAAAACTCG+GGG | - | chr7_1:65573109-65573128 | None:intergenic | 35.0% | |
| CGAGTTCCAAATATCTAAGT+TGG | - | chr7_1:65573149-65573168 | None:intergenic | 35.0% | |
| AAGTGAAGATGGAGAAAGAC+AGG | - | chr7_1:65568956-65568975 | None:intergenic | 40.0% | |
| ! | GTTGGGTTAGAAAGTGAAGA+TGG | - | chr7_1:65568967-65568986 | None:intergenic | 40.0% |
| GTAAGGAAGAAGAGTTGAGT+TGG | - | chr7_1:65568985-65569004 | None:intergenic | 40.0% | |
| GATGTGAAATTGGGGTTGTA+AGG | - | chr7_1:65569002-65569021 | None:intergenic | 40.0% | |
| GAAGGGAAGATGTGAAATTG+GGG | - | chr7_1:65569010-65569029 | None:intergenic | 40.0% | |
| GAATGAATAGCAGCGATGAA+GGG | - | chr7_1:65569027-65569046 | None:intergenic | 40.0% | |
| TGAATGAATAGCAGCGATGA+AGG | - | chr7_1:65569028-65569047 | None:intergenic | 40.0% | |
| TTCATCGCTGCTATTCATTC+AGG | + | chr7_1:65569027-65569046 | Msa1031140:five_prime_UTR | 40.0% | |
| TGTTGAGGACAACTATTGTC+AGG | + | chr7_1:65569330-65569349 | Msa1031140:intron | 40.0% | |
| CTCTTTCAGTAATGTAGAGG+GGG | - | chr7_1:65569604-65569623 | None:intergenic | 40.0% | |
| TTTGTCGGCATCATACTGTT+TGG | + | chr7_1:65569698-65569717 | Msa1031140:intron | 40.0% | |
| CCATAACTAACTAACGCTGT+GGG | - | chr7_1:65569727-65569746 | None:intergenic | 40.0% | |
| ACCATAACTAACTAACGCTG+TGG | - | chr7_1:65569728-65569747 | None:intergenic | 40.0% | |
| TCCCTTAGATCAAAGAGCTT+TGG | + | chr7_1:65569834-65569853 | Msa1031140:intron | 40.0% | |
| GACCAAAGCTCTTTGATCTA+AGG | - | chr7_1:65569839-65569858 | None:intergenic | 40.0% | |
| ! | TGTAGATAGCCGATTTCACT+TGG | + | chr7_1:65569873-65569892 | Msa1031140:intron | 40.0% |
| ! | GTAGATAGCCGATTTCACTT+GGG | + | chr7_1:65569874-65569893 | Msa1031140:intron | 40.0% |
| CTATGTCACCCAAGTGAAAT+CGG | - | chr7_1:65569885-65569904 | None:intergenic | 40.0% | |
| ! | CACTTAGGTGACATAGCTTT+TGG | - | chr7_1:65570022-65570041 | None:intergenic | 40.0% |
| ! | ATATGGGCTACTGTCAAGAA+GGG | + | chr7_1:65570264-65570283 | Msa1031140:intron | 40.0% |
| AAAACGAGAGATTGCACTTC+TGG | - | chr7_1:65570433-65570452 | None:intergenic | 40.0% | |
| GTTGACATGGAAATACCTTG+GGG | - | chr7_1:65570526-65570545 | None:intergenic | 40.0% | |
| ! | ATTTTCTCAAGGGCTCTCAT+TGG | - | chr7_1:65570619-65570638 | None:intergenic | 40.0% |
| GAGAGCCCTTGAGAAAATAA+AGG | + | chr7_1:65570621-65570640 | Msa1031140:intron | 40.0% | |
| !!! | CACGTCCCTTTATTTTCTCA+AGG | - | chr7_1:65570630-65570649 | None:intergenic | 40.0% |
| TGAGAAAATAAAGGGACGTG+TGG | + | chr7_1:65570630-65570649 | Msa1031140:intron | 40.0% | |
| AACTCCTTACGGTGACATTT+GGG | + | chr7_1:65570831-65570850 | Msa1031140:intron | 40.0% | |
| AGATAGGAACGTCTATAAGC+AGG | - | chr7_1:65571020-65571039 | None:intergenic | 40.0% | |
| ACACCAAAGCATGCTAACAT+AGG | + | chr7_1:65571080-65571099 | Msa1031140:intron | 40.0% | |
| CACCAAAGCATGCTAACATA+GGG | + | chr7_1:65571081-65571100 | Msa1031140:intron | 40.0% | |
| ACCAAAGCATGCTAACATAG+GGG | + | chr7_1:65571082-65571101 | Msa1031140:intron | 40.0% | |
| CTTCCAGATGTATTAGGTCT+AGG | + | chr7_1:65571127-65571146 | Msa1031140:intron | 40.0% | |
| AAGGCTCAGAAGATACTAGA+AGG | - | chr7_1:65571472-65571491 | None:intergenic | 40.0% | |
| TTCTAGTATCTTCTGAGCCT+TGG | + | chr7_1:65571471-65571490 | Msa1031140:intron | 40.0% | |
| ATACAAACTGGACTTGCATG+AGG | - | chr7_1:65571541-65571560 | None:intergenic | 40.0% | |
| ACTGTTGGACGGTGTAAAAT+GGG | + | chr7_1:65571812-65571831 | Msa1031140:CDS | 40.0% | |
| ATAGCTCAGAATGTTGACAC+AGG | + | chr7_1:65571858-65571877 | Msa1031140:CDS | 40.0% | |
| TAGCTCAGAATGTTGACACA+GGG | + | chr7_1:65571859-65571878 | Msa1031140:CDS | 40.0% | |
| AGAAGATATGGTTGTAGCCA+CGG | - | chr7_1:65571919-65571938 | None:intergenic | 40.0% | |
| TGGCTACAACCATATCTTCT+CGG | + | chr7_1:65571919-65571938 | Msa1031140:CDS | 40.0% | |
| TACAACCATATCTTCTCGGA+AGG | + | chr7_1:65571923-65571942 | Msa1031140:CDS | 40.0% | |
| ATTATTGGAGGTCTCTCCTT+TGG | - | chr7_1:65571985-65572004 | None:intergenic | 40.0% | |
| ATATACCTTGGGAAACCTGA+TGG | + | chr7_1:65572171-65572190 | Msa1031140:CDS | 40.0% | |
| TATACCTTGGGAAACCTGAT+GGG | + | chr7_1:65572172-65572191 | Msa1031140:CDS | 40.0% | |
| ! | TCCTGTTTTCCTGTAGAGAA+AGG | + | chr7_1:65572299-65572318 | Msa1031140:intron | 40.0% |
| !! | ATTGGTTTGGTATCTGCTAC+AGG | + | chr7_1:65572336-65572355 | Msa1031140:intron | 40.0% |
| GCAGAGGTAGTAGAAGAAAA+CGG | + | chr7_1:65572424-65572443 | Msa1031140:CDS | 40.0% | |
| AAGAAAACGGAAAGCCTTCA+TGG | + | chr7_1:65572437-65572456 | Msa1031140:CDS | 40.0% | |
| AATAACCGCTTTGTCCATGA+AGG | - | chr7_1:65572454-65572473 | None:intergenic | 40.0% | |
| !! | AGTTGCTGTGCTCTAAAATC+AGG | + | chr7_1:65572485-65572504 | Msa1031140:CDS | 40.0% |
| !! | CTGTGCTCTAAAATCAGGTT+GGG | + | chr7_1:65572490-65572509 | Msa1031140:intron | 40.0% |
| TCTTTCTACTTGCAGAGAAG+AGG | + | chr7_1:65572743-65572762 | Msa1031140:intron | 40.0% | |
| TGATGTACTCTATCATGCCA+TGG | + | chr7_1:65572830-65572849 | Msa1031140:CDS | 40.0% | |
| ! | AAGAAGTTTTGCAGGTTCTG+AGG | + | chr7_1:65572883-65572902 | Msa1031140:CDS | 40.0% |
| ! | CTTTTCCTCAATACCAGACT+TGG | - | chr7_1:65572919-65572938 | None:intergenic | 40.0% |
| !! | TCATTGTTCCACCGATTTCT+GGG | - | chr7_1:65572955-65572974 | None:intergenic | 40.0% |
| !! | TTCATTGTTCCACCGATTTC+TGG | - | chr7_1:65572956-65572975 | None:intergenic | 40.0% |
| AACAACTCGTCTTGTACATC+TGG | - | chr7_1:65573034-65573053 | None:intergenic | 40.0% | |
| GACGAGTTGTTACCATGAAT+AGG | + | chr7_1:65573043-65573062 | Msa1031140:three_prime_UTR | 40.0% | |
| CGAGTTGTTACCATGAATAG+GGG | + | chr7_1:65573045-65573064 | Msa1031140:three_prime_UTR | 40.0% | |
| ACTCGTATCCTCTTGTAATG+TGG | + | chr7_1:65573164-65573183 | Msa1031140:three_prime_UTR | 40.0% | |
| TGGCGTGCAAGTCATAAATG+TGG | - | chr7_1:65569138-65569157 | None:intergenic | 45.0% | |
| GCTATAGCACTGTTGTGTAG+CGG | - | chr7_1:65569442-65569461 | None:intergenic | 45.0% | |
| ! | TTGTGAAGTACCAGCTATGG+TGG | - | chr7_1:65569466-65569485 | None:intergenic | 45.0% |
| CCCACAGCGTTAGTTAGTTA+TGG | + | chr7_1:65569724-65569743 | Msa1031140:intron | 45.0% | |
| ! | ATTGAACCATAGAGTGGGCT+AGG | + | chr7_1:65570144-65570163 | Msa1031140:intron | 45.0% |
| TAAACGGTGTGCATTAAGGC+TGG | - | chr7_1:65570213-65570232 | None:intergenic | 45.0% | |
| CTTCTTGACAGTAGCCCATA+TGG | - | chr7_1:65570265-65570284 | None:intergenic | 45.0% | |
| ! | CATATGGGCTACTGTCAAGA+AGG | + | chr7_1:65570263-65570282 | Msa1031140:intron | 45.0% |
| !! | CAAAGTCAAGTGGCTCTAAG+AGG | + | chr7_1:65570351-65570370 | Msa1031140:five_prime_UTR | 45.0% |
| GGATTGAAGCATGTGAACGT+TGG | - | chr7_1:65570399-65570418 | None:intergenic | 45.0% | |
| ! | ATTGCACTTCTGGAAACCTC+TGG | - | chr7_1:65570423-65570442 | None:intergenic | 45.0% |
| ! | AATCTCTCGTTTTCCAGCCA+TGG | + | chr7_1:65570440-65570459 | Msa1031140:CDS | 45.0% |
| AGAAGCAAAAGCCAAGTGGT+TGG | - | chr7_1:65570489-65570508 | None:intergenic | 45.0% | |
| GCATAGAAGCAAAAGCCAAG+TGG | - | chr7_1:65570493-65570512 | None:intergenic | 45.0% | |
| CAACTCCTTACGGTGACATT+TGG | + | chr7_1:65570830-65570849 | Msa1031140:intron | 45.0% | |
| AACGTCTATAAGCAGGATGG+TGG | - | chr7_1:65571013-65571032 | None:intergenic | 45.0% | |
| AGGAACGTCTATAAGCAGGA+TGG | - | chr7_1:65571016-65571035 | None:intergenic | 45.0% | |
| TCCCCTATGTTAGCATGCTT+TGG | - | chr7_1:65571086-65571105 | None:intergenic | 45.0% | |
| !!! | GGGGCAACCATTTAGTTTTG+TGG | + | chr7_1:65571575-65571594 | Msa1031140:intron | 45.0% |
| TTGTCAGGTAGACTCACTGT+TGG | + | chr7_1:65571797-65571816 | Msa1031140:intron | 45.0% | |
| CACTGTTGGACGGTGTAAAA+TGG | + | chr7_1:65571811-65571830 | Msa1031140:CDS | 45.0% | |
| GGATGATAAAGGTTTGGCTG+TGG | + | chr7_1:65571833-65571852 | Msa1031140:CDS | 45.0% | |
| AGCTCAGAATGTTGACACAG+GGG | + | chr7_1:65571860-65571879 | Msa1031140:CDS | 45.0% | |
| CTTTGCAAATAGAGAAGCCG+TGG | + | chr7_1:65571899-65571918 | Msa1031140:CDS | 45.0% | |
| GGAAGGCCACATTCTATAGT+CGG | + | chr7_1:65571940-65571959 | Msa1031140:CDS | 45.0% | |
| CCACATTCTATAGTCGGTCA+CGG | + | chr7_1:65571946-65571965 | Msa1031140:CDS | 45.0% | |
| GCCTTTCTCTACAGGAAAAC+AGG | - | chr7_1:65572303-65572322 | None:intergenic | 45.0% | |
| ! | TGGTATCTGCTACAGGTTGA+AGG | + | chr7_1:65572343-65572362 | Msa1031140:intron | 45.0% |
| GAAAGCCTTCATGGACAAAG+CGG | + | chr7_1:65572446-65572465 | Msa1031140:CDS | 45.0% | |
| !! | GCTGTGCTCTAAAATCAGGT+TGG | + | chr7_1:65572489-65572508 | Msa1031140:intron | 45.0% |
| ! | CTATCATGCCATGGTTCTGT+TGG | + | chr7_1:65572839-65572858 | Msa1031140:CDS | 45.0% |
| CTTTAGTGCCAACAGAACCA+TGG | - | chr7_1:65572850-65572869 | None:intergenic | 45.0% | |
| ! | CATGGTTCTGTTGGCACTAA+AGG | + | chr7_1:65572848-65572867 | Msa1031140:CDS | 45.0% |
| AAGTCGCACAACCCAGAAAT+CGG | + | chr7_1:65572941-65572960 | Msa1031140:CDS | 45.0% | |
| GCTAGAGTTACCCCTATTCA+TGG | - | chr7_1:65573058-65573077 | None:intergenic | 45.0% | |
| !! | ATAGTTATTATAATATTATT+TGG | - | chr7_1:65573284-65573303 | None:intergenic | 5.0% |
| !! | ATTATAATAACTATTTATTA+TGG | + | chr7_1:65573290-65573309 | Msa1031140:three_prime_UTR | 5.0% |
| ! | ATGGGAGTGAAAGTGCAGCA+AGG | + | chr7_1:65569778-65569797 | Msa1031140:intron | 50.0% |
| ! | TGGGAGTGAAAGTGCAGCAA+GGG | + | chr7_1:65569779-65569798 | Msa1031140:intron | 50.0% |
| ! | TGTCACCTAAGTGCTACTCG+TGG | + | chr7_1:65570029-65570048 | Msa1031140:intron | 50.0% |
| GCTATCCACGAGTAGCACTT+AGG | - | chr7_1:65570037-65570056 | None:intergenic | 50.0% | |
| TTGGTCCTGTAACCGCATCT+GGG | - | chr7_1:65570470-65570489 | None:intergenic | 50.0% | |
| TATGCACACATCTGACCCCA+AGG | + | chr7_1:65570508-65570527 | Msa1031140:CDS | 50.0% | |
| CAAGCCCAAATGTCACCGTA+AGG | - | chr7_1:65570838-65570857 | None:intergenic | 50.0% | |
| !! | GATGGTGGAGGTCACATGTT+AGG | - | chr7_1:65570998-65571017 | None:intergenic | 50.0% |
| ! | GTCTATAAGCAGGATGGTGG+AGG | - | chr7_1:65571010-65571029 | None:intergenic | 50.0% |
| CAGGTAGACTCACTGTTGGA+CGG | + | chr7_1:65571801-65571820 | Msa1031140:intron | 50.0% | |
| ACAGGGGCAATACTGATGCA+AGG | + | chr7_1:65571876-65571895 | Msa1031140:CDS | 50.0% | |
| TGTGGCCTTCCGAGAAGATA+TGG | - | chr7_1:65571931-65571950 | None:intergenic | 50.0% | |
| CCGTGACCGACTATAGAATG+TGG | - | chr7_1:65571949-65571968 | None:intergenic | 50.0% | |
| !! | TGTTGCTGGCCTTTCTCTAC+AGG | - | chr7_1:65572311-65572330 | None:intergenic | 50.0% |
| GTCAACAATATCCCAGCGCA+AGG | + | chr7_1:65572402-65572421 | Msa1031140:CDS | 50.0% | |
| ! | AGGCAGCGATTTTCCAAGTC+TGG | + | chr7_1:65572903-65572922 | Msa1031140:CDS | 50.0% |
| TGCTATAGCGCCACCATAGC+TGG | + | chr7_1:65569453-65569472 | Msa1031140:intron | 55.0% | |
| ! | GAAAGTGCAGCAAGGGCAAC+TGG | + | chr7_1:65569786-65569805 | Msa1031140:intron | 55.0% |
| GGATTGCCTAGCCCACTCTA+TGG | - | chr7_1:65570153-65570172 | None:intergenic | 55.0% | |
| ! | GTGCATTAAGGCTGGCCCAT+AGG | - | chr7_1:65570205-65570224 | None:intergenic | 55.0% |
| TGGGCTACTGTCAAGAAGGG+TGG | + | chr7_1:65570267-65570286 | Msa1031140:intron | 55.0% | |
| GGGTGGCTCAGCTCATATTG+AGG | + | chr7_1:65570284-65570303 | Msa1031140:intron | 55.0% | |
| CACATGCTTCAATCCGCCAG+AGG | + | chr7_1:65570404-65570423 | Msa1031140:CDS | 55.0% | |
| ! | GCACTTCTGGAAACCTCTGG+CGG | - | chr7_1:65570420-65570439 | None:intergenic | 55.0% |
| AGCCATGGCTATCCCAGATG+CGG | + | chr7_1:65570455-65570474 | Msa1031140:CDS | 55.0% | |
| ! | AACCGCATCTGGGATAGCCA+TGG | - | chr7_1:65570460-65570479 | None:intergenic | 55.0% |
| GCTATCCCAGATGCGGTTAC+AGG | + | chr7_1:65570462-65570481 | Msa1031140:CDS | 55.0% | |
| GTTGGTCCTGTAACCGCATC+TGG | - | chr7_1:65570471-65570490 | None:intergenic | 55.0% | |
| CGGTTACAGGACCAACCACT+TGG | + | chr7_1:65570475-65570494 | Msa1031140:CDS | 55.0% | |
| CGGTCATCGTTGTGGACCAA+AGG | + | chr7_1:65571966-65571985 | Msa1031140:CDS | 55.0% | |
| TAGGCCCATCAGGTTTCCCA+AGG | - | chr7_1:65572179-65572198 | None:intergenic | 55.0% | |
| ! | AGCATGTTTCTGCCCCTGTG+TGG | - | chr7_1:65572206-65572225 | None:intergenic | 55.0% |
| AATATCCCAGCGCAAGGCAG+AGG | + | chr7_1:65572408-65572427 | Msa1031140:CDS | 55.0% | |
| TACTACCTCTGCCTTGCGCT+GGG | - | chr7_1:65572416-65572435 | None:intergenic | 55.0% | |
| GTCACGCACTGCTTCAGAGA+TGG | + | chr7_1:65572806-65572825 | Msa1031140:CDS | 55.0% | |
| TCGCACAACCCAGAAATCGG+TGG | + | chr7_1:65572944-65572963 | Msa1031140:CDS | 55.0% | |
| ! | GCATCTGGGATAGCCATGGC+TGG | - | chr7_1:65570456-65570475 | None:intergenic | 60.0% |
| GTCGGTCACGGTCATCGTTG+TGG | + | chr7_1:65571958-65571977 | Msa1031140:CDS | 60.0% | |
| ATGGGCCTACCTGCCACACA+GGG | + | chr7_1:65572190-65572209 | Msa1031140:CDS | 60.0% | |
| ! | TGTTTCTGCCCCTGTGTGGC+AGG | - | chr7_1:65572202-65572221 | None:intergenic | 60.0% |
| CTACTACCTCTGCCTTGCGC+TGG | - | chr7_1:65572417-65572436 | None:intergenic | 60.0% | |
| GTGTGGCAGGTAGGCCCATC+AGG | - | chr7_1:65572189-65572208 | None:intergenic | 65.0% | |
| GATGGGCCTACCTGCCACAC+AGG | + | chr7_1:65572189-65572208 | Msa1031140:CDS | 65.0% | |
| TGGGCCTACCTGCCACACAG+GGG | + | chr7_1:65572191-65572210 | Msa1031140:CDS | 65.0% | |
| TCTGCCCCTGTGTGGCAGGT+AGG | - | chr7_1:65572198-65572217 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 65568935 | 65573322 | 65568935 | ID=Msa1031140;Name=Msa1031140 |
| chr7_1 | mRNA | 65568935 | 65573322 | 65568935 | ID=Msa1031140-mRNA-1;Parent=Msa1031140;Name=Msa1031140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=152|0.8|0.83|1|0.8|0.66|6|348|288 |
| chr7_1 | exon | 65568935 | 65569048 | 65568935 | ID=Msa1031140-mRNA-1:exon:14563;Parent=Msa1031140-mRNA-1 |
| chr7_1 | exon | 65570348 | 65570529 | 65570348 | ID=Msa1031140-mRNA-1:exon:14564;Parent=Msa1031140-mRNA-1 |
| chr7_1 | exon | 65571804 | 65572064 | 65571804 | ID=Msa1031140-mRNA-1:exon:14565;Parent=Msa1031140-mRNA-1 |
| chr7_1 | exon | 65572168 | 65572263 | 65572168 | ID=Msa1031140-mRNA-1:exon:14566;Parent=Msa1031140-mRNA-1 |
| chr7_1 | exon | 65572358 | 65572506 | 65572358 | ID=Msa1031140-mRNA-1:exon:14567;Parent=Msa1031140-mRNA-1 |
| chr7_1 | exon | 65572758 | 65573322 | 65572758 | ID=Msa1031140-mRNA-1:exon:14568;Parent=Msa1031140-mRNA-1 |
| chr7_1 | five_prime_UTR | 65568935 | 65569048 | 65568935 | ID=Msa1031140-mRNA-1:five_prime_utr;Parent=Msa1031140-mRNA-1 |
| chr7_1 | five_prime_UTR | 65570348 | 65570385 | 65570348 | ID=Msa1031140-mRNA-1:five_prime_utr;Parent=Msa1031140-mRNA-1 |
| chr7_1 | CDS | 65570386 | 65570529 | 65570386 | ID=Msa1031140-mRNA-1:cds;Parent=Msa1031140-mRNA-1 |
| chr7_1 | CDS | 65571804 | 65572064 | 65571804 | ID=Msa1031140-mRNA-1:cds;Parent=Msa1031140-mRNA-1 |
| chr7_1 | CDS | 65572168 | 65572263 | 65572168 | ID=Msa1031140-mRNA-1:cds;Parent=Msa1031140-mRNA-1 |
| chr7_1 | CDS | 65572358 | 65572506 | 65572358 | ID=Msa1031140-mRNA-1:cds;Parent=Msa1031140-mRNA-1 |
| chr7_1 | CDS | 65572758 | 65572974 | 65572758 | ID=Msa1031140-mRNA-1:cds;Parent=Msa1031140-mRNA-1 |
| chr7_1 | three_prime_UTR | 65572975 | 65573322 | 65572975 | ID=Msa1031140-mRNA-1:three_prime_utr;Parent=Msa1031140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
